Spo24276 (gene)

Overview
NameSpo24276
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionZinc finger family protein
LocationSpoScf_02517 : 28142 .. 30553 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCTCTCTTACACTCCCTCTATTCAACTGAGCTGCCTCAAATCTTTTCGAGAATCGAGGCATTTCTGCATGTTATAAAAACCATGCTTACCCATTCACAAACACCAACCCATCCGTTTTCCTCTCTTTTAAACCCTAATTTTGCGTTCTCTTTCCCAAACGCACAACTTCTTCTTCTACCATATCTTCAAGGTAATCTTTCTCCTCTTTTTTTCTTATAATTTCCCTCCATTTTTTTTCTTAATTAATTGAAGTTATGTACTACATAAACTATAGAGGATGCAAGAAATATAACATTTTTTGTGCACTTTTTTATTATTTTATATTTAAAGGGGGAAAATAATGCAAGTTGGTTGTTTTATTGCTCCTAAATTTGTCATTTTCTAAAAATTTAATGAAATGTATTATCCTTAAAACAAGGGGTTCTGGTCATTATATTATATTACAATAATTCTTCCATGGCGTGGTCTCTTTTAAGAGTGATAAGAGTGGATCTTACATAGTTTTCCACTAGAATTTATTTAGCAAAATTTAAAACACAAAAGAAAAAGCAAAAGGAAAAGAAAAAGAAAAAACAATGGGCAAATATCTTTTGTACGATTACCGTTTTGGTTTGCTTGTCTTGTCTTAGCATTTCCTAACATTTTCCACTATCAATAACAATTAAATAACAAACACACCTAATAAATTTCTAGTCATTACGGAGTATTTAAAATCGAAACTTGTTTATGTCATTGTCTGTTTACTGTTTATTAGTTTATGGTGTTACTTAAAAGAGATTTTGACTAAATATATTGATTTGTTTATTTGTTGTATAGGGAAAGTGTAGGAGAAACAAAATGAACAGGCCAGGTGATTGGAACTGTAGGTCATGCAGCCACTTGAACTTCCAGAGGAGGGACTCGTGCCAGCGCTGTGGGGACCAACGTCCTGATGGCCGAGGAAGCGGTGGCGGCAACGGTGACTTCGGAAGCTTTGGAGGGAGGTCAGGTGGGCCCTCCTTTGCTGGGGGATTTGCGGGTCCTGATGTTAGGCCTGGTGATTGGTATTGTAGCATTGGCAACTGTGGGGCCCACAACTTTGCTAGTAGGTCTAGCTGCTTCAAGTGTGGAGCTTACAAGGAGGAAGCTGCCTCCGCTGATATGGGCCGCTCACGTGGATTCTCCTTCGGTACCGGACTTGGCGGTGCCGGACTTGCCGTTGGTGGTCTTGGCGGTGGTGTACCTGGTGCTAGCGGCCGCTCTGGCTGGAAATCCGGTGACTGGATTTGCACTAGGTAACTATTCTCCTACTATTTTATACAAACATTTTTACCTTTTTATTTTAATGGAAAAGAATTATACTTGTGTACAGTGTACATTATACGTATACCACTACATTTTTGTATTATGTTGTCTACATTTTCTATAGATAAAGAAAAATTACATTTTGGAACTGATACATGTAAGAAAGGTGAACCTTGCGAAAAGTTGCTAGCTATTTTACTGGTCGATGTATGAGTTACATTAGAATTATGCATTATAATCATAATAACATTATCATGGTACGGAGTACATACATTATCAAAACATACTCTGCATTGTACAATACTATGAGAATTGCATGCTAATTCATTAATTATTATATCCGGCCAAGAAATGGTAAACCATGCTAAACAAAAACGTTACGTTGTTATTAATTACTACGTAGGTCGGGTTGCAACGAGCACAACTTCGCTAGCAGGACCGAGTGCTTCAGATGCAGGGAACCAAGGGACTCTGGAAGTAACTCTGCATACTAAACGCACCATTTCACGGTATGTCCTCAATTAGCGTCAAATTAAGTTACTCCGGCCCTTCGTCCGAAAATAATGTTTTCTAATCGACACGTGTACTCATAACCTAACTTCTTTTTTTGTTTTGGTTTGGCGTACAGTTAATGCATGCTACGGAAGTACGTGCGAGGACGAAGCTAAACGAAGAATATCAAGTTACTACATAAGAGGGCCGAAATTAATCTACTTCGAAATTTTAAATTTCCCTCTAAATTTTCCCTATTTAAATTTCATTTTTAGGTTAAAAATCAAGATAATTCATGCTAAAATTAGAAGTTTTTGACTTGATGAGCTTAATTATTAGTTTTGTTACATTTTGACGAGTTTAGTATGATAATCTATTTAGTTAGCTAGTTATTTTGATGGTCTAAGCTCATCTCACTTAAATTTGTCCCTTTTATTTATCTTTTCCCTTTTTCCGATTTTTATTTTATTTTTGTTTTTAATTCGGCGAGAGAGCCAATCTCCCAACCATTATCTCTTTATGTAGTAGTTGATGTTCTACGATGCAATGAAAGTTGGAATATTTTTAGTAATATTTGGTTATCATATTTCTTTTAATAATTTTGGTAATATTAAGTTAGCATCAACTCGAAAG

mRNA sequence

TTCTCTCTCTTACACTCCCTCTATTCAACTGAGCTGCCTCAAATCTTTTCGAGAATCGAGGCATTTCTGCATGTTATAAAAACCATGCTTACCCATTCACAAACACCAACCCATCCGTTTTCCTCTCTTTTAAACCCTAATTTTGCGTTCTCTTTCCCAAACGCACAACTTCTTCTTCTACCATATCTTCAAGGGAAAGTGTAGGAGAAACAAAATGAACAGGCCAGGTGATTGGAACTGTAGGTCATGCAGCCACTTGAACTTCCAGAGGAGGGACTCGTGCCAGCGCTGTGGGGACCAACGTCCTGATGGCCGAGGAAGCGGTGGCGGCAACGGTGACTTCGGAAGCTTTGGAGGGAGGTCAGGTGGGCCCTCCTTTGCTGGGGGATTTGCGGGTCCTGATGTTAGGCCTGGTGATTGGTATTGTAGCATTGGCAACTGTGGGGCCCACAACTTTGCTAGTAGGTCTAGCTGCTTCAAGTGTGGAGCTTACAAGGAGGAAGCTGCCTCCGCTGATATGGGCCGCTCACGTGGATTCTCCTTCGGTACCGGACTTGGCGGTGCCGGACTTGCCGTTGGTGGTCTTGGCGGTGGTGTACCTGGTGCTAGCGGCCGCTCTGGCTGGAAATCCGGTGACTGGATTTGCACTAGGTCGGGTTGCAACGAGCACAACTTCGCTAGCAGGACCGAGTGCTTCAGATGCAGGGAACCAAGGGACTCTGGAAGTAACTCTGCATACTAAACGCACCATTTCACGTTAATGCATGCTACGGAAGTACGTGCGAGGACGAAGCTAAACGAAGAATATCAAGTTACTACATAAGAGGGCCGAAATTAATCTACTTCGAAATTTTAAATTTCCCTCTAAATTTTCCCTATTTAAATTTCATTTTTAGGTTAAAAATCAAGATAATTCATGCTAAAATTAGAAGTTTTTGACTTGATGAGCTTAATTATTAGTTTTGTTACATTTTGACGAGTTTAGTATGATAATCTATTTAGTTAGCTAGTTATTTTGATGGTCTAAGCTCATCTCACTTAAATTTGTCCCTTTTATTTATCTTTTCCCTTTTTCCGATTTTTATTTTATTTTTGTTTTTAATTCGGCGAGAGAGCCAATCTCCCAACCATTATCTCTTTATGTAGTAGTTGATGTTCTACGATGCAATGAAAGTTGGAATATTTTTAGTAATATTTGGTTATCATATTTCTTTTAATAATTTTGGTAATATTAAGTTAGCATCAACTCGAAAG

Coding sequence (CDS)

ATGAACAGGCCAGGTGATTGGAACTGTAGGTCATGCAGCCACTTGAACTTCCAGAGGAGGGACTCGTGCCAGCGCTGTGGGGACCAACGTCCTGATGGCCGAGGAAGCGGTGGCGGCAACGGTGACTTCGGAAGCTTTGGAGGGAGGTCAGGTGGGCCCTCCTTTGCTGGGGGATTTGCGGGTCCTGATGTTAGGCCTGGTGATTGGTATTGTAGCATTGGCAACTGTGGGGCCCACAACTTTGCTAGTAGGTCTAGCTGCTTCAAGTGTGGAGCTTACAAGGAGGAAGCTGCCTCCGCTGATATGGGCCGCTCACGTGGATTCTCCTTCGGTACCGGACTTGGCGGTGCCGGACTTGCCGTTGGTGGTCTTGGCGGTGGTGTACCTGGTGCTAGCGGCCGCTCTGGCTGGAAATCCGGTGACTGGATTTGCACTAGGTCGGGTTGCAACGAGCACAACTTCGCTAGCAGGACCGAGTGCTTCAGATGCAGGGAACCAAGGGACTCTGGAAGTAACTCTGCATACTAA

Protein sequence

MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFAGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24276.1Spo24276.1mRNA


Homology
[Close]
BLAST of Spo24276.1 vs. NCBI nr
Match: gi|902224901|gb|KNA19916.1| (hypothetical protein SOVF_057220 [Spinacia oleracea])

HSP 1 Score: 361.3 bits (926), Expect = 9.500e-97
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA
Sbjct: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA 120
           GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA
Sbjct: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA 120

Query: 121 VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
           VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY
Sbjct: 121 VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 175
[Close]
BLAST of Spo24276.1 vs. NCBI nr
Match: gi|731320168|ref|XP_010670662.1| (PREDICTED: TATA-binding protein-associated factor 2N [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 289.3 bits (739), Expect = 4.600e-75
Identity = 148/178 (83.15%), Postives = 152/178 (85.39%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGS-FGGRSGGPSFAGGF 60
           M+RPGDWNCRSCSHLNFQRRDSCQRCGD RPDGRG GGG GDFGS FGGRSGG  F GGF
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDIRPDGRGGGGGGGDFGSSFGGRSGGSPFGGGF 60

Query: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASAD-MGRSRGFSFGTGLGGAG 120
           AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEA   D MGRSRG          G
Sbjct: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAGCGDSMGRSRG----------G 120

Query: 121 LAVGGLGGGVPG-ASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
            + GG+GGG  G A+GRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY
Sbjct: 121 FSFGGIGGGGSGAATGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 168
[Close]
BLAST of Spo24276.1 vs. NCBI nr
Match: gi|89953389|gb|ABD83289.1| (GlimmerM protein 152 [Beta vulgaris])

HSP 1 Score: 280.8 bits (717), Expect = 1.600e-72
Identity = 143/174 (82.18%), Postives = 148/174 (85.06%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGS-FGGRSGGPSFAGGF 60
           M+RPGDWNCRSCSHLNFQRRDSCQRCGD RPDGRG GGG GDFGS FGGRSGG  F GGF
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDVRPDGRGGGGGGGDFGSSFGGRSGGSPFGGGF 60

Query: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASAD-MGRSRGFSFGTGLGGAG 120
           AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEA   D MGRSRG          G
Sbjct: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAGCGDSMGRSRG----------G 120

Query: 121 LAVGGLGGGVPG-ASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGS 172
            + GG+GGG  G A+GRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSG+
Sbjct: 121 FSFGGIGGGGSGAATGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGN 164
[Close]
BLAST of Spo24276.1 vs. NCBI nr
Match: gi|225442855|ref|XP_002285376.1| (PREDICTED: TATA-binding protein-associated factor 2N [Vitis vinifera])

HSP 1 Score: 226.9 bits (577), Expect = 2.800e-56
Identity = 116/178 (65.17%), Postives = 129/178 (72.47%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           M+RPGDWNCRSC H+NFQRRDSCQRCGD +        G GDFGSFGGR GG SF  GF 
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPK-------SGGGDFGSFGGR-GGSSF--GFT 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAAS---ADMGRSRGFSFGTGLGGA 120
           G DVRPGDWYC+ GNCGAHNFASRS+CFKCGA+K+E+A    +DM RSRGF FG      
Sbjct: 61  GSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDMSRSRGFGFG------ 120

Query: 121 GLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
                       G SGRSGWKSGDWIC+RSGCNEHNFASR ECFRC  PRD  + ++Y
Sbjct: 121 ------------GGSGRSGWKSGDWICSRSGCNEHNFASRMECFRCNAPRDLSNKTSY 150
[Close]
BLAST of Spo24276.1 vs. NCBI nr
Match: gi|590579604|ref|XP_007013833.1| (Ran BP2/NZF zinc finger-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 226.5 bits (576), Expect = 3.700e-56
Identity = 116/178 (65.17%), Postives = 130/178 (73.03%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           M+RPGDWNCRSC +LNFQRRDSCQRCG+ RP      G  GD+GSFG R GG SF  GF 
Sbjct: 1   MSRPGDWNCRSCQYLNFQRRDSCQRCGEPRP------GERGDYGSFGSR-GGSSF--GFT 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAA---SADMGRSRGFSFGTGLGGA 120
           GPDVRPGDWYC++GNCGAHNFASRSSCFKCGA K+E++     DM R RG+ FG+     
Sbjct: 61  GPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAAKDESSGGFEGDMPRMRGYGFGS----- 120

Query: 121 GLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
                       G+S RS WKSGDWICTRSGCNEHNFASR ECFRC  PRDSG+ S+Y
Sbjct: 121 ------------GSSSRSSWKSGDWICTRSGCNEHNFASRMECFRCNAPRDSGNKSSY 152
[Close]
BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK71_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_057220 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 6.600e-97
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA
Sbjct: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA 120
           GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA
Sbjct: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA 120

Query: 121 VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
           VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY
Sbjct: 121 VGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 175
[Close]
BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT96_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042990 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.200e-75
Identity = 148/178 (83.15%), Postives = 152/178 (85.39%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGS-FGGRSGGPSFAGGF 60
           M+RPGDWNCRSCSHLNFQRRDSCQRCGD RPDGRG GGG GDFGS FGGRSGG  F GGF
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDIRPDGRGGGGGGGDFGSSFGGRSGGSPFGGGF 60

Query: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASAD-MGRSRGFSFGTGLGGAG 120
           AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEA   D MGRSRG          G
Sbjct: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAGCGDSMGRSRG----------G 120

Query: 121 LAVGGLGGGVPG-ASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
            + GG+GGG  G A+GRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY
Sbjct: 121 FSFGGIGGGGSGAATGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 168
[Close]
BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Match: Q20CD6_BETVU (GlimmerM protein 152 OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.100e-72
Identity = 143/174 (82.18%), Postives = 148/174 (85.06%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGS-FGGRSGGPSFAGGF 60
           M+RPGDWNCRSCSHLNFQRRDSCQRCGD RPDGRG GGG GDFGS FGGRSGG  F GGF
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDVRPDGRGGGGGGGDFGSSFGGRSGGSPFGGGF 60

Query: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASAD-MGRSRGFSFGTGLGGAG 120
           AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEA   D MGRSRG          G
Sbjct: 61  AGPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAGCGDSMGRSRG----------G 120

Query: 121 LAVGGLGGGVPG-ASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGS 172
            + GG+GGG  G A+GRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSG+
Sbjct: 121 FSFGGIGGGGSGAATGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGN 164
[Close]
BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Match: F6HX96_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06110 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-56
Identity = 116/178 (65.17%), Postives = 129/178 (72.47%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           M+RPGDWNCRSC H+NFQRRDSCQRCGD +        G GDFGSFGGR GG SF  GF 
Sbjct: 84  MSRPGDWNCRSCQHMNFQRRDSCQRCGDPK-------SGGGDFGSFGGR-GGSSF--GFT 143

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAAS---ADMGRSRGFSFGTGLGGA 120
           G DVRPGDWYC+ GNCGAHNFASRS+CFKCGA+K+E+A    +DM RSRGF FG      
Sbjct: 144 GSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDMSRSRGFGFG------ 203

Query: 121 GLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
                       G SGRSGWKSGDWIC+RSGCNEHNFASR ECFRC  PRD  + ++Y
Sbjct: 204 ------------GGSGRSGWKSGDWICSRSGCNEHNFASRMECFRCNAPRDLSNKTSY 233
[Close]
BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MQE0_GOSAR (Putative RNA-binding C17H9.04c OS=Gossypium arboreum GN=F383_24421 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.500e-56
Identity = 117/178 (65.73%), Postives = 130/178 (73.03%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           M+RPGDWNCRSC HLNFQRRDSCQRCG+ RP   G G   GD+GSFGGR GG SF  GF 
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRP---GGGDRGGDYGSFGGR-GGSSF--GFT 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAA---SADMGRSRGFSFGTGLGGA 120
           GPDVRPGDWYC++GNCGAHNFASRSSCFKCGA K+E++    +D+ R RG+ F T     
Sbjct: 61  GPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAAKDESSGGFESDIPRMRGYGFST----- 120

Query: 121 GLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
                       G+S RS WKSGDWICTRSGCNEHNFASR ECFRC  PRDS   S+Y
Sbjct: 121 ------------GSSSRSNWKSGDWICTRSGCNEHNFASRMECFRCNAPRDSTHKSSY 155
[Close]
BLAST of Spo24276.1 vs. TAIR (Arabidopsis)
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 204.5 bits (519), Expect = 5.200e-53
Identity = 109/183 (59.56%), Postives = 123/183 (67.21%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           M+RPGDWNCRSCSHLNFQRRDSCQRCGD R    G GG   DFG+FGGR+   S  G   
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGL--DFGNFGGRA--MSAFGFTT 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLA 120
           G DVRPGDWYC++GNCG HNFASRS+CFKCG +K+E               TG GG G  
Sbjct: 61  GSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDE---------------TGAGGGGGG 120

Query: 121 VGG--------LGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSN 176
           +GG        +   VPG  GRS WKSGDWICTR GCNEHNFASR ECFRC  PRD  + 
Sbjct: 121 IGGPAMFDADIMRSRVPGNGGRSSWKSGDWICTRIGCNEHNFASRMECFRCNAPRDFSNR 164
[Close]
BLAST of Spo24276.1 vs. TAIR (Arabidopsis)
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 3.300e-47
Identity = 103/178 (57.87%), Postives = 120/178 (67.42%), Query Frame = 1 

		  

Query: 1   MNRPGDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFA 60
           MNRPGDWNCR CSHLNFQRRDSCQRC + RP G  +   +G    FGGR    SF G   
Sbjct: 1   MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSG----FGGRPVSSSF-GFNT 60

Query: 61  GPDVRPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGF---SFGTGLGGA 120
           GPDVRPGDWYC++G+CG HNFA+RSSCFKCGA K+E + +    + GF   + G   G  
Sbjct: 61  GPDVRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLF 120

Query: 121 GLAVGGLGGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSGSNSAY 176
           G      GG   G +GRS WKSGDWIC RSGCNEHNFASR+ECFRC  P++  +   Y
Sbjct: 121 GFGGSSSGG---GGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKELATEPPY 170
[Close]
BLAST of Spo24276.1 vs. TAIR (Arabidopsis)
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 4.200e-26
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 1 

		  

Query: 5   GDWNCRSCSHLNFQRRDSCQRCGDQRPDGRGSGGGNGDFGSFGGRSGGPSFAGGFAGPDV 64
           GDW C +C H NF++R+SCQ+CG               +  FGG          +   +V
Sbjct: 6   GDWLCGACQHANFKKRESCQKCG---------------YPKFGGVDVSTYL---YNRTEV 65

Query: 65  RPGDWYCSIGNCGAHNFASRSSCFKCGAYKEEAASADMGRSRGFSFGTGLGGAGLAVGGL 124
             GDWYC   NCG+HN+ASR+SC++CG  K E      G               +A G  
Sbjct: 66  MAGDWYCGALNCGSHNYASRTSCYRCGMIKVEYTEQYYGAQM------------VAYGND 125

Query: 125 GGGVPGASGRSGWKSGDWICTRSGCNEHNFASRTECFRCREPRDSG 171
           G   P      GWK+GDW+C R GC  HN+ASR ECF+C+  RD G
Sbjct: 126 GAACP-----PGWKTGDWVCPRVGCGVHNYASRAECFKCKTTRDYG 136
The following BLAST results are available for this feature:
BLAST of Spo24276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224901|gb|KNA19916.1|9.5e-97100.hypothetical protein SOVF_0572... [more]
gi|731320168|ref|XP_010670662.1|4.6e-7583.1PREDICTED: TATA-binding protei... [more]
gi|89953389|gb|ABD83289.1|1.6e-7282.1GlimmerM protein 152 [Beta vul... [more]
gi|225442855|ref|XP_002285376.1|2.8e-5665.1PREDICTED: TATA-binding protei... [more]
gi|590579604|ref|XP_007013833.1|3.7e-5665.1Ran BP2/NZF zinc finger-like s... [more]
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BLAST of Spo24276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RK71_SPIOL6.6e-97100.Uncharacterized protein OS=Spi... [more]
A0A0J8CT96_BETVU3.2e-7583.1Uncharacterized protein OS=Bet... [more]
Q20CD6_BETVU1.1e-7282.1GlimmerM protein 152 OS=Beta v... [more]
F6HX96_VITVI2.0e-5665.1Putative uncharacterized prote... [more]
A0A0B0MQE0_GOSAR2.5e-5665.7Putative RNA-binding C17H9.04c... [more]
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BLAST of Spo24276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G15680.15.2e-5359.5Ran BP2/NZF zinc finger-like s... [more]
AT5G25490.13.3e-4757.8Ran BP2/NZF zinc finger-like s... [more]
AT2G26695.14.2e-2638.5Ran BP2/NZF zinc finger-like s... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeGENE3D4.10.1060.10coord: 62..98
score: 6.3E-16coord: 3..33
score: 4.5E-12coord: 133..170
score: 3.3
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 138..163
score: 1.7E-8coord: 65..95
score: 4.9E-6coord: 3..30
score: 8.
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 67..93
score: 4.3E-6coord: 5..29
score: 3.9E-5coord: 140..166
score: 8.
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 7..26
score: -coord: 69..90
score: -coord: 142..163
scor
IPR001876Zinc finger, RanBP2-typePROFILEPS50199ZF_RANBP2_2coord: 138..169
score: 10.455coord: 65..96
score: 9.936coord: 3..32
score: 9
IPR001876Zinc finger, RanBP2-typeunknownSSF90209Ran binding protein zinc finger-likecoord: 62..96
score: 1.65E-11coord: 2..33
score: 3.3E-8coord: 133..170
score: 7.77
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 1..172
score: 3.8
NoneNo IPR availablePANTHERPTHR23111:SF34SUBFAMILY NOT NAMEDcoord: 1..172
score: 3.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034968 histone lysine methylation
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0032776 DNA methylation on cytosine
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009791 post-embryonic development
biological_process GO:0022414 reproductive process
biological_process GO:0048608 reproductive structure development
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0006468 protein phosphorylation
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0000387 spliceosomal snRNP assembly
biological_process GO:0006364 rRNA processing
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0008033 tRNA processing
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006338 chromatin remodeling
biological_process GO:0006334 nucleosome assembly
biological_process GO:0044030 regulation of DNA methylation
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0007049 cell cycle
biological_process GO:0043419 urea catabolic process
biological_process GO:0006260 DNA replication
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006826 iron ion transport
biological_process GO:0008152 metabolic process
biological_process GO:0015706 nitrate transport
biological_process GO:0002238 response to molecule of fungal origin
biological_process GO:0010167 response to nitrate
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0033356 UDP-L-arabinose metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0015976 carbon utilization
biological_process GO:0016310 phosphorylation
biological_process GO:0006412 translation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0010431 seed maturation
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0045489 pectin biosynthetic process
biological_process GO:0009620 response to fungus
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009611 response to wounding
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0009202 deoxyribonucleoside triphosphate biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009186 deoxyribonucleoside diphosphate metabolic process
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0052541 plant-type cell wall cellulose metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006265 DNA topological change
biological_process GO:0009957 epidermal cell fate specification
biological_process GO:0016572 histone phosphorylation
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0009451 RNA modification
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0051225 spindle assembly
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007017 microtubule-based process
biological_process GO:0006396 RNA processing
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0042991 obsolete transcription factor import into nucleus
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0006402 mRNA catabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0000963 mitochondrial RNA processing
biological_process GO:0000957 mitochondrial RNA catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0016458 gene silencing
biological_process GO:0008283 cell proliferation
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006425 glutaminyl-tRNA aminoacylation
biological_process GO:0006424 glutamyl-tRNA aminoacylation
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0009553 embryo sac development
biological_process GO:0006397 mRNA processing
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0009555 pollen development
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0034219 carbohydrate transmembrane transport
biological_process GO:0015749 monosaccharide transmembrane transport
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031347 regulation of defense response
biological_process GO:0009735 response to cytokinin
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0010015 root morphogenesis
biological_process GO:0051258 protein polymerization
biological_process GO:0008361 regulation of cell size
biological_process GO:0050826 response to freezing
biological_process GO:0009933 meristem structural organization
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0009640 photomorphogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0043687 post-translational protein modification
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009909 regulation of flower development
biological_process GO:0010162 seed dormancy process
biological_process GO:0016571 histone methylation
biological_process GO:0007389 pattern specification process
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0032259 methylation
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0048449 floral organ formation
biological_process GO:0034969 histone arginine methylation
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0035246 peptidyl-arginine N-methylation
biological_process GO:0019915 lipid storage
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006102 isocitrate metabolic process
biological_process GO:0006739 NADP metabolic process
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0051049 regulation of transport
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0007155 cell adhesion
biological_process GO:0006833 water transport
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0006566 threonine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006306 DNA methylation
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0045010 actin nucleation
biological_process GO:0010220 positive regulation of vernalization response
biological_process GO:0009845 seed germination
biological_process GO:0010389 regulation of G2/M transition of mitotic cell cycle
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0006370 7-methylguanosine mRNA capping
biological_process GO:0006342 chromatin silencing
biological_process GO:0001510 RNA methylation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0048574 long-day photoperiodism, flowering
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0045292 mRNA cis splicing, via spliceosome
biological_process GO:0051028 mRNA transport
biological_process GO:0031053 primary miRNA processing
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0009790 embryo development
biological_process GO:0006810 transport
biological_process GO:0015031 protein transport
biological_process GO:0006457 protein folding
biological_process GO:0010048 vernalization response
biological_process GO:0042127 regulation of cell proliferation
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006606 protein import into nucleus
biological_process GO:0008356 asymmetric cell division
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006269 DNA replication, synthesis of RNA primer
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0009926 auxin polar transport
biological_process GO:0051604 protein maturation
cellular_component GO:0005874 microtubule
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0042555 MCM complex
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0009507 chloroplast
cellular_component GO:0000502 proteasome complex
cellular_component GO:0016020 membrane
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005657 replication fork
cellular_component GO:0048046 apoplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005634 nucleus
cellular_component GO:0000785 chromatin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0005643 nuclear pore
cellular_component GO:0016459 myosin complex
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0046809 replication compartment
cellular_component GO:0030117 membrane coat
cellular_component GO:0005730 nucleolus
cellular_component GO:0000786 nucleosome
cellular_component GO:0005773 vacuole
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005971 ribonucleoside-diphosphate reductase complex
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009332 glutamate-tRNA ligase complex
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005846 nuclear cap binding complex
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0004793 threonine aldolase activity
molecular_function GO:0008466 glycogenin glucosyltransferase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0017056 structural constituent of nuclear pore
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0016151 nickel cation binding
molecular_function GO:0052691 UDP-arabinopyranose mutase activity
molecular_function GO:0003688 DNA replication origin binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004654 polyribonucleotide nucleotidyltransferase activity
molecular_function GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity
molecular_function GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0035241 protein-arginine omega-N monomethyltransferase activity
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0030955 potassium ion binding
molecular_function GO:0031369 translation initiation factor binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0000339 RNA cap binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003896 DNA primase activity
molecular_function GO:0005488 binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004450 isocitrate dehydrogenase (NADP+) activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004743 pyruvate kinase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0015145 monosaccharide transmembrane transporter activity
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0030337 DNA polymerase processivity factor activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity
molecular_function GO:0008447 L-ascorbate oxidase activity
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004819 glutamine-tRNA ligase activity
molecular_function GO:0004818 glutamate-tRNA ligase activity
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function GO:0016905 myosin heavy chain kinase activity
molecular_function GO:0003746 translation elongation factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo192720.75Barchart | Table
Spo177800.74Barchart | Table
Spo222780.74Barchart | Table
Spo061360.73Barchart | Table
Spo006890.73Barchart | Table
Spo184340.73Barchart | Table
Spo251810.73Barchart | Table
Spo215420.72Barchart | Table
Spo199810.72Barchart | Table
Spo168600.72Barchart | Table
Spo064510.72Barchart | Table
Spo184490.72Barchart | Table
Spo095630.72Barchart | Table
Spo039640.71Barchart | Table
Spo168710.71Barchart | Table
Spo010010.71Barchart | Table
Spo078590.71Barchart | Table
Spo085020.71Barchart | Table
Spo268510.71Barchart | Table
Spo272080.71Barchart | Table
Spo236900.70Barchart | Table
Spo159730.70Barchart | Table
Spo135110.70Barchart | Table
Spo167730.70Barchart | Table
Spo122550.70Barchart | Table
Spo121950.70Barchart | Table
Spo162880.70Barchart | Table
Spo243270.70Barchart | Table
Spo167100.70Barchart | Table
Spo058490.70Barchart | Table
Spo027900.70Barchart | Table
Spo120640.69Barchart | Table
Spo134520.69Barchart | Table
Spo151340.69Barchart | Table
Spo045310.69Barchart | Table
Spo058800.69Barchart | Table
Spo212880.69Barchart | Table
Spo085030.69Barchart | Table
Spo182580.69Barchart | Table
Spo211960.68Barchart | Table
Spo004680.68Barchart | Table
Spo057210.68Barchart | Table
Spo118500.68Barchart | Table
Spo223230.68Barchart | Table
Spo233450.68Barchart | Table
Spo038570.68Barchart | Table
Spo035090.68Barchart | Table
Spo097320.68Barchart | Table
Spo137230.68Barchart | Table
Spo257570.68Barchart | Table
Spo154020.68Barchart | Table
Spo243790.68Barchart | Table
Spo143170.68Barchart | Table
Spo168170.68Barchart | Table
Spo137970.68Barchart | Table
Spo070940.68Barchart | Table
Spo250990.68Barchart | Table
Spo238660.67Barchart | Table
Spo013140.67Barchart | Table
Spo020390.67Barchart | Table
Spo030590.67Barchart | Table
Spo031050.67Barchart | Table
Spo032410.67Barchart | Table
Spo049450.67Barchart | Table
Spo054610.67Barchart | Table
Spo057520.67Barchart | Table
Spo061370.67Barchart | Table
Spo074320.67Barchart | Table
Spo108110.67Barchart | Table
Spo109980.67Barchart | Table
Spo117560.67Barchart | Table
Spo166090.67Barchart | Table
Spo166290.67Barchart | Table
Spo176170.67Barchart | Table
Spo187190.67Barchart | Table
Spo227120.67Barchart | Table
Spo238150.67Barchart | Table
Spo259540.67Barchart | Table
Spo246350.66Barchart | Table
Spo080300.66Barchart | Table
Spo011140.66Barchart | Table
Spo099970.66Barchart | Table
Spo007020.66Barchart | Table
Spo079210.66Barchart | Table
Spo258570.66Barchart | Table
Spo161060.66Barchart | Table
Spo158170.66Barchart | Table
Spo138560.66Barchart | Table
Spo115960.66Barchart | Table
Spo171180.66Barchart | Table
Spo070680.66Barchart | Table
Spo214900.66Barchart | Table
Spo005250.66Barchart | Table
Spo055890.66Barchart | Table
Spo048700.66Barchart | Table
Spo006370.66Barchart | Table
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