Spo24103 (gene)

Overview
NameSpo24103
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAlbugo candida WGS project CAIX00000000 data, strain Ac Nc2, contig AcNc2_CONTIG_116_length_69695
Locationchr1 : 29685261 .. 29688507 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCACGCCGTCATAAGATGGGAAGAGGTCCAAGCTTTGACCGAAGATTAGGGAGTTTGTTGAAGACGTGAGCAACGGCCAAGGAGGAATCCCTATCTTCCAGGGATCTTCCCAACCAATAGAACCGTTAGCGTTTGGCATATAAAAGCATAAAGAACGGCGTGATGAAGACACATTCACTCAAGCACTTAAACTCTTAAGCTATCAACTGTCTTTAGCGTTCATCATTGTACTTTAGATTTTCAATATCAATTCTCAGAAAAGAAGAGCATAAACAATCATATAGAATACTTAGTGGATTGATAGCCTCATAGCTATCCGCGGTTTTTTACCTTATTCCTGGGTTTTCCGCGTCTAACACTTCTCGGTGTCGTGTCTCCTTTATTTGTGTTATTAATTCTTTGCTTAGTTAGTGTCGATCCTAGCCGAAAGTCGTCTCTATACGAATTTTGGCATAAACAGGTTTCTCTCTCCTCTTCTCTCTCTCGATCGATTTAGGATTTAGGTGTTGTGTTTGAATGTCGTTTTGATTTGTGCTATGATTTTTCTGTGGTTTTGTAGCTGAAATGCGGGGGATGTGGAGAGGTGACGAAGAAGGAGACCTGTGCGGCCCGGCGACTTGTTTCTCCTATTTTCAAGGAATTTTCTTATCTCTTTAAGAAGGTTTCTCCTATTCCGATTCCTAAGGGTTTCGCTAATCTCGTCCAGAAGGTTACTCTCTCTCCTCTCTCTCCTCCTCCTATTTTGATTTGTGTTTTGCTTCGGAAATCATCGCGATTATCGATTGCACGCGTATGTTCCTATTCAATCGATACTGGAATAATGATCGCAAACTGGAATCGATTTGATTAATCAATATTAAGATTCTAGTAGAGTACTTCGATCATTTAATTCGTGTTTGATTACTGTAGACCTGTAGTCATATGATTTGCTGTAGAGTTTGCTTCGAAAATTATCGCTATTAACGATCGTTGATTATGTTTTCTGAAGATTCTAGTACGAGTACTACTACTTCAATTGTGTTTGATTATTGTAGTGATTTGAGGCATATGAATGAATTATTCGTCGTTCAACATGTTTGATTGCTCTCCAGCAAAGTTGTTAAACTTGTGCTTCCTGTGTATTCATCTATATCTATCTATCATTTTGAATTTTTGATTGTTGAGCTTATCATAACTACCTATATTTAATGCTTGTAAATGCATTTCAATGTGAAGAATAGCTTAACAATGCCGTCTTAAAACTTACGAGTACTTTGTAAATTGTAATGATGGCCCTGGCCGGGCCGGGCCAGGCCTCGTGTCTAGGGTCTGGATTGTACCGGCTCACACACAACTCACTAGCTACGTGCAAGACCAAACATTTTATTAGGGTGGCCCAAGCTCGGTCCACGGATTTGTGCCCTTGCCGTACTTTTTTGTGCTGGGTCGTGTGGTCGAGCTAGTCCCATCTTTAAGTACTTGTATCAAATATTATATGAACTGTTAACATTTCATTCTCGCCGTAAAATTATCTGGGCACCGAGCATTGTACAGCTTTAAACATTTATGATCACTGCAAATAGCTAGTTGAACGTTATTCGCCTTGTTTACAGTACCTATTTTTGCTTGGTTTACTGAATATGATCAATATGGTATGGGAAAATAATTATCTCAGTTTCACAGATATGTGTGACCTGAACACACTATCAAGAATGGTGTATTATGGAGTAGTTGTAAGACTGTAACAGTTGGCCAACATAATTCCTATGATATACATTCAGCATCATTTGCCCTTAGATCCGCTGTACTGTTTTGGTCTTTCTCTTTAATTATGTTTTAATCAGAGTAGCATTTTGTCATTCCTGTGTTTAGTTGGAATATTTGAACCAGTGTATCAGTTGAACCTCATATAATGCCCTGCTTCCCTTGTATGAGTGTAGACTGGCATGAACTGTGCTCTTGCGGCCTTGCCCTTCTTGAATATATGGCTCTATATTAAGCGCGACTTATTGATGCATGTCTCTCCTGGGAAAATCTTCTGCGAGTTGTTCCCTTTCTGCATTCTGTGCATTCCACTACTTATTTTGTAATGCTACTTAGCCTACTTGTATGACTTGCTTTGTAAAAAAACACACTGGTAAATTTTGTAATGGTGCTAATCGATTTCCCTCACTATTTCAGTGTAAGGGCTGTGGTAGAGTGGGTTCTGTTCAATTGATTCCTGGGGCTGGCCGCCCTCTGAAAAGGGAAGATTTTGATTCAGGGAGGTATGCTGTTTTGATGTCCTTCAGATGCCAGGGTTTTGAGCCAGATGAGTACTCCTTTGGTGGTCACTGGAGAGTTGAATCTGTAAGTCTTTTTATGTTGGAAACTTGCTAGATTATTATTTAATGTTATTCTAGGTAGCATGTGAGGCTCTTGTAACCTATGGTTTCTCTGTGCAAATACCCATATTGTTTGTTGTTGCATGTGATGGTAGTGTATGTAGGCTTAACATTCCAGCCGTTCTGTTTCCCTTGTGCAACCACCACCAGTCCACCAGTACATCGCCATAGATAATTGTTCCTTCCTCTATCTCATTGCCTCATGCCCATAAGCTTGATAGTTGTATAAGTTTGATTTTCATTATGTGGGGGTTCAGTTATTTGCCTAAAGTGTGCATATACTTCATTATCTCTGCTCAAGTTTCACTGGCTATGATTGGAAATTTGGGGATGACGCTTCTGAAAAGCGACTTTGTTAGATTTGTGTTCCCTTTGAGTTCTTTTGCTTCTTACACTAGAGTTATGTTGTGTTGTCTGATGCACCCTCTGTTAATCTTGTTTGGACAGACTAAAGGGAGTGTGTATGAGGATGTGGACCTATCGGAAGGGGACTGGGCTGAATATGATGAAGATGAGGCCATGCCAGTTTCAGTATGCAACCTGAAAGCACGTTTCGTAAGGATTAATCATAAGCTGAGAGTGTTTCCTGCACTGTTCCTGTGAACCAAACTCTGATGGATGAGAAGTGTGACTACAACTCAACTATTAGATAAAAAATGAAGTAAATAATCCGTACAGAAAAACAAGTATAGATAGGACAACTTACTCGCCTGCTCGGATAAGTGAATGTCATTGCTAATGTAGTGCTTGCAACTTCATTAATCTGTTTTCTGTAATCAAACTTTTAGCTTTCCCAGTGCCTTGAAGGCTATTAGCCTGTGGCTATTCTGATGTTTTATGAAATTGTTGGTGACACTATTAATTGTGGTGTTTCTTCGT

mRNA sequence

ATGGGCCACGCCGTCATAAGATGGGAAGAGCTGAAATGCGGGGGATGTGGAGAGGTGACGAAGAAGGAGACCTGTGCGGCCCGGCGACTTGTTTCTCCTATTTTCAAGGAATTTTCTTATCTCTTTAAGAAGGTTTCTCCTATTCCGATTCCTAAGGGTTTCGCTAATCTCGTCCAGAAGTGTAAGGGCTGTGGTAGAGTGGGTTCTGTTCAATTGATTCCTGGGGCTGGCCGCCCTCTGAAAAGGGAAGATTTTGATTCAGGGAGGTATGCTGTTTTGATGTCCTTCAGATGCCAGGGTTTTGAGCCAGATGAGTACTCCTTTGGTGGTCACTGGAGAGTTGAATCTACTAAAGGGAGTGTGTATGAGGATGTGGACCTATCGGAAGGGGACTGGGCTGAATATGATGAAGATGAGGCCATGCCAGTTTCAGTATGCAACCTGAAAGCACGTTTCGTAAGGATTAATCATAAGCTGAGAGTGTTTCCTGCACTGTTCCTGTGAACCAAACTCTGATGGATGAGAAGTGTGACTACAACTCAACTATTAGATAAAAAATGAAGTAAATAATCCGTACAGAAAAACAAGTATAGATAGGACAACTTACTCGCCTGCTCGGATAAGTGAATGTCATTGCTAATGTAGTGCTTGCAACTTCATTAATCTGTTTTCTGTAATCAAACTTTTAGCTTTCCCAGTGCCTTGAAGGCTATTAGCCTGTGGCTATTCTGATGTTTTATGAAATTGTTGGTGACACTATTAATTGTGGTGTTTCTTCGT

Coding sequence (CDS)

ATGGGCCACGCCGTCATAAGATGGGAAGAGCTGAAATGCGGGGGATGTGGAGAGGTGACGAAGAAGGAGACCTGTGCGGCCCGGCGACTTGTTTCTCCTATTTTCAAGGAATTTTCTTATCTCTTTAAGAAGGTTTCTCCTATTCCGATTCCTAAGGGTTTCGCTAATCTCGTCCAGAAGTGTAAGGGCTGTGGTAGAGTGGGTTCTGTTCAATTGATTCCTGGGGCTGGCCGCCCTCTGAAAAGGGAAGATTTTGATTCAGGGAGGTATGCTGTTTTGATGTCCTTCAGATGCCAGGGTTTTGAGCCAGATGAGTACTCCTTTGGTGGTCACTGGAGAGTTGAATCTACTAAAGGGAGTGTGTATGAGGATGTGGACCTATCGGAAGGGGACTGGGCTGAATATGATGAAGATGAGGCCATGCCAGTTTCAGTATGCAACCTGAAAGCACGTTTCGTAAGGATTAATCATAAGCTGAGAGTGTTTCCTGCACTGTTCCTGTGA

Protein sequence

MGHAVIRWEELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGSVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSEGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24103.1Spo24103.1mRNA


Homology
[Close]
BLAST of Spo24103.1 vs. NCBI nr
Match: gi|902078334|gb|KNA03101.1| (hypothetical protein SOVF_212340, partial [Spinacia oleracea])

HSP 1 Score: 334.7 bits (857), Expect = 9.100e-89
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 1 

		  

Query: 9   EELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG 68
           ++LKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG
Sbjct: 15  KQLKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG 74

Query: 69  SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS 128
           SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS
Sbjct: 75  SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS 134

Query: 129 EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL 168
           EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL
Sbjct: 135 EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL 173
[Close]
BLAST of Spo24103.1 vs. NCBI nr
Match: gi|902233482|gb|KNA23077.1| (hypothetical protein SOVF_028210 [Spinacia oleracea])

HSP 1 Score: 155.6 bits (392), Expect = 7.600e-35
Identity = 74/144 (51.39%), Postives = 99/144 (68.75%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +LKCG CGEVT+KET                +  +V PIP  +G ANLVQKCK CGR G+
Sbjct: 34  KLKCGNCGEVTEKETYV--------------VLGEVVPIPKSRGNANLVQKCKLCGRDGT 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGG-HWRVESTKGSVYEDVDLS 129
           + +IP +GRPL  +D + G+YA +MSF C+G EP  YSFGG  W++ +T G+V+E+VDLS
Sbjct: 94  ITMIPKSGRPLTGDDCEEGKYAPMMSFDCRGLEPVAYSFGGDQWKIVTTAGTVFENVDLS 153

Query: 130 EGDWAEYDEDEAMPVSVCNLKARF 153
           +GDWA+YDE   MP S+ NL++RF
Sbjct: 154 DGDWADYDEKGKMPTSISNLQSRF 163
[Close]
BLAST of Spo24103.1 vs. NCBI nr
Match: gi|731317499|ref|XP_010669152.1| (PREDICTED: UPF0587 protein C1orf123 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 9.900e-35
Identity = 76/144 (52.78%), Postives = 99/144 (68.75%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +L+C  CGEVT KETC               + + V P+P  +G ANLVQKCK CGR G+
Sbjct: 34  KLRCENCGEVTPKETCV--------------VLQDVVPLPKSRGQANLVQKCKFCGREGN 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFG-GHWRVESTKGSVYEDVDLS 129
           + +IP  GRPL   D ++G+YA LMSF C+G EP EYSFG   W+VE+T G+V+E+V+LS
Sbjct: 94  ITMIPKFGRPLTGADCEAGQYAPLMSFDCRGLEPLEYSFGCDQWKVETTAGTVFENVNLS 153

Query: 130 EGDWAEYDEDEAMPVSVCNLKARF 153
            GDW +YDE+ +MPVSV NLK+RF
Sbjct: 154 GGDWVDYDENGSMPVSVDNLKSRF 163
[Close]
BLAST of Spo24103.1 vs. NCBI nr
Match: gi|702291461|ref|XP_010047312.1| (PREDICTED: UPF0587 protein C1orf123 homolog [Eucalyptus grandis])

HSP 1 Score: 147.1 bits (370), Expect = 2.700e-32
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +L+CG CGEVT+KETC                  +  PIP  KG  +LVQKCK C R G+
Sbjct: 34  KLRCGRCGEVTQKETCLT--------------LGESLPIPNSKGTTHLVQKCKFCERDGT 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSE 129
           V +IPG GRPL +ED +SG+YA LM F C+G+EP EYSF G W+ ES +G+++E++DLS 
Sbjct: 94  VTMIPGQGRPLTQEDSESGKYAPLMLFDCRGYEPVEYSFLGLWKAESLEGTLFENIDLSG 153

Query: 130 GDWAEYDEDEAMPVSVCNLKARF 153
           G+ AEYDE    PV + NL+A F
Sbjct: 154 GEIAEYDEKGECPVMISNLRATF 162
[Close]
BLAST of Spo24103.1 vs. NCBI nr
Match: gi|586759048|ref|XP_006853923.1| (PREDICTED: UPF0587 protein C1orf123 [Amborella trichopoda])

HSP 1 Score: 143.7 bits (361), Expect = 3.000e-31
Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           ++KCG CGE+++KETC                  +   +P  KG ANLVQKCK CGR G+
Sbjct: 34  KVKCGNCGELSQKETCVT--------------LSETVQLPKSKGSANLVQKCKFCGRDGN 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSE 129
           + +IPG G+PL  ED +SG+Y  LM F C+GFEP  +SF   W  EST G+ + D+DLSE
Sbjct: 94  IVMIPGRGKPLTLEDSESGKYVPLMMFDCRGFEPVGFSFRDGWAAESTSGTKFGDIDLSE 153

Query: 130 GDWAEYDEDEAMPVSVCNLKARFV 154
           G++ EYDE    PV + N++ RFV
Sbjct: 154 GEYVEYDEKGQYPVGISNVQERFV 163
[Close]
BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9D3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_212340 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 6.300e-89
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 1 

		  

Query: 9   EELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG 68
           ++LKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG
Sbjct: 15  KQLKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVG 74

Query: 69  SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS 128
           SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS
Sbjct: 75  SVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLS 134

Query: 129 EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL 168
           EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL
Sbjct: 135 EGDWAEYDEDEAMPVSVCNLKARFVRINHKLRVFPALFL 173
[Close]
BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RW51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028210 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.300e-35
Identity = 74/144 (51.39%), Postives = 99/144 (68.75%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +LKCG CGEVT+KET                +  +V PIP  +G ANLVQKCK CGR G+
Sbjct: 34  KLKCGNCGEVTEKETYV--------------VLGEVVPIPKSRGNANLVQKCKLCGRDGT 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGG-HWRVESTKGSVYEDVDLS 129
           + +IP +GRPL  +D + G+YA +MSF C+G EP  YSFGG  W++ +T G+V+E+VDLS
Sbjct: 94  ITMIPKSGRPLTGDDCEEGKYAPMMSFDCRGLEPVAYSFGGDQWKIVTTAGTVFENVDLS 153

Query: 130 EGDWAEYDEDEAMPVSVCNLKARF 153
           +GDWA+YDE   MP S+ NL++RF
Sbjct: 154 DGDWADYDEKGKMPTSISNLQSRF 163
[Close]
BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWI0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033080 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.900e-35
Identity = 76/144 (52.78%), Postives = 99/144 (68.75%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +L+C  CGEVT KETC               + + V P+P  +G ANLVQKCK CGR G+
Sbjct: 34  KLRCENCGEVTPKETCV--------------VLQDVVPLPKSRGQANLVQKCKFCGREGN 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFG-GHWRVESTKGSVYEDVDLS 129
           + +IP  GRPL   D ++G+YA LMSF C+G EP EYSFG   W+VE+T G+V+E+V+LS
Sbjct: 94  ITMIPKFGRPLTGADCEAGQYAPLMSFDCRGLEPLEYSFGCDQWKVETTAGTVFENVNLS 153

Query: 130 EGDWAEYDEDEAMPVSVCNLKARF 153
            GDW +YDE+ +MPVSV NLK+RF
Sbjct: 154 GGDWVDYDENGSMPVSVDNLKSRF 163
[Close]
BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Match: A0A059CLE0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00632 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.900e-32
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +L+CG CGEVT+KETC                  +  PIP  KG  +LVQKCK C R G+
Sbjct: 34  KLRCGRCGEVTQKETCLT--------------LGESLPIPNSKGTTHLVQKCKFCERDGT 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSE 129
           V +IPG GRPL +ED +SG+YA LM F C+G+EP EYSF G W+ ES +G+++E++DLS 
Sbjct: 94  VTMIPGQGRPLTQEDSESGKYAPLMLFDCRGYEPVEYSFLGLWKAESLEGTLFENIDLSG 153

Query: 130 GDWAEYDEDEAMPVSVCNLKARF 153
           G+ AEYDE    PV + NL+A F
Sbjct: 154 GEIAEYDEKGECPVMISNLRATF 162
[Close]
BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Match: U5CZG3_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00036p00193790 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.100e-31
Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           ++KCG CGE+++KETC                  +   +P  KG ANLVQKCK CGR G+
Sbjct: 34  KVKCGNCGELSQKETCVT--------------LSETVQLPKSKGSANLVQKCKFCGRDGN 93

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSE 129
           + +IPG G+PL  ED +SG+Y  LM F C+GFEP  +SF   W  EST G+ + D+DLSE
Sbjct: 94  IVMIPGRGKPLTLEDSESGKYVPLMMFDCRGFEPVGFSFRDGWAAESTSGTKFGDIDLSE 153

Query: 130 GDWAEYDEDEAMPVSVCNLKARFV 154
           G++ EYDE    PV + N++ RFV
Sbjct: 154 GEYVEYDEKGQYPVGISNVQERFV 163
[Close]
BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Match: U587_NEMVE (UPF0587 protein v1g245604 OS=Nematostella vectensis GN=v1g245604 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.100e-14
Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = 1 

		  

Query: 11  LKCGGCGEVTKKETCAARRLVSPIFKEFSYL-FKKVSPIPIPKGFANLVQKCKGCGRVGS 70
           LKC  CGEVTK               ++ Y+   +  P+   +G+A+ V KCK C R  S
Sbjct: 31  LKCMNCGEVTK---------------QWVYMCLMESQPVKGGRGYAHFVSKCKLCHRENS 90

Query: 71  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSVYEDVDLSE 130
           V ++  +  P       +G++  ++SF C+G EP ++S    W  E    S   +VDL+E
Sbjct: 91  VDIMKDSIHPYLASH--NGKFHTIVSFDCRGVEPTDFSPRTGWTAEGENTSTPFEVDLTE 150

Query: 131 GDWAEYDEDEAMPVSVCNLKARFVRI 156
            DW++YDE     V V  + ++F+++
Sbjct: 151 KDWSDYDEKAQNAVGVYGVTSQFIKL 159
[Close]
BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Match: U587_DROME (UPF0587 protein CG4646 OS=Drosophila melanogaster GN=CG4646 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-14
Identity = 45/147 (30.61%), Postives = 71/147 (48.30%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCGRVGS 69
           +LKC  CGE + K            + + +   +         GF N   KCK C R  S
Sbjct: 30  KLKCSNCGEQSDK------------WHDITESERVQQDSRNAAGF-NFFMKCKMCSRENS 89

Query: 70  VQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTK-GSVYEDVDLS 129
           + ++  +  P   +D  SG +  ++ F C+G EP E+S    WRV S + G  +E+VDLS
Sbjct: 90  IDIVDKSNAPYTADD--SGAFKTIVVFECRGAEPVEFSPRVGWRVSSAENGQQFEEVDLS 149

Query: 130 EGDWAEYDEDEAMPVSVCNLKARFVRI 156
           E DW EYD+     V +    ++F+++
Sbjct: 150 EDDWVEYDQKNNNSVGIYEFASKFIKL 161
[Close]
BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Match: CA123_HUMAN (UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.600e-14
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1 

		  

Query: 7   RWE-ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCG 66
           RW  ++KCG CGE++ K              ++  L   V+ +   +G A++VQKCK C 
Sbjct: 26  RWYLKMKCGNCGEISDKW-------------QYIRLMDSVA-LKGGRGSASMVQKCKLCA 85

Query: 67  RVGSVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTK-GSVYED 126
           R  S++++    +P   ED ++  +  ++ F C+G EP ++     +  E  + G+ + D
Sbjct: 86  RENSIEILSSTIKPYNAEDNEN--FKTIVEFECRGLEPVDFQPQAGFAAEGVESGTAFSD 145

Query: 127 VDLSEGDWAEYDEDEAMPVSVCNLKARFVR 155
           ++L E DW +YDE     V +  +  +FV+
Sbjct: 146 INLQEKDWTDYDEKAQESVGIYEVTHQFVK 159
[Close]
BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Match: CA123_BOVIN (UPF0587 protein C1orf123 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-13
Identity = 42/150 (28.00%), Postives = 78/150 (52.00%), Query Frame = 1 

		  

Query: 7   RWE-ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCG 66
           RW  ++KCG CGE+++K              ++  L   V+ +   +G A++VQKCK C 
Sbjct: 26  RWYLKMKCGNCGEISEKW-------------QYIRLMDSVA-LKGGRGSASMVQKCKLCS 85

Query: 67  RVGSVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTK-GSVYED 126
           R  S++++    +    ED +  ++  ++ F C+G EP ++     +  E  + G+V+ D
Sbjct: 86  RENSIEILSSTIKSYNAEDNE--KFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSD 145

Query: 127 VDLSEGDWAEYDEDEAMPVSVCNLKARFVR 155
           ++L E DW +YDE     V +  +  +FV+
Sbjct: 146 INLQEKDWTDYDEKAQESVGIYEVTHQFVK 159
[Close]
BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Match: CA123_RAT (UPF0587 protein C1orf123 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-13
Identity = 42/150 (28.00%), Postives = 78/150 (52.00%), Query Frame = 1 

		  

Query: 7   RWE-ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQKCKGCG 66
           RW  ++KCG CGE+++K              ++  L   V+ +   +G A++VQKCK C 
Sbjct: 26  RWYLKMKCGNCGEISEKW-------------QYIRLMDSVA-LKGGRGSASMVQKCKLCA 85

Query: 67  RVGSVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTK-GSVYED 126
           R  S++++    +    ED +  ++  ++ F C+G EP ++     +  E  + G+V+ D
Sbjct: 86  RENSIEILSSTIKSYNAEDNE--KFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSD 145

Query: 127 VDLSEGDWAEYDEDEAMPVSVCNLKARFVR 155
           ++L E DW +YDE     V +  +  +FV+
Sbjct: 146 INLQEKDWTDYDEKTQESVGIFEVTHQFVK 159
[Close]
BLAST of Spo24103.1 vs. TAIR (Arabidopsis)
Match: AT4G32930.2 (unknown protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.300e-28
Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 1 

		  

Query: 10  ELKCGGCGEVTKKETCAARRLVSPIFKEFSYLFKKVSPIPIPKGFANLVQK--------C 69
           +LKC  CGEVT KETC               L +  +P P  +G  +LVQK        C
Sbjct: 34  KLKCERCGEVTPKETCVT-------------LNETFTP-PGGRGTCHLVQKKANIGSDLC 93

Query: 70  KGCGRVGSVQLIPGAGRPLKREDFDSGRYAVLMSFRCQGFEPDEYSFGGHWRVESTKGSV 129
           K CGR G+V +IPG GRPL  ED ++G +A LM F C+G+EP ++ FGG+W+ ++  G+ 
Sbjct: 94  KFCGREGNVTMIPGKGRPLTLEDSEAGEHAPLMVFDCRGYEPIDFGFGGYWKAQAESGTK 153

Query: 130 YEDVDLSEG-DWAEYDEDEAMPVSVCNLKARF 153
           ++++DLS G ++ EYDE    PV + N +A F
Sbjct: 154 FDEIDLSSGEEFTEYDEKGECPVMISNFRASF 171
The following BLAST results are available for this feature:
BLAST of Spo24103.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902078334|gb|KNA03101.1|9.1e-8998.7hypothetical protein SOVF_2123... [more]
gi|902233482|gb|KNA23077.1|7.6e-3551.3hypothetical protein SOVF_0282... [more]
gi|731317499|ref|XP_010669152.1|9.9e-3552.7PREDICTED: UPF0587 protein C1o... [more]
gi|702291461|ref|XP_010047312.1|2.7e-3250.3PREDICTED: UPF0587 protein C1o... [more]
gi|586759048|ref|XP_006853923.1|3.0e-3146.5PREDICTED: UPF0587 protein C1o... [more]
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BLAST of Spo24103.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q9D3_SPIOL6.3e-8998.7Uncharacterized protein (Fragm... [more]
A0A0K9RW51_SPIOL5.3e-3551.3Uncharacterized protein OS=Spi... [more]
A0A0J8CWI0_BETVU6.9e-3552.7Uncharacterized protein OS=Bet... [more]
A0A059CLE0_EUCGR1.9e-3250.3Uncharacterized protein OS=Euc... [more]
U5CZG3_AMBTC2.1e-3146.5Uncharacterized protein OS=Amb... [more]
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BLAST of Spo24103.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
U587_NEMVE1.1e-1430.8UPF0587 protein v1g245604 OS=N... [more]
U587_DROME4.3e-1430.6UPF0587 protein CG4646 OS=Dros... [more]
CA123_HUMAN9.6e-1428.0UPF0587 protein C1orf123 OS=Ho... [more]
CA123_BOVIN1.6e-1328.0UPF0587 protein C1orf123 homol... [more]
CA123_RAT1.6e-1328.0UPF0587 protein C1orf123 homol... [more]
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BLAST of Spo24103.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G32930.23.3e-2841.4unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008584Protein of unknown function DUF866, eukaryoticPANTHERPTHR12857UNCHARACTERIZEDcoord: 11..156
score: 1.5
IPR008584Protein of unknown function DUF866, eukaryoticPFAMPF05907DUF866coord: 46..152
score: 2.3
NoneNo IPR availableunknownSSF141678MAL13P1.257-likecoord: 43..152
score: 2.75

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0007165 signal transduction
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0010229 inflorescence development
biological_process GO:0048825 cotyledon development
biological_process GO:0045176 apical protein localization
biological_process GO:0048513 animal organ development
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005770 late endosome
cellular_component GO:0005886 plasma membrane
molecular_function GO:0000822 inositol hexakisphosphate binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004871 obsolete signal transducer activity
RNA-Seq Expression