Spo24214 (gene)

Overview
NameSpo24214
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionIron-sulfur cluster assembly protein IscA
Locationchr2 : 47332958 .. 47340051 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAGATCAATATTAGCTCGTGTTTCTTCAAATTTCGCTTTTCGAATCCGCCATAATCACAGAATTCTCACCTCCAATTCCAATTCATTTTCTTCATCTTCATCTGCTGCCGTTTCAGATTCTTCACCTTCCCCTTCTTCGTCCGCAGATGACGTCCATATTACTGACAGCTGTGTTCGGGTTATCTTTCTCTCTCTTCGCTTTTGTTTTTGTTACAATTTCTGGTTTAAATTTCCATTTCTCAACTTTTTTACTTAATTATAGTATTCAATTCTCTGATTTATGTCAAGTATTTGAATAAATATGGAGTATTTGATTAAAGTTGTAGGAATTACTGGAATTCTGCTTTTAATTGTGAGGTTTATCTTTATGCTATTGATGATGATTATTTACATCCTAAGTTCTAATTTTCATCCATTGGTGATAAAACCACATGGTTATTGTGACCTATGTTGATGATGTGTTGATTGTTAGGGAAGTTAACATTATTTAGGGTTTTGAATTTTGGAGTGTTTGATTTTTTAGGAATAAATGTGTGGATTGAGTTGGAAAATTTTGAATTGTGATGGTATTGAACTTTGGAAAAGTATAATTCAATACCTGTGATTTGTTTATAGTGCAAATAACACGGCAATTTCGTAATTAAATCGGTAGGAAAACTAAAAAGATGGTGGAAATAAAAAAGAAACGAATAAGTAAATTAAATGAATAAAAAATTTAGGTAAAATGAATATAATATAAAGTTAAATGAATAAAACTTGAAGTTAAATGTATATCTTGAAAGTATACTTATTTACGATTATGCAATGTGATTTGTATTGTTTATCAATAACCATTATTGATTTGGAATCATCCTTTAACTTTACATGTTTAGATTAAGTTTCCGAGGTTAAGACAAACATGCTGCGAATCAAGCCTTTTTAAGGTAGTTGACGAATTAGATAATCTGACTAATCGTATTGTTTTAGGGGGATCCACCTAAATATATTGACCTAGCTAAGAATATTTATCAATATATGTATTGAGATGTGAAAACAAATGTTACGACTTTTGGAGAAGTCACAAAGAATTTCCTATTACAATTAGACTACTCCAAGGCCATGCATCAAGTCCTTTCCTCTTCGTAGCAGCTTAAGATGAACTAACATGATTTATCTAGGATGACATATTGCGGTGTTTGTTATTTGTGGATGATATGAAATTGGTGGATGAGGTTAGAGCCAGGGTAAATGCTAAGTTGGAGCAATAGAGATAGAAGCTAAAATCCTGAGGGTTAAGGGTTTAGGCTAAGTTGAAGTAAAACTACATGGTCTGTCAATTATTGGAAGGAGACAAGAGAGGAAAGCGTTATATTAGATGGTAAAATTTTTACCCCTAACCGAGTGGTTTAACTACCTTAGTTGATTTTACAAAGGAATTCAGTGCCTCGGTTTAATTTTCAAAGGAATGGAGGTATTGACCAAGATGTGACTCTTGGCTCTAATAGAGAGTGGTGTATCCAGGATTATCAAACAGGCTATGCACAATCAATAAATGAGTATATATCAAAATCGCTTACTCCACTCTTCAGGCGTCGTTCATATCTTGTTTAAGTTAATTTTTGACTTTGATTTATGGGGATTGAAGTTGAATATGGAATTAAGAACTATTCTCGTCTCAGAAGAACAAAAAATGAGTAATGCAATTAAATAATCATCAATAATAACAATTCCGAGTAATGTGTAACTTGATCCGATAAAAACAAAAAGTATGCAAATAAGCAATTTTTTTTTTTGGATAAGGAAATAAAACAAGGCACACAACCTTAATCATTATTTCGGATGAATTACAACGACTCAAAGACTAAGGCCGGTAAACGAAAAATGAGTACAAAGAATACAATGGAAATACACTCTAGTCCCGAACTACCCCAACCCCAGTTCCAAATAATTTGGTGAATAGACTATAATACTCCAGGCCTAACACTCAACTACTAGGTAACCGGTAAGACATCTGAAAATCAAAAGTGCTAAAATAATTAAAGTGCAAAAGCTAATCAAAATACAAATCGTACTCTGGACCTTCCTGTTCTTACCCTTGCACCAATACCACTAGACTGAGACCATATATCTTGTATCTATTTGAATTAAATATTTTTTTAACTTCGTACAGGGGTATACAAATGTCTACCCATAATGCATACAGATCCGCCCCTGACAGCAAGTGTGTCCATAGCTTATTTTTCAGGTTAAACATAAATTCTACTAACCAGTGTTACTATATGGGTCAAAATGTTAAAATTTTAGGAAGGATCATGTTAATAAGATGAATGTAACACAAATTTGTATGTTAAATGGATGTGTAGGAACATCTAAGGGGGAGAATTTGAAAAAAAGGATACTCAAAGTAAGATGGGAGTTGCAGGTTGTGAGGATAAAGTTGGTTTATTGAATGGAAAAGTTCAGCAATTAAGGGGTAGCGTACACACTGTTGCTTTCATGGACAGTTTGTGAGCTTCTGAAGCAGAGAAGTTACCTAGAGTATGGTTTCTTTTATGCTGGCATCTTTTGTATGTTCTGTATCTGCTTCTGTTCAATGTGGATGCCTTATGTTTGGATCCGAAAGCGTAGGAAATCGAATGTTAAAGGCTGGCATCAATAATTACACCCCCCCCCCCCCCTCCATACACACACGAAAATGTGTGATTAAAAAAATATATGAATTTGGTTGAGTAGTTGTAACTTTTTTAGGGATGATAAATCAAACCAGTGGTTAGATGAGAGAGAGAACAACTTTATTTGTGGTAAACCAAATTGAATATCATTACCTATGTACAAGGGTTAGACAAAATTAAGTAGTCTAAGTTATTTCCCTAACATTATAACATGAAGCGGCCAAGCGGGTTGAAAAGAACTATTCTATGGAGTTTCCTTTCAGTTATTACTCAAAAATTACTCGCTGTGCAATGAGTAGTACTGAACATCAGTGAACTAGATGATTCGGGGATAAGGAGAAAACTGGCATTGGTTTAATTTGAAAGCCTTTGCTTGGCTTGGATGCTTACGTTAGAGAGTATATTCAGATTGCAAATCTGCGGGAGGAGGGGTTTTATTCTGTCAAGTTGTCAGCATGCTCATAGCCAACGTTACCAGATTCGCGGGTACCCCCTGAGAATCTCGAACCGGTCCGCCCGTACTGAATCGGGTTCTCCAGCGACCCAATTCGCTGTGGTTTGCGAACCAAATCGTTGGTATTGTCATGTCGAATCCAAAACCCTAGTTATTGCTATTGAAGGTCAGGGAAGACAAGAGAAGAAAATATATGTTGGGGCTTTTATTTGGGAAGGAAATAACATGTTATTTGAGTATGAATGTATGAGTATTAAAATAAAATCTTGAACAATTTTGTTTTTAAAAATCCATGAAAAAAAGAGTTCTAAACCCCTCTTTTTCGAACCTAAAACCAGCCAACCCGTGAATTGCGAACCTGAATCGTACCCCGTACCGAAGCGAACCACGAATCAGGTAACCCTGCTCATGGCAGAAACGTAGGGGTATGTTTTGTGCAGGATTCTGGTTTCACATCAAGTTGTCTCTACTTCTGTAATAATCATACTTAATATATATATTCAAAGAGTTGGAGCCGCTCCAATTCCCAGCAATGCTTAACATATATATTCTAAGAGTTGGAACAGCTGAAGCTGCAAAAACAACTTCCTTAGACAGTGGGAACAGGAGGGACAGATTCCTTCCCTATTGATCAATTTTGTTTTGGGGAGGGGGGCTGTATATGTCGTGACGTATTACTTAAAACTATGTGTCACACTGTCACTGTATTGCTAGTACTAAAATTGTGATCGTACAATAGGGTTATTGAAGTATGTCTTTTAGCGTAGCACTATGTCCTTTTATGGATATTTTGACTGACCTTAAGAGTGATGCATTTCAGAGGATGAAAGAATTGCAAGCTAGTGAGAATGGGAATAAGATGCTTCGCCTTAGTGTGGAAGCTGGTGGATGTTCTGGGTTTCAATATGCCTTTGTACTGGATGATAACAAACACAATGATGACAGGTAGTGAGGGTGTTTCTTGATTTTGTGTTTTGTTTCCCGAGAATGGCTCTTTTGCTTATTTTGCTTGTAGTTCTAATTCTAATTTAAAATTTATTTGTTAGGTGATTTTCCATGTGATTAGCTTTGTGTTATATCTCTCATGCCTATGATTTCTCTATGGATTTGTTTGTTCGGATTCAGATGAAGTTTATTTGGCGTTTTATTGTATAAGTAGCTAAGTATTACAAACTAATGATAACGTGTGCATATTTAATATTTGTAGAGTTTTTGAAAAGGATGGTGTCAAATTGGTGATCGATAAAATTTCTTACGACTTTGTGAAAGGTGCCTGTGTTGATTATGCCGAGGAGCTTATTCGTTCAGCATTCCAGGTCAGTCTTTTTTGTTTGAGAAGTTTGTTACAGAGTACTCCCTCTGCCCCAAATTACTTGCCTCAGCTTGGTTGGACACGCTTGCCAATGCACAACTTTGGCTACCAATATCTTTAATTACATTTTAGAAAAACTTATAAAATGTTAATATTCTGAAAATATATGTTAAAGATGAAACCAATAGTATTATTACATACGGAGTACTAACTTTTGTTTTCATAAACTTGGAATTAAAACATGGTCAAAGTGTATGCAAATAGTGATAAAGTCAAAATAGTGCAAGTAATTTGGGGACGGATGGAGTATATAATATGCGGACCTGTGATTTCAAAGCCTTGTTCCACGTAAAGTTGTACACATATAGAACTCTCAAATATTTCCAACGGTTGGATTGATGGTCAATTTAGGTACTTTAGCAGTTAGCCTATTACTCCGGTATTATGTTGGAAGAAACATTTCCCCTTTTCTGTACTGTGGCTGCAAACCTTGATGTATATTGCTGAAATGGTTACATTTACACCCTTGGTTTGAATGAAAATTTCTGCATTAGATATTTCAAAAGCTTTAAGAAAAATCATATGGACTTGTCACTTTTAATGTCTCATGCAGAGTACCCTCATTTTAACCTGTAGGTGATGACATGGTGTAGGTGATGACTTGTCTGTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTATATAAGCTTAACATACATAATTTAAAAGTTTTACACACCTACAAAACTAAAACAACACTAAGGTCTTTAAATACTACTCCCTCCGTTCCTAAATAAGTGTCCAGTTCCCATAAATAGCGTTCCCTTATAAGTGTCCAGTTTCCATTTTTGGACATACACCTTTTCCACTTTTCTATACACTTTTCCCACTTTTCCATACACTTTTCCCACTTTTCTATAAATCATTGTTATTTTTTCTTACACATTCTACACTTTTACTACTTTTCAATCACCACATCCACTTTTATATATACTTTAACAATAAACAATTATTTACTTTTTCCTTTCCCAATAAAAAAACATTCTCAATCATTACCTCTTACACACAATTCAGTTTTATTAAATCCCGCGTAAATGTCCAAAGTGGACACTTATTTAGGAACGGAGGGAGTATTACACCTACTACAATAACAAAAACGAAAGACATAAACTTCGAAAAGGTAGCATGTCAGTGTTTTAACAGAAATTTTGTAGGTTTTACTCCCTCCGTATTTTTTTAAGAGATACACTTGGCCGGGGACGGATATTAAGAAGAATAATTGAATGAAATAAAATAATAAAACAAGTGGAGTTGGATATATATTTTAATAATTAAATATGTGGGGACCATGTCATTTTGGTGGGTGGAGGGTGAGGTGAGTTTATGAAAATATTTGTTTAATAGGATGGTGGGTGATAGGTATATTAGATGTATTATTTAATTAGATGGTGGGGTTGATAAGTTACTAAAAATGGCAAGTGTATCCCTTAAAAAAATACGGAGGGAGTATGTTATTAATGTATGATTCACCTTTTGTCTATTCTGTCATATGATTCACCTTTAGCTCTTACAATATTTTTTATAATATATATATATATATATATATATACATTTTTCTCTCATTTCACTTTCATTAATTCCACTTTCTCTTTCTTGTTTTCCTTATTATGTCTTGCTCCTTTCTGGTTTGATTGGTGACAATGACGATCTCCTACGACGATTCATGTTAGCCGACCCCAAATCATTTTGGGACTAAGGCTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCATGTGATCATGAAGTTTTACCACACTTAGAATTTGTTGAACAATGGAAGAGTGATAGGTTGATTGGCACTACCAGTCAGTTAATTTGACATCCGATGTCCACAGAATTTATCAAGTATTGAGAGAATTTTACTTCCTTCTAAAGCCTGACCCGACATGAAAAAAGCACGGGCCGGTACGAGCACGAAGTCGTGGGCCGAGCTTGAGTCTATTTCTTTGGAAAAGGCACGGCAAGGCATGACTTGACCCGACAAATTTAGTAAAATTAGGCTTATGCATGATGGCCTGGCCCAACACAACAGCCTGTGGGTGTGGTCCGTGTTTCAAACTTTTCAACCCGGCCCAACATGGCTGCCATGCGCATGGGCCGGGTTTTGAACATATCAGCCCGGCCCGGCACAGTGCAGGGTGTGCATGGCTTGTGCCGGCCCGGCCCACAACCATTTTTAGAATATAGTGTGACTTCCCATTTTTGCTGCTGCTTTTTTGTTTTTGTTTTTTGGCAAGATGTATGAATCGGTAGCTAAATGGGTCTGAATGTGTTAAACAAGCAGGTAATTGAAAATCCAAGCGCTGTAGGTGGATGCAGTTGTAAAAGTTCCTTCATGGTGAAGCTGTAGTTCACTTCAAACTTCATACAATACTTGTATTGGGTCATGGAATATTCCGATTTTTATGTATAATAACGTTTATCAATAAGGGGATATTATTATTATGTATAATTTCCTAATTACTTGTAATGACTTCAACTAATAATAGATTAACTATACGTAAAATTGAAATCCAACTGAATACTTCATACATTTAAAAATCAACTATGAGTAATTTTTGATTTGAAGAATTACACTGAATTTCGCATTTAAT

mRNA sequence

ATGGCAACAAGATCAATATTAGCTCGTGTTTCTTCAAATTTCGCTTTTCGAATCCGCCATAATCACAGAATTCTCACCTCCAATTCCAATTCATTTTCTTCATCTTCATCTGCTGCCGTTTCAGATTCTTCACCTTCCCCTTCTTCGTCCGCAGATGACGTCCATATTACTGACAGCTGTGTTCGGAGGATGAAAGAATTGCAAGCTAGTGAGAATGGGAATAAGATGCTTCGCCTTAGTGTGGAAGCTGGTGGATGTTCTGGGTTTCAATATGCCTTTGTACTGGATGATAACAAACACAATGATGACAGAGTTTTTGAAAAGGATGGTGTCAAATTGGTGATCGATAAAATTTCTTACGACTTTGTGAAAGGTGCCTGTGTTGATTATGCCGAGGAGCTTATTCGTTCAGCATTCCAGGTAATTGAAAATCCAAGCGCTGTAGGTGGATGCAGTTGTAAAAGTTCCTTCATGGTGAAGCTGTAGTTCACTTCAAACTTCATACAATACTTGTATTGGGTCATGGAATATTCCGATTTTTATGTATAATAACGTTTATCAATAAGGGGATATTATTATTATGTATAATTTCCTAATTACTTGTAATGACTTCAACTAATAATAGATTAACTATACGTAAAATTGAAATCCAACTGAATACTTCATACATTTAAAAATCAACTATGAGTAATTTTTGATTTGAAGAATTACACTGAATTTCGCATTTAAT

Coding sequence (CDS)

ATGGCAACAAGATCAATATTAGCTCGTGTTTCTTCAAATTTCGCTTTTCGAATCCGCCATAATCACAGAATTCTCACCTCCAATTCCAATTCATTTTCTTCATCTTCATCTGCTGCCGTTTCAGATTCTTCACCTTCCCCTTCTTCGTCCGCAGATGACGTCCATATTACTGACAGCTGTGTTCGGAGGATGAAAGAATTGCAAGCTAGTGAGAATGGGAATAAGATGCTTCGCCTTAGTGTGGAAGCTGGTGGATGTTCTGGGTTTCAATATGCCTTTGTACTGGATGATAACAAACACAATGATGACAGAGTTTTTGAAAAGGATGGTGTCAAATTGGTGATCGATAAAATTTCTTACGACTTTGTGAAAGGTGCCTGTGTTGATTATGCCGAGGAGCTTATTCGTTCAGCATTCCAGGTAATTGAAAATCCAAGCGCTGTAGGTGGATGCAGTTGTAAAAGTTCCTTCATGGTGAAGCTGTAG

Protein sequence

MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24214.1Spo24214.1mRNA


Homology
[Close]
BLAST of Spo24214.1 vs. NCBI nr
Match: gi|902184301|gb|KNA10282.1| (hypothetical protein SOVF_145670 [Spinacia oleracea])

HSP 1 Score: 308.1 bits (788), Expect = 8.800e-81
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC 60
           MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC
Sbjct: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC 60

Query: 61  VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY 120
           VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY
Sbjct: 61  VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY 120

Query: 121 DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL
Sbjct: 121 DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 161
[Close]
BLAST of Spo24214.1 vs. NCBI nr
Match: gi|731345074|ref|XP_010683733.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 250.4 bits (638), Expect = 2.200e-63
Identity = 131/164 (79.88%), Postives = 148/164 (90.24%), Query Frame = 1 

		  

Query: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSS-SSSAAVSDSSPSPS---SSADDVHI 60
           MATRS ++R+SSNFA RIRHN RI++S+S+SF+S SSS+A+ DSS SPS   SS DD+HI
Sbjct: 1   MATRSFISRISSNFALRIRHNQRIISSSSSSFASFSSSSALPDSSSSPSPSPSSTDDIHI 60

Query: 61  TDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVID 120
           TD+CV+RMKELQASEN NKMLRLSVEAGGCSGFQYAF LDD  +NDDR+FEKDGVKLV+D
Sbjct: 61  TDNCVKRMKELQASENANKMLRLSVEAGGCSGFQYAFALDDKNNNDDRIFEKDGVKLVVD 120

Query: 121 KISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           KISYDFVKG+ VDY EELIRSAFQVIENPSAVGGCSCKSSFMVK
Sbjct: 121 KISYDFVKGSSVDYVEELIRSAFQVIENPSAVGGCSCKSSFMVK 164
[Close]
BLAST of Spo24214.1 vs. NCBI nr
Match: gi|658057447|ref|XP_008364500.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Malus domestica])

HSP 1 Score: 203.4 bits (516), Expect = 3.000e-49
Identity = 114/157 (72.61%), Postives = 125/157 (79.62%), Query Frame = 1 

		  

Query: 6   ILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAA--VSDSSPSPSSSADDVHITDSCVRR 65
           IL R++  FA RIR N R+L+S S  +SSSSSAA   S SSPSPS   D VH+TD+CV+R
Sbjct: 8   ILHRLTPYFAARIRQNQRLLSS-SFFYSSSSSAAEEASSSSPSPSVDLDSVHMTDTCVQR 67

Query: 66  MKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYDFV 125
           MK+LQASE   K+LRLSVE GGCSGFQY F LDD  H DDRVFEK GVKLV+D ISYDFV
Sbjct: 68  MKQLQASEAEGKVLRLSVETGGCSGFQYVFDLDDKSHPDDRVFEKGGVKLVVDNISYDFV 127

Query: 126 KGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           KGA VDY EELIRSAFQV  NPSAVGGCSCKSSFMVK
Sbjct: 128 KGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 163
[Close]
BLAST of Spo24214.1 vs. NCBI nr
Match: gi|694430095|ref|XP_009342546.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 199.5 bits (506), Expect = 4.400e-48
Identity = 112/158 (70.89%), Postives = 124/158 (78.48%), Query Frame = 1 

		  

Query: 6   ILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAV---SDSSPSPSSSADDVHITDSCVR 65
           IL R+   FA RIR N R+L+S+   F SSSS AV   S SSPSP+   D VH+TD+CV+
Sbjct: 8   ILHRLVPCFAARIRQNQRLLSSSF--FYSSSSFAVEEASSSSPSPALDLDSVHMTDACVQ 67

Query: 66  RMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYDF 125
           RMK+LQASE   KMLRLSVE GGCSGFQY F LDD  H DDRVFEK+GVKL++D ISYDF
Sbjct: 68  RMKQLQASEVEGKMLRLSVETGGCSGFQYVFDLDDKHHPDDRVFEKEGVKLLVDNISYDF 127

Query: 126 VKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           VKGA VDY EELIRSAFQV  NPSAVGGCSCKSSFMVK
Sbjct: 128 VKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 163
[Close]
BLAST of Spo24214.1 vs. NCBI nr
Match: gi|702297171|ref|XP_010048288.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Eucalyptus grandis])

HSP 1 Score: 199.1 bits (505), Expect = 5.800e-48
Identity = 107/161 (66.46%), Postives = 128/161 (79.50%), Query Frame = 1 

		  

Query: 2   ATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCV 61
           ++ S++ R++  FA RI+ NHR+L       SSSS++A+ + S SPS S DDVH+TD+C+
Sbjct: 52  SSMSLMKRMNPFFAGRIQENHRLL-------SSSSASALHEVSSSPSPSVDDVHMTDACI 111

Query: 62  RRMKELQASENG--NKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKIS 121
           +RMKELQA+E     KMLRLSVE GGCSGFQY F LD+  ++DDRVFEKDGVKLVID IS
Sbjct: 112 QRMKELQAAEGSLKEKMLRLSVETGGCSGFQYVFDLDEKANSDDRVFEKDGVKLVIDNIS 171

Query: 122 YDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           YDFVKGA VDY EELIR+AFQV  NPSAVGGCSCKSSFMVK
Sbjct: 172 YDFVKGATVDYVEELIRAAFQVTANPSAVGGCSCKSSFMVK 205
[Close]
BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSL0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145670 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.100e-81
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC 60
           MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC
Sbjct: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSC 60

Query: 61  VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY 120
           VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY
Sbjct: 61  VRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY 120

Query: 121 DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL
Sbjct: 121 DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 161
[Close]
BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EUB9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g159490 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.500e-63
Identity = 131/164 (79.88%), Postives = 148/164 (90.24%), Query Frame = 1 

		  

Query: 1   MATRSILARVSSNFAFRIRHNHRILTSNSNSFSS-SSSAAVSDSSPSPS---SSADDVHI 60
           MATRS ++R+SSNFA RIRHN RI++S+S+SF+S SSS+A+ DSS SPS   SS DD+HI
Sbjct: 1   MATRSFISRISSNFALRIRHNQRIISSSSSSFASFSSSSALPDSSSSPSPSPSSTDDIHI 60

Query: 61  TDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVID 120
           TD+CV+RMKELQASEN NKMLRLSVEAGGCSGFQYAF LDD  +NDDR+FEKDGVKLV+D
Sbjct: 61  TDNCVKRMKELQASENANKMLRLSVEAGGCSGFQYAFALDDKNNNDDRIFEKDGVKLVVD 120

Query: 121 KISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           KISYDFVKG+ VDY EELIRSAFQVIENPSAVGGCSCKSSFMVK
Sbjct: 121 KISYDFVKGSSVDYVEELIRSAFQVIENPSAVGGCSCKSSFMVK 164
[Close]
BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Match: A0A059CQ99_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01891 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.000e-48
Identity = 107/161 (66.46%), Postives = 128/161 (79.50%), Query Frame = 1 

		  

Query: 2   ATRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCV 61
           ++ S++ R++  FA RI+ NHR+L       SSSS++A+ + S SPS S DDVH+TD+C+
Sbjct: 52  SSMSLMKRMNPFFAGRIQENHRLL-------SSSSASALHEVSSSPSPSVDDVHMTDACI 111

Query: 62  RRMKELQASENG--NKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKIS 121
           +RMKELQA+E     KMLRLSVE GGCSGFQY F LD+  ++DDRVFEKDGVKLVID IS
Sbjct: 112 QRMKELQAAEGSLKEKMLRLSVETGGCSGFQYVFDLDEKANSDDRVFEKDGVKLVIDNIS 171

Query: 122 YDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           YDFVKGA VDY EELIR+AFQV  NPSAVGGCSCKSSFMVK
Sbjct: 172 YDFVKGATVDYVEELIRAAFQVTANPSAVGGCSCKSSFMVK 205
[Close]
BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MTF5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.200e-47
Identity = 108/160 (67.50%), Postives = 126/160 (78.75%), Query Frame = 1 

		  

Query: 3   TRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVR 62
           +RS++ R+S  F  RI+ NH++L+S   SFSSSSSA    SS SPS S D VH+TD+C++
Sbjct: 10  SRSLIQRISPFFIARIKQNHKLLSS---SFSSSSSALHEASSESPSPSLDAVHMTDNCIK 69

Query: 63  RMKELQASENGN--KMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISY 122
           RMKELQASE  +  KMLRLSVE GGCSGFQY F LDD  + DDRVF ++GVKLV+D ISY
Sbjct: 70  RMKELQASEQSSDHKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISY 129

Query: 123 DFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           DFVKGA +DY EELIRSAF V  NPSAVGGCSCKSSFMVK
Sbjct: 130 DFVKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVK 166
[Close]
BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G158400 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 1 

		  

Query: 3   TRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVR 62
           +RS++ R+S  F  RI+ NH++L+S   SFSSSSSA    SS SPS S D VH+TD+C++
Sbjct: 10  SRSLIQRISPFFIARIKQNHKLLSS---SFSSSSSALHEASSESPSPSLDAVHMTDNCIK 69

Query: 63  RMKELQASE-NGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYD 122
           RMKELQASE + ++MLRLSVE GGCSGFQY F LDD  + DDRVF ++GVKLV+D ISYD
Sbjct: 70  RMKELQASEQSSDQMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISYD 129

Query: 123 FVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVK 161
           FVKGA +DY EELIRSAF V  NPSAVGGCSCKSSFMVK
Sbjct: 130 FVKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVK 165
[Close]
BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.400e-46
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 1 

		  

Query: 3   TRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVR 62
           +RS++ RV+   A RIR NHR+L  N +S S+   A+ S SS   SSS D VH++D+C+R
Sbjct: 2   SRSLVKRVAPYLAGRIRENHRLL--NFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIR 61

Query: 63  RMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYDF 122
           RMKELQ+SE   KMLRL VE GGCSGFQY F LD+  + DDRVFEK+GVKLV+D +SYD 
Sbjct: 62  RMKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDL 121

Query: 123 VKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           VKGA +DY EELIR+AF V  NPSAVGGCSCKSSFMVKL
Sbjct: 122 VKGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVKL 158
[Close]
BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Match: ISCA2_BOVIN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.700e-29
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 1 

		  

Query: 43  SSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHND 102
           S  SP +    +H+TDSCV+R+ E+     G++ LRL VE GGCSGFQY F LD   + D
Sbjct: 37  SFSSPEAGEGQIHLTDSCVQRLLEIT---EGSEFLRLEVEGGGCSGFQYKFSLDTVINPD 96

Query: 103 DRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DRVFEK G ++V+D  S  FVKGA VD+++ELIRS+FQV+ NP A  GCSC SSF VKL
Sbjct: 97  DRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVKL 152
[Close]
BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Match: ISCA2_PONAB (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.700e-28
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1 

		  

Query: 43  SSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHND 102
           SS SP +    + +TDSCV+R+ E+     G++ LRL VE GGCSGFQY F LD   + D
Sbjct: 39  SSSSPEAGEGQIRLTDSCVQRLLEIT---EGSEFLRLQVEGGGCSGFQYKFSLDTVINPD 98

Query: 103 DRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DRVFE+ G ++V+D  S  FVKGA VD+++ELIRS+FQV+ NP A  GCSC SSF +KL
Sbjct: 99  DRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSIKL 154
[Close]
BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Match: ISCA2_HUMAN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 1.700e-28
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1 

		  

Query: 43  SSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHND 102
           SS SP +    + +TDSCV+R+ E+     G++ LRL VE GGCSGFQY F LD   + D
Sbjct: 39  SSSSPEAGEGQIRLTDSCVQRLLEIT---EGSEFLRLQVEGGGCSGFQYKFSLDTVINPD 98

Query: 103 DRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DRVFE+ G ++V+D  S  FVKGA VD+++ELIRS+FQV+ NP A  GCSC SSF +KL
Sbjct: 99  DRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSIKL 154
[Close]
BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Match: ISCA2_MOUSE (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 3.300e-27
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 1 

		  

Query: 43  SSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHND 102
           +S  P +    + +TDSCV+R+ E+     G++ LRL VE GGCSGFQY F LD   + D
Sbjct: 39  TSSIPEAGEGQIRLTDSCVQRLLEIT---EGSEFLRLQVEGGGCSGFQYKFSLDTVINPD 98

Query: 103 DRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           DRVFE+ G ++V+D  S  FVKGA VD+++ELIRS+FQV+ NP A  GCSC SSF VK+
Sbjct: 99  DRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVKV 154
[Close]
BLAST of Spo24214.1 vs. TAIR (Arabidopsis)
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 187.2 bits (474), Expect = 8.000e-48
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 1 

		  

Query: 3   TRSILARVSSNFAFRIRHNHRILTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVR 62
           +RS++ RV+   A RIR NHR+L  N +S S+   A+ S SS   SSS D VH++D+C+R
Sbjct: 2   SRSLVKRVAPYLAGRIRENHRLL--NFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIR 61

Query: 63  RMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVIDKISYDF 122
           RMKELQ+SE   KMLRL VE GGCSGFQY F LD+  + DDRVFEK+GVKLV+D +SYD 
Sbjct: 62  RMKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDL 121

Query: 123 VKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSFMVKL 162
           VKGA +DY EELIR+AF V  NPSAVGGCSCKSSFMVKL
Sbjct: 122 VKGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVKL 158
[Close]
BLAST of Spo24214.1 vs. TAIR (Arabidopsis)
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 58.5 bits (140), Expect = 4.300e-9
Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 1 

		  

Query: 56  ITDSCVRRMKELQASENGNKMLRLSVEAGGCSGFQYAFVLDDNKHNDDRVFEKDGVKLVI 115
           ++D+   R+++L   +     LRL+VEA GC+G  Y       K   D V E+ GVK+++
Sbjct: 8   LSDTAAARIRQLLQHQQ-KPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILV 67

Query: 116 DKISYDFVKGACVDYAEELIRSAFQVIENPSAVGGCSCKSSF 158
           D  +   V G  +D+ ++ +RS F V  NP+A   C C  SF
Sbjct: 68  DPKAVMHVIGTEMDFVDDKLRSEF-VFVNPNAT-KCGCGESF 106
[Close]
BLAST of Spo24214.1 vs. TAIR (Arabidopsis)
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein)

HSP 1 Score: 54.3 bits (129), Expect = 8.100e-8
Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 1 

		  

Query: 25  LTSNSNSFSSSSSAAVSDSSPSPSSSADDVHITDSCVRRMKELQASENGNKMLRLSVEAG 84
           L  N  +  S  SA+V  ++P+       + ++++ ++ + ++++    +  LR+ V+ G
Sbjct: 44  LNLNRRNRLSVRSASVP-AAPAMEGLKPAISLSENALKHLSKMRSERGEDLCLRIGVKQG 103

Query: 85  GCSGFQYAFVLDD--NKHNDDRVFEKDGVKLVIDKISYDFVKGACVDYAEELIRSAFQVI 144
           GCSG  Y    ++  N   DD   E  G  +V D  S  F+ G  +DY++ LI   F   
Sbjct: 104 GCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSDALIGGGFS-F 163

Query: 145 ENPSAVGGCSCKSSFMVKL 162
            NP+A   C C  SF  ++
Sbjct: 164 SNPNATQTCGCGKSFAAEM 180
The following BLAST results are available for this feature:
BLAST of Spo24214.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902184301|gb|KNA10282.1|8.8e-81100.hypothetical protein SOVF_1456... [more]
gi|731345074|ref|XP_010683733.1|2.2e-6379.8PREDICTED: iron-sulfur assembl... [more]
gi|658057447|ref|XP_008364500.1|3.0e-4972.6PREDICTED: iron-sulfur assembl... [more]
gi|694430095|ref|XP_009342546.1|4.4e-4870.8PREDICTED: iron-sulfur assembl... [more]
gi|702297171|ref|XP_010048288.1|5.8e-4866.4PREDICTED: iron-sulfur assembl... [more]
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BLAST of Spo24214.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSL0_SPIOL6.1e-81100.Uncharacterized protein OS=Spi... [more]
A0A0J8EUB9_BETVU1.5e-6379.8Uncharacterized protein OS=Bet... [more]
A0A059CQ99_EUCGR4.0e-4866.4Uncharacterized protein OS=Euc... [more]
A0A0B0MTF5_GOSAR1.2e-4767.5Uncharacterized protein OS=Gos... [more]
A0A0D2QDP8_GOSRA2.0e-4767.3Uncharacterized protein OS=Gos... [more]
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BLAST of Spo24214.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ISAM2_ARATH1.4e-4664.1Iron-sulfur assembly protein I... [more]
ISCA2_BOVIN2.7e-2956.3Iron-sulfur cluster assembly 2... [more]
ISCA2_PONAB1.7e-2854.6Iron-sulfur cluster assembly 2... [more]
ISCA2_HUMAN1.7e-2854.6Iron-sulfur cluster assembly 2... [more]
ISCA2_MOUSE3.3e-2752.9Iron-sulfur cluster assembly 2... [more]
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BLAST of Spo24214.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G03905.18.0e-4864.1Iron-sulphur cluster biosynthe... [more]
AT2G36260.14.3e-934.3Iron-sulphur cluster biosynthe... [more]
AT1G10500.18.1e-827.3chloroplast-localized ISCA-lik... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisGENE3D2.60.300.12coord: 53..145
score: 1.5
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 54..154
score: 8.1
IPR000361FeS cluster biogenesisunknownSSF89360HesB-like domaincoord: 54..147
score: 1.77
IPR016092FeS cluster insertion proteinTIGRFAMsTIGR00049TIGR00049coord: 54..159
score: 2.0
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 4..161
score: 5.1
NoneNo IPR availablePANTHERPTHR10072:SF46IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 4..161
score: 5.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006014 D-ribose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006464 cellular protein modification process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030091 protein repair
biological_process GO:0006979 response to oxidative stress
biological_process GO:0045859 regulation of protein kinase activity
biological_process GO:0009723 response to ethylene
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0048440 carpel development
biological_process GO:0016487 farnesol metabolic process
biological_process GO:0050665 hydrogen peroxide biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0016926 protein desumoylation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010189 vitamin E biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0008152 metabolic process
biological_process GO:0015867 ATP transport
biological_process GO:0016042 lipid catabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0015866 ADP transport
biological_process GO:0016556 mRNA modification
biological_process GO:0055085 transmembrane transport
biological_process GO:0090351 seedling development
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005956 protein kinase CK2 complex
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0048046 apoplast
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009536 plastid
cellular_component GO:0009523 photosystem II
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005773 vacuole
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0042393 histone binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0015217 ADP transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0052669 CTP:2-trans,-6-trans-farnesol kinase activity
molecular_function GO:0052670 geraniol kinase activity
molecular_function GO:0052671 geranylgeraniol kinase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005347 ATP transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0052689 carboxylic ester hydrolase activity
molecular_function GO:0030554 adenyl nucleotide binding
molecular_function GO:0005488 binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0019887 protein kinase regulator activity
molecular_function GO:0004747 ribokinase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0043295 glutathione binding
molecular_function GO:0004363 glutathione synthase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004046 aminoacylase activity
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression