Spo24269 (gene) | SpinachBase

Overview


Name	Spo24269
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Methionine-S-oxide reductase
Location	SpoScf_01324 : 23826 .. 25072 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGATCTATAGTTGTAAAGAGTGCACAACAAACCTAAACCTAACCACAAACCGCATCTTCCCACCTAATTTCTACTTCGAAGCTGGCAACAAAAACTCTCTCTCCTTCTCATGGATCGACCCAGATAAATTCAAGTTTGAAAACGAGGACAAAATCAGACCCTTTTTTGAAACCCTAAATTATTGGGGAATTCAGAGGAAAAGAACCAAGATTATGTGCAAAAATTGTGGTAAACTTCTGGGTTATGTGTATGACGATGGCCCTCCTTTGGTTGATACTCCTGGTCAATTCCATTTTGGGCCAAGTCAAGTTATTCCCAGAAATCCCAGGTTCAGATTCAGGTCTAAGGCTTTAGTACTTACTTCTGATTCTTAATAATTGTATTGTAATTCTTCTTGTCAATTTTGCTTAGTTGTTGAATGATTGTGTTCCTTGTAATGTGTGATTGTAGAGATTACGATGTTATTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGTAATTCTTATTGTAAATTTTGTGTAATTGTTGAATGATTGTGTGCTTGTAACTAAATGGGATTTTAGAGATTGTGATTTACTTGCCGAACTCTTATTTATACTGCTAGTTCGAATTTGGTTGTCATGGGTTCGAACTACAATTATGAGACGGTGGGTGATTTGATATTTTAGTTGTGTTATTTTTGGGTTTATACCATAGTTTTTTAGCACTATCAGAAATTTTGTTTTTATGTAATTAGCTCACTAGGTATCTTAAAGCATTCCAATCAATTTCTATTTTTATTGGATGTACCGTAAGGATTTGCTAAGAATTTTGTTGGCATTATTGCCTCTATAGCTTGCTTCTCCCTAATCTATCCTCAAATAACTAAGTATAGCTCGAGATGTCAGATTTCTTTTTAGTTGCTGTATCCATAAAATATGAGAATTATTATGGCCAAGTACATATTTATCGTCTGTCAAGGAACTTTCTGTTATATCTCACTGCCGTGCCAAGTTAGAACATGTCTATGCTCATTGTTTCTGGTCATATTGTACTGTGAGTGTGTGTGAGGCTTGTATGTATGTTCTACTACTTGCTGCTGCCTGGTGAACAAGTTTCCCTGGCTTGGTTGCTTTGATTTGCAGCCAAACAGTTAGGAGGGTTTCAGCTCTGTATTTGCCGGGTGCTTATCAGGTTGGGTTTGCGTGGATGATTTGGTCTGCGCAGTGTGCTGGTTGTTGTTGA

mRNA sequence

ATGGCGACGATCTATAGTTGTAAAGAGTGCACAACAAACCTAAACCTAACCACAAACCGCATCTTCCCACCTAATTTCTACTTCGAAGCTGGCAACAAAAACTCTCTCTCCTTCTCATGGATCGACCCAGATAAATTCAAGTTTGAAAACGAGGACAAAATCAGACCCTTTTTTGAAACCCTAAATTATTGGGGAATTCAGAGGAAAAGAACCAAGATTATGTGCAAAAATTGTGGTAAACTTCTGGGTTATGTGTATGACGATGGCCCTCCTTTGGTTGATACTCCTGGTCAATTCCATTTTGGGCCAAGTCAAGTTATTCCCAGAAATCCCAGCCAAACAGTTAGGAGGGTTTCAGCTCTGTATTTGCCGGGTGCTTATCAGGTTGGGTTTGCGTGGATGATTTGGTCTGCGCAGTGTGCTGGTTGTTGTTGA

Coding sequence (CDS)

ATGGCGACGATCTATAGTTGTAAAGAGTGCACAACAAACCTAAACCTAACCACAAACCGCATCTTCCCACCTAATTTCTACTTCGAAGCTGGCAACAAAAACTCTCTCTCCTTCTCATGGATCGACCCAGATAAATTCAAGTTTGAAAACGAGGACAAAATCAGACCCTTTTTTGAAACCCTAAATTATTGGGGAATTCAGAGGAAAAGAACCAAGATTATGTGCAAAAATTGTGGTAAACTTCTGGGTTATGTGTATGACGATGGCCCTCCTTTGGTTGATACTCCTGGTCAATTCCATTTTGGGCCAAGTCAAGTTATTCCCAGAAATCCCAGCCAAACAGTTAGGAGGGTTTCAGCTCTGTATTTGCCGGGTGCTTATCAGGTTGGGTTTGCGTGGATGATTTGGTCTGCGCAGTGTGCTGGTTGTTGTTGA

Protein sequence

MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFETLNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNPSQTVRRVSALYLPGAYQVGFAWMIWSAQCAGCC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24269.1	Spo24269.1	mRNA

Homology

[Close]

BLAST of Spo24269.1 vs. NCBI nr
Match: gi|970011963|ref|XP_015066912.1| (PREDICTED: uncharacterized protein LOC107011782 [Solanum pennellii])

HSP 1 Score: 199.5 bits (506), Expect = 3.900e-48
Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKIRPFFET
Sbjct: 1   MASIYSCKECNTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ D+PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTDSPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. NCBI nr
Match: gi|565347544|ref|XP_006340785.1| (PREDICTED: peptide methionine sulfoxide reductase MsrB [Solanum tuberosum])

HSP 1 Score: 198.7 bits (504), Expect = 6.700e-48
Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKIRPFFET
Sbjct: 1   MASIYSCKECHTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ D+PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTDSPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. NCBI nr
Match: gi|698576920|ref|XP_009776335.1| (PREDICTED: uncharacterized protein LOC104226139 [Nicotiana sylvestris])

HSP 1 Score: 197.6 bits (501), Expect = 1.500e-47
Identity = 86/116 (74.14%), Postives = 99/116 (85.34%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL T  ++PP+FYFEAGNK +LSFS +D  KFKFE EDKIRPFFET
Sbjct: 1   MASIYSCKECGTNFNLHTTYLYPPDFYFEAGNKGTLSFSAVDSTKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNPSQTVR 117
           +NYWGIQRKRTK+MC NCGKL+GYVYDDG P+ D+PGQFHFGPSQVIPR P   ++
Sbjct: 61  INYWGIQRKRTKMMCMNCGKLVGYVYDDGAPMTDSPGQFHFGPSQVIPRAPRYRIK 116

[Close]

BLAST of Spo24269.1 vs. NCBI nr
Match: gi|460373438|ref|XP_004232526.1| (PREDICTED: uncharacterized protein LOC101245715 [Solanum lycopersicum])

HSP 1 Score: 196.8 bits (499), Expect = 2.600e-47
Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKI+PFFET
Sbjct: 1   MASIYSCKECNTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIKPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ ++PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTESPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. NCBI nr
Match: gi|357483933|ref|XP_003612253.1| (methionine-S-oxide reductase [Medicago truncatula])

HSP 1 Score: 195.7 bits (496), Expect = 5.700e-47
Identity = 86/111 (77.48%), Postives = 96/111 (86.49%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IY+C EC TNLNL T+  +PP+FYFEAGNKNS+SFS ID  KFKFE EDKIRPFFET
Sbjct: 1   MASIYTCSECNTNLNLNTSYTYPPDFYFEAGNKNSISFSTIDATKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNP 112
           +NYWGIQRKRTKI C NC  L+GYVYDDGPPL++TPGQFH GPSQVIPR P
Sbjct: 61  INYWGIQRKRTKIKCNNCNHLVGYVYDDGPPLINTPGQFHMGPSQVIPRAP 111

[Close]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HFS1_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.700e-48
Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKIRPFFET
Sbjct: 1   MASIYSCKECNTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ D+PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTDSPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Match: M0ZW88_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003664 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.700e-48
Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKIRPFFET
Sbjct: 1   MASIYSCKECHTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ D+PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTDSPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Match: K4BAK4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.800e-47
Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSCKEC TN NL TN +FPP+FYFEAGNK +LSFS +D  KFKFE EDKI+PFFET
Sbjct: 1   MASIYSCKECNTNFNLHTNYLFPPDFYFEAGNKGTLSFSAVDSSKFKFEKEDKIKPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPR 110
           L+YWGIQRKRTK+MC NCGK++GYVYDDGPP+ ++PGQFHFGPSQVIPR
Sbjct: 61  LDYWGIQRKRTKMMCMNCGKVVGYVYDDGPPMTESPGQFHFGPSQVIPR 109

[Close]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Match: G7JYR4_MEDTR (Methionine-S-oxide reductase OS=Medicago truncatula GN=MTR_5g022990 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.000e-47
Identity = 86/111 (77.48%), Postives = 96/111 (86.49%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IY+C EC TNLNL T+  +PP+FYFEAGNKNS+SFS ID  KFKFE EDKIRPFFET
Sbjct: 1   MASIYTCSECNTNLNLNTSYTYPPDFYFEAGNKNSISFSTIDATKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNP 112
           +NYWGIQRKRTKI C NC  L+GYVYDDGPPL++TPGQFH GPSQVIPR P
Sbjct: 61  INYWGIQRKRTKIKCNNCNHLVGYVYDDGPPLINTPGQFHMGPSQVIPRAP 111

[Close]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L4W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002520 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.600e-46
Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = 1


		  
Query: 1   MATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFET 60
           MA+IYSC EC TNLNL +  +FPP+FYFEAGNK +LSFS+ID  KF+ E EDK+RPFFET
Sbjct: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 61  LNYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNP 112
           LNYWGIQRKRTK+ C +CG L+GYVYDDGPPL D+PGQFHFGPSQVIPR P
Sbjct: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAP 111

[Close]

BLAST of Spo24269.1 vs. TAIR (Arabidopsis)
Match: AT2G17705.1 (unknown protein)

HSP 1 Score: 174.1 bits (440), Expect = 6.200e-44
Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 1


		  
Query: 2   ATIYSCKECTTNLNLTTNRIFPPNFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFETL 61
           +TIY+CKEC ++LNL  N +FPP+FYFEAGNK +LSF+ +D +KF+FE EDKI PFFETL
Sbjct: 3   STIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETL 62

Query: 62  NYWGIQRKRTKIMCKNCGKLLGYVYDDGPPLVDTPGQFHFGPSQVIPRNP 112
           NYWGIQRKRTKI C +C  L+GY+YDDGPPL    GQ+ FGPSQVIPR P
Sbjct: 63  NYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAP 112

[Close]

BLAST of Spo24269.1 vs. TAIR (Arabidopsis)
Match: AT4G08330.1 (unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.000e-6
Identity = 30/90 (33.33%), Postives = 45/90 (50.00%), Query Frame = 1


		  
Query: 5   YSCKECTTNLNLT-TNRIFPP--NFYFEAGNKNSLSFSWIDPDKFKFENEDKIRPFFETL 64
           YSC  C   LNL+ TNRI     + Y ++     +SF  ID  +F   +E +  P F   
Sbjct: 38  YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 97

Query: 65  NYWGIQRKRTKIMCKNCGKLLGYVYDDGPP 92
           + WG+ R RTK++C+ C   +G    +  P
Sbjct: 98  S-WGLFRHRTKLLCRKCNNYIGNASQEKAP 126

The following BLAST results are available for this feature:

BLAST of Spo24269.1 vs. NCBI nr
BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
BLAST of Spo24269.1 vs. ExPASy Swiss-Prot
BLAST of Spo24269.1 vs. TAIR (Arabidopsis)

BLAST of Spo24269.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|970011963\|ref\|XP_015066912.1\|	3.9e-48	79.8	PREDICTED: uncharacterized pro...	[more]
gi\|565347544\|ref\|XP_006340785.1\|	6.7e-48	79.8	PREDICTED: peptide methionine ...	[more]
gi\|698576920\|ref\|XP_009776335.1\|	1.5e-47	74.1	PREDICTED: uncharacterized pro...	[more]
gi\|460373438\|ref\|XP_004232526.1\|	2.6e-47	77.9	PREDICTED: uncharacterized pro...	[more]
gi\|357483933\|ref\|XP_003612253.1\|	5.7e-47	77.4	methionine-S-oxide reductase [...	[more]

BLAST of Spo24269.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0V0HFS1_SOLCH	2.7e-48	79.8	Uncharacterized protein OS=Sol...	[more]
M0ZW88_SOLTU	4.7e-48	79.8	Uncharacterized protein OS=Sol...	[more]
K4BAK4_SOLLC	1.8e-47	77.9	Uncharacterized protein OS=Sol...	[more]
G7JYR4_MEDTR	4.0e-47	77.4	Methionine-S-oxide reductase O...	[more]
A0A0A0L4W0_CUCSA	2.6e-46	75.6	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo24269.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24269.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G17705.1	6.2e-44	69.0	unknown protein	[more]
AT4G08330.1	3.0e-6	33.3	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002579	Peptide methionine sulphoxide reductase MrsB	GENE3D	2.170.150.20		coord: 3..91 score: 9.
IPR011057	Mss4-like	unknown	SSF51316	Mss4-like	coord: 60..91 score: 2.7
None	No IPR available	PANTHER	PTHR33674	FAMILY NOT NAMED	coord: 1..111 score: 2.5
None	No IPR available	PANTHER	PTHR33674:SF5	SUBFAMILY NOT NAMED	coord: 1..111 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0008152	metabolic process
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0009555	pollen development
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0030091	protein repair
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009987	cellular process
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0048767	root hair elongation
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009790	embryo development
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0061025	membrane fusion
biological_process	GO:0015031	protein transport
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0006768	biotin metabolic process
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004077	biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0033743	peptide-methionine (R)-S-oxide reductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22998	0.77	Barchart \| Table
Spo15499	0.74	Barchart \| Table
Spo13783	0.73	Barchart \| Table
Spo13583	0.72	Barchart \| Table
Spo01514	0.72	Barchart \| Table
Spo00667	0.72	Barchart \| Table
Spo23249	0.71	Barchart \| Table
Spo10864	0.71	Barchart \| Table
Spo17612	0.71	Barchart \| Table
Spo14232	0.71	Barchart \| Table
Spo03903	0.70	Barchart \| Table
Spo11524	0.70	Barchart \| Table
Spo21833	0.70	Barchart \| Table
Spo18997	0.70	Barchart \| Table
Spo02947	0.70	Barchart \| Table
Spo23382	0.70	Barchart \| Table
Spo05816	0.69	Barchart \| Table
Spo09769	0.69	Barchart \| Table
Spo28189	0.68	Barchart \| Table
Spo00748	0.68	Barchart \| Table
Spo02454	0.68	Barchart \| Table
Spo07557	0.68	Barchart \| Table
Spo10360	0.68	Barchart \| Table
Spo13210	0.68	Barchart \| Table
Spo13760	0.68	Barchart \| Table
Spo19123	0.68	Barchart \| Table
Spo25787	0.68	Barchart \| Table
Spo00205	0.68	Barchart \| Table
Spo20174	0.67	Barchart \| Table
Spo06335	0.67	Barchart \| Table
Spo18778	0.67	Barchart \| Table
Spo02486	0.67	Barchart \| Table
Spo09434	0.67	Barchart \| Table
Spo26899	0.67	Barchart \| Table
Spo23238	0.67	Barchart \| Table
Spo10171	0.67	Barchart \| Table
Spo13499	0.67	Barchart \| Table
Spo21159	0.67	Barchart \| Table
Spo19938	0.66	Barchart \| Table
Spo07236	0.66	Barchart \| Table
Spo06919	0.66	Barchart \| Table
Spo15390	0.66	Barchart \| Table
Spo06885	0.66	Barchart \| Table
Spo26013	0.66	Barchart \| Table
Spo00283	0.66	Barchart \| Table
Spo00214	0.66	Barchart \| Table
Spo10835	0.66	Barchart \| Table
Spo09499	0.66	Barchart \| Table
Spo22451	0.65	Barchart \| Table
Spo00943	0.65	Barchart \| Table
Spo14667	0.65	Barchart \| Table
Spo25817	0.65	Barchart \| Table
Spo11509	0.65	Barchart \| Table
Spo25307	0.65	Barchart \| Table
Spo12145	0.65	Barchart \| Table
Spo17338	0.65	Barchart \| Table
Spo21158	0.65	Barchart \| Table
Spo17333	0.65	Barchart \| Table
Spo01792	0.65	Barchart \| Table