Spo24150 (gene)

Overview
NameSpo24150
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 26167806 .. 26168589 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCTGATCAATTTTCTGAATTCTTTGCTGAAATTGGTCAAGTTAATACAAAGAAAACAAGAAACGATTATGATAGAGGAGAGAGAGGTACGTAATTTATTTTTCTTTTCATGATAACAAATCAGGTACGCATTTTCTGGAGGTAGAATGAGGGAAAAATGTAGGTGACCAGTTTTTAGAGTTAACCTGTTAACCTAAAGTGTTTTAAGAAGGGAAACATATGCTTGAGATTAATCTAAAATAATTACTCCGTATTAGTTGAGATTAATATTGAAAGACCACACATAATTAAGATTAATAATATTAATTTTTCCTTTTTTTATTGTTTACCAAAGGAAAAGTACAATTACACAAACTTACCGAGGAGAATAACCAAAAAAATGAAAACAGTATAGCAATTTTTCGTCAATCACCGTGATTGCTTGACCTTCTCTCTTCATAATCCAGCAGCCTGCTTAGAACATAAAACATTTTCAAAATTTTGTGTGATAAAACTCCAAAGATCACAAAATTCTTACATCACTTTAATTTCCAACTCAGAAATGGCGGTAACTTTCTCAGATCTCTCTCTTTCTCTGTCCTCTTTTATGTTAATTGCATCACTCACTCTCTCTTCTTCCAGGATTCGTCCGGCATGACGTTGATGGATCTGATGACGTCGGACCCGAAGGCGGCGCCGCCACAATCGTCGTCGTCTTCGTCGTCGGCACCTGCGCCAATGCAAATGGCGGCGTCTACGACGATGCCACCGCCCTCATCGTTAGGGAAACCAGTTACTGA

mRNA sequence

ATGACTTCTGATCAATTTTCTGAATTCTTTGCTGAAATTGGTCAAGTTAATACAAAGAAAACAAGAAACGATTATGATAGAGGAGAGAGAGGATTCGTCCGGCATGACGTTGATGGATCTGATGACGTCGGACCCGAAGGCGGCGCCGCCACAATCGTCGTCGTCTTCGTCGTCGGCACCTGCGCCAATGCAAATGGCGGCGTCTACGACGATGCCACCGCCCTCATCGTTAGGGAAACCAGTTACTGA

Coding sequence (CDS)

ATGACTTCTGATCAATTTTCTGAATTCTTTGCTGAAATTGGTCAAGTTAATACAAAGAAAACAAGAAACGATTATGATAGAGGAGAGAGAGGATTCGTCCGGCATGACGTTGATGGATCTGATGACGTCGGACCCGAAGGCGGCGCCGCCACAATCGTCGTCGTCTTCGTCGTCGGCACCTGCGCCAATGCAAATGGCGGCGTCTACGACGATGCCACCGCCCTCATCGTTAGGGAAACCAGTTACTGA

Protein sequence

MTSDQFSEFFAEIGQVNTKKTRNDYDRGERGFVRHDVDGSDDVGPEGGAATIVVVFVVGTCANANGGVYDDATALIVRETSY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24150.1Spo24150.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo24150.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24150.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24150.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24150.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006554 lysine catabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0034968 histone lysine methylation
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005694 chromosome
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005634 nucleus
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0042393 histone binding
molecular_function GO:0018024 histone-lysine N-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression