Spo24380 (gene)

Overview
NameSpo24380
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionIntegral membrane HPP family protein
Locationchr5 : 9237745 .. 9242570 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGAACGTCCAAGGTGGAAGTCCACGCATGTACACTAGGATGCCAAGTCACATAACAAAGATAGAAAAAATGCATGCATGAGCTGGACAGACAACCGTATAGCCACATTATTATTGTTAATATGCCATCATTTTGACTCTTCATCCTCTTCAAGAGTTCCTCCCATTCTACCCCTTTTTTTCCCTTTAATAATTCTCAATTGTCGGTCCATTTCACTATTTTTATCAATTTTTTCTCACGACAAACAAGAACAACAACTTGTTTTTCTTAAATTAAAGATCTAAAAATGCAAATCCAATGTTCTAAAAACCTCATATTTTCTCCATTGTTTCCTCCCTCGAAGATTCTAAACAGGAAGAACATTAAACAATATGTGAACTTGAGTAATAGTAATGGAGGATCATCGGGTGTATTGTTTACGAGTTTTCCTAAGAGAAGGCGGTGTTTTAGTACCGTGATAGCTTCTTCTTCGACTAATGTGAACGCACCTTTGTTTGATACTTGGTCACCTGATAAAGCTACTCCTTCTCCTTCTCTTAGTGATGTTCTATGGCCTTCTCTTGGTATGTATATATATATATGTTCCTTTTATTTCATTTTTAGATTTTTTTTATAAGACGATTTTACTACATTTAAGGAGACGTTCTATTCGAGGGGAATACCTAAAACATTGCATACATTCATACTCTAGGAGTATATCTAATAAGATAACAAATTACCTAGTTATCTATTTGTGCCTATGCACTGGATCCAGTATAATACCAAGTATATGTTGAATATAATGCCCCTCAAAAAAAAGAAAAAAAAGAATTAGTATGATCTACAAATGTATATAATACCTCTGTTTCAAAAAGATCTTTACACTTACTATTTGCACGGATTCCGGTGCAATGTTTGACCATTATTATATCCAATTCTATATGGAAAAAAATTATAAAAAATTGATATTTATAAAATACATTTTGAAACGAATCTAACAAGATATCTCATGATAATTTTTGATCGATATAATAGTGAGAATTTATGGTCAAAATTTTGATTTTTGAACACATTTTTCAAAGCGTGAAAAACTTTATAAAACGAAGGTCGTATACGATTTGAATAGTTTATGAACAAAAAATGAAACAACATTTGCCAGAAGAAAATAACATGATATGGAAGTATGGAACACAATACTCCTTTTTTCTTTGTTTTTTTTTTCTTCATTGATTTTAGGAACATTTTAGCCCATATTTTTAAGGGTTTTATATAGATTCAATTATTAATATCCAAATCACTAAATTTGGTGACTATATAAAAACATCATGTAAATAGAGATTTCTATAGATAGAATATAGTTAAGGAGTAGTAGTAAATTTTGAAAATTCTCCAATTTTGACTTAGAAAGAGGGCCTAGCCGAGAATTCTTTAGCTATTCTTCATGTCACGCACTCCTTACTTGCATACTTAGCACAAATAGTATTACTACTATATAACGCTCTTATGTATATAATCAACATCTTACCAAATAGTTATACAATTTAATTAAATAGTTATGTTCAGTAATTAATATAATTAATCAAATAGTTATACTTTTTTATTGCACAATTGTATGTTTTAATGATAACATCAGTCTTATGCGTATGACGGTTTATAGAAAACCTACTCAAAAAGTAAGAAAGAGTGGTACAAAAGGGGACATCTTTAGGAAACTTCACTCACACCTGAAAATTTATTTTGGTCAATTTTCTCTATTTAGTGGAAAGCAAACTCATTTTAAAATTCAAAATTACATCTGTCTGTTATAGCCGGTCAAACTAATTTCACTCTAGAAAACAATTCAATTCTAGACGAAAATTCTACTTCTTTTCAATTGTGCTCGTATGTAAACCAAAAGAGCGTTAAATTAAATCATAATTTCCACCCTCATAAATAATGATAATTTTGTTTCCCTTTATGTATTTAATTATCAATTATGCTACCTAAACTAACAAATGAGTAAATTATTGAATCTTTTAAAAAAAATAGGGGCATTTGCGGGAATGGCAATGTTGGGTAAGGTGGACCAATTGCTAGCACCAAAAGGATTATCAATGACGATAGCGCCATTAGGGGCTGTTTGTGCTGTTTTATTCATCACTCCTAAATCTCCAGCTGCAAGGGTATGTACCATTGTACCCTACTCCTATCTCAACATTTACTATTATGTGATTGGTTCAATTATATTGCTTTGGGACCCATTTTTATCCAATATAATTATAAATTGACCATATGATATGAATTATATGATCATGTTCTTTTATTCTTTACCATTGTTTTTGTGTGGCTAAAGATCTTTCTTCCAATTCTTTACAATTATTGCCAAATTCTTCCAAATGTGAGTACTAGCACTACAAGAATTTGTATCTTTAACGACAACTTAATTACGACGGGGTCAAAAATCCCGTCGCAAAAGCCTTTTGCGACGGGGCTAACAACCAAACAATGACGGGAATAACCGTCGCAAATGTCTTTTACGACGGGCTTACGACGGATTTACGACGGGATTTCTATTAACGACGGCCCCTTTTATGACGGGTTCGCGACAGGAAATCCCGTCGTTAATCAACGATTATTGGCCTTTCGCGACGGGATTTCCCGTCGTTAATAATACAATTTATTGTAGTGTAGCTAGTTTATCATTTTGTCAAATTCTTCCAAATGTTTGATGTGAAACAACATCTCTGTTTTGTTTGACTTATTTTGACTTGTTTTAGATAAAACCAACTCAAAGAAAGTAAGTTCAGAGAAAATAAGTTTTTTTTCAAACATTTTCGTATACAAATAAAAAATTTCAGATAAAATGAGTTAAGATACGTACAAATAGGTTGGTTTCCCTATAAACATGTAAAGTTTGATACTCCGATACAATGTAATAGAGATAATTGTATATTCCGGTAGTAAATACGAGTTAATTGATTTGAATACGGCTTAAAGTTGAAGAAATATACCGAGTACCTTAGCAAATTAGGCCATGCATGTTCTATTCATTGTATTTCACTTACTTCAGTTATTATATATAAGTTTAGATAAAGCTAGAGTTAGATATATATTCAGATAAGTTCACATAATGGTTGATTAAAGGTACCCGAGCATAATATATAACTTAAACAAGTTCTAATAAGTTCAATTAAGCAAAAATTAGGTGAATAACGACACGGTACAAAGTTCACTATAGATATTTCAATCAGAAACTTTTGTGTAAGACCGTCTAACTGTTATACCATTTTTTTGGTATTAACTAAACTGGTGTAAAACATAACTAATTGAATAACAAAATAGTTAAGGTATAAAGACAAATAGATAAATTTATGAGTCGAATAGTTATTAATTTTGAACAAACTTATTATTAACTAAAACTCATAAAATCTTAACTAATTGATCTCATTGCTTAACTAATCAGTTTCATTGTTTAACTAATTGGTTAAGTGCTTAACTAATTGATTTCGTTGCTTAACTAATTGAATTTCAGACTTAACTAATTGGTTTCAGTGGTTAACTAATTAGTTATAACTAATTGGTTCCAGTGCATAAAAGTGGTCTAACCGTTATGCCGTCTTTCCTAAAAGTTTGTATATTTCAAACAGGTAACTTGTAACCTACTAAGCTGAATTAGGTTTAGATCAGTTTTAGTAATTAAGATAGGGAGTATTATTCATACTAATTACTCAGGGACAATTAAAATTGGTGCAGAAATACAACATGTTCATGGCACAAATAGGGTGTGCAGCAATAGGAGTCATAGCATTCACACTCTTGGGACCAGGTTGGCTTTCCAGGGGTGCTTCCCTTGCCGCTTCCATTGCCTTCATGATTTACACCAAATCTACTCACCCTCCTGGTAATTTATACTTCTATATATGCTTTGTAAGTTTGATTTTTGCACGTCAAAATTCTTGTAAAAGATGGTCTGATATATTCCAAGTCGTCGAACTAATTAAGTGTAACTTAAACGAAAAAATTGAAGGGCCAATTGAAACTAAAAGGTTTATCTAATTAGTGTAATTGTATGTATGTGTAGCTGCAAGTTTGCCATTATTGTTTATTGATGGAGCGAAGCTTCATGGACTAAATTATTGGTACGCGTTATTTCCTGGTGCAGCCGGATGTGTTCTCCTATCTCTCCTTGTAAGCTTTCCCCAACTTACAAATTACGCTAAAATGTCAAATACGTGTTTATCTGAACTTATCTTGACTTGACAGACTTATCACGGACATAATAATGATATTGACTTGGGAAATTTTCTTTGATTTTTATGATATTGCAGCAAGAGATTGTTTACTATTTGAAGGAGAATTTCAAGTTTTGATCCGTCAAAAAGAAAAAGAAAAAAGGTTTTGATTTAGAGCCCTAATTAAGAAAGGGAAGTTGAGCAGGAGTGTGTTACCGAGTACAGTACATAGTATTTTTTGAGGCACTCTTAAAAATGTTGGACGAAGGACACAAGTTGAAGTACTGATTAGTATTGCAAACAGCCAAATATATGGAGATTCCGTACAAAATGTACAGGAAATTGGATTCAAGAATTCAATGTAAACCGTAAATTATTATTCTTTGTACAAAATAAAATTACAAATGTTGTATTAATAAATAATAAGTTTATAATCATTCAGATCGAGCTCATATTGGTTGATTGGAAGACATACATTTGCTTCTTCCATGTATTTGTTGTTGTTCATTAATTTTTATGAAGCAGTTGCAACTCTTGCAAGTTACAATATATTGGATGTATGGTGAAAATTCTCAACTATGGAGTAATAGTATTGAGTTTGAGAATTGAACTATTGCAGCAAACACTCAAACAAA

mRNA sequence

TAGGAACGTCCAAGGTGGAAGTCCACGCATGTACACTAGGATGCCAAGTCACATAACAAAGATAGAAAAAATGCATGCATGAGCTGGACAGACAACCGTATAGCCACATTATTATTGTTAATATGCCATCATTTTGACTCTTCATCCTCTTCAAGAGTTCCTCCCATTCTACCCCTTTTTTTCCCTTTAATAATTCTCAATTGTCGGTCCATTTCACTATTTTTATCAATTTTTTCTCACGACAAACAAGAACAACAACTTGTTTTTCTTAAATTAAAGATCTAAAAATGCAAATCCAATGTTCTAAAAACCTCATATTTTCTCCATTGTTTCCTCCCTCGAAGATTCTAAACAGGAAGAACATTAAACAATATGTGAACTTGAGTAATAGTAATGGAGGATCATCGGGTGTATTGTTTACGAGTTTTCCTAAGAGAAGGCGGTGTTTTAGTACCGTGATAGCTTCTTCTTCGACTAATGTGAACGCACCTTTGTTTGATACTTGGTCACCTGATAAAGCTACTCCTTCTCCTTCTCTTAGTGATGTTCTATGGCCTTCTCTTGGGGCATTTGCGGGAATGGCAATGTTGGGTAAGGTGGACCAATTGCTAGCACCAAAAGGATTATCAATGACGATAGCGCCATTAGGGGCTGTTTGTGCTGTTTTATTCATCACTCCTAAATCTCCAGCTGCAAGGAAATACAACATGTTCATGGCACAAATAGGGTGTGCAGCAATAGGAGTCATAGCATTCACACTCTTGGGACCAGGTTGGCTTTCCAGGGGTGCTTCCCTTGCCGCTTCCATTGCCTTCATGATTTACACCAAATCTACTCACCCTCCTGCTGCAAGTTTGCCATTATTGTTTATTGATGGAGCGAAGCTTCATGGACTAAATTATTGGTACGCGTTATTTCCTGGTGCAGCCGGATGTGTTCTCCTATCTCTCCTTCAAGAGATTGTTTACTATTTGAAGGAGAATTTCAAGTTTTGATCCGTCAAAAAGAAAAAGAAAAAAGGTTTTGATTTAGAGCCCTAATTAAGAAAGGGAAGTTGAGCAGGAGTGTGTTACCGAGTACAGTACATAGTATTTTTTGAGGCACTCTTAAAAATGTTGGACGAAGGACACAAGTTGAAGTACTGATTAGTATTGCAAACAGCCAAATATATGGAGATTCCGTACAAAATGTACAGGAAATTGGATTCAAGAATTCAATGTAAACCGTAAATTATTATTCTTTGTACAAAATAAAATTACAAATGTTGTATTAATAAATAATAAGTTTATAATCATTCAGATCGAGCTCATATTGGTTGATTGGAAGACATACATTTGCTTCTTCCATGTATTTGTTGTTGTTCATTAATTTTTATGAAGCAGTTGCAACTCTTGCAAGTTACAATATATTGGATGTATGGTGAAAATTCTCAACTATGGAGTAATAGTATTGAGTTTGAGAATTGAACTATTGCAGCAAACACTCAAACAAA

Coding sequence (CDS)

ATGCAAATCCAATGTTCTAAAAACCTCATATTTTCTCCATTGTTTCCTCCCTCGAAGATTCTAAACAGGAAGAACATTAAACAATATGTGAACTTGAGTAATAGTAATGGAGGATCATCGGGTGTATTGTTTACGAGTTTTCCTAAGAGAAGGCGGTGTTTTAGTACCGTGATAGCTTCTTCTTCGACTAATGTGAACGCACCTTTGTTTGATACTTGGTCACCTGATAAAGCTACTCCTTCTCCTTCTCTTAGTGATGTTCTATGGCCTTCTCTTGGGGCATTTGCGGGAATGGCAATGTTGGGTAAGGTGGACCAATTGCTAGCACCAAAAGGATTATCAATGACGATAGCGCCATTAGGGGCTGTTTGTGCTGTTTTATTCATCACTCCTAAATCTCCAGCTGCAAGGAAATACAACATGTTCATGGCACAAATAGGGTGTGCAGCAATAGGAGTCATAGCATTCACACTCTTGGGACCAGGTTGGCTTTCCAGGGGTGCTTCCCTTGCCGCTTCCATTGCCTTCATGATTTACACCAAATCTACTCACCCTCCTGCTGCAAGTTTGCCATTATTGTTTATTGATGGAGCGAAGCTTCATGGACTAAATTATTGGTACGCGTTATTTCCTGGTGCAGCCGGATGTGTTCTCCTATCTCTCCTTCAAGAGATTGTTTACTATTTGAAGGAGAATTTCAAGTTTTGA

Protein sequence

MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24380.1Spo24380.1mRNA


Homology
[Close]
BLAST of Spo24380.1 vs. NCBI nr
Match: gi|902179100|gb|KNA09291.1| (hypothetical protein SOVF_154980 [Spinacia oleracea])

HSP 1 Score: 468.0 bits (1203), Expect = 9.700e-129
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1 

		  

Query: 1   MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS 60
           MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS
Sbjct: 1   MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS 60

Query: 61  SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL 120
           SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL
Sbjct: 61  SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL 120

Query: 121 GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT 180
           GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT
Sbjct: 121 GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT 180

Query: 181 KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 236
           KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF
Sbjct: 181 KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 235
[Close]
BLAST of Spo24380.1 vs. NCBI nr
Match: gi|731335151|ref|XP_010678586.1| (PREDICTED: uncharacterized protein LOC104894114 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 319.7 bits (818), Expect = 4.300e-84
Identity = 168/214 (78.50%), Postives = 183/214 (85.51%), Query Frame = 1 

		  

Query: 31  NLSNSNGGSS-GVLF----TSFPKRRRCFSTVIASSST---NVNAPL-FDTWSPDKATPS 90
           N S+ NGG   GV +     S  K+R     V +SSS    NV AP  +DTWSPDKATPS
Sbjct: 50  NYSSLNGGVVIGVKYYDPLVSKNKKRTSLKVVASSSSASSGNVGAPTSWDTWSPDKATPS 109

Query: 91  PSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNM 150
           P LSDVLWPS+GAFA MAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFI+PKSPAARKYNM
Sbjct: 110 PCLSDVLWPSIGAFAAMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFISPKSPAARKYNM 169

Query: 151 FMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLH 210
           FMAQIGCAAIGVIAFTLLGPGWL+RGA+LAAS+AFM YT+S HPPAASLPLLFIDGAKLH
Sbjct: 170 FMAQIGCAAIGVIAFTLLGPGWLARGAALAASLAFMTYTRSVHPPAASLPLLFIDGAKLH 229

Query: 211 GLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 236
           GLNYWYALFPGAAGC++L LLQEI+YYLKEN+KF
Sbjct: 230 GLNYWYALFPGAAGCMILCLLQEIIYYLKENYKF 263
[Close]
BLAST of Spo24380.1 vs. NCBI nr
Match: gi|590667336|ref|XP_007037209.1| (Integral membrane HPP family protein [Theobroma cacao])

HSP 1 Score: 290.0 bits (741), Expect = 3.600e-75
Identity = 139/187 (74.33%), Postives = 166/187 (88.77%), Query Frame = 1 

		  

Query: 49  KRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLL 108
           K+ R +  V+ASSS NV APL+D+W P+K + + SLSD+LWPS GAFA MA+LGK+DQ+L
Sbjct: 63  KQGREYGVVVASSS-NVAAPLWDSWKPEKTSSAASLSDILWPSAGAFAAMAILGKMDQIL 122

Query: 109 APKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGA 168
           APKG+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV+AF++ GPGWL+R A
Sbjct: 123 APKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSIFGPGWLARSA 182

Query: 169 SLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYY 228
           +LAAS+AFMIYT+STH PAASLP+LFIDG KLH LN+WYA FPGAAGC++LSL+QE+V Y
Sbjct: 183 ALAASVAFMIYTRSTHAPAASLPILFIDGVKLHHLNFWYAFFPGAAGCIILSLIQEVVCY 242

Query: 229 LKENFKF 236
           LK+NFKF
Sbjct: 243 LKDNFKF 248
[Close]
BLAST of Spo24380.1 vs. NCBI nr
Match: gi|297734031|emb|CBI15278.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 289.3 bits (739), Expect = 6.200e-75
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1 

		  

Query: 38  GSSGVLFTS--FPKRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAF 97
           GS G+ FTS    +RRR F  V   +S+NV AP +D W P+K++ +PSLSD+LWPS GAF
Sbjct: 29  GSLGLHFTSRKIDRRRRDFGIV---ASSNVAAPFWDGWKPEKSSAAPSLSDILWPSAGAF 88

Query: 98  AGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIA 157
           A MA+LGK+DQ LA KG+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV+A
Sbjct: 89  AAMAILGKMDQTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLA 148

Query: 158 FTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAG 217
           F+LLGPGWL+R  +L ASIAFMIYT+STHPPAASLPLLFIDGAK H LN+WYALFPGA  
Sbjct: 149 FSLLGPGWLARSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATA 208

Query: 218 CVLLSLLQEIVYYLKENFKF 236
           C+LL L+QE+V YLK+NFKF
Sbjct: 209 CILLCLIQEMVCYLKQNFKF 225
[Close]
BLAST of Spo24380.1 vs. NCBI nr
Match: gi|225456660|ref|XP_002267093.1| (PREDICTED: uncharacterized protein LOC100260399 isoform X1 [Vitis vinifera])

HSP 1 Score: 289.3 bits (739), Expect = 6.200e-75
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1 

		  

Query: 38  GSSGVLFTS--FPKRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAF 97
           GS G+ FTS    +RRR F  V   +S+NV AP +D W P+K++ +PSLSD+LWPS GAF
Sbjct: 46  GSLGLHFTSRKIDRRRRDFGIV---ASSNVAAPFWDGWKPEKSSAAPSLSDILWPSAGAF 105

Query: 98  AGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIA 157
           A MA+LGK+DQ LA KG+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV+A
Sbjct: 106 AAMAILGKMDQTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLA 165

Query: 158 FTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAG 217
           F+LLGPGWL+R  +L ASIAFMIYT+STHPPAASLPLLFIDGAK H LN+WYALFPGA  
Sbjct: 166 FSLLGPGWLARSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATA 225

Query: 218 CVLLSLLQEIVYYLKENFKF 236
           C+LL L+QE+V YLK+NFKF
Sbjct: 226 CILLCLIQEMVCYLKQNFKF 242
[Close]
BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154980 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 6.800e-129
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1 

		  

Query: 1   MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS 60
           MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS
Sbjct: 1   MQIQCSKNLIFSPLFPPSKILNRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIAS 60

Query: 61  SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL 120
           SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL
Sbjct: 61  SSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPL 120

Query: 121 GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT 180
           GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT
Sbjct: 121 GAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYT 180

Query: 181 KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 236
           KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF
Sbjct: 181 KSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 235
[Close]
BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9I9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115240 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.000e-84
Identity = 168/214 (78.50%), Postives = 183/214 (85.51%), Query Frame = 1 

		  

Query: 31  NLSNSNGGSS-GVLF----TSFPKRRRCFSTVIASSST---NVNAPL-FDTWSPDKATPS 90
           N S+ NGG   GV +     S  K+R     V +SSS    NV AP  +DTWSPDKATPS
Sbjct: 50  NYSSLNGGVVIGVKYYDPLVSKNKKRTSLKVVASSSSASSGNVGAPTSWDTWSPDKATPS 109

Query: 91  PSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNM 150
           P LSDVLWPS+GAFA MAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFI+PKSPAARKYNM
Sbjct: 110 PCLSDVLWPSIGAFAAMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFISPKSPAARKYNM 169

Query: 151 FMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLH 210
           FMAQIGCAAIGVIAFTLLGPGWL+RGA+LAAS+AFM YT+S HPPAASLPLLFIDGAKLH
Sbjct: 170 FMAQIGCAAIGVIAFTLLGPGWLARGAALAASLAFMTYTRSVHPPAASLPLLFIDGAKLH 229

Query: 211 GLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 236
           GLNYWYALFPGAAGC++L LLQEI+YYLKEN+KF
Sbjct: 230 GLNYWYALFPGAAGCMILCLLQEIIYYLKENYKF 263
[Close]
BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Match: A0A061FW34_THECC (Integral membrane HPP family protein OS=Theobroma cacao GN=TCM_013819 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.500e-75
Identity = 139/187 (74.33%), Postives = 166/187 (88.77%), Query Frame = 1 

		  

Query: 49  KRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLL 108
           K+ R +  V+ASSS NV APL+D+W P+K + + SLSD+LWPS GAFA MA+LGK+DQ+L
Sbjct: 63  KQGREYGVVVASSS-NVAAPLWDSWKPEKTSSAASLSDILWPSAGAFAAMAILGKMDQIL 122

Query: 109 APKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGA 168
           APKG+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV+AF++ GPGWL+R A
Sbjct: 123 APKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSIFGPGWLARSA 182

Query: 169 SLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYY 228
           +LAAS+AFMIYT+STH PAASLP+LFIDG KLH LN+WYA FPGAAGC++LSL+QE+V Y
Sbjct: 183 ALAASVAFMIYTRSTHAPAASLPILFIDGVKLHHLNFWYAFFPGAAGCIILSLIQEVVCY 242

Query: 229 LKENFKF 236
           LK+NFKF
Sbjct: 243 LKDNFKF 248
[Close]
BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Match: D7SIG7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05620 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.300e-75
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1 

		  

Query: 38  GSSGVLFTS--FPKRRRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAF 97
           GS G+ FTS    +RRR F  V   +S+NV AP +D W P+K++ +PSLSD+LWPS GAF
Sbjct: 29  GSLGLHFTSRKIDRRRRDFGIV---ASSNVAAPFWDGWKPEKSSAAPSLSDILWPSAGAF 88

Query: 98  AGMAMLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIA 157
           A MA+LGK+DQ LA KG+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV+A
Sbjct: 89  AAMAILGKMDQTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLA 148

Query: 158 FTLLGPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAG 217
           F+LLGPGWL+R  +L ASIAFMIYT+STHPPAASLPLLFIDGAK H LN+WYALFPGA  
Sbjct: 149 FSLLGPGWLARSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATA 208

Query: 218 CVLLSLLQEIVYYLKENFKF 236
           C+LL L+QE+V YLK+NFKF
Sbjct: 209 CILLCLIQEMVCYLKQNFKF 225
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BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PMX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G073800 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.400e-73
Identity = 137/196 (69.90%), Postives = 168/196 (85.71%), Query Frame = 1 

		  

Query: 41  GVLFTSFPKRRRCFSTVIASSSTNVNAPLFDTWSPDKATP-SPSLSDVLWPSLGAFAGMA 100
           GV   +  ++RR +  V+ASSS+N  APL+D+W P+K++  SPSLSD++WPS GAFA MA
Sbjct: 47  GVFQRTRQEKRRGYGVVVASSSSNAAAPLWDSWKPEKSSAASPSLSDIIWPSAGAFAAMA 106

Query: 101 MLGKVDQLLAPKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLL 160
           +LGK+DQ+LAP+G+SMTIAPLGAVCAVLF TP SPAARKYNMFMAQIGCAAIGV AF++ 
Sbjct: 107 ILGKMDQILAPQGVSMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVAAFSVF 166

Query: 161 GPGWLSRGASLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLL 220
           GPGWL+R A+LAASIAFMI T+S HPPAASLP+LFIDG KLH LN+W+ALFPGAA C++L
Sbjct: 167 GPGWLARSAALAASIAFMILTRSNHPPAASLPILFIDGVKLHHLNFWFALFPGAAACIIL 226

Query: 221 SLLQEIVYYLKENFKF 236
            L+QE+V +LK NFKF
Sbjct: 227 CLMQEVVCFLKNNFKF 242
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BLAST of Spo24380.1 vs. ExPASy Swiss-Prot
Match: Y9096_DICDI (Transmembrane protein DDB_G0269096 OS=Dictyostelium discoideum GN=DDB_G0269096 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.200e-7
Identity = 51/213 (23.94%), Postives = 87/213 (40.85%), Query Frame = 1 

		  

Query: 22  NRKNIKQYVNLSNSNGGSSGVLFTSFPKRRRCFSTVIASSSTNVNAPLFDTW---SPDKA 81
           N  N     N +N+N  ++      F K   C    I           F  W     DK 
Sbjct: 67  NNNNNNNNNNNNNNNNNNNKNEDRKFKKTLFCIKMYIIQ--------YFKKWLGTGKDKR 126

Query: 82  TPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKG-LSMTIAPLGAVCAVLFITPKSPAAR 141
            P P L ++ W  L +F G+ +L  +    A    + + I    A   ++F  PKSP A+
Sbjct: 127 PPIPDLEEIGWTWLASFTGILVLALIHYREALDAQMQVLIGSFAASAVIIFGVPKSPLAQ 186

Query: 142 KYNMFMAQIGCAAIG-VIAFTLLGPGW---LSRGASLAASIAFMIYTKSTHPPAASLPLL 201
             N+ M     A +G VI   L+       ++   +++ SI  M +T S HPP  +  L+
Sbjct: 187 PRNLIMGHFLSAVVGSVIRVALVYTNANFEVACALAVSLSIMLMQFTNSLHPPGGATALI 246

Query: 202 FIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIV 227
            + G +     +++   P  +G +++ L   +V
Sbjct: 247 CVMGVEQRWRGFYFIFVPILSGALIMLLTALVV 271
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BLAST of Spo24380.1 vs. TAIR (Arabidopsis)
Match: AT5G62720.1 (Integral membrane HPP family protein)

HSP 1 Score: 261.9 bits (668), Expect = 3.700e-70
Identity = 126/187 (67.38%), Postives = 158/187 (84.49%), Query Frame = 1 

		  

Query: 51  RRCFSTVIASSSTNVNAPLFDTWSPDKATPSPSL--SDVLWPSLGAFAGMAMLGKVDQLL 110
           RR  STV+AS+  N+ AP +D+W PDK   + +L  SDV+WP+ GAFA MA+LG++DQ+L
Sbjct: 58  RRRVSTVVASAG-NLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQML 117

Query: 111 APKGLSMTIAPLGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGA 170
           +PKG+SM++APLGAV A+LFITP +PAARKYN+F+AQIGCAAIGV+AF++ GPGWL+R  
Sbjct: 118 SPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLARSV 177

Query: 171 SLAASIAFMIYTKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYY 230
           +LAASIAFM+ T++ HPPAASLPL+FIDGAK H LN+WYALFPGAA CV+L LLQ IV Y
Sbjct: 178 ALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCLLQSIVCY 237

Query: 231 LKENFKF 236
           LKEN KF
Sbjct: 238 LKENMKF 243
[Close]
BLAST of Spo24380.1 vs. TAIR (Arabidopsis)
Match: AT3G47980.1 (Integral membrane HPP family protein)

HSP 1 Score: 251.9 bits (642), Expect = 3.800e-67
Identity = 119/176 (67.61%), Postives = 147/176 (83.52%), Query Frame = 1 

		  

Query: 60  SSSTNVNAPLFDTWSPDKATPSPSLSDVLWPSLGAFAGMAMLGKVDQLLAPKGLSMTIAP 119
           +SS +  A  +++W P+K T +PSLSDV+WP+ GAFA MA++G++DQ+L PKG+SM++AP
Sbjct: 77  ASSDDFPAVSWESWKPEKTTVAPSLSDVIWPAAGAFAAMAIMGRIDQMLNPKGISMSVAP 136

Query: 120 LGAVCAVLFITPKSPAARKYNMFMAQIGCAAIGVIAFTLLGPGWLSRGASLAASIAFMIY 179
           LGAV A+LF TP +PAARKYNMF AQIGCAAIGV+AF+  GP WL+R  +LAASIAFM+ 
Sbjct: 137 LGAVSAILFTTPSAPAARKYNMFTAQIGCAAIGVLAFSAFGPSWLARSTALAASIAFMVI 196

Query: 180 TKSTHPPAASLPLLFIDGAKLHGLNYWYALFPGAAGCVLLSLLQEIVYYLKENFKF 236
           T++ HPPAASLPLLFIDGAKLH LN+WYALFPGAA C+LL  LQ IV YLKEN KF
Sbjct: 197 TRANHPPAASLPLLFIDGAKLHKLNFWYALFPGAAACILLCFLQAIVGYLKENLKF 252
The following BLAST results are available for this feature:
BLAST of Spo24380.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902179100|gb|KNA09291.1|9.7e-129100.hypothetical protein SOVF_1549... [more]
gi|731335151|ref|XP_010678586.1|4.3e-8478.5PREDICTED: uncharacterized pro... [more]
gi|590667336|ref|XP_007037209.1|3.6e-7574.3Integral membrane HPP family p... [more]
gi|297734031|emb|CBI15278.3|6.2e-7572.5unnamed protein product [Vitis... [more]
gi|225456660|ref|XP_002267093.1|6.2e-7572.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo24380.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QRZ6_SPIOL6.8e-129100.Uncharacterized protein OS=Spi... [more]
A0A0J8C9I9_BETVU3.0e-8478.5Uncharacterized protein OS=Bet... [more]
A0A061FW34_THECC2.5e-7574.3Integral membrane HPP family p... [more]
D7SIG7_VITVI4.3e-7572.5Putative uncharacterized prote... [more]
A0A0D2PMX3_GOSRA1.4e-7369.9Uncharacterized protein OS=Gos... [more]
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BLAST of Spo24380.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y9096_DICDI3.2e-723.9Transmembrane protein DDB_G026... [more]
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BLAST of Spo24380.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G62720.13.7e-7067.3Integral membrane HPP family p... [more]
AT3G47980.13.8e-6767.6Integral membrane HPP family p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007065HPPPFAMPF04982HPPcoord: 117..225
score: 5.6
NoneNo IPR availablePANTHERPTHR33741FAMILY NOT NAMEDcoord: 64..235
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006816 calcium ion transport
biological_process GO:0080022 primary root development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0015976 carbon utilization
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006642 triglyceride mobilization
biological_process GO:0009651 response to salt stress
biological_process GO:0032880 regulation of protein localization
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0080167 response to karrikin
biological_process GO:0032504 multicellular organism reproduction
biological_process GO:0019563 glycerol catabolic process
biological_process GO:0046166 glyceraldehyde-3-phosphate biosynthetic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006000 fructose metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0006096 glycolytic process
biological_process GO:0007030 Golgi organization
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006020 inositol metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006546 glycine catabolic process
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004807 triose-phosphate isomerase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0051087 chaperone binding
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo137000.73Barchart | Table
Spo204410.72Barchart | Table
Spo060310.69Barchart | Table
Spo154650.68Barchart | Table
Spo103730.67Barchart | Table
Spo270340.67Barchart | Table