Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAAGGGAGACGAATCTAAGGTTCATTTCTTCTAAGCAAGGGGATTTAATACATCTTCCTTCCCTGTTTTCCCAGAAGCTCAATTTCAAACCGTGAATACGGAGATTTTTAAATCCATCTCAAACCTAAAGAAACTTCTGGCCTAGCTGAGTGGATAACTTAATTTCCTACATCATGTATCACTGGCTTCGAGCTATTCTTTGATCAGTACTTTTTGTATTTTTAAAGCCACATTTTTCCAAATTTATCTTCGACATTTCCGGTTACAAAATTTAGCATCTTCGTTGAACAACTCCATCGCCAAGTTCTTCGACTTTGCCGTACCGATCTGAATCCAAGCCATGTCACGAATTACGATGTCAACACTCCTCACGTTGTCGTCTCCCTCATCGTCATTTTCGCGGTGGATAGTGTGGTTGTGTCCTTCATCCCAACCATCGATTTCGACTCGGAGAAAGTCGGATTCATCCGCCGGCGAAGGGTCGGTGGAGTTCAGATGTCTAGGTGGGGCGATGTTGAGTAGGTGGAGGAGCGTCGTCTTCTTGCGCTACCAGAGCAGTATGAATGGTAATATTTTCCTTTTGTTAGTTCTTTCTAGGTTTATTCCTAAATTTGTGATTATATAATTTTTTGGATGTATCTTGGTGGAATTATCTACAATCTATGATTTTAAAACTTGTAGTTAACTGATAAATCTGTTTCATTTTTTTGCGGGTATCACGAATTCTTTGAGTTAGGGATTTTAAGAACTTTTTAGATTTGTCCCGTTAGAACTAATTTTAATAGATTGGCATATTTTTAAAGAAATTTAATCCATTTGAAAACAGAATGAACACATTGATTTAGAGTTAGGGGTTACATATTTTTATTTTTATTATCTACTCTTCTGGGTGCATACTGTACATTTCTCAACTACTAGTTGATACTCTATTTCGAACTAATTATGCTTCAGTGAGTATAGTTTTGTTCGTATTTCCAATAAATGGACATGTTATTGGAAATATTCTAGTTACATGTTACAACTGTTAATTATTGCTCTTTCCATAGTAAGCCCTAAATGCTCGACTGTTACAATTTTAATTGAGATATTAGTTCGATTTTTTAAGACTTGATAATTAAATGTTTGGAAAAATCAGGCAAATGTGTATATACTTCCATCGTTTTTTTACTTGCACCATTTTGGTTGGTCACAAAAGATTAAGAAAAAATTATAACCATCAAAATTGTCCATATGAGAACAAATAAAAGAGAGGAAAATTTTAGGTAACTAATGGTAAATGTAAAATTTGAGTAAGGGCAAAGTGGGTATTTAGTATGTGAACACACCAAAAACCTTGTGAAAACATACCATAAAGGAAAATGGTGTAACTAATATTCAACTTCCATAAAAGGATAATAGTACAAGTAAAAAGAACGGAGGAAGTTTTTTTTTTTAATTTTAATTTAGGTTTGGAAGATTTTATAGTTCATCACGCTGATGGTTTCCTTGCTTTACTACTTTTTATGTGAACAAATATCCCCCCCCCCCCCCCCCCCCCNCCCCTCTCCCAATTAAGGTGTAATTACTGAAAAATGTGGTGTTTATTATGCTCCAAGATGATGTAAAATACTATACAATTATGTGTAATTACTTCCTACATTTTGTCTGGACCATTTTATTTTTGTAGCTTGTTTTCTGGAGGTCATGATGAGGAATATATTTGATAAGATTTCACTTGGTGTTTGTGTATGAAATGTTCCACCTTGATTTCTCCCCCTAAAAGAATATAAAGATGGATTAAATAAGGTGAAAAAAGTCATGTCGATCTTTTAGTTCTGAATGCGATTTCTTTACAATTTTATGATTCTATCGTTTGGATTTGTGTTTCTAATTGCACTTAGAAAATGTGGTGGTTAGTAGGAATATTCACTCGACCGTTACTTGTGTTTCTATCTTTAAGTCTAAGTCGTTTTCCCATTGCATTTACTTGTTCAGTTGTTCCTGAATCTGCAGGGAGCCTTTGAGTCAAGGATCTGTTTCATTTTTGTGCAGGTATCACAAATTCTCGCAAACATCTCATTTTAATCATTAGGAAGTTTGGATTATTCTAGTTCTGTTTTTTTTTTTTTTTTTGTTATTGAGTAATTGTTGTATGTGTAGTTGCACTTGCCAGTTCCATATTTTGGCCCGTTCGGTAACAATGTCAGTGTCCAGCTTTTTTTTTTTTTTTGGACAGGAGTTTCCAGTTTTTTGGTTTTATAAGTCATATGATTTAGATTGAATAATGAACTAAAAAATAGTCATACCTATTGTAATCATGTTAATTTTGAAAACTGACAACAAAAATCCGGAAACTACTTTTTGTGGTTTTCATATTGAACAGAAAACTGGAAACAAAAAACGATACCGGGCGAGAATTTTGGGAAAAGTAACATAATTAAATTGTGCAAACTCATAATGAAAAGTTATTGAGTAAGATTCCTAGAGCGCCTTTGAAAGACAAGAAGGCTGGTGGTTTTGATTTTGCATTCATTTTGTTTAGTTTTGTGAAGAAGTATTATTGCCTCCCTTTTAGCTTCTAACTTGGAGAAAAAGTTTAGCCACAAAATAATTAGTTTGTTAGATATGGATTAACTATCTTCCCCTTGATTCATACGGAGTACTTGTTTTGTTTTATAACTGAGAGAGAAGAGGAATGGAACTATTGGAAAGATTACGCCGGAGAATATTTTAGATTCAATTCCTTATAGATTTATTAAAAAGATAGATCCTAGAAATTAGATTACAATTGTTATTTGAATCATAGTTTTGCTTAGGAATATGCTATCGTTTTTTGTTGTGAAAATTCTATGGCTGAATATTTCACTAATTATAATGTTTTTGTAGGTATCTCTTGTATGTAATGAAAGTGGGCACTCTAACAAAAGATTGCTTGGAGCTTGTTCTGGATTTGCTTATGTCGGCTATAAAAGCCAGGGTGAAGGTAGGAAGTTGAGACATGAGAGTTGGACTTGGGGACCTGCACCTTTTGTTTTGGAGCTTGTTTTGGATTTGCTTATGTCGCCAGGGTGCAGGTCCTAAAGGGTGAAGGAAAAAGGTGCAGGTTCCAAAGGGTGAAAAACTCAAAAAGTTGAGTCTACAAACATTAGCTTACCTCTAATAAAAACTATTCTATCTATCTTCTTACTTTAATTTATGCCTTCATATCTTAGGAAATTAAAACATGGATGACATAAACATGGGTAAATGGGTGGCAGTGTGTTTGTCATTTTCCACTTACAACAGAAACATGCATTCTAACTTCATGATTCAATTAACTCACTCTTCATGCATGAAGTAAGTTTCTCACTAGCAAGCAGTTGAATCACGTAATTTAGGTAATTCATTACATCCTATTATTTCACTTATAGTGGTTTAATTAGCACTATAAATATTCGGAAAACTTGTGTGTAAAAAAACAAAACAAAACATAATTTACATAGGATAAAATTAGCCTTGATTAGCTCATCATAATTTACATATAGCAATTTCAAGCAATAATGGAGGGAGTCTCACACAAGCTTTTTGCTCCAATTGTTTTGGTTGCCCTAATCTTGGTTTTGAATACTACAACAGGTTAATTAATTATTTTTTTGAGTTTCAAAATTAATCTAATTTTAATTAGCATATGTGATTTTGGAATTTTTTTTTTTTTTTATCCTTAATTCTTTTGTCTACTACTCCGTATTGCAGTAAGTAGTGAAGAAATGCCAAAGATGTACGTAATGGAAGAAGTGACAATGGTCGAACCAAACACAAACATGGTGCATAATAATGGGAATATTCATAAACCAAAGATGATGATAATGCAATTTGTTGATCAACAAAATAATAAGGAAGCTAATTCTATGGCGGCAACAACCACGTCGACTACGTCGTCGTCGACTGAGTCTGGTCTGAGATGCGCCGATGAGGGCGAATACTGTAACACCCTCTTTGGAAATAGTTGTTGCCCTGGTATTGATTGTGTTCAAGGACCTTTTGTAGGTGGTAGGTGCCATAAATGGTAACTAATTAAGAGCATTATATATATAGCATTATATATGCTTAGTTTAGTAGACAAATCAACGAAGTTGAACATGTAAATTAAATAACGTGCACCATATAAGATGTGCATGTCTCTGTACGTGTGTAAGTTTAATAATAATAATATCATGAAAAAAATAAAGACTAGCTTTCATGAGAAGTCATGAATCATTTCATAT TTGAAAGGGAGACGAATCTAAGGTTCATTTCTTCTAAGCAAGGGGATTTAATACATCTTCCTTCCCTGTTTTCCCAGAAGCTCAATTTCAAACCGTGAATACGGAGATTTTTAAATCCATCTCAAACCTAAAGAAACTTCTGGCCTAGCTGAGTGGATAACTTAATTTCCTACATCATGTATCACTGGCTTCGAGCTATTCTTTGATCAGTACTTTTTGTATTTTTAAAGCCACATTTTTCCAAATTTATCTTCGACATTTCCGGTTACAAAATTTAGCATCTTCGTTGAACAACTCCATCGCCAAGTTCTTCGACTTTGCCGTACCGATCTGAATCCAAGCCATGTCACGAATTACGATGTCAACACTCCTCACGTTGTCGTCTCCCTCATCGTCATTTTCGCGGTGGATAGTGTGGTTGTGTCCTTCATCCCAACCATCGATTTCGACTCGGAGAAAGTCGGATTCATCCGCCGGCGAAGGGTCGGTGGAGTTCAGATGTCTAGGTGGGGCGATGTTGAGTAGGTGGAGGAGCGTCGTCTTCTTGCGCTACCAGAGCAGTATGAATGGTATCTCTTGTATGTAATGAAAGTGGGCACTCTAACAAAAGATTGCTTGGAGCTTGTTCTGGATTTGCTTATGTCGGCTATAAAAGCCAGGGTGAAGTAAGTAGTGAAGAAATGCCAAAGATGTACGTAATGGAAGAAGTGACAATGGTCGAACCAAACACAAACATGGTGCATAATAATGGGAATATTCATAAACCAAAGATGATGATAATGCAATTTGTTGATCAACAAAATAATAAGGAAGCTAATTCTATGGCGGCAACAACCACGTCGACTACGTCGTCGTCGACTGAGTCTGGTCTGAGATGCGCCGATGAGGGCGAATACTGTAACACCCTCTTTGGAAATAGTTGTTGCCCTGGTATTGATTGTGTTCAAGGACCTTTTGTAGGTGGTAGGTGCCATAAATGGTAACTAATTAAGAGCATTATATATATAGCATTATATATGCTTAGTTTAGTAGACAAATCAACGAAGTTGAACATGTAAATTAAATAACGTGCACCATATAAGATGTGCATGTCTCTGTACGTGTGTAAGTTTAATAATAATAATATCATGAAAAAAATAAAGACTAGCTTTCATGAGAAGTCATGAATCATTTCATAT ATGGTATCTCTTGTATGTAATGAAAGTGGGCACTCTAACAAAAGATTGCTTGGAGCTTGTTCTGGATTTGCTTATGTCGGCTATAAAAGCCAGGGTGAAGTAAGTAGTGAAGAAATGCCAAAGATGTACGTAATGGAAGAAGTGACAATGGTCGAACCAAACACAAACATGGTGCATAATAATGGGAATATTCATAAACCAAAGATGATGATAATGCAATTTGTTGATCAACAAAATAATAAGGAAGCTAATTCTATGGCGGCAACAACCACGTCGACTACGTCGTCGTCGACTGAGTCTGGTCTGAGATGCGCCGATGAGGGCGAATACTGTAACACCCTCTTTGGAAATAGTTGTTGCCCTGGTATTGATTGTGTTCAAGGACCTTTTGTAGGTGGTAGGTGCCATAAATGGTAA MVSLVCNESGHSNKRLLGACSGFAYVGYKSQGEVSSEEMPKMYVMEEVTMVEPNTNMVHNNGNIHKPKMMIMQFVDQQNNKEANSMAATTTSTTSSSTESGLRCADEGEYCNTLFGNSCCPGIDCVQGPFVGGRCHKW Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24496.1 vs. NCBI nr
Match: gi|902141321|gb|KNA04694.1| (hypothetical protein SOVF_197300 [Spinacia oleracea]) HSP 1 Score: 285.0 bits (728), Expect = 6.800e-74 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
BLAST of Spo24496.1 vs. NCBI nr
Match: gi|902162398|gb|KNA06684.1| (hypothetical protein SOVF_178740 [Spinacia oleracea]) HSP 1 Score: 204.1 bits (518), Expect = 1.500e-49 Identity = 100/105 (95.24%), Postives = 100/105 (95.24%), Query Frame = 1
BLAST of Spo24496.1 vs. NCBI nr
Match: gi|731359140|ref|XP_010691125.1| (PREDICTED: uncharacterized protein LOC104904545 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 84.7 bits (208), Expect = 1.400e-13 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 1
BLAST of Spo24496.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBP5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_197300 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 4.800e-74 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
BLAST of Spo24496.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHH5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_178740 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.100e-49 Identity = 100/105 (95.24%), Postives = 100/105 (95.24%), Query Frame = 1
BLAST of Spo24496.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BKR8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g219440 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.400e-14 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24496.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 3
BLAST of Spo24496.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 3
BLAST of Spo24496.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo24496.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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