Spo24414 (gene) | SpinachBase

Overview


Name	Spo24414
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L32-1
Location	chr2 : 20294905 .. 20299187 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGATCAAGAAGGGGTGTGCATAAAACAACATGGCTTCAATCTAGACGATGTCATTGATATTGAAAGAGTGAAGGAGGTAAGGTCGAGGATGGTTCATACCTTGGAGTATTTGTAAGATTTTTTGCTTTGGTGGTAGAAACACATTATGCCTACTAAGATTTTATAAATCGGGTTACTGGACTGGGTAACAGAGTTCAACTCAGTTATGAATGGACCTGATCACGTTAAAATGGATAATGTTGGGTCAAAGTTTATATTTGTACTAGCTCGAGTAACTTTGAATTCATAATTGGGTTAAGTTGGTTTGACTTCAGGTGATTTCATTTCGGGTTAATATTCGTGTCCAGTTTGAACTGGTTCATGCTAAATATGGGTTATACCGGTTTAATTCGGTTTGTGTCGAGTTTGGTCTGTGTGCTGGTGGATTACGGTACACATCAACTGGTTTACCGTGGGTATGTATGAGTCATATTCGAAAGATTAATCTTGGGTTCAGGTCAAGTTTGGATATGTTGAGTATCATATATACTTCGTATATGTCAACTTTAGATCAACTTAGGGTAAATTTCGATTTGGGCATATGGTTTGAGTTCAGATTGAGTTAGGGTTGTAATCTCGTATTGTATAGATTAAGTGAGTCTCAAGTTTACAATCAATTTAAGATCACTTTATTAATCAAATATTCCATGGCAAATTTAGTTTTTTTTAAAAAAGTTTCTATGACTTTGTCTCCGAATTATTTATCATACAAACAAAAGATACTAACTTTTGTAACAACTCGAAACTTGTCTTGATTTTTGAGAATTGAATCGGATTGAAGACAATTCAGTTGAATTTGAGTTCGTGTCTACAACAATGCAAGTTAAATCGGTTATCGAATTTTGTTGGGTTGAATTGATTGTGGTTGTTATCGGAAAAAACCAACTTTTCTATGGTTGCTGCATCAGATGCGGGTTTGTTTTAGTTAAAAGTTGTTGGGATTTAAATTGAGTTACGAGTCTCCTCAGGTTGCTAACGGATTAATTTCAAAGTCTGAATTCACTATGTTTAACGGATTTCTAATCATCATCAGGTCTGTTCAGATCAATTTCGGAATTTATGTTTCTCAGATAAACTCACTTATGATATCGCTTATTTTCACCGTACGAAACGATTTCTCAAGTCAGGTCGATTTTTGACACGTAAGGCGTAACTACGATCCTATTGAGTATGGCCGGCCATCTTCCCCTCTTCAGTTTTCACAAAATAAAGGCCCAAATACACAAACCCGTAGACCCGTGATAAGAAAAGCCCTAATAAGAACACTATAAACAAAGCTTCTAGGGTTTCACCGAAAGTTTCTCCGTAAGCTTCCCTGTCAAAGGTTTCTCCGTAAGTTTCTCTCGTTCTCTCTCCTCTTCTGCCATTAGTTCTCTTCATTTCCTGCATTTTCAATGATTTATGCACTCAGTTTTGTTCATTTTCCATTACTTTTGAGCTTAATTTGAACAATCCTTTCTTATTTTTGAAACTTTGAAGGAATCAGCAATGGCCGTTCCTAAATTGGTCAAGAAGATCGTTAAGAAGCGGGTTAAGCAGTTCAAGCGTCCGCAACATGACAGGCGGATGTGTGTCAAGGTATATACTTTCACATCCTTCATTTCTGCAACTTTTTAATCTTAGATTTAGCTTTTTTGATTGCTCAAATGTTTAAAATTTTGGAAGAAAAGTAAATTTTTGTTGGATTTCATTGCTAGTAGTCGTGAATTGCAGTGATAATGGTTTAATTTCTACAGTTTTTGGTATTATTGTTGACATGAAGTTTACATGAGCTGGTTGCATAAATGTAAGCTAAGTATACGGAATGTGATTTTTTGGCGTAAATGAGTGTATTGGTGATCTAGTTTATGAAAATAGTTGGATATAGAGGCGAAGGGTTTTTGACATGATGAATGTCGGTATCTGATGTTTTTGGGGTAAACTAGGTTACTTTATTGAGATTTTTGTTAAGTGTATTGAGAACGTGGTCAAATCTGCGTTTTGTATTCATATGAATTGACTTTGAACTCGGGCACCCTTTGGATTAATTTTATTCTGGTTTTAAACCTGCTGTCCTCTATGAATATAACGCCTTTATGCAGAATGTCGTTTATTCATTTTTGTACGAAATCATATTTGCAGTAAGCACTCACTTACCTGTCTTGGGGTGATTTGGAAGCACTTCACTTTTTAAAGTTGATGTTTTTTCAATTAAAGTTGGTTGGTTACTGGGTTGTAATTTTCATTTTTATATATAACCAAAATTCAGCTGTGTAATTGTGTGGTATTTCGTATTAGTTTGTTTGAACAGAGCGTCATAAAGGTGTAAAACAACCCGGTTAGTAGTTGGTACCAAGCTTACAATCAAATTCTGATGTAGAGTGTCATAGTTTAGCTCTTTAGCCTTTTCTAGTAGATTTGTTTTACTGTTTGTTATCTGCTTGATGCCTTGACCTATATGCATTTTTAGCTACGCTGGTGTATTACACAAGCTTGTAAAACTAGTAATTTAATGTACAATCTGGGCTATGCATTAATCACTGGGCTGCACACTATCCAGAGTCAAGATATTAAGTTTGTGGGTTGTCATGATTAGTTGTGGGCACATGTCTTTGATATGATATTCATGCTGTCAGGGTTGTAAGTTTTCTGCGAATGCTTGCCTCACAACTGTTGGGGCTAGCCTTTGAATAAAAGTATATTAGTTAATTTATAACACAGAAAAATATTTGGTGTTTAAATGTTATGTTCTAAAAAATACCCCCATGAGAACTGGTCTTTCTATGTCTTGGCCAGAAGGGTTGTGTAAAATTGATTTGTGTTTACTTCATGTTTTAATCAAGATGCTATGGGTGATTCTGATGCATTTTTATGTGTTATTTGAAACCTGAGCGGTCTATATGTTGGGCTTATAGAGTTCAATCTCCTAGAGGCATTGGGCTCAGTTGGGCTTATAGAGTTCAATCCCTAATGCTTGGGTAATTTTAGAGGCATTGTGTCACCTTCCACCTGTGAGGTTGGGGATCCTGTTCCCGTTCCCTTTCCCTGTATTATGTGGTTGTTTCCAGTCAAATATCTTTGGCTCCCCCTCTCTCCTATGAGGGGAGTGTGTGTTGAAAGACAATAGACAATAAATTTCCAAAATATAATGATTCTGCTGTCCTATTTGATTAAGAAGGGCTCCTCTCAAATTTGTAATTTCTCTGTTAATCTGAATGGTTGTCTCCTGCAGACTAACTGGCGTAGGCCAAAGGGTATTGATTCTCGAGTGAGGAGAAAGTTTAAGGGAGTTACTTTGATGCCCAACATTGGTTATGGTTCTGACAAAAAGACTAGGCACTTTCTTCCCAATGGCTTCAAGAAGTTTGTCGTCCACAATGTCAGCGATCTAGAACTTCTTATGATGCATAATCGGTAACAAATAGAATTCCCCCCTTCAACTTTCTTCCTCTCAATCCCTTTCACTGTGTACTAATTTATTGAGTGTGTTTTCTAATATCCAATTTTCTTTGCAAAATTTTAGAACCTACTGTGCTGAGATCGCTCACAACATCTCAACGAAGAAGAGAAAGGATATCGTCGAGCGTGCTGCACAGTTGGATGTCGTAGTCACTAACAAACTTGCTCGCTTGCGTAGCCAGGAAGACGAGTAATCCTTTTGCTGTCTGGGATAAATTTTGTTTTTAGATCAAAACTGGGGGAGACCTTTGTCGAATTCTAGCTTTAGTTGAACTACCCAGTATTTTTATTTGTCAAAATCTATGTTATACGATATCTGCTACTTTGATTTTCGTTCAGGCATTAGTGTTTTATCTTTTTTTCATCATTTGTTTCTCTCCAGTGTGTCCTCGGTCTTTGGCTTCTTACCTTGTTTGTTTGAAATCAGCAGAGTGCATACCACTTGACTAAAATCAAGTGATCTTATGCTAGAGAATTCGGGTCTATTATCTAGCATCTTCACTGGTTTGTTCTTGTGAGTGTGAACAAGATTTGGTCATCCCAGGCTAACTTTGTAAGGGACGATTTAAGCCAAGGTTTGTGGTATCTATTTGAGTTGTGGGTTAGCCTGTTGATCTTTGTGCGGAGGTAGCGTTTAGACCTAGTCAAAACTCTAGTAGATAAAACTAGGGGTGTTTTGTAGGCTAAACGGTTTTCTCTAACATCTTGTACAGTTGCACTAATGATACCATAAACAGATTTCTAATACTGTATCAGTTACACTAAATCGTAATCATGACATTTAATCTAGTTAAGTAATTA

mRNA sequence

ATGTGTGATCAAGAAGGGGTGTGCATAAAACAACATGGCTTCAATCTAGACGATGTCATTGATATTGAAAGAGTGAAGGAGGTGATTTCATTTCGGGTTAATATTCGTGTCCAGTTTGAACTGGTTCATGCTAAATATGGGTTATACCGGTTTAATTCGGTTTGTGTCGAGTTTGGTCTGTGTGCTGGTGGATTACGGTACACATCAACTGGTTTACCGTGGGGTTTCACCGAAAGTTTCTCCGTAAGCTTCCCTGTCAAAGGTTTCTCCGAATCAGCAATGGCCGTTCCTAAATTGGTCAAGAAGATCGTTAAGAAGCGGGTTAAGCAGTTCAAGCGTCCGCAACATGACAGGCGGATGTGTGTCAAGACTAACTGGCGTAGGCCAAAGGGTATTGATTCTCGAGTGAGGAGAAAGTTTAAGGGAGTTACTTTGATGCCCAACATTGGTTATGGTTCTGACAAAAAGACTAGGCACTTTCTTCCCAATGGCTTCAAGAAGTTTGTCGTCCACAATGTCAGCGATCTAGAACTTCTTATGATGCATAATCGAACCTACTGTGCTGAGATCGCTCACAACATCTCAACGAAGAAGAGAAAGGATATCGTCGAGCGTGCTGCACAGTTGGATGTCGTAGTCACTAACAAACTTGCTCGCTTGCGTAGCCAGGAAGACGAGTAATCCTTTTGCTGTCTGGGATAAATTTTGTTTTTAGATCAAAACTGGGGGAGACCTTTGTCGAATTCTAGCTTTAGTTGAACTACCCAGTATTTTTATTTGTCAAAATCTATGTTATACGATATCTGCTACTTTGATTTTCGTTCAGGCATTAGTGTTTTATCTTTTTTTCATCATTTGTTTCTCTCCAGTGTGTCCTCGGTCTTTGGCTTCTTACCTTGTTTGTTTGAAATCAGCAGAGTGCATACCACTTGACTAAAATCAAGTGATCTTATGCTAGAGAATTCGGGTCTATTATCTAGCATCTTCACTGGTTTGTTCTTGTGAGTGTGAACAAGATTTGGTCATCCCAGGCTAACTTTGTAAGGGACGATTTAAGCCAAGGTTTGTGGTATCTATTTGAGTTGTGGGTTAGCCTGTTGATCTTTGTGCGGAGGTAGCGTTTAGACCTAGTCAAAACTCTAGTAGATAAAACTAGGGGTGTTTTGTAGGCTAAACGGTTTTCTCTAACATCTTGTACAGTTGCACTAATGATACCATAAACAGATTTCTAATACTGTATCAGTTACACTAAATCGTAATCATGACATTTAATCTAGTTAAGTAATTA

Coding sequence (CDS)

ATGTGTGATCAAGAAGGGGTGTGCATAAAACAACATGGCTTCAATCTAGACGATGTCATTGATATTGAAAGAGTGAAGGAGGTGATTTCATTTCGGGTTAATATTCGTGTCCAGTTTGAACTGGTTCATGCTAAATATGGGTTATACCGGTTTAATTCGGTTTGTGTCGAGTTTGGTCTGTGTGCTGGTGGATTACGGTACACATCAACTGGTTTACCGTGGGGTTTCACCGAAAGTTTCTCCGTAAGCTTCCCTGTCAAAGGTTTCTCCGAATCAGCAATGGCCGTTCCTAAATTGGTCAAGAAGATCGTTAAGAAGCGGGTTAAGCAGTTCAAGCGTCCGCAACATGACAGGCGGATGTGTGTCAAGACTAACTGGCGTAGGCCAAAGGGTATTGATTCTCGAGTGAGGAGAAAGTTTAAGGGAGTTACTTTGATGCCCAACATTGGTTATGGTTCTGACAAAAAGACTAGGCACTTTCTTCCCAATGGCTTCAAGAAGTTTGTCGTCCACAATGTCAGCGATCTAGAACTTCTTATGATGCATAATCGAACCTACTGTGCTGAGATCGCTCACAACATCTCAACGAAGAAGAGAAAGGATATCGTCGAGCGTGCTGCACAGTTGGATGTCGTAGTCACTAACAAACTTGCTCGCTTGCGTAGCCAGGAAGACGAGTAA

Protein sequence

MCDQEGVCIKQHGFNLDDVIDIERVKEVISFRVNIRVQFELVHAKYGLYRFNSVCVEFGLCAGGLRYTSTGLPWGFTESFSVSFPVKGFSESAMAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVVTNKLARLRSQEDE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24414.1	Spo24414.1	mRNA

Homology

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BLAST of Spo24414.1 vs. NCBI nr
Match: gi|902228282|gb|KNA21043.1| (hypothetical protein SOVF_046840 [Spinacia oleracea])

HSP 1 Score: 264.2 bits (674), Expect = 2.000e-67
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
            NKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. NCBI nr
Match: gi|902213767|gb|KNA17331.1| (hypothetical protein SOVF_080870 [Spinacia oleracea])

HSP 1 Score: 261.2 bits (666), Expect = 1.700e-66
Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVPKL KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
            NKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. NCBI nr
Match: gi|902205155|gb|KNA15105.1| (hypothetical protein SOVF_101290, partial [Spinacia oleracea])

HSP 1 Score: 259.2 bits (661), Expect = 6.600e-66
Identity = 129/135 (95.56%), Postives = 133/135 (98.52%), Query Frame = 1

		  
Query: 92  SAMAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY 151
           SAMAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY
Sbjct: 27  SAMAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY 86

Query: 152 GSDKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDV 211
           GSDKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+
Sbjct: 87  GSDKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDI 146

Query: 212 VVTNKLARLRSQEDE 227
           VV NKLARLRSQEDE
Sbjct: 147 VVINKLARLRSQEDE 161

[Close]

BLAST of Spo24414.1 vs. NCBI nr
Match: gi|731319339|ref|XP_010670205.1| (PREDICTED: 60S ribosomal protein L32-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 246.9 bits (629), Expect = 3.400e-62
Identity = 122/133 (91.73%), Postives = 130/133 (97.74%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 214 TNKLARLRSQEDE 227
           TNKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133

[Close]

BLAST of Spo24414.1 vs. NCBI nr
Match: gi|695033485|ref|XP_009404229.1| (PREDICTED: 60S ribosomal protein L32-1-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 246.5 bits (628), Expect = 4.400e-62
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L K+IVKKRVKQFKRPQ DR++CVKTNWRRPKGIDSRVRRKFKG TLMPNIGYGS
Sbjct: 1   MAVPLLTKRIVKKRVKQFKRPQSDRKICVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKFVVHNV+DLELLMMHNRTYCAEIAHNISTKKRK IVERAAQLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVADLELLMMHNRTYCAEIAHNISTKKRKLIVERAAQLDIVV 120

Query: 214 TNKLARLRSQEDE 227
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046840 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.400e-67
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
            NKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCT8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080870 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.200e-66
Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVPKL KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
            NKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_101290 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.600e-66
Identity = 129/135 (95.56%), Postives = 133/135 (98.52%), Query Frame = 1

		  
Query: 92  SAMAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY 151
           SAMAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY
Sbjct: 27  SAMAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGY 86

Query: 152 GSDKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDV 211
           GSDKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+
Sbjct: 87  GSDKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDI 146

Query: 212 VVTNKLARLRSQEDE 227
           VV NKLARLRSQEDE
Sbjct: 147 VVINKLARLRSQEDE 161

[Close]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CYS5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039920 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.400e-62
Identity = 122/133 (91.73%), Postives = 130/133 (97.74%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRHFLPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 214 TNKLARLRSQEDE 227
           TNKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133

[Close]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Match: M0T6A2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.100e-62
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L K+IVKKRVKQFKRPQ DR++CVKTNWRRPKGIDSRVRRKFKG TLMPNIGYGS
Sbjct: 31  MAVPLLTKRIVKKRVKQFKRPQSDRKICVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 90

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKFVVHNV+DLELLMMHNRTYCAEIAHNISTKKRK IVERAAQLD+VV
Sbjct: 91  DKKTRHYLPNGFKKFVVHNVADLELLMMHNRTYCAEIAHNISTKKRKLIVERAAQLDIVV 150

Query: 214 TNKLARLRSQEDE 227
           TNKLARLRSQEDE
Sbjct: 151 TNKLARLRSQEDE 163

[Close]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 4.600e-59
Identity = 113/133 (84.96%), Postives = 123/133 (92.48%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKFVVHN S+LELLMMHNRTYCAEIAHN+STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-58
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKF+VHN S+LELLMMHNRTYCAEIAHNISTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 4.600e-43
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1

		  
Query: 97  PKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 156
           P +  KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 157 TRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVVTNK 216
           T+H LP+GF+KF+VHNV +LE+L+M N++YCAEIAHN+S+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 217 LARLRSQEDE 227
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 4.600e-43
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1

		  
Query: 97  PKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 156
           P +  KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 157 TRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVVTNK 216
           T+H LP+GF+KF+VHNV +LE+L+M N++YCAEIAHN+S+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 217 LARLRSQEDE 227
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=1 SV=3)

HSP 1 Score: 176.0 bits (445), Expect = 4.600e-43
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1

		  
Query: 97  PKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 156
           P +  KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 157 TRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVVTNK 216
           T+H LP+GF+KF+VHNV +LE+L+M N++YCAEIAHN+S+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 217 LARLRSQEDE 227
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Spo24414.1 vs. TAIR (Arabidopsis)
Match: AT4G18100.1 (Ribosomal protein L32e)

HSP 1 Score: 229.2 bits (583), Expect = 2.600e-60
Identity = 113/133 (84.96%), Postives = 123/133 (92.48%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKFVVHN S+LELLMMHNRTYCAEIAHN+STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]

BLAST of Spo24414.1 vs. TAIR (Arabidopsis)
Match: AT5G46430.1 (Ribosomal protein L32e)

HSP 1 Score: 227.3 bits (578), Expect = 9.800e-60
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1

		  
Query: 94  MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 153
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 154 DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 213
           DKKTRH+LPNGFKKF+VHN S+LELLMMHNRTYCAEIAHNISTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 214 TNKLARLRSQEDE 227
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

The following BLAST results are available for this feature:

BLAST of Spo24414.1 vs. NCBI nr
BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
BLAST of Spo24414.1 vs. TAIR (Arabidopsis)

BLAST of Spo24414.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902228282\|gb\|KNA21043.1\|	2.0e-67	99.2	hypothetical protein SOVF_0468...	[more]
gi\|902213767\|gb\|KNA17331.1\|	1.7e-66	97.7	hypothetical protein SOVF_0808...	[more]
gi\|902205155\|gb\|KNA15105.1\|	6.6e-66	95.5	hypothetical protein SOVF_1012...	[more]
gi\|731319339\|ref\|XP_010670205.1\|	3.4e-62	91.7	PREDICTED: 60S ribosomal prote...	[more]
gi\|695033485\|ref\|XP_009404229.1\|	4.4e-62	91.7	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo24414.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RNJ3_SPIOL	1.4e-67	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9RCT8_SPIOL	1.2e-66	97.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9R6H6_SPIOL	4.6e-66	95.5	Uncharacterized protein (Fragm...	[more]
A0A0J8CYS5_BETVU	2.4e-62	91.7	Uncharacterized protein OS=Bet...	[more]
M0T6A2_MUSAM	3.1e-62	91.7	Uncharacterized protein OS=Mus...	[more]

BLAST of Spo24414.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RL321_ARATH	4.6e-59	84.9	60S ribosomal protein L32-1 OS...	[more]
RL322_ARATH	1.7e-58	84.2	60S ribosomal protein L32-2 OS...	[more]
RL32_HUMAN	4.6e-43	66.1	60S ribosomal protein L32 OS=H...	[more]
RL32_RAT	4.6e-43	66.1	60S ribosomal protein L32 OS=R...	[more]
RL32_PIG	4.6e-43	66.1	60S ribosomal protein L32 OS=S...	[more]

BLAST of Spo24414.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT4G18100.1	2.6e-60	84.9	Ribosomal protein L32e	[more]
AT5G46430.1	9.8e-60	84.2	Ribosomal protein L32e	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001515	Ribosomal protein L32e	PRODOM	PD003823		coord: 113..215 score: 8.0
IPR001515	Ribosomal protein L32e	PFAM	PF01655	Ribosomal_L32e	coord: 109..215 score: 1.9
IPR001515	Ribosomal protein L32e	SMART	SM01393	Ribosomal_L32e_2	coord: 108..215 score: 1.1
IPR001515	Ribosomal protein L32e	unknown	SSF52042	Ribosomal protein L32e	coord: 91..224 score: 1.01
None	No IPR available	PANTHER	PTHR23413	60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N	coord: 93..226 score: 4.4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006508	proteolysis
biological_process	GO:0009790	embryo development
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0008033	tRNA processing
biological_process	GO:0016049	cell growth
biological_process	GO:0030243	cellulose metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0010431	seed maturation
biological_process	GO:0051301	cell division
biological_process	GO:0006412	translation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0051604	protein maturation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0008152	metabolic process
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0016571	histone methylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0009987	cellular process
biological_process	GO:0042221	response to chemical
biological_process	GO:0006950	response to stress
biological_process	GO:0006811	ion transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0022900	electron transport chain
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0009853	photorespiration
biological_process	GO:0015031	protein transport
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0051607	defense response to virus
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0048481	plant ovule development
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0050826	response to freezing
biological_process	GO:0035246	peptidyl-arginine N-methylation
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0010220	positive regulation of vernalization response
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0009845	seed germination
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process	GO:0019915	lipid storage
biological_process	GO:0006434	seryl-tRNA aminoacylation
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0048449	floral organ formation
biological_process	GO:0034969	histone arginine methylation
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0006567	threonine catabolic process
biological_process	GO:0006869	lipid transport
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005874	microtubule
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0010319	stromule
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0045259	proton-transporting ATP synthase complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008266	poly(U) RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004828	serine-tRNA ligase activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0046029	mannitol dehydrogenase activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0046914	transition metal ion binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004055	argininosuccinate synthase activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003852	2-isopropylmalate synthase activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0008469	histone-arginine N-methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0004743	pyruvate kinase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17110	0.85	Barchart \| Table
Spo26636	0.85	Barchart \| Table
Spo17929	0.83	Barchart \| Table
Spo16627	0.81	Barchart \| Table
Spo04454	0.80	Barchart \| Table
Spo00170	0.80	Barchart \| Table
Spo05547	0.80	Barchart \| Table
Spo25289	0.79	Barchart \| Table
Spo07920	0.79	Barchart \| Table
Spo13731	0.79	Barchart \| Table
Spo20161	0.78	Barchart \| Table
Spo21768	0.77	Barchart \| Table
Spo08589	0.77	Barchart \| Table
Spo08768	0.76	Barchart \| Table
Spo00780	0.76	Barchart \| Table
Spo07599	0.76	Barchart \| Table
Spo19401	0.76	Barchart \| Table
Spo06501	0.76	Barchart \| Table
Spo25523	0.76	Barchart \| Table
Spo14353	0.75	Barchart \| Table
Spo16097	0.74	Barchart \| Table
Spo00568	0.74	Barchart \| Table
Spo12598	0.74	Barchart \| Table
Spo22740	0.74	Barchart \| Table
Spo20968	0.74	Barchart \| Table
Spo05833	0.73	Barchart \| Table
Spo02189	0.73	Barchart \| Table
Spo22410	0.73	Barchart \| Table
Spo11026	0.73	Barchart \| Table
Spo09714	0.73	Barchart \| Table
Spo05276	0.73	Barchart \| Table
Spo25915	0.73	Barchart \| Table
Spo24703	0.73	Barchart \| Table
Spo18304	0.73	Barchart \| Table
Spo13707	0.73	Barchart \| Table
Spo10705	0.72	Barchart \| Table
Spo03105	0.72	Barchart \| Table
Spo18103	0.72	Barchart \| Table
Spo09803	0.72	Barchart \| Table
Spo10624	0.72	Barchart \| Table
Spo19500	0.71	Barchart \| Table
Spo20163	0.71	Barchart \| Table
Spo21531	0.71	Barchart \| Table
Spo15517	0.71	Barchart \| Table
Spo00566	0.71	Barchart \| Table
Spo15363	0.71	Barchart \| Table
Spo02098	0.71	Barchart \| Table
Spo03708	0.71	Barchart \| Table
Spo26803	0.71	Barchart \| Table
Spo08488	0.71	Barchart \| Table
Spo03231	0.70	Barchart \| Table
Spo04453	0.70	Barchart \| Table
Spo07402	0.70	Barchart \| Table
Spo07928	0.70	Barchart \| Table
Spo12291	0.70	Barchart \| Table
Spo14984	0.70	Barchart \| Table
Spo15604	0.70	Barchart \| Table
Spo16351	0.70	Barchart \| Table
Spo19325	0.70	Barchart \| Table
Spo21475	0.70	Barchart \| Table
Spo25954	0.70	Barchart \| Table
Spo28098	0.70	Barchart \| Table
Spo01970	0.69	Barchart \| Table
Spo25669	0.69	Barchart \| Table
Spo07955	0.69	Barchart \| Table
Spo06444	0.69	Barchart \| Table
Spo07432	0.69	Barchart \| Table
Spo26851	0.69	Barchart \| Table
Spo24475	0.69	Barchart \| Table
Spo04381	0.68	Barchart \| Table
Spo23832	0.68	Barchart \| Table
Spo12054	0.68	Barchart \| Table
Spo01990	0.68	Barchart \| Table
Spo07223	0.68	Barchart \| Table
Spo09353	0.68	Barchart \| Table
Spo18647	0.68	Barchart \| Table
Spo15150	0.68	Barchart \| Table
Spo08451	0.68	Barchart \| Table
Spo21027	0.68	Barchart \| Table
Spo04531	0.68	Barchart \| Table
Spo22326	0.68	Barchart \| Table
Spo12071	0.67	Barchart \| Table
Spo18499	0.67	Barchart \| Table
Spo03675	0.67	Barchart \| Table
Spo05783	0.67	Barchart \| Table
Spo22394	0.67	Barchart \| Table
Spo02706	0.67	Barchart \| Table
Spo12809	0.67	Barchart \| Table
Spo25615	0.67	Barchart \| Table
Spo12394	0.67	Barchart \| Table
Spo02380	0.67	Barchart \| Table
Spo17135	0.67	Barchart \| Table
Spo12304	0.67	Barchart \| Table
Spo23345	0.67	Barchart \| Table
Spo26038	0.67	Barchart \| Table
Spo15794	0.67	Barchart \| Table
Spo27223	0.66	Barchart \| Table
Spo10322	0.66	Barchart \| Table
Spo14381	0.66	Barchart \| Table
Spo09802	0.66	Barchart \| Table
Spo09414	0.66	Barchart \| Table
Spo26318	0.66	Barchart \| Table
Spo01695	0.66	Barchart \| Table
Spo17017	0.66	Barchart \| Table
Spo06802	0.66	Barchart \| Table
Spo18434	0.66	Barchart \| Table
Spo19207	0.66	Barchart \| Table
Spo00702	0.66	Barchart \| Table
Spo06185	0.66	Barchart \| Table
Spo06168	0.66	Barchart \| Table
Spo02278	0.66	Barchart \| Table
Spo14159	0.66	Barchart \| Table
Spo13279	0.66	Barchart \| Table
Spo06172	0.65	Barchart \| Table
Spo19439	0.65	Barchart \| Table
Spo11665	0.65	Barchart \| Table
Spo17124	0.65	Barchart \| Table
Spo25205	0.65	Barchart \| Table