Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGGCCGGTAAAAAGAAGAAGAGGAAGACCGTTTAAGTACTCTGCCTCACAACTTCCTCCTGAATTTTTCAAGGTTTATCTGCCAGAACACAATTCTAAGCAATTGGTAATCTTTTTATCAATGTATGTTGCACAAATTATAATACCAGCTGGAATTGATTTTGCCTTATTCAATGCATGCGGGTGTTTGAGATTGTGGATCAGAGTAAAAGAAACGTTTATTCCTGGTTGTGAAAACAGTTTGAATTCAAGCTATTAGATGGTAATTGAGTATGAAATGCTAAACAAAACTTGTTTTTCTAGTAGGCGGTTTGTTTGTTGGAACAAGGGCTAAGAAAGATAGAGAAATGTGTTATCAATAGTTACTACATTACACCTTTTAATAGTTTTAATGGTGACTCCAGTGGATAATTCTAGCTGGGTTACGCGGTAAAGTAAAATTTTTATGTGGTTTAGATCACTAATCACTGTGATAAGATGGGTTATTTGGAGATTACTGGATTAGTAAGGAGGTATTTTTGGGTAATTATGTAGTTATAATGAATTTGGTGTTTCGCAAATGTTGATTGTTTGTGGAAAATATTGGTTGTTGGGAGTTGAGAATAACAAAATTTATCAGGTTAATTGGGCAATGACAAAAATCTGCATCTTGCTTATATTACAACTTAAGTACTTAACAAGTGAGAATTGTTTTGTTAAAATGTGGTGATCAGGGTAGCTAGAATCAACTTGATCTTTTGCGGTTTAGCCATTAAGCTACGCCGAGTTAGGAAATCAGACATACTACAAGCTAGGGCAATAGAGCATCAAGAAGTTGGAATTGCGCTTGAACCCTTCTCTTGGTTGCTTATTTCAAGTGCATACTTCAACTTTCACCATGAAAATATGTTGAAGAGCCTTGTACTTTCTTTACCTTCTTTGTGAGCTAGGAAAGTGAACTTGCAGCAACTTGAATCAATCATCCATCTTTGAGATAAGTTACTTCATAACATGACTTGGGACCTTTCAAAAAAAAATGAGTTGATGTGGTTTTAAGCTTAATCAACTTCTTAATGAAGCTTAACCCAACTACAATGTGGATATACCTAGCTATATAGTATTGGTAATGAAAGGATCTCTCTACGGTTCATCTTGCAGGTGATACCTCCTGATTTTATAAAGAACTTCATGGGGAAGATTCCAATGGAAGTCATCTTAAAAAACTTGAAGGGAGAAGTTTGGAATGTGGAGTTGGAAAAGGCTGAATGCAAGTTACTTATGAAAAAGGGATGGGAAGACTTTGTGATTGGTAATTCATTAGCACGAGGAGAGTTCTTGATCTTTACATACAAAGGCAATTCTATGTTTACTGTCAAAATATTCAGTATCAATGGGTGCGTGAAGGACGATGAATCTATGGCCACCGATGAACAGCCTCATGTGAAGGTGAAGCAGGAGCCTAATTCAGATCAAATATACAGCCATGAAACTGGTGCCTGTGAAAAGACACATTTAGAAAGAAGTAGCACGAATAATGAAAGATTGTCTCAAGGTTAGTTCTTTGAATAAGCTTATCCAACTTTTTTCATACTTGAACGTCTATGATATGATGCATCTGTTCGCAGATTTGCATGAAGCAGTGACAAAGGATGTTCCAGAAAGAACCGTGGAATCAAGTAAGATACGATTTACAAGAGTTCATAAGGGAAAGATGTATGAATTGGTAATTTTTCTTTATCTGTTCTGGTATTATCCTGCCTATTTCTTTTCATTTGTACATTATTGACTCGCTACATGACTACACTAAATATGACACACTTATGCTCTGAGTCAAATGGTTCAAGAAGATATGATAGTAAAAACCGATAACTAAAACTGAAATAATCAGGAAATAGGATTTGTTCCACTTCTCCCTCCCCCCTCCTCTTGTTGAGGCTTGCAGTATACGTGTGTGCACGTATATTTAGTAATTGTGTTGTCCCAAATTGGAGATAAGGAGGGATAGTTATCAACTTCAGGAGTTAAATATGGTCCAAATTTCGTGTTCCTACACGTCTTTTAAAAAATAACTGTTGTTCGTGAGGGGTGAGTCTTGTTTAAGCTTTTAGTGGGTTTTGTCAATGTTTGGTTGAACTGCCGGTTAGAGTTTAACCCCCTTTCGCCGGAGAAAGTATAACTGTTTACATTTAGGAAATTACAGTGTTAAGAAGTGCTTAGGAATTAACTTTAGGAAGCTCCTTTCCACTTCCCTTTGCATTCACATGTGCGCTGTATTTTTCTCTAGGCATTGCTCTTTGCTCTTTTTTTTTCACCAAATGTAACACTCTCGATCCCTTAAGTTTATCTTCAAGGAAATTAAGGTGCATGGTCCGAAGATGTACAATGTACTGCTTTTGGAGTATATCTGATAAAAGTCGTTGTCAGAGGACTGTAAACATCAGTAGTACTTGAAATCTAATTTGTAAGTTATTTTTTATGTGCAGCACATTCCTTCAAGTATCTTCAGAAAGTATAAAATAGAACGACCGGAAATAAAAAGACCAGAACTGGTACTTCTGAAGTACCGAAGAGGGATTTCGCAGACAGTGAAGATCTTGGGGGGGCGTGACCGTGTTCTGATCACTTCTGGGTGGAAAGAATTTAAGTTAAAGAACAAATTGGTTAAGGGAGATGAGTATGAGTTTGAGATTAGTGTTGGAGAAGGGAGAAAGATCAAAGAGATCGAGCTGTTGAAAATTCTCCCTAGAAAGACAGTAACTACTCGAAAACGCAAGAAGATAACTCTGAGGCCTAGAAACAGTTGA ATGGCGAGGCCGGTAAAAAGAAGAAGAGGAAGACCGTTTAAGTACTCTGCCTCACAACTTCCTCCTGAATTTTTCAAGGTTTATCTGCCAGAACACAATTCTAAGCAATTGGTGATACCTCCTGATTTTATAAAGAACTTCATGGGGAAGATTCCAATGGAAGTCATCTTAAAAAACTTGAAGGGAGAAGTTTGGAATGTGGAGTTGGAAAAGGCTGAATGCAAGTTACTTATGAAAAAGGGATGGGAAGACTTTGTGATTGGTAATTCATTAGCACGAGGAGAGTTCTTGATCTTTACATACAAAGGCAATTCTATGTTTACTGTCAAAATATTCAGTATCAATGGGTGCGTGAAGGACGATGAATCTATGGCCACCGATGAACAGCCTCATGTGAAGGTGAAGCAGGAGCCTAATTCAGATCAAATATACAGCCATGAAACTGGTGCCTGTGAAAAGACACATTTAGAAAGAAGTAGCACGAATAATGAAAGATTGTCTCAAGATTTGCATGAAGCAGTGACAAAGGATGTTCCAGAAAGAACCGTGGAATCAAGTAAGATACGATTTACAAGAGTTCATAAGGGAAAGATGTATGAATTGCACATTCCTTCAAGTATCTTCAGAAAGTATAAAATAGAACGACCGGAAATAAAAAGACCAGAACTGGTACTTCTGAAGTACCGAAGAGGGATTTCGCAGACAGTGAAGATCTTGGGGGGGCGTGACCGTGTTCTGATCACTTCTGGGTGGAAAGAATTTAAGTTAAAGAACAAATTGGTTAAGGGAGATGAGTATGAGTTTGAGATTAGTGTTGGAGAAGGGAGAAAGATCAAAGAGATCGAGCTGTTGAAAATTCTCCCTAGAAAGACAGTAACTACTCGAAAACGCAAGAAGATAACTCTGAGGCCTAGAAACAGTTGA ATGGCGAGGCCGGTAAAAAGAAGAAGAGGAAGACCGTTTAAGTACTCTGCCTCACAACTTCCTCCTGAATTTTTCAAGGTTTATCTGCCAGAACACAATTCTAAGCAATTGGTGATACCTCCTGATTTTATAAAGAACTTCATGGGGAAGATTCCAATGGAAGTCATCTTAAAAAACTTGAAGGGAGAAGTTTGGAATGTGGAGTTGGAAAAGGCTGAATGCAAGTTACTTATGAAAAAGGGATGGGAAGACTTTGTGATTGGTAATTCATTAGCACGAGGAGAGTTCTTGATCTTTACATACAAAGGCAATTCTATGTTTACTGTCAAAATATTCAGTATCAATGGGTGCGTGAAGGACGATGAATCTATGGCCACCGATGAACAGCCTCATGTGAAGGTGAAGCAGGAGCCTAATTCAGATCAAATATACAGCCATGAAACTGGTGCCTGTGAAAAGACACATTTAGAAAGAAGTAGCACGAATAATGAAAGATTGTCTCAAGATTTGCATGAAGCAGTGACAAAGGATGTTCCAGAAAGAACCGTGGAATCAAGTAAGATACGATTTACAAGAGTTCATAAGGGAAAGATGTATGAATTGCACATTCCTTCAAGTATCTTCAGAAAGTATAAAATAGAACGACCGGAAATAAAAAGACCAGAACTGGTACTTCTGAAGTACCGAAGAGGGATTTCGCAGACAGTGAAGATCTTGGGGGGGCGTGACCGTGTTCTGATCACTTCTGGGTGGAAAGAATTTAAGTTAAAGAACAAATTGGTTAAGGGAGATGAGTATGAGTTTGAGATTAGTGTTGGAGAAGGGAGAAAGATCAAAGAGATCGAGCTGTTGAAAATTCTCCCTAGAAAGACAGTAACTACTCGAAAACGCAAGAAGATAACTCTGAGGCCTAGAAACAGTTGA MARPVKRRRGRPFKYSASQLPPEFFKVYLPEHNSKQLVIPPDFIKNFMGKIPMEVILKNLKGEVWNVELEKAECKLLMKKGWEDFVIGNSLARGEFLIFTYKGNSMFTVKIFSINGCVKDDESMATDEQPHVKVKQEPNSDQIYSHETGACEKTHLERSSTNNERLSQDLHEAVTKDVPERTVESSKIRFTRVHKGKMYELHIPSSIFRKYKIERPEIKRPELVLLKYRRGISQTVKILGGRDRVLITSGWKEFKLKNKLVKGDEYEFEISVGEGRKIKEIELLKILPRKTVTTRKRKKITLRPRNS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23963.1 vs. NCBI nr
Match: gi|902238668|gb|KNA25273.1| (hypothetical protein SOVF_008010 [Spinacia oleracea]) HSP 1 Score: 595.5 bits (1534), Expect = 5.300e-167 Identity = 300/307 (97.72%), Postives = 305/307 (99.35%), Query Frame = 1
BLAST of Spo23963.1 vs. NCBI nr
Match: gi|870862552|gb|KMT13751.1| (hypothetical protein BVRB_4g081300 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 305.8 bits (782), Expect = 8.300e-80 Identity = 167/285 (58.60%), Postives = 202/285 (70.88%), Query Frame = 1
BLAST of Spo23963.1 vs. NCBI nr
Match: gi|731328002|ref|XP_010674817.1| (PREDICTED: putative B3 domain-containing protein At5g66980 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 199.1 bits (505), Expect = 1.100e-47 Identity = 107/168 (63.69%), Postives = 122/168 (72.62%), Query Frame = 1
BLAST of Spo23963.1 vs. NCBI nr
Match: gi|449448370|ref|XP_004141939.1| (PREDICTED: putative B3 domain-containing protein At5g66980 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 2.500e-28 Identity = 95/290 (32.76%), Postives = 150/290 (51.72%), Query Frame = 1
BLAST of Spo23963.1 vs. NCBI nr
Match: gi|700193274|gb|KGN48478.1| (hypothetical protein Csa_6G489940 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 2.500e-28 Identity = 91/273 (33.33%), Postives = 140/273 (51.28%), Query Frame = 1
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0M5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_008010 PE=4 SV=1) HSP 1 Score: 595.5 bits (1534), Expect = 3.700e-167 Identity = 300/307 (97.72%), Postives = 305/307 (99.35%), Query Frame = 1
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FD58_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g081300 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.800e-80 Identity = 167/285 (58.60%), Postives = 202/285 (70.88%), Query Frame = 1
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KG38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G489940 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.800e-28 Identity = 91/273 (33.33%), Postives = 140/273 (51.28%), Query Frame = 1
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Match: A0A068UJJ5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027243001 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.700e-26 Identity = 98/294 (33.33%), Postives = 144/294 (48.98%), Query Frame = 1
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Match: A5B3C8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011465 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.100e-22 Identity = 56/138 (40.58%), Postives = 92/138 (66.67%), Query Frame = 1
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Match: Y5698_ARATH (Putative B3 domain-containing protein At5g66980 OS=Arabidopsis thaliana GN=At5g66980 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 7.700e-17 Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 1
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.100e-14 Identity = 82/286 (28.67%), Postives = 121/286 (42.31%), Query Frame = 1
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Match: Y5772_ARATH (B3 domain-containing protein At5g57720 OS=Arabidopsis thaliana GN=At5g57720 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.600e-14 Identity = 71/282 (25.18%), Postives = 119/282 (42.20%), Query Frame = 1
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Match: Y4474_ORYSJ (Putative B3 domain-containing protein Os04g0347400 OS=Oryza sativa subsp. japonica GN=Os04g0347400 PE=3 SV=3) HSP 1 Score: 72.0 bits (175), Expect = 1.300e-11 Identity = 79/308 (25.65%), Postives = 133/308 (43.18%), Query Frame = 1
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Match: Y3440_ARATH (B3 domain-containing protein At4g34400 OS=Arabidopsis thaliana GN=At4g34400 PE=2 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 4.800e-11 Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 1
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Match: AT5G66980.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 89.4 bits (220), Expect = 4.300e-18 Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 1
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Match: AT5G57720.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 80.5 bits (197), Expect = 2.000e-15 Identity = 71/282 (25.18%), Postives = 119/282 (42.20%), Query Frame = 1
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Match: AT4G34400.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 70.1 bits (170), Expect = 2.700e-12 Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 1
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Match: AT3G06220.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 67.0 bits (162), Expect = 2.300e-11 Identity = 36/124 (29.03%), Postives = 60/124 (48.39%), Query Frame = 1
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Match: AT1G16640.1 (AP2/B3-like transcriptional factor family protein) HSP 1 Score: 65.9 bits (159), Expect = 5.100e-11 Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23963.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23963.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23963.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo23963.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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