Spo24140 (gene)

Overview
NameSpo24140
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_113 : 1951966 .. 1952193 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCCGTCTTGCCGACGTTATCATCGGAAGAGGAAAACCCATGAAAACTCTCCGTTTTTTTTGAACCCATCAAACCAGAAACTCAATCAAATAAACAGAAAACCCAGAAACGCAACCAAAAAACCCAGAAACTCAACCCAGGAACTCAACCCAGAAACTCAACCCAGAAACTCAACCAAGATCAATCAAAACCCAGAAAAACGCAAAAACTCAACGATCGAATAA

mRNA sequence

ATGACTCCGTCTTGCCGACGTTATCATCGGAAGAGGAAAACCCATGAAAACTCTCCGTTTTTTTTGAACCCATCAAACCAGAAACTCAATCAAATAAACAGAAAACCCAGAAACGCAACCAAAAAACCCAGAAACTCAACCCAGGAACTCAACCCAGAAACTCAACCCAGAAACTCAACCAAGATCAATCAAAACCCAGAAAAACGCAAAAACTCAACGATCGAATAA

Coding sequence (CDS)

ATGACTCCGTCTTGCCGACGTTATCATCGGAAGAGGAAAACCCATGAAAACTCTCCGTTTTTTTTGAACCCATCAAACCAGAAACTCAATCAAATAAACAGAAAACCCAGAAACGCAACCAAAAAACCCAGAAACTCAACCCAGGAACTCAACCCAGAAACTCAACCCAGAAACTCAACCAAGATCAATCAAAACCCAGAAAAACGCAAAAACTCAACGATCGAATAA

Protein sequence

MTPSCRRYHRKRKTHENSPFFLNPSNQKLNQINRKPRNATKKPRNSTQELNPETQPRNSTKINQNPEKRKNSTIE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24140.1Spo24140.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo24140.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24140.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24140.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24140.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0006863 purine nucleobase transport
cellular_component GO:0009706 chloroplast inner membrane
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo119640.69Barchart | Table
Spo266880.68Barchart | Table
Spo188440.67Barchart | Table
Spo120050.65Barchart | Table