Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTTGATAAGACATGAAAGACTCTGCTTCAACTTGATCTTCAACCGATTTCCCCCCTCACAAAGTCTTCCATCTAAAAGATGAAAGCTTGTTTACGCCATGTCTCCACCATTGCTACATTCGTCCATTGTCAATACAAGCTCAAGAAAAGGAAAAACATTTGCATGGTCGCCGCAAAATTGAGCAATGACGATGACCCTTTTCTTCAAGCTGCCCTTCATTCCGCTACTCTTCGTTTCCAGGAGACCCATCGCCCAGGCATCTCTCCTTTTCTCTCTCCTATTTCCCCTTCTTTTTCTGTGATTTTTCATTCAGGCATTTTGTCGAACAGTTTGTAGGCATCTATTTTTTAGCACTTGGCTATTTTAAAATCCGCTTTTAGTTACTTGATAAAGATTGGTATTTGAGAAATGGGTGATGGAGGGATCCATACTGGTTGCTATTGTAGTGTGACTTGCTTCATTGGATCAATTACACCCATATTGATGCACTTCATACACTAAATTAATTTGATTAATAAGCAAAAAATCTGCCTTATTTGACCTGCCTACCTGTTATACAAGCAAACTTCGTGTAAACACTTGTAAGTGTTTGATGTAGTTTCTGCTAGTTCCTTCAAAGAATAAGTGTTAGAGGTAGTTTTGTGTATCTATTTGGTCTTAACATCGATTAGTTTGTGTAGAACTGTATAAGTGTTACTTAACAGTTTGTTGAAGTGCATTACATTATCTCTCATTATTTAAAGAAGTGGTTGAAAGTCGAAACTCAAAACAAACAGTTTATCAGCCCAAATCTTTCAGTGTTGACTCATACTTTGCCTTAACTATGTTTTCTGTTAACAATGATCCATGGAGCTCAACTGCTCGTACTGTTATTCTAACATGTCAGGGGTCTGGCTATATTTGCGTCTGCAGACCCTCTTTTCCACGATCCTTATGTGGCTTGCTTGGTTCCTGCAAACACGTCTGTCTATATGAAGCAACACTCGCACCCTTATTGCGTTGCTACCAGGTTTATTGATGATAAACTGCTCCAAACTTTGAGAAATGACGATGAATTGAAACAGGTATAACCAGTCCCAACATGTGAAGCTCTCCCGTTCATACCAATTTCCCGTAGCTATGTTTTAGGGCATGATGAATATTATGTAGGTTGTTTTATTGACAGATGGTGCAGATACTCGTGTTTATAGACTAACTTGGCCAAGCTCTACATTGATATTCGACATATCACCGGATATAATCTACTCTGAAGTGTCTCAGAAGCTTAGAGGTATGTTATGTGTACTGCATTCGAAACATTTATGATTATATTAATTATGTACGCGGAACTTTTGAGTATCAAAGCCAATGAAATCTTAATTTTTTCCTCTCATAATCAATCTTTTGGTTAGGGTTGCAACCTTTTGTGTTTTGTACAGTAGAAGAAAAATGTTTCAAATGCCTTTCATCATAATAAACCTTTTTTTTTTTTGTTGCTTACAATATATTTTCAGAATTTCTCAGGGAAGTTTGTCCATTTCATAGAAGTTTCTATGTAGCATAGATCTTCCTTCGAATTCATGAACTCTTGTTGTGTTTTTATAGTTACTTTTTACACTGCTGTGTCTGAACTATCAAATTGTAGATATTGGGGCTCAGATCAGCAGGAGCTGCTTATTGCTTCATGTTTCACTGGAGTCTTCTAACATACAAGAAGTCCTGCGAAAGAAAGGATTTAATGGTAACCGCCCAAGTATATGGTCTCTCCAGGTTTACATGTCATCAACATCTCTCTGTCTTTGACTCTTTTCCCTTCCTGTCTTTATATAGGAGTGAACTTTATGGAGTGAATATAACTTTTCTTTTTTCAGGGTCTACCCCTGTTGACATTGGCTAGTTTTGAAGATGTTTTGTCAATTGTGAGTAGTTTAGCCACAAAGGGAAGCCTTGTAATCGGAGAAGTTCCAACTGAACTTGAGCTGACGGTAGTGGCATGCTCACTTTGAATTTGCCCTGCGTCATATTCTTCATGAAAGACCATCTTATTCGTTTTCTTTGTAACTCAGACCGATCAAGAAGAACGGATGCACAAGCTTTTCATGCGCCATGGATTTCAGATTCATGTGATTGACCATGAAGATGTGGCTAGAAGTTTTGGTAGGGATCTATCAAGGGAATCCTACAACCGTGTACTCTTTGTTGCAGAACATTTGCGATTTTCAGATGATCAGGTTAGAACACATAATCTTCCACTCACACTTCAGTTTCACCCCCAAAAGGGATGAGGAGGGCATTATTTATGGGGTCAGCTTTGATATACTACTACATTTTCGTCCTCTCGTACTGGTATGAACTTAACAGGGTTGGGATCATGTGCCCCAGTTTATGTCCCAGACTCCCAGATTGTGTTTCACACTTTTACCTCCTTATTCAGTTCTTTAATGTGAATGAAGAGGCACAATCAAAGATTGTGGGATGTAAGATGAGACATAGAACTGGATAAAGGATCTCTACCTGTGTGAACTAGCCTATAATGTATATGTTGAAACTCAATGTAGATAATGTTAGTTTTGACGTAAATTTTGTCCAATGATTCATGATTGTCACTTCCAAACTGCAATTTTTATTCTTTTCATGAACTGAAATTCTTACTGTTTTTGTTGTCATTCGACATCTTTGCAGGTGGAAATGTGGCGAAGTGAATTCCAAAGGACTGAAGAGGACGGTGACGAAGAAGGGTTTGAAGATCTCTAAACATATTCAAGGATTTTACATTTAGTATTAACACAATCAATTTTGATGTGCAAAAAATATATTTATATATATTCAATCAAGTTCATCCTGATTTAAATCGAAATTGTTATTCTTGAGATGGTTGGACAGATTCCTTGTCATAAATCTGAAATACAATACAGGCTTTCACATCTAATTCAGTATGGTGGAACCTTATTTACATATGTTAGTCCAACAAAACTCATGAAGTTTTTATGTTGGCCCCAACCCCTGTTAACATTTAGATAGATGTATTGTTTTTGGAAGGCTTTAGTGCAAATGCCTTGAACTACAAGTCCAA TTGTTTGATAAGACATGAAAGACTCTGCTTCAACTTGATCTTCAACCGATTTCCCCCCTCACAAAGTCTTCCATCTAAAAGATGAAAGCTTGTTTACGCCATGTCTCCACCATTGCTACATTCGTCCATTGTCAATACAAGCTCAAGAAAAGGAAAAACATTTGCATGGTCGCCGCAAAATTGAGCAATGACGATGACCCTTTTCTTCAAGCTGCCCTTCATTCCGCTACTCTTCGTTTCCAGGAGACCCATCGCCCAGACCCTCTTTTCCACGATCCTTATGTGGCTTGCTTGGTTCCTGCAAACACGTCTGTCTATATGAAGCAACACTCGCACCCTTATTGCGTTGCTACCAGGTTTATTGATGATAAACTGCTCCAAACTTTGAGAAATGACGATGAATTGAAACAGGTTGTTTTATTGACAGATGGTGCAGATACTCGTGTTTATAGACTAACTTGGCCAAGCTCTACATTGATATTCGACATATCACCGGATATAATCTACTCTGAAGTGTCTCAGAAGCTTAGAGATATTGGGGCTCAGATCAGCAGGAGCTGCTTATTGCTTCATGTTTCACTGGAGTCTTCTAACATACAAGAAGTCCTGCGAAAGAAAGGATTTAATGGTAACCGCCCAAGTATATGGTCTCTCCAGGGTCTACCCCTGTTGACATTGGCTAGTTTTGAAGATGTTTTGTCAATTGTGAGTAGTTTAGCCACAAAGGGAAGCCTTGTAATCGGAGAAGTTCCAACTGAACTTGAGCTGACGACCGATCAAGAAGAACGGATGCACAAGCTTTTCATGCGCCATGGATTTCAGATTCATGTGATTGACCATGAAGATGTGGCTAGAAGTTTTGGTAGGGATCTATCAAGGGAATCCTACAACCGTGTACTCTTTGTTGCAGAACATTTGCGATTTTCAGATGATCAGGTGGAAATGTGGCGAAGTGAATTCCAAAGGACTGAAGAGGACGGTGACGAAGAAGGGTTTGAAGATCTCTAAACATATTCAAGGATTTTACATTTAGTATTAACACAATCAATTTTGATGTGCAAAAAATATATTTATATATATTCAATCAAGTTCATCCTGATTTAAATCGAAATTGTTATTCTTGAGATGGTTGGACAGATTCCTTGTCATAAATCTGAAATACAATACAGGCTTTCACATCTAATTCAGTATGGTGGAACCTTATTTACATATGTTAGTCCAACAAAACTCATGAAGTTTTTATGTTGGCCCCAACCCCTGTTAACATTTAGATAGATGTATTGTTTTTGGAAGGCTTTAGTGCAAATGCCTTGAACTACAAGTCCAA ATGAAAGCTTGTTTACGCCATGTCTCCACCATTGCTACATTCGTCCATTGTCAATACAAGCTCAAGAAAAGGAAAAACATTTGCATGGTCGCCGCAAAATTGAGCAATGACGATGACCCTTTTCTTCAAGCTGCCCTTCATTCCGCTACTCTTCGTTTCCAGGAGACCCATCGCCCAGACCCTCTTTTCCACGATCCTTATGTGGCTTGCTTGGTTCCTGCAAACACGTCTGTCTATATGAAGCAACACTCGCACCCTTATTGCGTTGCTACCAGGTTTATTGATGATAAACTGCTCCAAACTTTGAGAAATGACGATGAATTGAAACAGGTTGTTTTATTGACAGATGGTGCAGATACTCGTGTTTATAGACTAACTTGGCCAAGCTCTACATTGATATTCGACATATCACCGGATATAATCTACTCTGAAGTGTCTCAGAAGCTTAGAGATATTGGGGCTCAGATCAGCAGGAGCTGCTTATTGCTTCATGTTTCACTGGAGTCTTCTAACATACAAGAAGTCCTGCGAAAGAAAGGATTTAATGGTAACCGCCCAAGTATATGGTCTCTCCAGGGTCTACCCCTGTTGACATTGGCTAGTTTTGAAGATGTTTTGTCAATTGTGAGTAGTTTAGCCACAAAGGGAAGCCTTGTAATCGGAGAAGTTCCAACTGAACTTGAGCTGACGACCGATCAAGAAGAACGGATGCACAAGCTTTTCATGCGCCATGGATTTCAGATTCATGTGATTGACCATGAAGATGTGGCTAGAAGTTTTGGTAGGGATCTATCAAGGGAATCCTACAACCGTGTACTCTTTGTTGCAGAACATTTGCGATTTTCAGATGATCAGGTGGAAATGTGGCGAAGTGAATTCCAAAGGACTGAAGAGGACGGTGACGAAGAAGGGTTTGAAGATCTCTAA MKACLRHVSTIATFVHCQYKLKKRKNICMVAAKLSNDDDPFLQAALHSATLRFQETHRPDPLFHDPYVACLVPANTSVYMKQHSHPYCVATRFIDDKLLQTLRNDDELKQVVLLTDGADTRVYRLTWPSSTLIFDISPDIIYSEVSQKLRDIGAQISRSCLLLHVSLESSNIQEVLRKKGFNGNRPSIWSLQGLPLLTLASFEDVLSIVSSLATKGSLVIGEVPTELELTTDQEERMHKLFMRHGFQIHVIDHEDVARSFGRDLSRESYNRVLFVAEHLRFSDDQVEMWRSEFQRTEEDGDEEGFEDL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24022.1 vs. NCBI nr
Match: gi|902229309|gb|KNA21462.1| (hypothetical protein SOVF_042970 [Spinacia oleracea]) HSP 1 Score: 558.9 bits (1439), Expect = 5.500e-156 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo24022.1 vs. NCBI nr
Match: gi|731346303|ref|XP_010684383.1| (PREDICTED: uncharacterized protein LOC104898942 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 484.2 bits (1245), Expect = 1.700e-133 Identity = 242/306 (79.08%), Postives = 267/306 (87.25%), Query Frame = 1
BLAST of Spo24022.1 vs. NCBI nr
Match: gi|731346301|ref|XP_010684382.1| (PREDICTED: uncharacterized protein LOC104898942 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 448.4 bits (1152), Expect = 1.000e-122 Identity = 224/284 (78.87%), Postives = 247/284 (86.97%), Query Frame = 1
BLAST of Spo24022.1 vs. NCBI nr
Match: gi|694415005|ref|XP_009335692.1| (PREDICTED: uncharacterized protein LOC103928383 [Pyrus x bretschneideri]) HSP 1 Score: 349.7 bits (896), Expect = 5.000e-93 Identity = 170/282 (60.28%), Postives = 218/282 (77.30%), Query Frame = 1
BLAST of Spo24022.1 vs. NCBI nr
Match: gi|595793365|ref|XP_007200431.1| (hypothetical protein PRUPE_ppa008815mg [Prunus persica]) HSP 1 Score: 345.5 bits (885), Expect = 9.500e-92 Identity = 169/282 (59.93%), Postives = 217/282 (76.95%), Query Frame = 1
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRK8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_042970 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 3.800e-156 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWZ5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163850 PE=4 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 1.200e-133 Identity = 242/306 (79.08%), Postives = 267/306 (87.25%), Query Frame = 1
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Match: M5W4B6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008815mg PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 6.600e-92 Identity = 169/282 (59.93%), Postives = 217/282 (76.95%), Query Frame = 1
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Match: V4TVP8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021225mg PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.900e-91 Identity = 171/306 (55.88%), Postives = 231/306 (75.49%), Query Frame = 1
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Match: A0A067H5U6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021091mg PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.900e-91 Identity = 171/306 (55.88%), Postives = 231/306 (75.49%), Query Frame = 1
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Match: Y1480_MYCS2 (Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_1480 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.100e-14 Identity = 59/223 (26.46%), Postives = 99/223 (44.39%), Query Frame = 1
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Match: Y5024_MYCGI (Putative S-adenosyl-L-methionine-dependent methyltransferase Mflv_5024 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_5024 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.000e-14 Identity = 58/209 (27.75%), Postives = 92/209 (44.02%), Query Frame = 1
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Match: Y1059_MYCMM (Putative S-adenosyl-L-methionine-dependent methyltransferase MMAR_1059 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1059 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.400e-13 Identity = 54/169 (31.95%), Postives = 88/169 (52.07%), Query Frame = 1
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Match: Y818_MYCUA (Putative S-adenosyl-L-methionine-dependent methyltransferase MUL_0818 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_0818 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.800e-13 Identity = 53/169 (31.36%), Postives = 84/169 (49.70%), Query Frame = 1
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Match: Y2732_MYCA1 (Putative S-adenosyl-L-methionine-dependent methyltransferase MAV_2732 OS=Mycobacterium avium (strain 104) GN=MAV_2732 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.900e-13 Identity = 60/225 (26.67%), Postives = 100/225 (44.44%), Query Frame = 1
BLAST of Spo24022.1 vs. TAIR (Arabidopsis)
Match: AT4G02405.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 293.5 bits (750), Expect = 1.500e-79 Identity = 143/291 (49.14%), Postives = 207/291 (71.13%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24022.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo24022.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo24022.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo24022.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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