Spo23886 (gene) | SpinachBase

Overview


Name	Spo23886
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cyclin family protein
Location	Super_scaffold_133 : 2213612 .. 2216530 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATAAGAATCATAAGATGGCATTTCAATTTTTGAAACAAAAACCAAATCCACGACTTTGCCTTTATACCCCAACCTCAAATAACTGCTAGCCCTTTGAATCACTTCAAGAATCAAAAAAATTAATCCAAACTTTGGGTGTTTTTAATCTAAAACATAGCTTAATTAGGCTTGTTTATATGGCAAATTTCAACACCAAACTTAGAAATTCAGAGCTTTATTCTACTCTAGGATTATTAGATAAGTTACCACTTGAAGAAGAAGAATCAGAAAAACCTCCTCAAGTTGTGTTACTAATAGCATATGTTCTTGAAAAGAACATTCAAAAGAATGACAAGTTGTTGAAGAAGTCGAAAACAAAAGACGGGGTGACTATATTTCACGGCTCCAAAGCGCCTACGTTGAACATCCGGCAATATATTGAACGAGTATTCAAGTACTCGAAATGCAGCCCGTCTTGCTTTGTTGTTGCGTACATTTACATGGATAAGTTTATTCGAGCTACAACTTGTTATCTTACTTCCCTCAACGCTCACCGCCTTTTCATTGCTTCTGTTATGGTTGCTACCAAATTTATTGAAGACGTGTAAGTCAAACTACCACTCTAACTTCTATTTTCTGATACTCTTTCTGTTTTAGTTTCCCTTCTAATAATGGCATGTTATTTTGCTAGATTATGCTGTTTTTTATGCCAATTTTAGTGTCAGATTATGTTAATCTGTTCTTTAATAGGTTCTGTAAACAGCTTTTGCTTTACTAACCAGAAAATGATCGACTTTAGATTTGAAACACTTTCTATTTCATATTTCGAGTTGATCAGAAAACAACTCGGAAATCTACCTATGTCAGAAACTGAATTCACCAGACCCAAAAACAACCTGACCAACTGTTTTGAAAAGTTTCTCTTCACATGCCACTCTATAGGTGGCAAGAGATTGAGCAGGAACACAATACGAGTGTGTTCTATTCACTGAATTTCACATATTTTTCCTAGACCCTTATCAAAATTTATTTAGTTATAAATTATACTTAACTGCATAATCCACCCTTATTTTTCCTGAACTTATGTTATCTGAACTTACTTTTCCGAAAATAAGTGAAAAGTACGATAAACAATGGCTGTGCCGATTTTTGAAAATCTGACATGGAATGTAACGCCTTGTAGCTTCCTTCACTCTGGCCTAGTTGGCCCTATCATCTCTTCCAACAGATGAACGTCCTTATGTTAGAATTAATGGTTCTACTCCAAACATCAGTAATGGTTGGAGGTAATTATTCAGTGTTATGGTGTTGCTGAGCTTATGAAAACAACTCTTCTAAACTCTCAATCTTTAACTAACTTCATCCAACCGGGAATTAATGTTACATTCCCCATTAAGGACATCGACATGATTTTACAACCAATTATAGTAGTAGTGTCGTTGATTTTTGCCTTTACCTGAAGTACTGATAATACTTAACCAAAAATGCAGGACATACAACAATTCATATTATGCCAAAGTTGGAGGAGTTAGCATAGCAGAAATGAACAAGCTAGAGTTGAAGCTTTTACGCAGCCTCAACTACAGGCTGCACGTCACAGTAGAGACGTTTGATCAGTATTGTCAACAGTTGGAGAAGACAGCAGGATCTTGGAATGAGAGAAGTTTCCATAAAGAACGGGCAACGCAAACCTGTGGCTTAAAAGGTAGCTGGCTGAAGAAAGATGAGTCTAAATGTGCTCCGAAATTTGCAGGATATACCTGCGGAGCCATATAGTTAAACCACTCCTACATACTAATATCCCTCTAAGTATGGGGATCTTGAAGATCTTAATCTACACAGACAAACAAACAGTTGTCTATTTCTTCAAAACCAAATTTACAATAGGTCTTCCTTCCAGTCTTTTTGACAAAATTTGTTCATGTTCTCAGTCATGAAATTCCGATCAGTTAATCTGGTTGTCAGGTCTAAAGAGAATCTATCAAGTGATCTCTGTCATTGAAGGAGACCCTTAAAGTTAAATGTTATTTTGAGTGAAGATTGCGTCCGATGAATACAAATCTATATTGCTACGACAATACAACACACTGCTACTGGACAGTGCAAACAATTTTTCAAGTATCTTACTAATAATTTTAATTTATTGCACATATTGTGCACAAAAACACTAAATTTAAATCACTATACACTACCAGAAAACCCTTGCATCCAAGATTCAAATCCTGAACCCTTATCAAAGATTTGATGAGCTACAACAGAACAATGGGTGTGGGTCTATAAATGTCTGGCGTTGAGTAACCCATTTCTAGGCCCCAAGAGGGTAGCGAGGAGGAAAAACAACTCCCACATGGACTTCTCTATAATTTTCTCAGTTGGAGCTGTTTCTCCTTGCTGCATAAGTACGATAAACCGCCAATCCGGCGAAAACAACAGCTACTCCAACTGTAAAAGTAAAAATCATATAAACCAGGTTCAGTAAACAAGTATAACCTGTGCAATTGAAACACACAGCAACAAATTCATCGAGGATTATCCCCGGGAATCAAACACCCACCATCCCAAACACAAGTTTGCTCAGGCACTAGCCATCAATTTCAAGATGCTGAGTTAAAATGTCATTACATGAAAGTAAATCTGTTGAACTGATACATAGACACATTCAGGACATGGTGAACCAGAGGAATGACGTGACATTTCCATTATCTCAAGCTCATTCAAGATCTAATGTTTCATATTTGGAGAATCTAAGAAGACAGCATAATGACATGTTTGGTTGGAAAATGTGAAGATTTACTAGACATTTTTTCAGGGCTCCCTTTCAGGAAATTTTATAAAATAGAGCAATATATTTGATTACAGAAGCTGCATGGCCGGAAAAGATATCATAATAAAAAGTTCCTTCCTAATGCATTATTCATTTATTAGCTACACAG

mRNA sequence

ATGAAAGATAAGAATCATAAGATGGCATTTCAATTTTTGAAACAAAAACCAAATCCACGACTTTGCCTTTATACCCCAACCTCAAATAACTGCTAGCCCTTTGAATCACTTCAAGAATCAAAAAAATTAATCCAAACTTTGGGTGTTTTTAATCTAAAACATAGCTTAATTAGGCTTGTTTATATGGCAAATTTCAACACCAAACTTAGAAATTCAGAGCTTTATTCTACTCTAGGATTATTAGATAAGTTACCACTTGAAGAAGAAGAATCAGAAAAACCTCCTCAAGTTGTGTTACTAATAGCATATGTTCTTGAAAAGAACATTCAAAAGAATGACAAGTTGTTGAAGAAGTCGAAAACAAAAGACGGGGTGACTATATTTCACGGCTCCAAAGCGCCTACGTTGAACATCCGGCAATATATTGAACGAGTATTCAAGTACTCGAAATGCAGCCCGTCTTGCTTTGTTGTTGCGTACATTTACATGGATAAGTTTATTCGAGCTACAACTTGTTATCTTACTTCCCTCAACGCTCACCGCCTTTTCATTGCTTCTGTTATGGTTGCTACCAAATTTATTGAAGACGTGACATACAACAATTCATATTATGCCAAAGTTGGAGGAGTTAGCATAGCAGAAATGAACAAGCTAGAGTTGAAGCTTTTACGCAGCCTCAACTACAGGCTGCACGTCACAGTAGAGACGTTTGATCAGTATTGTCAACAGTTGGAGAAGACAGCAGGATCTTGGAATGAGAGAAGTTTCCATAAAGAACGGGCAACGCAAACCTGTGGCTTAAAAGGTAGCTGGCTGAAGAAAGATGAGTCTAAATGTGCTCCGAAATTTGCAGGATATACCTGCGGAGCCATATAGTTAAACCACTCCTACATACTAATATCCCTCTAAGTATGGGGATCTTGAAGATCTTAATCTACACAGACAAACAAACAGTTGTCTATTTCTTCAAAACCAAATTTACAATAGGTCTTCCTTCCAGTCTTTTTGACAAAATTTGTTCATGTTCTCAGTCATGAAATTCCGATCAGTTAATCTGGTTGTCAGGTCTAAAGAGAATCTATCAAGTGATCTCTGTCATTGAAGGAGACCCTTAAAGTTAAATGTTATTTTGAGTGAAGATTGCGTCCGATGAATACAAATCTATATTGCTACGACAATACAACACACTGCTACTGGACAGTGCAAACAATTTTTCAAGTATCTTACTAATAATTTTAATTTATTGCACATATTGTGCACAAAAACACTAAATTTAAATCACTATACACTACCAGAAAACCCTTGCATCCAAGATTCAAATCCTGAACCCTTATCAAAGATTTGATGAGCTACAACAGAACAATGGGTGTGGGTCTATAAATGTCTGGCGTTGAGTAACCCATTTCTAGGCCCCAAGAGGGTAGCGAGGAGGAAAAACAACTCCCACATGGACTTCTCTATAATTTTCTCAGTTGGAGCTGTTTCTCCTTGCTGCATAAGTACGATAAACCGCCAATCCGGCGAAAACAACAGCTACTCCAACTGTAAAAGTAAAAATCATATAAACCAGGTTCAGTAAACAAGTATAACCTGTGCAATTGAAACACACAGCAACAAATTCATCGAGGATTATCCCCGGGAATCAAACACCCACCATCCCAAACACAAGTTTGCTCAGGCACTAGCCATCAATTTCAAGATGCTGAGTTAAAATGTCATTACATGAAAGTAAATCTGTTGAACTGATACATAGACACATTCAGGACATGGTGAACCAGAGGAATGACGTGACATTTCCATTATCTCAAGCTCATTCAAGATCTAATGTTTCATATTTGGAGAATCTAAGAAGACAGCATAATGACATGTTTGGTTGGAAAATGTGAAGATTTACTAGACATTTTTTCAGGGCTCCCTTTCAGGAAATTTTATAAAATAGAGCAATATATTTGATTACAGAAGCTGCATGGCCGGAAAAGATATCATAATAAAAAGTTCCTTCCTAATGCATTATTCATTTATTAGCTACACAG

Coding sequence (CDS)

ATGGCAAATTTCAACACCAAACTTAGAAATTCAGAGCTTTATTCTACTCTAGGATTATTAGATAAGTTACCACTTGAAGAAGAAGAATCAGAAAAACCTCCTCAAGTTGTGTTACTAATAGCATATGTTCTTGAAAAGAACATTCAAAAGAATGACAAGTTGTTGAAGAAGTCGAAAACAAAAGACGGGGTGACTATATTTCACGGCTCCAAAGCGCCTACGTTGAACATCCGGCAATATATTGAACGAGTATTCAAGTACTCGAAATGCAGCCCGTCTTGCTTTGTTGTTGCGTACATTTACATGGATAAGTTTATTCGAGCTACAACTTGTTATCTTACTTCCCTCAACGCTCACCGCCTTTTCATTGCTTCTGTTATGGTTGCTACCAAATTTATTGAAGACGTGACATACAACAATTCATATTATGCCAAAGTTGGAGGAGTTAGCATAGCAGAAATGAACAAGCTAGAGTTGAAGCTTTTACGCAGCCTCAACTACAGGCTGCACGTCACAGTAGAGACGTTTGATCAGTATTGTCAACAGTTGGAGAAGACAGCAGGATCTTGGAATGAGAGAAGTTTCCATAAAGAACGGGCAACGCAAACCTGTGGCTTAAAAGGTAGCTGGCTGAAGAAAGATGAGTCTAAATGTGCTCCGAAATTTGCAGGATATACCTGCGGAGCCATATAG

Protein sequence

MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEKTAGSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTCGAI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23886.1	Spo23886.1	mRNA

Homology

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BLAST of Spo23886.1 vs. NCBI nr
Match: gi|902150962|gb|KNA05471.1| (hypothetical protein SOVF_190010 [Spinacia oleracea])

HSP 1 Score: 397.1 bits (1019), Expect = 2.100e-107
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1

		  
Query: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT 60
           MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT
Sbjct: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT 60

Query: 61  KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR 120
           KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR
Sbjct: 61  KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR 120

Query: 121 LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC 180
           LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC
Sbjct: 121 LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC 180

Query: 181 QQLEKTAGSWNERSFHKERAT 202
           QQLEKTAGSWNERSFHKERAT
Sbjct: 181 QQLEKTAGSWNERSFHKERAT 201

[Close]

BLAST of Spo23886.1 vs. NCBI nr
Match: gi|731327892|ref|XP_010674760.1| (PREDICTED: cyclin-P3-1 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 344.0 bits (881), Expect = 2.100e-91
Identity = 177/231 (76.62%), Postives = 199/231 (86.15%), Query Frame = 1

		  
Query: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKK-SK 60
           M  FNTK  N ELY+TLG LDK P++E+E EKPPQV+  IA +LEK IQKN KLLK+ S+
Sbjct: 1   MGTFNTKTTNLELYTTLG-LDKSPIKEDEPEKPPQVISFIASILEKTIQKNGKLLKRSSR 60

Query: 61  TKDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAH 120
           +KD VTI+HG KAPTL+IRQYIERVFKYSKCSPSCFVVAYIYMDKFI+AT CYLTSLN H
Sbjct: 61  SKDNVTIYHGIKAPTLSIRQYIERVFKYSKCSPSCFVVAYIYMDKFIQATKCYLTSLNVH 120

Query: 121 RLFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQY 180
           RL IA V+VATKFIEDV+YNN+Y+AKVGGVSIAEMNKLE+KLLRSL+YRLHVT+E FDQY
Sbjct: 121 RLLIACVLVATKFIEDVSYNNAYFAKVGGVSIAEMNKLEMKLLRSLDYRLHVTLELFDQY 180

Query: 181 CQQLEKTAGSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTCGAI 231
           C QLEK AG  +ER    ERATQ+CG KGSWLKKDE+KC PKF GYTCGAI
Sbjct: 181 CLQLEK-AGGGSER---VERATQSCGFKGSWLKKDETKCNPKFGGYTCGAI 226

[Close]

BLAST of Spo23886.1 vs. NCBI nr
Match: gi|731327890|ref|XP_010674759.1| (PREDICTED: cyclin-P3-1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 335.1 bits (858), Expect = 9.600e-89
Identity = 173/227 (76.21%), Postives = 195/227 (85.90%), Query Frame = 1

		  
Query: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKK-SK 60
           M  FNTK  N ELY+TLG LDK P++E+E EKPPQV+  IA +LEK IQKN KLLK+ S+
Sbjct: 1   MGTFNTKTTNLELYTTLG-LDKSPIKEDEPEKPPQVISFIASILEKTIQKNGKLLKRSSR 60

Query: 61  TKDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAH 120
           +KD VTI+HG KAPTL+IRQYIERVFKYSKCSPSCFVVAYIYMDKFI+AT CYLTSLN H
Sbjct: 61  SKDNVTIYHGIKAPTLSIRQYIERVFKYSKCSPSCFVVAYIYMDKFIQATKCYLTSLNVH 120

Query: 121 RLFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQY 180
           RL IA V+VATKFIEDV+YNN+Y+AKVGGVSIAEMNKLE+KLLRSL+YRLHVT+E FDQY
Sbjct: 121 RLLIACVLVATKFIEDVSYNNAYFAKVGGVSIAEMNKLEMKLLRSLDYRLHVTLELFDQY 180

Query: 181 CQQLEKTAGSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYT 227
           C QLEK AG  +ER    ERATQ+CG KGSWLKKDE+KC PKF GYT
Sbjct: 181 CLQLEK-AGGGSER---VERATQSCGFKGSWLKKDETKCNPKFGGYT 222

[Close]

BLAST of Spo23886.1 vs. NCBI nr
Match: gi|719972546|ref|XP_010277841.1| (PREDICTED: cyclin-P3-1-like [Nelumbo nucifera])

HSP 1 Score: 248.8 bits (634), Expect = 9.000e-63
Identity = 123/215 (57.21%), Postives = 160/215 (74.42%), Query Frame = 1

		  
Query: 13  LYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHGSKA 72
           LYS+LGL++     ++     P V+ L++ +LE+++QKN+KLL   K KD +TIFHG KA
Sbjct: 15  LYSSLGLIES----DKGIPGTPLVLPLLSSLLERSVQKNEKLLDSMKKKDAITIFHGLKA 74

Query: 73  PTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVMVATKF 132
           PT++IR+YI+R+FKYS C+PSCFVVAYIYMD+F++ T  YLTSLN HRL I +VM+A KF
Sbjct: 75  PTMSIRKYIDRIFKYSGCTPSCFVVAYIYMDRFLQQTDVYLTSLNVHRLLITAVMLAVKF 134

Query: 133 IEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEKTAGSWNE 192
           +EDV YNN+YYA+VGG++IAEMN++E+K L SL +RLHVT ETF  YC QLEK A +   
Sbjct: 135 VEDVYYNNAYYARVGGITIAEMNRMEMKFLFSLEFRLHVTTETFKSYCLQLEKEAAA--- 194

Query: 193 RSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTC 228
             +  ER  Q CGLK SW  KDE KCA   A Y+C
Sbjct: 195 -EYKIERPIQVCGLKESWPNKDEPKCATTIARYSC 221

[Close]

BLAST of Spo23886.1 vs. NCBI nr
Match: gi|720000238|ref|XP_010255964.1| (PREDICTED: cyclin-P3-1-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 235.3 bits (599), Expect = 1.000e-58
Identity = 122/218 (55.96%), Postives = 156/218 (71.56%), Query Frame = 1

		  
Query: 10  NSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHG 69
           +SELY  LG+ +      +      +++ L++ +LE+++QKN+KLL   K KD VT+FHG
Sbjct: 12  DSELYLALGVTES----GKGVTGTHRLLSLLSSLLERSVQKNEKLLDSMKKKDVVTVFHG 71

Query: 70  SKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVMVA 129
            +APTL+I QYI+R+FKYS CSPSCFVVAYIYMD+F++ T  YLTSLN HRL I SVMVA
Sbjct: 72  LRAPTLSIHQYIDRIFKYSSCSPSCFVVAYIYMDRFLQRTDIYLTSLNVHRLLITSVMVA 131

Query: 130 TKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEKTAGS 189
            KF++D  +NN+YYAKVGGVS+AEMN+LE+K L +L++RLHVTVETF  YC  LEK A  
Sbjct: 132 AKFLDDAFFNNAYYAKVGGVSLAEMNRLEMKFLFTLDFRLHVTVETFKSYCLLLEKEAAG 191

Query: 190 WNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTC 228
                +  ER  Q C LK SW KKDE K A   A Y+C
Sbjct: 192 ----GYKIERPIQVCRLKESWPKKDEPKHATTIARYSC 221

[Close]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190010 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.400e-107
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1

		  
Query: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT 60
           MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT
Sbjct: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKT 60

Query: 61  KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR 120
           KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR
Sbjct: 61  KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHR 120

Query: 121 LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC 180
           LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC
Sbjct: 121 LFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYC 180

Query: 181 QQLEKTAGSWNERSFHKERAT 202
           QQLEKTAGSWNERSFHKERAT
Sbjct: 181 QQLEKTAGSWNERSFHKERAT 201

[Close]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g081550 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.400e-91
Identity = 177/231 (76.62%), Postives = 199/231 (86.15%), Query Frame = 1

		  
Query: 1   MANFNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKK-SK 60
           M  FNTK  N ELY+TLG LDK P++E+E EKPPQV+  IA +LEK IQKN KLLK+ S+
Sbjct: 1   MGTFNTKTTNLELYTTLG-LDKSPIKEDEPEKPPQVISFIASILEKTIQKNGKLLKRSSR 60

Query: 61  TKDGVTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAH 120
           +KD VTI+HG KAPTL+IRQYIERVFKYSKCSPSCFVVAYIYMDKFI+AT CYLTSLN H
Sbjct: 61  SKDNVTIYHGIKAPTLSIRQYIERVFKYSKCSPSCFVVAYIYMDKFIQATKCYLTSLNVH 120

Query: 121 RLFIASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQY 180
           RL IA V+VATKFIEDV+YNN+Y+AKVGGVSIAEMNKLE+KLLRSL+YRLHVT+E FDQY
Sbjct: 121 RLLIACVLVATKFIEDVSYNNAYFAKVGGVSIAEMNKLEMKLLRSLDYRLHVTLELFDQY 180

Query: 181 CQQLEKTAGSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTCGAI 231
           C QLEK AG  +ER    ERATQ+CG KGSWLKKDE+KC PKF GYTCGAI
Sbjct: 181 CLQLEK-AGGGSER---VERATQSCGFKGSWLKKDETKCNPKFGGYTCGAI 226

[Close]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Match: F6HQ58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00540 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.700e-55
Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 1

		  
Query: 8   LRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIF 67
           +  S+LY  LGL +      +     P+V+LL++ +LE+++QKN+ LL+ ++ KD +TIF
Sbjct: 19  IAGSDLYLALGLKEL----GKGVIGTPRVLLLLSSLLERSVQKNETLLETAQIKDAITIF 78

Query: 68  HGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVM 127
           HGS+APTL++RQYI+R+FKYS CSPSCFVVA+IY+D+F++ T  +LTSLN HRL I SVM
Sbjct: 79  HGSRAPTLSVRQYIDRIFKYSGCSPSCFVVAHIYVDRFLQHTDAHLTSLNVHRLLITSVM 138

Query: 128 VATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEKTA 187
           VA KFI+D  +NN+YYAKVGGVS AE+N+LE+K L SL++RL VTVETF  YC QL+K  
Sbjct: 139 VAAKFIDDAFFNNAYYAKVGGVSTAELNRLEMKFLFSLDFRLQVTVETFRSYCSQLDKEV 198

Query: 188 GSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFA 224
                     ER  Q CG+K SW  K++S CA   A
Sbjct: 199 AG----GLQIERPFQACGIKESWSSKEDS-CASTIA 225

[Close]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Match: M0ZV82_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003451 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.400e-54
Identity = 110/226 (48.67%), Postives = 157/226 (69.47%), Query Frame = 1

		  
Query: 4   FNTKLRNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDG 63
           F TK  NS+ Y+ +GL +     +   +  P+++ ++A V+E+++QKN+K LK S  +  
Sbjct: 8   FGTKSVNSKTYTNMGLNEY----DRGDKGNPKILWIVASVVERSVQKNEKALKGSNKRGV 67

Query: 64  VTIFHGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFI 123
           VT+FHG++AP L ++QYIER+FKYS CSPSCFVVAYIY+++F+  T C LTSLN HRL I
Sbjct: 68  VTVFHGTRAPVLTVQQYIERIFKYSNCSPSCFVVAYIYLERFLNLTHCLLTSLNVHRLLI 127

Query: 124 ASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQL 183
            S+M+A KF++D  YNN+YYAKVGG++  E+NKLE+K L +L++RLHV+VE FD+YC QL
Sbjct: 128 TSIMLAVKFVDDDCYNNAYYAKVGGITTTELNKLEMKFLAALDFRLHVSVENFDKYCLQL 187

Query: 184 EKTAGSWNERSFHKERATQTCGLKGSWLKKDESKCAPKFAGYTCGA 230
           EK     NE+    +R  +        + K+ S C+P   GYTC A
Sbjct: 188 EKDT---NEK-LQIDRPIRIFAWGKGLVNKNISNCSPTVGGYTCRA 225

[Close]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Match: A0A068V4R6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015377001 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.400e-54
Identity = 111/198 (56.06%), Postives = 144/198 (72.73%), Query Frame = 1

		  
Query: 32  KPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERVFKYSKCS 91
           +PP+++ ++A  LEK+I KN+KLLK +  KD +TIFHG +AP L+IR+YIER+FKY+ CS
Sbjct: 31  EPPRILAILASTLEKSILKNEKLLKATNVKDVITIFHGLRAPELSIRRYIERIFKYANCS 90

Query: 92  PSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYAKVGGVSI 151
           PSCFVVAYIYM++F+  T  YLTSLNAHRL I   M+A KF+ED  YNN+YYAKVGG+S 
Sbjct: 91  PSCFVVAYIYMERFLHQTNGYLTSLNAHRLLITCFMLAAKFVEDECYNNAYYAKVGGIST 150

Query: 152 AEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEKTAGSWNERSFHKERATQTCGLKGSWL 211
            EMN+LE KL+ ++++RLHV+VETFD Y  +LE  A   +   +  ER  + CGL     
Sbjct: 151 TEMNRLETKLVVAIDFRLHVSVETFDDYSFRLEDEA---SREQYRIERPFRLCGLGKGSN 210

Query: 212 KKDESKCAPKFAGYTCGA 230
            KD S  APK AG TC A
Sbjct: 211 SKDGSGFAPKAAGCTCRA 225

[Close]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Match: CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.300e-45
Identity = 90/177 (50.85%), Postives = 132/177 (74.58%), Query Frame = 1

		  
Query: 9   RNSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFH 68
           ++ E Y +LGL   +   ++ + + P+V+LL+A  L++++QKN+ LL  +K KD  TIFH
Sbjct: 13  KHEESYLSLGLT--VSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFH 72

Query: 69  GSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVMV 128
           G +AP L+I+ Y ER+FKYS+CSPSCFV+A IYM+++++    Y+TSL+ HRL I SV+V
Sbjct: 73  GHRAPDLSIKLYAERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVV 132

Query: 129 ATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           A KF +D  +NN++YA+VGG+S  EMN+LEL LL +L++RL V +ETF  YC QLEK
Sbjct: 133 AAKFTDDAFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEK 187

[Close]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Match: CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 7.200e-36
Identity = 80/178 (44.94%), Postives = 121/178 (67.98%), Query Frame = 1

		  
Query: 10  NSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKN--DKLLKKSKTKDGVTIF 69
           +S++Y  LGL+    +E +  +KPP V+  ++  LE+++  N  DK+L  S   D VT+F
Sbjct: 12  DSDVYLRLGLI----IEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGS--PDSVTVF 71

Query: 70  HGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVM 129
            G   P ++I  Y++R+FKYS CSPSCFV+A+IY+D F+  T   L  LN HRL I +VM
Sbjct: 72  DGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVM 131

Query: 130 VATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           +A K  +D  +NN+YYA+VGGV+  E+N+LE++LL +L+++L V  +TF  +C QLEK
Sbjct: 132 LAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEK 183

[Close]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.600e-35
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 1

		  
Query: 29  ESEKPPQVVLLIAYV---LEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERVF 88
           E E P  +  LIA++   LE+  + ND   + +     V++FHG   PT+ I+ Y+ER+F
Sbjct: 3   ELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIF 62

Query: 89  KYSKCSPSCFVVAYIYMDKFI-RATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYA 148
           KY+ CSPSCFVVAY+Y+D+F  R  +  + S N HRL I SVMVA KF++D+ YNN+YYA
Sbjct: 63  KYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYA 122

Query: 149 KVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           KVGG+S  EMN LEL  L  L + L+VT  TF+ Y   L+K
Sbjct: 123 KVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQK 163

[Close]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.000e-35
Identity = 70/154 (45.45%), Postives = 112/154 (72.73%), Query Frame = 1

		  
Query: 34  PQVVLLIAYVLEKNIQKNDKLLKKSKT-KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSP 93
           P+V+ +I++V+EK + +N+ L K++K     +  FHG +AP+++I +Y+ER++KY+KCSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 94  SCFVVAYIYMDKFI-RATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYAKVGGVSI 153
           +CFVV Y+Y+D+   +     + SLN HRL +  VM+A K ++DV YNN +YA+VGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 154 AEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           A++NK+EL+LL  L++R+ V+   F+ YC  LEK
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEK 178

[Close]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Match: CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.000e-33
Identity = 72/162 (44.44%), Postives = 109/162 (67.28%), Query Frame = 1

		  
Query: 25  LEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERV 84
           L+E  +E  P V+  ++Y+L++  + ND L +K K       F G   P+++IR Y+ER+
Sbjct: 14  LQEPLAEIMPSVLTAMSYLLQRVSETNDNLSQKQKPSS----FTGVTKPSISIRSYLERI 73

Query: 85  FKYSKCSPSCFVVAYIYMDKFIRATTCY-LTSLNAHRLFIASVMVATKFIEDVTYNNSYY 144
           F+Y+ CS SC++VAYIY+D+F++      + S N HRL I SV+V+ KF++D++YNN YY
Sbjct: 74  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 133

Query: 145 AKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           AKVGG+S  EMN LEL  L  + + L+VTV TF+ YC  L++
Sbjct: 134 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQR 171

[Close]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Match: AT3G05327.1 (Cyclin family protein)

HSP 1 Score: 164.9 bits (416), Expect = 6.100e-41
Identity = 86/182 (47.25%), Postives = 124/182 (68.13%), Query Frame = 1

		  
Query: 10  NSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTK-DGVTIFH 69
           NS L+  LGLL+    ++     PP+V+ L+A  LEK IQKN K       K D +T+FH
Sbjct: 9   NSSLFQWLGLLEDS--DQPPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFH 68

Query: 70  GSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIR-----ATTCYLTSLNAHRLFI 129
           GSKAP+L+I +Y ER+ +Y++CSP CFV A+ Y+ ++++     +T   LTSLN HRL I
Sbjct: 69  GSKAPSLSIYRYTERIHRYAQCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLI 128

Query: 130 ASVMVATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQL 186
            S++VA KF+E   YNN+YYAK+GGVS  EMN+LE   L  +++RL++T ETF+++C  L
Sbjct: 129 TSLLVAAKFLERQCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLML 188

[Close]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Match: AT3G63120.1 (cyclin p1;1)

HSP 1 Score: 152.1 bits (383), Expect = 4.100e-37
Identity = 80/178 (44.94%), Postives = 121/178 (67.98%), Query Frame = 1

		  
Query: 10  NSELYSTLGLLDKLPLEEEESEKPPQVVLLIAYVLEKNIQKN--DKLLKKSKTKDGVTIF 69
           +S++Y  LGL+    +E +  +KPP V+  ++  LE+++  N  DK+L  S   D VT+F
Sbjct: 12  DSDVYLRLGLI----IEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGS--PDSVTVF 71

Query: 70  HGSKAPTLNIRQYIERVFKYSKCSPSCFVVAYIYMDKFIRATTCYLTSLNAHRLFIASVM 129
            G   P ++I  Y++R+FKYS CSPSCFV+A+IY+D F+  T   L  LN HRL I +VM
Sbjct: 72  DGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVM 131

Query: 130 VATKFIEDVTYNNSYYAKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           +A K  +D  +NN+YYA+VGGV+  E+N+LE++LL +L+++L V  +TF  +C QLEK
Sbjct: 132 LAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEK 183

[Close]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Match: AT2G44740.1 (cyclin p4;1)

HSP 1 Score: 151.0 bits (380), Expect = 9.000e-37
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 1

		  
Query: 29  ESEKPPQVVLLIAYV---LEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERVF 88
           E E P  +  LIA++   LE+  + ND   + +     V++FHG   PT+ I+ Y+ER+F
Sbjct: 3   ELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIF 62

Query: 89  KYSKCSPSCFVVAYIYMDKFI-RATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYA 148
           KY+ CSPSCFVVAY+Y+D+F  R  +  + S N HRL I SVMVA KF++D+ YNN+YYA
Sbjct: 63  KYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYA 122

Query: 149 KVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           KVGG+S  EMN LEL  L  L + L+VT  TF+ Y   L+K
Sbjct: 123 KVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQK 163

[Close]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Match: AT3G21870.1 (cyclin p2;1)

HSP 1 Score: 148.7 bits (374), Expect = 4.500e-36
Identity = 70/154 (45.45%), Postives = 112/154 (72.73%), Query Frame = 1

		  
Query: 34  PQVVLLIAYVLEKNIQKNDKLLKKSKT-KDGVTIFHGSKAPTLNIRQYIERVFKYSKCSP 93
           P+V+ +I++V+EK + +N+ L K++K     +  FHG +AP+++I +Y+ER++KY+KCSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 94  SCFVVAYIYMDKFI-RATTCYLTSLNAHRLFIASVMVATKFIEDVTYNNSYYAKVGGVSI 153
           +CFVV Y+Y+D+   +     + SLN HRL +  VM+A K ++DV YNN +YA+VGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 154 AEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           A++NK+EL+LL  L++R+ V+   F+ YC  LEK
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEK 178

[Close]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Match: AT5G61650.1 (CYCLIN P4;2)

HSP 1 Score: 144.1 bits (362), Expect = 1.100e-34
Identity = 72/162 (44.44%), Postives = 109/162 (67.28%), Query Frame = 1

		  
Query: 25  LEEEESEKPPQVVLLIAYVLEKNIQKNDKLLKKSKTKDGVTIFHGSKAPTLNIRQYIERV 84
           L+E  +E  P V+  ++Y+L++  + ND L +K K       F G   P+++IR Y+ER+
Sbjct: 14  LQEPLAEIMPSVLTAMSYLLQRVSETNDNLSQKQKPSS----FTGVTKPSISIRSYLERI 73

Query: 85  FKYSKCSPSCFVVAYIYMDKFIRATTCY-LTSLNAHRLFIASVMVATKFIEDVTYNNSYY 144
           F+Y+ CS SC++VAYIY+D+F++      + S N HRL I SV+V+ KF++D++YNN YY
Sbjct: 74  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 133

Query: 145 AKVGGVSIAEMNKLELKLLRSLNYRLHVTVETFDQYCQQLEK 186
           AKVGG+S  EMN LEL  L  + + L+VTV TF+ YC  L++
Sbjct: 134 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQR 171

The following BLAST results are available for this feature:

BLAST of Spo23886.1 vs. NCBI nr
BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
BLAST of Spo23886.1 vs. TAIR (Arabidopsis)

BLAST of Spo23886.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902150962\|gb\|KNA05471.1\|	2.1e-107	100.	hypothetical protein SOVF_1900...	[more]
gi\|731327892\|ref\|XP_010674760.1\|	2.1e-91	76.6	PREDICTED: cyclin-P3-1 isoform...	[more]
gi\|731327890\|ref\|XP_010674759.1\|	9.6e-89	76.2	PREDICTED: cyclin-P3-1 isoform...	[more]
gi\|719972546\|ref\|XP_010277841.1\|	9.0e-63	57.2	PREDICTED: cyclin-P3-1-like [N...	[more]
gi\|720000238\|ref\|XP_010255964.1\|	1.0e-58	55.9	PREDICTED: cyclin-P3-1-like is...	[more]

BLAST of Spo23886.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QFX3_SPIOL	1.4e-107	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CJA5_BETVU	1.4e-91	76.6	Uncharacterized protein OS=Bet...	[more]
F6HQ58_VITVI	1.7e-55	53.7	Putative uncharacterized prote...	[more]
M0ZV82_SOLTU	1.4e-54	48.6	Uncharacterized protein OS=Sol...	[more]
A0A068V4R6_COFCA	2.4e-54	56.0	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo23886.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
CCP31_ORYSJ	1.3e-45	50.8	Cyclin-P3-1 OS=Oryza sativa su...	[more]
CCU31_ARATH	7.2e-36	44.9	Cyclin-U3-1 OS=Arabidopsis tha...	[more]
CCU41_ARATH	1.6e-35	48.4	Cyclin-U4-1 OS=Arabidopsis tha...	[more]
CCU11_ARATH	8.0e-35	45.4	Cyclin-U1-1 OS=Arabidopsis tha...	[more]
CCU43_ARATH	2.0e-33	44.4	Cyclin-U4-3 OS=Arabidopsis tha...	[more]

BLAST of Spo23886.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G05327.1	6.1e-41	47.2	Cyclin family protein	[more]
AT3G63120.1	4.1e-37	44.9	cyclin p1;1	[more]
AT2G44740.1	9.0e-37	48.4	cyclin p4;1	[more]
AT3G21870.1	4.5e-36	45.4	cyclin p2;1	[more]
AT5G61650.1	1.1e-34	44.4	CYCLIN P4;2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	GENE3D	1.10.472.10		coord: 82..170 score: 1.
IPR013763	Cyclin-like	unknown	SSF47954	Cyclin-like	coord: 79..170 score: 6.5
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 59..169 score: 6.3
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 10..217 score: 7.8
None	No IPR available	PANTHER	PTHR15615:SF20	CYCLIN FAMILY PROTEIN-RELATED	coord: 10..217 score: 7.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0006535	cysteine biosynthetic process from serine
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0006508	proteolysis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0010200	response to chitin
biological_process	GO:0009620	response to fungus
biological_process	GO:1901679	nucleotide transmembrane transport
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007165	signal transduction
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0015696	ammonium transport
biological_process	GO:0043090	amino acid import
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0051510	regulation of unidimensional cell growth
biological_process	GO:0008380	RNA splicing
biological_process	GO:0032875	regulation of DNA endoreduplication
biological_process	GO:0051302	regulation of cell division
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0007276	gamete generation
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0009611	response to wounding
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009987	cellular process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0006810	transport
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0010048	vernalization response
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0048364	root development
biological_process	GO:0009749	response to glucose
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0044375	regulation of peroxisome size
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0031461	cullin-RING ubiquitin ligase complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005819	spindle
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005779	integral component of peroxisomal membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005768	endosome
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0009333	cysteine synthase complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0005797	Golgi medial cisterna
cellular_component	GO:0009536	plastid
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0015215	nucleotide transmembrane transporter activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0047458	beta-pyrazolylalanine synthase activity
molecular_function	GO:0004124	cysteine synthase activity
molecular_function	GO:0050461	L-mimosine synthase activity
molecular_function	GO:0050234	pyrazolylalanine synthase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0019003	GDP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25876	0.77	Barchart \| Table
Spo09993	0.74	Barchart \| Table
Spo06670	0.73	Barchart \| Table
Spo23527	0.72	Barchart \| Table
Spo12107	0.72	Barchart \| Table
Spo05640	0.72	Barchart \| Table
Spo09940	0.71	Barchart \| Table
Spo24679	0.71	Barchart \| Table
Spo21496	0.71	Barchart \| Table
Spo06146	0.70	Barchart \| Table
Spo21132	0.70	Barchart \| Table
Spo22507	0.70	Barchart \| Table
Spo25330	0.69	Barchart \| Table
Spo23588	0.69	Barchart \| Table
Spo04104	0.69	Barchart \| Table
Spo25851	0.68	Barchart \| Table
Spo22715	0.68	Barchart \| Table
Spo26148	0.68	Barchart \| Table
Spo02513	0.68	Barchart \| Table
Spo00161	0.68	Barchart \| Table
Spo11999	0.68	Barchart \| Table
Spo06464	0.67	Barchart \| Table
Spo00400	0.67	Barchart \| Table
Spo23589	0.67	Barchart \| Table
Spo06729	0.67	Barchart \| Table
Spo24066	0.66	Barchart \| Table
Spo00854	0.66	Barchart \| Table
Spo03422	0.66	Barchart \| Table
Spo03654	0.66	Barchart \| Table
Spo04868	0.66	Barchart \| Table
Spo05127	0.66	Barchart \| Table
Spo05990	0.66	Barchart \| Table
Spo06362	0.66	Barchart \| Table
Spo10136	0.66	Barchart \| Table
Spo11384	0.66	Barchart \| Table
Spo14008	0.66	Barchart \| Table
Spo20071	0.66	Barchart \| Table
Spo25230	0.66	Barchart \| Table
Spo25417	0.66	Barchart \| Table
Spo27030	0.66	Barchart \| Table
Spo17329	0.65	Barchart \| Table
Spo16804	0.65	Barchart \| Table
Spo27004	0.65	Barchart \| Table
Spo30013	0.65	Barchart \| Table
Spo17755	0.65	Barchart \| Table