Spo24364 (gene) | SpinachBase

Overview


Name	Spo24364
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RING/U-box superfamily protein
Location	SpoScf_00739 : 284169 .. 288570 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCCTTATGGTTACGGAGTACATAATTTCTTGGGGGCATTTGGTCATTTTCTCCCTTGTTACTTGTAAGTACGCACACAAAGAAAAGGTCAAACCGGAGAAAAGCCAAGTCAAAAGAGAGAGAAAGAGAGAAAACATACGGAACCACCGCCGGAAACTCAGGTTATTCACTTCTTCTTCATCTTCTTCACACCCACGTGTCTTCTTATTTCTGCCAAGTCCCCTGATTTCTTTTAATTTTTTTTAATTTCCCTCTCATAAAAACATCTCCTTTCTCTAAACAACTCCCTCCATTTATCTCTCTTGAAGCACAACAACAATGGCAGAAGTGGACCCACCGGAGCAGCCCCGCCATATCCAAACCCGGCGAGCTCAATCATTCACTTCTCTCTCCTCCTTCTTCGCTGGACCTGAAAGCCCAACTCATCCTTCTCTGCCCTCTCTGTCGGACTCTGAACCTGATTCCTGCGATTTAGACCCGAAGCCGGACCCGATTTTCGAACCTGATGTAGACCATCTTCTTCATCATCATCGTTGTCATCATGAGCATGATCATGATCAGGTGAGCTATTCCAACTTGTTCCAGCGTAGTTCTTCTCAAAACGCCTTTATCTCTGATGGTGCAATTGGGCTAGGTTTGGGTTTGGGTTTGGGAACAGGGTTGGGTGACCCGAATTGTGAATTTTCGGGTGAAGGTGAGAGGATTGGTGGATTGAGTGATAAAGATGAGGTTGATTTAGAATTAGGGTTAGGGTTAGGTGCTGATCATGATGCTGGTCTGAATCCTAGTTATGCATCTCCAATGATTGAGGAACCGCAGCATTTTGAGGGTCTGCGTATTGTGAATATTGATGATTCTGACTCTGATTCTGAAGATGGTGATCATCACCATAGAGGGTTCGGTGGGGTTAGTGATTTCGATCGTCCGCCATACTGTTGGGATTATCTGGGGTTTAACAATGGGAATCGTAGTGAAAATGTTGAAACTCAGGAGAGAGAATCTGATGTGGGTAGTGTTGTAAATGATAATTTCGATGCTTTTTTTGTTGAAGAAGAAGGTTTTGTTGTTGTTGAGGATGATGATTTAGGAACACCAATTCAGCTGGATACTGATGTGTCAAATGTGTTCGATACGTATCAATTGAGGGCGGAACAGCAGGAAATTGCTATTGATTCTGATACTGATGAAGGTGGAGAACTTGGTGTGGAGGAAGCAATTCGTGATTTGGAGTGGGAAATCTTGTTAGCTGTTAACAATTTCAATCGTGAGGTTTATGATATGGATTTCAATGTGAATATGTATGAAGCGATTCTTGGTGAGGTGGAGGAGCATATGAATGACTGGAGGGGGAGTCCTCCTGCTGCTGACTCTGTTATTGTGAACCTTCCTAGTGTTACATTGTCTTGTGAGGTTTTGAAAGTGAGTGAAGTCGTTTGTGCAATATGTAAGGACGAAGTTTCTGAGGAGGAAGTGGTAAAGCAGCTTCCTTGCTTTCATTACTACCACGGGGAATGTATAGTTCCATGGTTGAGAATTCGAAATACTTGTCCTGTTTGTCGGCATGAGCTGCCCACTGATGATGCTGAATATGAGTTCAGGAAGAGGGAGAGGGAGATGGAAGAAGGGCTGAATGTTGATGCTAATGAGGACTTGTCTCCGGATTCACAGGTTAGGCTTGATTTCCATGTCTTTCTTTGAATGTCATGTAAGATGTTGATAAATGTGGGCTTCTCAATTAGTGTCAAATGCCTCCATTATTTATTGGAGCCATTTAATGTCGTATAGTTGATGCAAAACAGAACAAAATTAGCTGGATCATTTTAGTACAAATTCAAGCAACTGTAATTTTAAATCAGAAATCTAAATTGTACAGTATAAATGTTGTAAGTTATGGCACAAGTAATTAGAATTGTGTGTCGTTGTTGGTGTCTTTTTTTATACCCTCTATTGTTTGCTATTATCATATGGCCATGTATATGTTGTAAATGTAGAACAAACAAAAAATTAAGTGGTGGTGTTGATGTTTTTTGTTGGCATTCTGTGATTGCTCATGTGATAGGGCCAAGAAGTATGTTATTATTGGTATCCTTTTGGGAGCAAATTGGTGTTGCTCAATGCTCTGTCCTTTGATTTGAACTTCGAAGGAGTAAGTAGTTGCTCACTTAACCTAAGTGGAGGCTAAGTTGGTGAGATATGAAGTTGAAATAACGCAAATGCTCAACTCTGTTGAAAAATGGTCATGTTTTTGAATCCTAACTAATATAGAGTACCAAATAACCTGCTTTCCAAGGCATTCAAAACTTGGTAGGTACTTGTTTGGATGAATATGTGGGGGTTTGATTGGGTTTTCTTAAACTTTGAACTTCGAATTTCCTGAGTTAAATAGGTGCCGTGGAACATCGGGTTGCTGAGGGCCAAACCAACTTGCATCCTCTAAAATGCTTCAAGAGTATGTGCATTGAAGTTCTGTTTTTAGATGGAAATGGAGTATAGAGATTACTTTTGTTAGTGATGCCGGATTTAGGAGAATCTTAGAGTGACCAATCTGGACTAACAACTTGTTGTCTCATAACTTTTTGATTAAGATTTTTATATTTTGTTTGGAATTATTGTGTTGCCAACTGGGCTAAGCAAAAATGTGGATACGGATTGGACATCAAAATTTTGATTTTGGGATATCTGATACCCAATGTATTTCGAATAATAGATATTCAATCCGTATCCAAAGTTTGGGGAAATATAATACAAAAATTTATTAAAATTTTTTAATCTTGATAAAAAGTTGTATCAAGATTTAGTAGTTTTGTGTCATTATATATTATCTATGTTACCCGGACTCGGATATCTATATTGGACACCGGTACGTGTCCAAGTGTCCGACACGACTATTTTGTGAAAAGATTGTACGACTTTGGTCCAAAATGAGGTGTCGAAGTTTACATACCCATGTCCGGTATTTGAGGTAAAAGGAAGAGTCTGGGTAACAAAGTATATTATTGTTGATATGTTTTTTAACAAAAATGTGAGAAGTTGGATATCCGTTATATATGACTTGTATCGGATCTGAAAACTTTCTGAAATCTGACTGGTGATCAGCCTTGGTAACACCATAGCTTGCGGAGTGAACACAATTACTTTCTGAAATTGCCCTGAAATCATACTTCATGAAAGTTGAATTGGAATGTCAAAGTGAGGTTCTGAAATCTGAATCATGGAAGTTGAATTGAAATGTAAAAGTGAGATTCTGAAATAGTGAAATCTGAATCATGGAAGTTGGATGCAGTAGAGGCATGGAGCTGTAGTTGTTAAAGTTTGAACCTTGGTTATATAGTTATAAATAAATTAGAATATAATGATTATCTTTGTGGTCCTTAAGAGATGAGTTTATTGAACAAAATGGTTATTGAGGAAAACATAGGTAATGTGTATAGCGCGAGTTATCAGAGGAAACAGTTGATGTCTTGTGGACCAGAGGAAACAGAACATATGCGCTTGAGATGTTTTATGATCAGAGGCAGGTTATGTTAAGTCAAACTCGAGGCCATAAGGTATACTAGTATGGTGTGGTTCCTAGATTTGGGTCTTGCTGTTATTCTGCTCTATTTCTGAATTGTTCTAGTGTAATATCAGGTAAAGATTGTAACCCCAGCAGCTGGTCCATTTTCAAGATCAGTATTGCTGCCTGACTGCCTGCCATTCTTGTTAGCTAACAGATTTTTAAACCTGGTATATTGGAAGATGTTGTTTTGTAGAATTTTGGGGGCTTGGGTCCAACTGTGGATGAAAAATCTGGATCTACTCTTCACATAGATGCTATGCATCAGATTAAGATGGCCCCAAAAAATCGGGATGTTGTTTATGTAATCGGTGTGATTTACGTCTGTGATAACACGTTTTATAGAGCAGCTATGGTGTAGTTGATAAACTTGGTAGCTTACTGCCTTACCATGAGAAACGCCCTTGAGATGAATACTGCATTCTGCTGTTAAAATTCTTTGATCAGGAACAACACCCGACAGGGGAAGAAAAATGAAAGGTGCTGTGTATCTCATGCTGTTAACAACACCCGACAGGGGAAGAAAAATGAAAGGTGCTGTGTATCTCTGTGTGTGTTTTTTGAAAAAATAAAATGGCCTAATGGAGTTTGATCCTTATTTAGCTCAAGGAATAAGTGGAGAAGAATGCAAGGTAATCAAGTTTGACACAATCTTATTTGATTTATCTCCTTCCAAATCTGGTAAAGAGTGAAAAATAGAGCTGTGGAATATGGACAATGTTGCACAATAAGCATGGTGCACAAGAAGAACATACGTGTACCAACAAAAGAACATGACCTTGCGACAAAAGAAATGTCATATATTATTTCAATTTTTTGTTATGAAAAATATATAGTATTTTAC

mRNA sequence

ATACCCTTATGGTTACGGAGTACATAATTTCTTGGGGGCATTTGGTCATTTTCTCCCTTGTTACTTGTAAGTACGCACACAAAGAAAAGGTCAAACCGGAGAAAAGCCAAGTCAAAAGAGAGAGAAAGAGAGAAAACATACGGAACCACCGCCGGAAACTCAGCACAACAACAATGGCAGAAGTGGACCCACCGGAGCAGCCCCGCCATATCCAAACCCGGCGAGCTCAATCATTCACTTCTCTCTCCTCCTTCTTCGCTGGACCTGAAAGCCCAACTCATCCTTCTCTGCCCTCTCTGTCGGACTCTGAACCTGATTCCTGCGATTTAGACCCGAAGCCGGACCCGATTTTCGAACCTGATGTAGACCATCTTCTTCATCATCATCGTTGTCATCATGAGCATGATCATGATCAGGTGAGCTATTCCAACTTGTTCCAGCGTAGTTCTTCTCAAAACGCCTTTATCTCTGATGGTGCAATTGGGCTAGGTTTGGGTTTGGGTTTGGGAACAGGGTTGGGTGACCCGAATTGTGAATTTTCGGGTGAAGGTGAGAGGATTGGTGGATTGAGTGATAAAGATGAGGTTGATTTAGAATTAGGGTTAGGGTTAGGTGCTGATCATGATGCTGGTCTGAATCCTAGTTATGCATCTCCAATGATTGAGGAACCGCAGCATTTTGAGGGTCTGCGTATTGTGAATATTGATGATTCTGACTCTGATTCTGAAGATGGTGATCATCACCATAGAGGGTTCGGTGGGGTTAGTGATTTCGATCGTCCGCCATACTGTTGGGATTATCTGGGGTTTAACAATGGGAATCGTAGTGAAAATGTTGAAACTCAGGAGAGAGAATCTGATGTGGGTAGTGTTGTAAATGATAATTTCGATGCTTTTTTTGTTGAAGAAGAAGGTTTTGTTGTTGTTGAGGATGATGATTTAGGAACACCAATTCAGCTGGATACTGATGTGTCAAATGTGTTCGATACGTATCAATTGAGGGCGGAACAGCAGGAAATTGCTATTGATTCTGATACTGATGAAGGTGGAGAACTTGGTGTGGAGGAAGCAATTCGTGATTTGGAGTGGGAAATCTTGTTAGCTGTTAACAATTTCAATCGTGAGGTTTATGATATGGATTTCAATGTGAATATGTATGAAGCGATTCTTGGTGAGGTGGAGGAGCATATGAATGACTGGAGGGGGAGTCCTCCTGCTGCTGACTCTGTTATTGTGAACCTTCCTAGTGTTACATTGTCTTGTGAGGTTTTGAAAGTGAGTGAAGTCGTTTGTGCAATATGTAAGGACGAAGTTTCTGAGGAGGAAGTGGTAAAGCAGCTTCCTTGCTTTCATTACTACCACGGGGAATGTATAGTTCCATGGTTGAGAATTCGAAATACTTGTCCTGTTTGTCGGCATGAGCTGCCCACTGATGATGCTGAATATGAGTTCAGGAAGAGGGAGAGGGAGATGGAAGAAGGGCTGAATGTTGATGCTAATGAGGACTTGTCTCCGGATTCACAGGAACAACACCCGACAGGGGAAGAAAAATGAAAGGTGCTGTGTATCTCATGCTGTTAACAACACCCGACAGGGGAAGAAAAATGAAAGGTGCTGTGTATCTCTGTGTGTGTTTTTTGAAAAAATAAAATGGCCTAATGGAGTTTGATCCTTATTTAGCTCAAGGAATAAGTGGAGAAGAATGCAAGGTAATCAAGTTTGACACAATCTTATTTGATTTATCTCCTTCCAAATCTGGTAAAGAGTGAAAAATAGAGCTGTGGAATATGGACAATGTTGCACAATAAGCATGGTGCACAAGAAGAACATACGTGTACCAACAAAAGAACATGACCTTGCGACAAAAGAAATGTCATATATTATTTCAATTTTTTGTTATGAAAAATATATAGTATTTTAC

Coding sequence (CDS)

ATGGTTACGGAGTACATAATTTCTTGGGGGCATTTGGTCATTTTCTCCCTTGTTACTTGTAAGTACGCACACAAAGAAAAGGTCAAACCGGAGAAAAGCCAAGTCAAAAGAGAGAGAAAGAGAGAAAACATACGGAACCACCGCCGGAAACTCAGCACAACAACAATGGCAGAAGTGGACCCACCGGAGCAGCCCCGCCATATCCAAACCCGGCGAGCTCAATCATTCACTTCTCTCTCCTCCTTCTTCGCTGGACCTGAAAGCCCAACTCATCCTTCTCTGCCCTCTCTGTCGGACTCTGAACCTGATTCCTGCGATTTAGACCCGAAGCCGGACCCGATTTTCGAACCTGATGTAGACCATCTTCTTCATCATCATCGTTGTCATCATGAGCATGATCATGATCAGGTGAGCTATTCCAACTTGTTCCAGCGTAGTTCTTCTCAAAACGCCTTTATCTCTGATGGTGCAATTGGGCTAGGTTTGGGTTTGGGTTTGGGAACAGGGTTGGGTGACCCGAATTGTGAATTTTCGGGTGAAGGTGAGAGGATTGGTGGATTGAGTGATAAAGATGAGGTTGATTTAGAATTAGGGTTAGGGTTAGGTGCTGATCATGATGCTGGTCTGAATCCTAGTTATGCATCTCCAATGATTGAGGAACCGCAGCATTTTGAGGGTCTGCGTATTGTGAATATTGATGATTCTGACTCTGATTCTGAAGATGGTGATCATCACCATAGAGGGTTCGGTGGGGTTAGTGATTTCGATCGTCCGCCATACTGTTGGGATTATCTGGGGTTTAACAATGGGAATCGTAGTGAAAATGTTGAAACTCAGGAGAGAGAATCTGATGTGGGTAGTGTTGTAAATGATAATTTCGATGCTTTTTTTGTTGAAGAAGAAGGTTTTGTTGTTGTTGAGGATGATGATTTAGGAACACCAATTCAGCTGGATACTGATGTGTCAAATGTGTTCGATACGTATCAATTGAGGGCGGAACAGCAGGAAATTGCTATTGATTCTGATACTGATGAAGGTGGAGAACTTGGTGTGGAGGAAGCAATTCGTGATTTGGAGTGGGAAATCTTGTTAGCTGTTAACAATTTCAATCGTGAGGTTTATGATATGGATTTCAATGTGAATATGTATGAAGCGATTCTTGGTGAGGTGGAGGAGCATATGAATGACTGGAGGGGGAGTCCTCCTGCTGCTGACTCTGTTATTGTGAACCTTCCTAGTGTTACATTGTCTTGTGAGGTTTTGAAAGTGAGTGAAGTCGTTTGTGCAATATGTAAGGACGAAGTTTCTGAGGAGGAAGTGGTAAAGCAGCTTCCTTGCTTTCATTACTACCACGGGGAATGTATAGTTCCATGGTTGAGAATTCGAAATACTTGTCCTGTTTGTCGGCATGAGCTGCCCACTGATGATGCTGAATATGAGTTCAGGAAGAGGGAGAGGGAGATGGAAGAAGGGCTGAATGTTGATGCTAATGAGGACTTGTCTCCGGATTCACAGGAACAACACCCGACAGGGGAAGAAAAATGA

Protein sequence

MVTEYIISWGHLVIFSLVTCKYAHKEKVKPEKSQVKRERKRENIRNHRRKLSTTTMAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIFEPDVDHLLHHHRCHHEHDHDQVSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPNCEFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDSDSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAIRDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDANEDLSPDSQEQHPTGEEK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24364.1	Spo24364.1	mRNA

Homology

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BLAST of Spo24364.1 vs. NCBI nr
Match: gi|902223645|gb|KNA19524.1| (hypothetical protein SOVF_059630 [Spinacia oleracea])

HSP 1 Score: 842.0 bits (2174), Expect = 5.400e-241
Identity = 426/460 (92.61%), Postives = 429/460 (93.26%), Query Frame = 1


		  
Query: 56  MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF 115
           MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF
Sbjct: 1   MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF 60

Query: 116 EPDVDHLLHHHRCHHEHDHDQVSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPNC 175
           EPD                          RSSSQNAFISDGAIGLGLGLGLGTGLGDPNC
Sbjct: 61  EPD--------------------------RSSSQNAFISDGAIGLGLGLGLGTGLGDPNC 120

Query: 176 EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS 235
           EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS
Sbjct: 121 EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS 180

Query: 236 DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA 295
           DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA
Sbjct: 181 DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA 240

Query: 296 FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI 355
           FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI
Sbjct: 241 FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI 300

Query: 356 RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT 415
           RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT
Sbjct: 301 RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT 360

Query: 416 LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD 475
           LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD
Sbjct: 361 LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD 420

Query: 476 DAEYEFRKREREMEEGLNVDANEDLSPDSQ-EQHPTGEEK 515
           DAEYEFRKREREMEEGLNVDANEDLSPDSQ  +H T + +
Sbjct: 421 DAEYEFRKREREMEEGLNVDANEDLSPDSQLHRHLTDDPR 434

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BLAST of Spo24364.1 vs. NCBI nr
Match: gi|731316176|ref|XP_010694538.1| (PREDICTED: uncharacterized protein LOC104907320 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 640.6 bits (1651), Expect = 2.400e-180
Identity = 346/468 (73.93%), Postives = 377/468 (80.56%), Query Frame = 1


		  
Query: 56  MAEVDPPEQPRHIQTRRAQSFTSLSS-FFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPI 115
           MAEVDPPEQ  H Q RRAQ FTSLSS FFAGPESPTHPSL S SDSEPDSCD+DP  +PI
Sbjct: 1   MAEVDPPEQLHHNQARRAQLFTSLSSMFFAGPESPTHPSLLSASDSEPDSCDVDP--NPI 60

Query: 116 FEPDVDHLLHHHRCHHEHDHDQVSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPN 175
           FEP+ DHL H+H  H+   HDQVS+       SSQNA IS   +GLGLGLGLGTG GDP+
Sbjct: 61  FEPEEDHLHHYH--HNHIQHDQVSFV------SSQNALISGSTLGLGLGLGLGTGSGDPS 120

Query: 176 CEFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNP-SYASPMIEEPQHFEGLRIVNID 235
           C  SGEGE+I GL + +EVDLELGLGLG       N  +Y SPM EE + FEGLR+VNID
Sbjct: 121 CGISGEGEKISGLGN-NEVDLELGLGLGFGSSNRNNVVNYVSPMEEERRVFEGLRVVNID 180

Query: 236 DSDSDSEDG-------------DHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQE 295
           DSDSDS+DG             +  H+GFGGVSDFDRPPYCWDYLGFNNGNRSEN E QE
Sbjct: 181 DSDSDSDDGILQDDDINEVDSEEQQHQGFGGVSDFDRPPYCWDYLGFNNGNRSENSEVQE 240

Query: 296 RESDVGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAID 355
             SD GSVVNDNF+ F+V+ +  V V DDD+GTPIQLDTDVSNVFDTYQLRAEQQEIAID
Sbjct: 241 IVSDAGSVVNDNFEGFYVDVD--VDVVDDDVGTPIQLDTDVSNVFDTYQLRAEQQEIAID 300

Query: 356 SDTDEGGELGVEEAIRDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGS 415
           SDTDEGGE GVE+AIRDLEWEILLAVNNFNREVYDMDFNV+MYEAILGEVE+ MN+WRGS
Sbjct: 301 SDTDEGGEFGVEDAIRDLEWEILLAVNNFNREVYDMDFNVDMYEAILGEVEDRMNEWRGS 360

Query: 416 PPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLR 475
           PPAA SVI NLPSV LS E L  +EVVCAICK+EV  EEVVKQLPC HYYHGECIVPWLR
Sbjct: 361 PPAAGSVIENLPSVQLSHEGLVENEVVCAICKEEVLGEEVVKQLPCLHYYHGECIVPWLR 420

Query: 476 IRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDANEDLSPDSQEQH 509
           +RNTCPVCRHELPTDDAEYE+RKRERE+E GLNVD NEDLS D Q  H
Sbjct: 421 MRNTCPVCRHELPTDDAEYEYRKREREVEVGLNVDPNEDLSQDLQVSH 455

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BLAST of Spo24364.1 vs. NCBI nr
Match: gi|922350663|ref|XP_013451167.1| (zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula])

HSP 1 Score: 173.3 bits (438), Expect = 1.100e-39
Identity = 131/359 (36.49%), Postives = 187/359 (52.09%), Query Frame = 1


		  
Query: 172 DPNCEFSGEGER----IGGLSDKDEVDLELGLGLGAD--HDAGLNPSYASPMIEEPQHFE 231
           DP+C +  E +        ++D  + + ELGLGLG D  ++      Y     ++   F 
Sbjct: 42  DPSCPWDDEEDTRINPFSNIADFHQGEPELGLGLGFDVEYEYENETQYNDDNYDDVFDFS 101

Query: 232 ----------GLRIVNIDDSDSDSEDGDHHHRGFGGVSDFDRPP-YCWDYLGFNNGNRSE 291
                     GLR+V    +DS+S   D     +GG +D +R    CWD L   + +RS 
Sbjct: 102 SLVGGGGDSGGLRVVEFG-TDSESSGNDEEF-DYGGENDDERVSGLCWDSLCLEDDHRSV 161

Query: 292 NVETQERESDVGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQ 351
                + E  +   VN+N     +EE    ++ D+     +++D DV NV    ++  + 
Sbjct: 162 ---LNDWEEVIEGRVNENE----IEEASSSLLIDE-----VEVDVDV-NV--EVEIDEQS 221

Query: 352 QEIAIDSDTDEGGELGVEEAIRDLEWEILLAVNNFNRE----------------VYDMDF 411
            E   + + DE GE    EA+R LEWEILLA NN  R                 V+D   
Sbjct: 222 MESGFEGEEDEAGE----EALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGII 281

Query: 412 NVNM-YEAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSE 471
           + N  Y+ + G++ E+ +  +GSPPAA S + NLP V L+ E LK  +VVCA+CKDEV+ 
Sbjct: 282 SGNTDYDILFGQLLENDSGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTV 341

Query: 472 EEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDA 497
           EE V +LPC H YHG+CI+PWL IRNTCPVCR+ELPTDD +YE  K  R   + L+ DA
Sbjct: 342 EEKVGKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVARDLLDFDA 379

[Close]

BLAST of Spo24364.1 vs. NCBI nr
Match: gi|1012319236|gb|KYP32349.1| (E3 ubiquitin-protein ligase CIP8 [Cajanus cajan])

HSP 1 Score: 171.4 bits (433), Expect = 4.100e-39
Identity = 139/390 (35.64%), Postives = 181/390 (46.41%), Query Frame = 1


		  
Query: 124 HHHRCHHEHDHDQ---VSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPNCEFSGE 183
           H HR HH H H      S ++    S S + F++D                  +C+ +  
Sbjct: 4   HRHRHHHHHHHSSNPFASSTHSDSDSDSVSCFVTDLFESRSRLC---------SCDDTDI 63

Query: 184 GERIGGLSDKDEVDLELGLGLGAD---HDAGLNPSYASPMIEEPQHFEGLRIVNI-DDSD 243
               G + D    D  LGLGLG     H    N       +      +GLR+V    DSD
Sbjct: 64  NPFSGAVCDLHRTDQVLGLGLGFGVEVHAPSQNDDGNRDSVFNFDGSDGLRVVGFGSDSD 123

Query: 244 SDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDAF 303
           S SE+G    R  GG  DFD    CWD L   +                   +N++F+  
Sbjct: 124 SSSEEGGD--RVGGGFDDFD-VRLCWDSLCLEDQR----------------TLNESFEWE 183

Query: 304 FVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAIR 363
            VEE    V E +DLG  +  + ++    D   + +     A + + +E  E   EEA+R
Sbjct: 184 EVEER---VSEREDLGLVVD-EVEIEGGDDGNSVASGFTNAAEEEEEEEEEEDAGEEALR 243

Query: 364 DLEWEILLAVNNFNREV--------------------YDMDFNVNMYEAILGEVEEHMND 423
            LEWEILLAVNN  R V                     D       Y+ + G+  E+ N 
Sbjct: 244 YLEWEILLAVNNSERNVNNAGGLEHEGSVGGADLVTIQDGYVYAAEYDVLFGQFLENENA 303

Query: 424 WRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIV 483
            +GSPPAA SV+ +LP V LS E L+   V CAICKDE+  EE V++LPC H YHG+CI 
Sbjct: 304 LKGSPPAAKSVVESLPLVELSKEELEGKSVACAICKDEILLEEKVRRLPCSHCYHGDCIF 361

Query: 484 PWLRIRNTCPVCRHELPTDDAEYEFRKRER 487
           PWL IRNTCPVCR ELPTDD +YE RK  R
Sbjct: 364 PWLSIRNTCPVCRFELPTDDPDYEQRKVHR 361

[Close]

BLAST of Spo24364.1 vs. NCBI nr
Match: gi|460375210|ref|XP_004233400.1| (PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Solanum lycopersicum])

HSP 1 Score: 166.8 bits (421), Expect = 1.000e-37
Identity = 126/326 (38.65%), Postives = 175/326 (53.68%), Query Frame = 1


		  
Query: 186 GLSDKDEVDLELGLG-LGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDSDSDSEDGDH 245
           G  D + V LE   G  G+D+D  L PS  + +       +G+R+V +  SDSDS++ + 
Sbjct: 110 GFDDGNRVILEDVYGDFGSDYDGVLLPSDTNGV----DTGDGIRVVGVVGSDSDSQEVEL 169

Query: 246 HHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDAFFVEEEGFV 305
           +      V + D+    W  L  ++          +R+      VND F+   V E G  
Sbjct: 170 N------VGEIDQANDFWSCLRIDD----------QRD------VNDEFEWEEVNERG-- 229

Query: 306 VVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSD--TDEGGELG---VEEAIRDLE 365
             ED D          +S+V D  +      EI++ SD  + EGG      V+E +R+LE
Sbjct: 230 --EDRDY---------LSSVIDGIE------EISVSSDISSSEGGNSNSHSVDEPVRNLE 289

Query: 366 WEILLAVNNFNREVYDMDFN------VNM--YEAILGEVEEHMNDWRGSPPAADSVIVNL 425
           WE+LLAVNN  R + ++D N      VN   ++A+ G+  E   + +GSPPAA SVI NL
Sbjct: 290 WEVLLAVNNIERSL-ELDGNDDGIAHVNETDHDALFGQFLESEGNLKGSPPAAKSVIENL 349

Query: 426 PSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHE 485
           P VTL  E  K++   CA+CKDE+   E V +LPC HYYH ECI+PWL IRNTCPVCRHE
Sbjct: 350 PLVTLKDEENKIA---CAVCKDEILVVEKVTELPCSHYYHWECIIPWLNIRNTCPVCRHE 386

Query: 486 LPTDDAEYEFRKREREMEEGLNVDAN 498
           LPTDD +YE RK  R    G  + ++
Sbjct: 410 LPTDDTDYERRKIGRRPGAGAQLSSD 386

[Close]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059630 PE=4 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 3.800e-241
Identity = 426/460 (92.61%), Postives = 429/460 (93.26%), Query Frame = 1


		  
Query: 56  MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF 115
           MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF
Sbjct: 1   MAEVDPPEQPRHIQTRRAQSFTSLSSFFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPIF 60

Query: 116 EPDVDHLLHHHRCHHEHDHDQVSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPNC 175
           EPD                          RSSSQNAFISDGAIGLGLGLGLGTGLGDPNC
Sbjct: 61  EPD--------------------------RSSSQNAFISDGAIGLGLGLGLGTGLGDPNC 120

Query: 176 EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS 235
           EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS
Sbjct: 121 EFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDS 180

Query: 236 DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA 295
           DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA
Sbjct: 181 DSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDA 240

Query: 296 FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI 355
           FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI
Sbjct: 241 FFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAI 300

Query: 356 RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT 415
           RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT
Sbjct: 301 RDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGSPPAADSVIVNLPSVT 360

Query: 416 LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD 475
           LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD
Sbjct: 361 LSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTD 420

Query: 476 DAEYEFRKREREMEEGLNVDANEDLSPDSQ-EQHPTGEEK 515
           DAEYEFRKREREMEEGLNVDANEDLSPDSQ  +H T + +
Sbjct: 421 DAEYEFRKREREMEEGLNVDANEDLSPDSQLHRHLTDDPR 434

[Close]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D3I4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g028550 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 1.700e-180
Identity = 346/468 (73.93%), Postives = 377/468 (80.56%), Query Frame = 1


		  
Query: 56  MAEVDPPEQPRHIQTRRAQSFTSLSS-FFAGPESPTHPSLPSLSDSEPDSCDLDPKPDPI 115
           MAEVDPPEQ  H Q RRAQ FTSLSS FFAGPESPTHPSL S SDSEPDSCD+DP  +PI
Sbjct: 1   MAEVDPPEQLHHNQARRAQLFTSLSSMFFAGPESPTHPSLLSASDSEPDSCDVDP--NPI 60

Query: 116 FEPDVDHLLHHHRCHHEHDHDQVSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPN 175
           FEP+ DHL H+H  H+   HDQVS+       SSQNA IS   +GLGLGLGLGTG GDP+
Sbjct: 61  FEPEEDHLHHYH--HNHIQHDQVSFV------SSQNALISGSTLGLGLGLGLGTGSGDPS 120

Query: 176 CEFSGEGERIGGLSDKDEVDLELGLGLGADHDAGLNP-SYASPMIEEPQHFEGLRIVNID 235
           C  SGEGE+I GL + +EVDLELGLGLG       N  +Y SPM EE + FEGLR+VNID
Sbjct: 121 CGISGEGEKISGLGN-NEVDLELGLGLGFGSSNRNNVVNYVSPMEEERRVFEGLRVVNID 180

Query: 236 DSDSDSEDG-------------DHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQE 295
           DSDSDS+DG             +  H+GFGGVSDFDRPPYCWDYLGFNNGNRSEN E QE
Sbjct: 181 DSDSDSDDGILQDDDINEVDSEEQQHQGFGGVSDFDRPPYCWDYLGFNNGNRSENSEVQE 240

Query: 296 RESDVGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAID 355
             SD GSVVNDNF+ F+V+ +  V V DDD+GTPIQLDTDVSNVFDTYQLRAEQQEIAID
Sbjct: 241 IVSDAGSVVNDNFEGFYVDVD--VDVVDDDVGTPIQLDTDVSNVFDTYQLRAEQQEIAID 300

Query: 356 SDTDEGGELGVEEAIRDLEWEILLAVNNFNREVYDMDFNVNMYEAILGEVEEHMNDWRGS 415
           SDTDEGGE GVE+AIRDLEWEILLAVNNFNREVYDMDFNV+MYEAILGEVE+ MN+WRGS
Sbjct: 301 SDTDEGGEFGVEDAIRDLEWEILLAVNNFNREVYDMDFNVDMYEAILGEVEDRMNEWRGS 360

Query: 416 PPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLR 475
           PPAA SVI NLPSV LS E L  +EVVCAICK+EV  EEVVKQLPC HYYHGECIVPWLR
Sbjct: 361 PPAAGSVIENLPSVQLSHEGLVENEVVCAICKEEVLGEEVVKQLPCLHYYHGECIVPWLR 420

Query: 476 IRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDANEDLSPDSQEQH 509
           +RNTCPVCRHELPTDDAEYE+RKRERE+E GLNVD NEDLS D Q  H
Sbjct: 421 MRNTCPVCRHELPTDDAEYEYRKREREVEVGLNVDPNEDLSQDLQVSH 455

[Close]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Match: G7ZV10_MEDTR (E3 ubiquitin-protein ligase RNF181 OS=Medicago truncatula GN=MTR_6g016350 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 7.500e-40
Identity = 131/359 (36.49%), Postives = 187/359 (52.09%), Query Frame = 1


		  
Query: 172 DPNCEFSGEGER----IGGLSDKDEVDLELGLGLGAD--HDAGLNPSYASPMIEEPQHFE 231
           DP+C +  E +        ++D  + + ELGLGLG D  ++      Y     ++   F 
Sbjct: 42  DPSCPWDDEEDTRINPFSNIADFHQGEPELGLGLGFDVEYEYENETQYNDDNYDDVFDFS 101

Query: 232 ----------GLRIVNIDDSDSDSEDGDHHHRGFGGVSDFDRPP-YCWDYLGFNNGNRSE 291
                     GLR+V    +DS+S   D     +GG +D +R    CWD L   + +RS 
Sbjct: 102 SLVGGGGDSGGLRVVEFG-TDSESSGNDEEF-DYGGENDDERVSGLCWDSLCLEDDHRSV 161

Query: 292 NVETQERESDVGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQ 351
                + E  +   VN+N     +EE    ++ D+     +++D DV NV    ++  + 
Sbjct: 162 ---LNDWEEVIEGRVNENE----IEEASSSLLIDE-----VEVDVDV-NV--EVEIDEQS 221

Query: 352 QEIAIDSDTDEGGELGVEEAIRDLEWEILLAVNNFNRE----------------VYDMDF 411
            E   + + DE GE    EA+R LEWEILLA NN  R                 V+D   
Sbjct: 222 MESGFEGEEDEAGE----EALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGII 281

Query: 412 NVNM-YEAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSE 471
           + N  Y+ + G++ E+ +  +GSPPAA S + NLP V L+ E LK  +VVCA+CKDEV+ 
Sbjct: 282 SGNTDYDILFGQLLENDSGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTV 341

Query: 472 EEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDA 497
           EE V +LPC H YHG+CI+PWL IRNTCPVCR+ELPTDD +YE  K  R   + L+ DA
Sbjct: 342 EEKVGKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVARDLLDFDA 379

[Close]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Match: A0A151QPX1_CAJCA (E3 ubiquitin-protein ligase CIP8 OS=Cajanus cajan GN=KK1_046995 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.900e-39
Identity = 139/390 (35.64%), Postives = 181/390 (46.41%), Query Frame = 1


		  
Query: 124 HHHRCHHEHDHDQ---VSYSNLFQRSSSQNAFISDGAIGLGLGLGLGTGLGDPNCEFSGE 183
           H HR HH H H      S ++    S S + F++D                  +C+ +  
Sbjct: 4   HRHRHHHHHHHSSNPFASSTHSDSDSDSVSCFVTDLFESRSRLC---------SCDDTDI 63

Query: 184 GERIGGLSDKDEVDLELGLGLGAD---HDAGLNPSYASPMIEEPQHFEGLRIVNI-DDSD 243
               G + D    D  LGLGLG     H    N       +      +GLR+V    DSD
Sbjct: 64  NPFSGAVCDLHRTDQVLGLGLGFGVEVHAPSQNDDGNRDSVFNFDGSDGLRVVGFGSDSD 123

Query: 244 SDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDAF 303
           S SE+G    R  GG  DFD    CWD L   +                   +N++F+  
Sbjct: 124 SSSEEGGD--RVGGGFDDFD-VRLCWDSLCLEDQR----------------TLNESFEWE 183

Query: 304 FVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTDEGGELGVEEAIR 363
            VEE    V E +DLG  +  + ++    D   + +     A + + +E  E   EEA+R
Sbjct: 184 EVEER---VSEREDLGLVVD-EVEIEGGDDGNSVASGFTNAAEEEEEEEEEEDAGEEALR 243

Query: 364 DLEWEILLAVNNFNREV--------------------YDMDFNVNMYEAILGEVEEHMND 423
            LEWEILLAVNN  R V                     D       Y+ + G+  E+ N 
Sbjct: 244 YLEWEILLAVNNSERNVNNAGGLEHEGSVGGADLVTIQDGYVYAAEYDVLFGQFLENENA 303

Query: 424 WRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIV 483
            +GSPPAA SV+ +LP V LS E L+   V CAICKDE+  EE V++LPC H YHG+CI 
Sbjct: 304 LKGSPPAAKSVVESLPLVELSKEELEGKSVACAICKDEILLEEKVRRLPCSHCYHGDCIF 361

Query: 484 PWLRIRNTCPVCRHELPTDDAEYEFRKRER 487
           PWL IRNTCPVCR ELPTDD +YE RK  R
Sbjct: 364 PWLSIRNTCPVCRFELPTDDPDYEQRKVHR 361

[Close]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Match: K4B6Z7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.000e-38
Identity = 126/326 (38.65%), Postives = 175/326 (53.68%), Query Frame = 1


		  
Query: 186 GLSDKDEVDLELGLG-LGADHDAGLNPSYASPMIEEPQHFEGLRIVNIDDSDSDSEDGDH 245
           G  D + V LE   G  G+D+D  L PS  + +       +G+R+V +  SDSDS++ + 
Sbjct: 110 GFDDGNRVILEDVYGDFGSDYDGVLLPSDTNGV----DTGDGIRVVGVVGSDSDSQEVEL 169

Query: 246 HHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESDVGSVVNDNFDAFFVEEEGFV 305
           +      V + D+    W  L  ++          +R+      VND F+   V E G  
Sbjct: 170 N------VGEIDQANDFWSCLRIDD----------QRD------VNDEFEWEEVNERG-- 229

Query: 306 VVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSD--TDEGGELG---VEEAIRDLE 365
             ED D          +S+V D  +      EI++ SD  + EGG      V+E +R+LE
Sbjct: 230 --EDRDY---------LSSVIDGIE------EISVSSDISSSEGGNSNSHSVDEPVRNLE 289

Query: 366 WEILLAVNNFNREVYDMDFN------VNM--YEAILGEVEEHMNDWRGSPPAADSVIVNL 425
           WE+LLAVNN  R + ++D N      VN   ++A+ G+  E   + +GSPPAA SVI NL
Sbjct: 290 WEVLLAVNNIERSL-ELDGNDDGIAHVNETDHDALFGQFLESEGNLKGSPPAAKSVIENL 349

Query: 426 PSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHE 485
           P VTL  E  K++   CA+CKDE+   E V +LPC HYYH ECI+PWL IRNTCPVCRHE
Sbjct: 350 PLVTLKDEENKIA---CAVCKDEILVVEKVTELPCSHYYHWECIIPWLNIRNTCPVCRHE 386

Query: 486 LPTDDAEYEFRKREREMEEGLNVDAN 498
           LPTDD +YE RK  R    G  + ++
Sbjct: 410 LPTDDTDYERRKIGRRPGAGAQLSSD 386

[Close]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.300e-20
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 1


		  
Query: 384 EAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQ 443
           E ++ ++ E+  +  G+PPA+ S I  LP+V ++ ++LK     CA+C DE  +   VKQ
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQ 231

Query: 444 LPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKR 485
           +PC H +H +C++PWL + N+CPVCR ELPTDD +YE R +
Sbjct: 232 MPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQ 272

[Close]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.600e-19
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 1


		  
Query: 367 NNFNREVYDMDFNVNMY------EAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEV 426
           NN + + + +  N+  Y      E ++ ++ E+  +  G+PPA+ S I  LP V ++   
Sbjct: 157 NNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSN 216

Query: 427 LKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYE 486
           L      CA+C D+  E    KQ+PC H YH +C++PWL + N+CPVCRHELPTDD +YE
Sbjct: 217 LNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYE 276

Query: 487 FRKREREMEEGLNVDANEDLSPDSQEQ 508
            R R  +   G N   N     D   +
Sbjct: 277 RRVRGAQGTSGGNDGDNSGQRSDGDNR 303

[Close]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.800e-19
Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 1


		  
Query: 383 YEAILGEVEEHMNDW----RGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEE 442
           YEA+L  + E         RG+PPAA S I  L +  +S    ++  +VCA+CKD +   
Sbjct: 209 YEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMV-MVCAVCKDGMVMG 268

Query: 443 EVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKRER 487
           E  K+LPC H YHG+CIVPWL  RN+CPVCR +L TDDAEYE  +++R
Sbjct: 269 ETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKR 315

[Close]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.000e-18
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 1


		  
Query: 387 LGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPC 446
           LG ++    D R  PPAA  V+ +LP VT++ E    + + C +C  E  E E V+QLPC
Sbjct: 39  LGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAA-LKCPVCLLEFEEGETVRQLPC 98

Query: 447 FHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEE 491
            H +H  CI+PWL   N+CP+CRHELPTD  EYE  K+E+E  +
Sbjct: 99  EHLFHSSCILPWLGKTNSCPLCRHELPTDSPEYEEYKQEKERRQ 141

[Close]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.800e-18
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 1


		  
Query: 387 LGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPC 446
           LG V+    D R  PPA+  V+ +LP VT++ E    + + C +C  E  E E V+QLPC
Sbjct: 39  LGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAA-LKCPVCLLEFEEGETVRQLPC 98

Query: 447 FHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKRER 487
            H +H  CI+PWL   N+CP+CRHELPTD  +YE  K+E+
Sbjct: 99  EHLFHSACILPWLGKTNSCPLCRHELPTDSPDYEEFKQEK 137

[Close]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Match: AT5G15820.1 (RING/U-box superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 8.500e-35
Identity = 72/135 (53.33%), Postives = 90/135 (66.67%), Query Frame = 1


		  
Query: 360 WEILLAVNNFNREVYDMDFNVNM----------YEAILGEVEEHMNDWRGSPPAADSVIV 419
           WEILL  N  N    D+D  V +          Y AI+G++ ++    +G+PPA+ SV+ 
Sbjct: 213 WEILLYDNMTNSAPMDLDVEVWLDSVDGYAPMDYNAIIGQMFDNETGIKGTPPASKSVVD 272

Query: 420 NLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCR 479
            LP V L+ E L    +VCAICKDEV  +E VK+LPC HYYHGECI+PWL IRNTCPVCR
Sbjct: 273 GLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCR 332

Query: 480 HELPTDDAEYEFRKR 485
           HELPTDD EYE ++R
Sbjct: 333 HELPTDDLEYERKRR 347

[Close]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Match: AT3G02340.1 (RING/U-box superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 1.200e-33
Identity = 111/300 (37.00%), Postives = 146/300 (48.67%), Query Frame = 1


		  
Query: 225 EGLRIVNIDDSDSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRSENVETQERESD 284
           +GLR+  ID SDSD EDG         V DF       D  G N GN S  VE       
Sbjct: 139 QGLRVTGID-SDSDCEDG---------VFDFISE----DSSG-NRGNDSGRVE------- 198

Query: 285 VGSVVNDNFDAFFVEEEGFVVVEDDDLGTPIQLDTDVSNVFDTYQLRAEQQEIAIDSDTD 344
           VG+ +   +D  F   EG V+ +++               ++  Q        +   D D
Sbjct: 199 VGTGLPPVWDHLF--GEGTVLADEE---------------WEEVQNAINWTAFSGPEDED 258

Query: 345 EGGELGV-----EEAIRDLEWEILLAVNN------------FNREVYDMDFNVNMY---- 404
           E  EL       EE   +L+W++LL VNN             N +  D D+ + +     
Sbjct: 259 EEDELSSLSRDDEEEDHELDWQVLLTVNNVVNYIEQAEGIMLNPDDIDPDYYLYLSGLDE 318

Query: 405 -----------EAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICK 464
                      +AILG++ +     RG+PPAA SVI +LP V L+ E L     VCA+CK
Sbjct: 319 FDENHSGHYDADAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCK 378

Query: 465 DEVSEEEVVKQLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEEGL 493
           DE+  EE V++LPC H+YHGECI+PWL IRNTCPVCR+ELPTDD EYE  K     + GL
Sbjct: 379 DEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYERHKSSERGDTGL 399

[Close]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.600e-25
Identity = 95/279 (34.05%), Postives = 142/279 (50.90%), Query Frame = 1


		  
Query: 227 LRIVNIDDSDSDSEDGDHHHRGFGGVSDFDRPPYCWDYLGFNNGNRS-------ENVETQ 286
           +R++ ++ S SD +DG  + R   G+   +   Y  D   + + + S       ++++ +
Sbjct: 106 IRLITVE-SGSDDDDGVENERELWGIDLNEEDVYVNDDDEYEDDDVSVTIPLCWDSLQLE 165

Query: 287 ERESDVGSVVNDNFDAFFVEEEGFVVVEDD-DLGTPI-QLDTDVSNVFDTYQLRAEQQEI 346
           +RE     V  D FD   V   G   V+D+ ++ +   Q+D +  ++     + +   E 
Sbjct: 166 DRE-----VTADEFDWEEVGGGGGGGVDDEREIRSGFAQIDMNDESLISASPIIS--LEG 225

Query: 347 AIDSDTDEG-GELGVEEAIRDLEWEILLAVN---NF---NREVY---DMDFNVNMYEAIL 406
            +  +  EG G LG         WE+LL      NF   NRE+Y   D D  V  Y+ + 
Sbjct: 226 LVTRERAEGSGNLG---------WEVLLNHTLEINFDVDNRELYIGGDHDDYVQDYDMLF 285

Query: 407 GEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQLPCF 466
            +  +      G PP + S + NLP V L  E      +VCA+CKDE++      QLPC 
Sbjct: 286 EQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCN 345

Query: 467 HYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKRER 487
           H YH ECIVPWL++RNTCPVCR+ELPTDDAEYE RK +R
Sbjct: 346 HKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRKTQR 367

[Close]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Match: AT5G01980.1 (RING/U-box superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 2.200e-22
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 1


		  
Query: 383 YEAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVK 442
           ++ +L ++ E  N  RG+PPA+ S + NLP V ++ E + +  +VCAICK+  S      
Sbjct: 306 FDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHV-MKGLVCAICKELFSLRNETT 365

Query: 443 QLPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKREREMEEGLNVDANEDLSP 502
           QLPC H YH  CIVPWL  RN+CP+CR+ELPTDD +YE  KR         +D +ED S 
Sbjct: 366 QLPCLHLYHAHCIVPWLSARNSCPLCRYELPTDDKDYEEGKRN-------VLDVSED-SS 425

Query: 503 DSQEQHPTGEEK 515
            S +   +GEE+
Sbjct: 426 SSDDGTESGEEE 428

[Close]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.800e-21
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 1


		  
Query: 384 EAILGEVEEHMNDWRGSPPAADSVIVNLPSVTLSCEVLKVSEVVCAICKDEVSEEEVVKQ 443
           E ++ ++ E+  +  G+PPA+ S I  LP+V ++ ++LK     CA+C DE  +   VKQ
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQ 231

Query: 444 LPCFHYYHGECIVPWLRIRNTCPVCRHELPTDDAEYEFRKR 485
           +PC H +H +C++PWL + N+CPVCR ELPTDD +YE R +
Sbjct: 232 MPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQ 272

The following BLAST results are available for this feature:

BLAST of Spo24364.1 vs. NCBI nr
BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
BLAST of Spo24364.1 vs. TAIR (Arabidopsis)

BLAST of Spo24364.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902223645\|gb\|KNA19524.1\|	5.4e-241	92.6	hypothetical protein SOVF_0596...	[more]
gi\|731316176\|ref\|XP_010694538.1\|	2.4e-180	73.9	PREDICTED: uncharacterized pro...	[more]
gi\|922350663\|ref\|XP_013451167.1\|	1.1e-39	36.4	zinc finger, C3HC4 type (RING ...	[more]
gi\|1012319236\|gb\|KYP32349.1\|	4.1e-39	35.6	E3 ubiquitin-protein ligase CI...	[more]
gi\|460375210\|ref\|XP_004233400.1\|	1.0e-37	38.6	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo24364.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RKR9_SPIOL	3.8e-241	92.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8D3I4_BETVU	1.7e-180	73.9	Uncharacterized protein OS=Bet...	[more]
G7ZV10_MEDTR	7.5e-40	36.4	E3 ubiquitin-protein ligase RN...	[more]
A0A151QPX1_CAJCA	2.9e-39	35.6	E3 ubiquitin-protein ligase CI...	[more]
K4B6Z7_SOLLC	7.0e-38	38.6	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo24364.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RNG1L_ARATH	3.3e-20	43.5	E3 ubiquitin-protein ligase RI...	[more]
RING1_GOSHI	1.6e-19	36.0	E3 ubiquitin-protein ligase RI...	[more]
CIP8_ARATH	2.8e-19	48.1	E3 ubiquitin-protein ligase CI...	[more]
RN181_XENTR	1.0e-18	46.1	E3 ubiquitin-protein ligase RN...	[more]
RN181_XENLA	6.8e-18	46.0	E3 ubiquitin-protein ligase RN...	[more]

BLAST of Spo24364.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G15820.1	8.5e-35	53.3	RING/U-box superfamily protein	[more]
AT3G02340.1	1.2e-33	37.0	RING/U-box superfamily protein	[more]
AT5G08139.1	1.6e-25	34.0	RING/U-box superfamily protein	[more]
AT5G01980.1	2.2e-22	43.9	RING/U-box superfamily protein	[more]
AT3G19950.1	1.8e-21	43.5	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 428..469 score: 3.8
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 428..468 score: 7.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 428..469 score: 12
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 427..469 score: 0.
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 425..483 score: 2.0
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 348..513 score: 6.2E-47coord: 219..240 score: 6.2
None	No IPR available	PANTHER	PTHR22763:SF8	SUBFAMILY NOT NAMED	coord: 219..240 score: 6.2E-47coord: 348..513 score: 6.2
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 418..475 score: 5.42

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051013	microtubule severing
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0043547	positive regulation of GTPase activity
biological_process	GO:0043087	regulation of GTPase activity
biological_process	GO:0043622	cortical microtubule organization
biological_process	GO:0008152	metabolic process
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0010091	trichome branching
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008568	microtubule-severing ATPase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11339	0.73	Barchart \| Table
Spo24607	0.72	Barchart \| Table
Spo18468	0.69	Barchart \| Table
Spo07488	0.68	Barchart \| Table
Spo09305	0.66	Barchart \| Table
Spo00570	0.65	Barchart \| Table