Spo24509 (gene) | SpinachBase

Overview


Name	Spo24509
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing protein, putative
Location	SpoScf_00202 : 188157 .. 191927 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGGTTTTCAGCTTCGTATCTAGAAATACCAGCTTCTCTGTACGTATGGTACTGAGACTTTGAAATGGCCATGCTTTAAGGAGAAGACAAAGTGGCAGATTGGTTTGCCATGTTTGACCATGATATAAACTGAGGTGTTCCAAATGTTTTAGACTGATTACCACATATTAGGCTATTAGTTATGACTTATGACTGGAAAAAGAGTGACCTGATGATTTGAAAAACAAAATATACTCTCTTAAGTACATATACATGCATGCAAAAACGCACATACGAACTATGCACAGAAAGCAGAGAAAAAAAAAGGACAGATAAGCTTCAAAGACAAGTGGACGCAGAAGAAATCAACTAACCAGATCACGGAACTTCAGAATGTAGAACATCTCAAGATATCGACGAGTCTCCCTTCTCTCTAGTTTAGAGACATATTTCCAAAAACCGTAAACTCCCGCTAATGTCATCAACCTCTCAGAATACTTTAACCAGGTGTACCTGCAATTTTAAAACATAAACTAAGTAAGCAAGTTAAGCATAGGATTTTTTGCCAAAAAGGACCTTTTATAAGCATTTTTTTGCGAGAAAGGACCTTTTATGTCAAAATTGGTGAAATGGGACCTAAAATACAATATTTTTTGTTAAGTGGGACCTTTGCCCGGATTCTTGGAGTCAACCCAAGTTTCTGGCGTTGACTTCGACACGTGGCAGCCGGAAACTGCCACGTGTCAATATCCTTATTTTAAAAAAAAAAAAATTATTTTTTTTCCCAAAAATCATCGTTTTACTGAAACAGTTTTACCCAAAAAAAAAATCGATTCTCGATTCTCTTCTCTCTCCTCTGCTCCTTCAACTCGACGCCATTGTTGAAGATTCAAGGTTGAAGGAAAGTGCTTCTTCACTCAAATTGCTTGCCACGAATTGTTACTCAGGCCTCCACGAATCAGGTATGCTATTTCCCCCCCTCAAAATCCTCTTCAATTGTTGTAATTTTGGGTCGAAAAAATTAGGGTTCTTCCCAAATTTGGGGATTTTGTAATTCGTTGTGTATTTGTGTTTTAGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTGTTTACAAGAAGATGATTCAGAGTGGAATTGAGCCAACAATTCATACATATATTATGATGATGATGAAATCTTACTTTGATTTTTTTTTTTTTGTGGGTAAAAATGTTTCAGTAAATGATGTTGGTTTTGTAGGGAATTTTTGGGAAAATTTTTATTTTTATTTTTTTTTATTTTTATTTTTTAAATAAGGATATTGACACGTGGCAGTTTCCGGCTGCCACGTGTCGAAGTCAACGCCAGAAACTTGGGTTGACTCCAAGAATCCGGGCAAAGGTCCCACTTAACAAAAAATATTGTATTTTAGGTCCCATTTCACCAATTTTGACATAAAAGGTCCTTTCTCGCAAAAAAATGCTTATAAAAGGTCCTTTTTGGCAAAAAATCCTTAAGCATAACCTGCCTCTAAGTGCTACGCGTGCATTCCAAATCTTTCTGCACTGATACTAACCTTTCTTTGATCCTTTGCAACCCCCCGTCAGAGATTTTACTCCAGTAGCTCGGATCCTCTTTGGACTTGGTAAAAAAATCAGCCATCTTTTCTGCAGCCTGATCAGCATGATATGGATCAATATGAAATCCTGATATTCCATCTTCTATAATCTCAGCCGGACCACCATGGCATGTAGCAAATGTGGGTAGGCCACAAGTCATTGCTTCAACAACTGTTAGCCCAAATGCTTCATAAAATGCAGGCTGCAAGTCATAAATATAGCATCCTATGAGATTTGTTAACAAGGACTTATGTTATGACTTTGATTAGTGAAAGGGCTCTTGAGCTGTCTGAGCAACTCTTTTGGGAAATTAAATTTAAAAGTTCATATTGCAACTTATAACCCCGTTTTTCATACAATTCTGTGCGCCTGTCATTTTAAATACTTATTCTCCTTCATTTGAGAAATGTGGAAAAAAAGTGTTCAGAATTTCTTTTTCACTCAATGTTTTTCCTCTACTTATTATTCTGGATAGACAAGATAATTTCAGGTTTAGCTAAACATTAGACTCTGGATTTAGGAAGGATGAAAACATAGATAAAATTAGAGCATACCTGCACAAAAATACCTCCTTTGTCACAGATGTACCGGTAAAGTTCACCATTTCTCACTCTGTTCGTTTGAGAAGCTATCCACCTAAACTGTCCTTTCAAATTGTACTGCTTGATAAGGTTGTGCATCTTTTCAATTTCAGCAATCTCTTCCCTGTCATTTGACTTTTTTGCATCATTGTACCCAGCAACCACAACCAGATTTGACAGTTCCCTGAGTTTAGCATTCTTTGCATAGCACTCAACCAGTCCTGTTATGTTCTTCACATGGTCTAGCCTTGCCATGGAAAATATTATAGGCTTTGCGGGATCATCTAGTATACCACTGTATCGATGAAAATTCTAGTTAATAAAAATTGCATACCATGCAGAAAGACATGCTAAGTATCATAATGTACAGAGTAATATTTTTTATTTTATTTTTGAGATTGTCTTTGTAGTTGAATATGATCACAGCCTCACAGGTCCATATAATTTTCTACTTTTCAACATGACACAAGTGTTTTTGTTCAAAGAGAGAAAGCAGTTATTTTGTATGATACTGTATGCTAAGAGATGAACAAGAAAAATGGAGATTTATGTCCCAGTCATATAAATGATAGTTCTATGCGATTGGTGCAAGATCAATAACGAGCAAGAGGTTACATGTGTTCTTCGTTCTGTTCTGGATTGAATAAGAGCTCCTCTATGAAGCTATGAAGTGCAGTGAGCCGCTTCCCCTTCTCCGAAAATGGGAAATAGATGGACAAATCAGCCCCGGGTGAGACAATATTAAACTTGGGGTCAAAGACATCAATCCCATGAACCACCCGATACAGCCCTGGCAAAGTGAAAGCCGTATGACTTTCATATTGACCAACAGTATTTTTCCTGAAAGAAACATTATTGTTATCCAGGTGATTTAAAAAGTATAGTAGCATAATTGCTGAGAAAACGCCTTTTTGGTAGAGTTAAGTAGACGTTGTGATAAAAAAAAGGCTAAAAGTTGCTCTGGCGCAGCCTTAAAAGTTAAAATGAATATGGTTCATTTAACCAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

mRNA sequence

ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTTTGAATATGATCACAGCCTCACAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

Coding sequence (CDS)

ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTTTGAATATGATCACAGCCTCACAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

Protein sequence

MPCKLLLEESGIADIAIDNVPSKSENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRLNMITASQEFGATQGLKYQTSQNSIFQTPNSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24509.1	Spo24509.1	mRNA

Homology

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BLAST of Spo24509.1 vs. NCBI nr
Match: gi|902240620|gb|KNA26028.1| (hypothetical protein SOVF_000970 [Spinacia oleracea])

HSP 1 Score: 319.3 bits (817), Expect = 5.200e-84
Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D + ++ + N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDVVTHNIMLDG
Sbjct: 400 AQVLYDRLKNRFTPNTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDG 459

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LLKVNKKSDAIKLFEVMKVKGP PNVRTYTILIRDLCKHSKLNE VAYFD MTSSGCNPD
Sbjct: 460 LLKVNKKSDAIKLFEVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPD 519

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FGNLKKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVR+
Sbjct: 520 AAVYTCLITGFGNLKKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577

[Close]

BLAST of Spo24509.1 vs. NCBI nr
Match: gi|731336635|ref|XP_010679366.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 290.4 bits (742), Expect = 2.600e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592

[Close]

BLAST of Spo24509.1 vs. NCBI nr
Match: gi|731336637|ref|XP_010679367.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 290.4 bits (742), Expect = 2.600e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 386 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 445

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 446 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 505

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 506 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 549

[Close]

BLAST of Spo24509.1 vs. NCBI nr
Match: gi|720008129|ref|XP_010258534.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 260.0 bits (663), Expect = 3.800e-66
Identity = 120/164 (73.17%), Postives = 140/164 (85.37%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T SVLL+GWC++KNLMEAG++WNEMID+GL PD+V HNIML+GLL+  K+S+AIKLF
Sbjct: 415 NLQTYSVLLAGWCKVKNLMEAGKVWNEMIDKGLKPDIVAHNIMLEGLLRGKKRSEAIKLF 474

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTILIRDLCK SK+ + V YFD M   GC PD AVYTCLI  FGN 
Sbjct: 475 EIMKAKGPSPNVRSYTILIRDLCKGSKMEQAVEYFDEMLDCGCQPDPAVYTCLIVGFGNQ 534

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+GLLKE+KEKG PPDG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 535 KKMDKVYGLLKEMKEKGCPPDGRTYNALIKLMTNRQMPDDAVRV 578

[Close]

BLAST of Spo24509.1 vs. NCBI nr
Match: gi|225447826|ref|XP_002268129.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 258.5 bits (659), Expect = 1.100e-65
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534

[Close]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2T3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_000970 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.600e-84
Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D + ++ + N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDVVTHNIMLDG
Sbjct: 400 AQVLYDRLKNRFTPNTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDG 459

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LLKVNKKSDAIKLFEVMKVKGP PNVRTYTILIRDLCKHSKLNE VAYFD MTSSGCNPD
Sbjct: 460 LLKVNKKSDAIKLFEVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPD 519

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FGNLKKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVR+
Sbjct: 520 AAVYTCLITGFGNLKKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577

[Close]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121700 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.800e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592

[Close]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: F6H1T3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00750 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.600e-66
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 77  NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 136

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 137 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 196

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 197 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 240

[Close]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A5AVH1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028672 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.600e-66
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534

[Close]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: B9I9J7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11650g PE=4 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 2.200e-65
Identity = 118/164 (71.95%), Postives = 141/164 (85.98%), Query Frame = 1

		  
Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNLMEAG IWNEM+D+G  PD+VTHNIML+GLL+  K+SDAIK F
Sbjct: 314 NLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFF 373

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP P+VR+YTILIRDLCK +K+ E V YF  M  SGC+PDAAVYTCL+T +GN 
Sbjct: 374 EVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNH 433

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           K+MDMV+ LLKE+KEKG PPDG+ YNALIKLMT++RMPDDAVR+
Sbjct: 434 KRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRI 477

[Close]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.600e-61
Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460

[Close]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.100e-60
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459

[Close]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.100e-60
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460

[Close]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.700e-21
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1

		  
Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T S+LL GW +  NL +A E++ EMID G +PD+VT++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 89  KVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 148
                 P    Y++L+      ++L E V  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 149 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDA 187
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396

[Close]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.400e-20
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1

		  
Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T +VL  GWCR+++  +A ++  EMI+ G  P+  T+   +D   +     +A  LF+ M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329

Query: 89  KVKGPP---PNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 148
             KG     P  +T+ ++I  L K+ K  E       M S+GC PD + Y  +I      
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389

Query: 149 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           +K+D  +  L E+  KGYPPD   YN  ++++   R  D+A++L
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433

[Close]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 9.200e-63
Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460

[Close]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.700e-61
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459

[Close]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.700e-61
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1

		  
Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460

[Close]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.100e-22
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1

		  
Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T S+LL GW +  NL +A E++ EMID G +PD+VT++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 89  KVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 148
                 P    Y++L+      ++L E V  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 149 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDA 187
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396

[Close]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT1G73400.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.300e-21
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1

		  
Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T +VL  GWCR+++  +A ++  EMI+ G  P+  T+   +D   +     +A  LF+ M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329

Query: 89  KVKGPP---PNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 148
             KG     P  +T+ ++I  L K+ K  E       M S+GC PD + Y  +I      
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389

Query: 149 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           +K+D  +  L E+  KGYPPD   YN  ++++   R  D+A++L
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433

The following BLAST results are available for this feature:

BLAST of Spo24509.1 vs. NCBI nr
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)

BLAST of Spo24509.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902240620\|gb\|KNA26028.1\|	5.2e-84	87.6	hypothetical protein SOVF_0009...	[more]
gi\|731336635\|ref\|XP_010679366.1\|	2.6e-75	82.3	PREDICTED: pentatricopeptide r...	[more]
gi\|731336637\|ref\|XP_010679367.1\|	2.6e-75	82.3	PREDICTED: pentatricopeptide r...	[more]
gi\|720008129\|ref\|XP_010258534.1\|	3.8e-66	73.1	PREDICTED: pentatricopeptide r...	[more]
gi\|225447826\|ref\|XP_002268129.1\|	1.1e-65	73.7	PREDICTED: pentatricopeptide r...	[more]

BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9S2T3_SPIOL	3.6e-84	87.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CCN2_BETVU	1.8e-75	82.3	Uncharacterized protein OS=Bet...	[more]
F6H1T3_VITVI	7.6e-66	73.7	Putative uncharacterized prote...	[more]
A5AVH1_VITVI	7.6e-66	73.7	Putative uncharacterized prote...	[more]
B9I9J7_POPTR	2.2e-65	71.9	Uncharacterized protein (Fragm...	[more]

BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
PP293_ARATH	1.6e-61	61.2	Pentatricopeptide repeat-conta...	[more]
PP382_ARATH	3.1e-60	60.1	Pentatricopeptide repeat-conta...	[more]
PP294_ARATH	3.1e-60	60.1	Pentatricopeptide repeat-conta...	[more]
PP129_ARATH	3.7e-21	34.8	Pentatricopeptide repeat-conta...	[more]
PP117_ARATH	2.4e-20	31.7	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G62470.1	9.2e-63	61.2	Pentatricopeptide repeat (PPR)...	[more]
AT5G14820.1	1.7e-61	60.1	Pentatricopeptide repeat (PPR)...	[more]
AT3G62540.1	1.7e-61	60.1	Pentatricopeptide repeat (PPR)...	[more]
AT1G77360.1	2.1e-22	34.8	Tetratricopeptide repeat (TPR)...	[more]
AT1G73400.1	1.3e-21	31.7	Pentatricopeptide repeat (PPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 32..58 score: 0.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 60..109 score: 8.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 121..180 score: 4.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 31..62 score: 1.5E-5coord: 99..132 score: 7.1E-7coord: 63..97 score: 2.9E-5coord: 134..166 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 166..202 score: 5.799coord: 96..130 score: 11.071coord: 131..165 score: 9.821coord: 26..60 score: 10.106coord: 61..95 score: 10
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 26..189 score: 6.7
None	No IPR available	PANTHER	PTHR24015:SF429	SUBFAMILY NOT NAMED	coord: 26..189 score: 6.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043631	RNA polyadenylation
biological_process	GO:0006281	DNA repair
biological_process	GO:0008152	metabolic process
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0030259	lipid glycosylation
biological_process	GO:0010214	seed coat development
biological_process	GO:0009845	seed germination
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0009411	response to UV
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009409	response to cold
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0019745	pentacyclic triterpenoid biosynthetic process
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006493	protein O-linked glycosylation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0010362	negative regulation of anion channel activity by blue light
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:1901918	negative regulation of exoribonuclease activity
biological_process	GO:0042793	plastid transcription
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006417	regulation of translation
biological_process	GO:0006396	RNA processing
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0019439	aromatic compound catabolic process
biological_process	GO:0019285	glycine betaine biosynthetic process from choline
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0000272	polysaccharide catabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0015969	guanosine tetraphosphate metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0006412	translation
biological_process	GO:0071705	nitrogen compound transport
biological_process	GO:0050896	response to stimulus
biological_process	GO:0000256	allantoin catabolic process
biological_process	GO:0006145	purine nucleobase catabolic process
biological_process	GO:0010136	ureide catabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006656	phosphatidylcholine biosynthetic process
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0006646	phosphatidylethanolamine biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006002	fructose 6-phosphate metabolic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0019295	coenzyme M biosynthetic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009638	phototropism
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0010218	response to far red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010114	response to red light
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0010118	stomatal movement
biological_process	GO:0006952	defense response
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0010608	posttranscriptional regulation of gene expression
biological_process	GO:0010286	heat acclimation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009637	response to blue light
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009750	response to fructose
biological_process	GO:0009749	response to glucose
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0006810	transport
biological_process	GO:0070988	demethylation
biological_process	GO:0006040	amino sugar metabolic process
biological_process	GO:0006950	response to stress
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0030029	actin filament-based process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0055129	L-proline biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0050821	protein stabilization
biological_process	GO:1902171	regulation of tocopherol cyclase activity
biological_process	GO:0030001	metal ion transport
biological_process	GO:0006537	glutamate biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006086	acetyl-CoA biosynthetic process from pyruvate
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0009725	response to hormone
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0030048	actin filament-based movement
biological_process	GO:0009611	response to wounding
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006580	ethanolamine metabolic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0017177	glucosidase II complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005840	ribosome
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005945	6-phosphofructokinase complex
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0045254	pyruvate dehydrogenase complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0008728	GTP diphosphokinase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0003872	6-phosphofructokinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0018489	vanillate monooxygenase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016298	lipase activity
molecular_function	GO:0004305	ethanolamine kinase activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016831	carboxy-lyase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004350	glutamate-5-semialdehyde dehydrogenase activity
molecular_function	GO:0004349	glutamate 5-kinase activity
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008886	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0052667	phosphomethylethanolamine N-methyltransferase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0000234	phosphoethanolamine N-methyltransferase activity
molecular_function	GO:0071522	ureidoglycine aminohydrolase activity
molecular_function	GO:0004575	sucrose alpha-glucosidase activity
molecular_function	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0004697	protein kinase C activity
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0009882	blue light photoreceptor activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0003914	DNA (6-4) photolyase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003904	deoxyribodipyrimidine photo-lyase activity
molecular_function	GO:0016906	sterol 3-beta-glucosyltransferase activity
molecular_function	GO:0004652	polynucleotide adenylyltransferase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0016161	beta-amylase activity
molecular_function	GO:0016708	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0019133	choline monooxygenase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0050242	pyruvate, phosphate dikinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0022857	transmembrane transporter activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24521	0.91	Barchart \| Table
Spo04392	0.85	Barchart \| Table
Spo11681	0.81	Barchart \| Table
Spo25866	0.81	Barchart \| Table
Spo26224	0.78	Barchart \| Table
Spo25493	0.78	Barchart \| Table
Spo04790	0.76	Barchart \| Table
Spo25478	0.75	Barchart \| Table
Spo20043	0.75	Barchart \| Table
Spo12656	0.75	Barchart \| Table
Spo04300	0.75	Barchart \| Table
Spo20891	0.75	Barchart \| Table
Spo23258	0.74	Barchart \| Table
Spo22921	0.74	Barchart \| Table
Spo00314	0.74	Barchart \| Table
Spo13645	0.74	Barchart \| Table
Spo08289	0.74	Barchart \| Table
Spo06012	0.74	Barchart \| Table
Spo08309	0.74	Barchart \| Table
Spo20783	0.73	Barchart \| Table
Spo01230	0.73	Barchart \| Table
Spo14558	0.72	Barchart \| Table
Spo19492	0.72	Barchart \| Table
Spo05552	0.72	Barchart \| Table
Spo15949	0.72	Barchart \| Table
Spo17197	0.72	Barchart \| Table
Spo16239	0.71	Barchart \| Table
Spo06852	0.71	Barchart \| Table
Spo07856	0.71	Barchart \| Table
Spo04553	0.71	Barchart \| Table
Spo24392	0.71	Barchart \| Table
Spo02702	0.71	Barchart \| Table
Spo26703	0.71	Barchart \| Table
Spo11577	0.71	Barchart \| Table
Spo18174	0.71	Barchart \| Table
Spo05490	0.71	Barchart \| Table
Spo17345	0.71	Barchart \| Table
Spo12108	0.71	Barchart \| Table
Spo30001	0.70	Barchart \| Table
Spo02443	0.70	Barchart \| Table
Spo05020	0.70	Barchart \| Table
Spo09717	0.70	Barchart \| Table
Spo10330	0.70	Barchart \| Table
Spo12240	0.70	Barchart \| Table
Spo13643	0.70	Barchart \| Table
Spo17134	0.70	Barchart \| Table
Spo17865	0.70	Barchart \| Table
Spo19812	0.70	Barchart \| Table
Spo20801	0.70	Barchart \| Table
Spo20895	0.70	Barchart \| Table
Spo26520	0.70	Barchart \| Table
Spo26790	0.70	Barchart \| Table
Spo16912	0.69	Barchart \| Table
Spo09775	0.69	Barchart \| Table
Spo16789	0.69	Barchart \| Table
Spo25929	0.69	Barchart \| Table
Spo24770	0.69	Barchart \| Table
Spo22171	0.69	Barchart \| Table
Spo12079	0.69	Barchart \| Table
Spo17199	0.69	Barchart \| Table
Spo11303	0.69	Barchart \| Table
Spo06803	0.69	Barchart \| Table
Spo21955	0.68	Barchart \| Table
Spo14473	0.68	Barchart \| Table
Spo15180	0.68	Barchart \| Table
Spo15967	0.68	Barchart \| Table
Spo17011	0.68	Barchart \| Table
Spo05583	0.68	Barchart \| Table
Spo26739	0.68	Barchart \| Table
Spo04912	0.68	Barchart \| Table
Spo00135	0.68	Barchart \| Table
Spo21378	0.68	Barchart \| Table
Spo21749	0.68	Barchart \| Table
Spo21884	0.68	Barchart \| Table
Spo22000	0.68	Barchart \| Table
Spo01697	0.68	Barchart \| Table
Spo01174	0.68	Barchart \| Table
Spo10370	0.68	Barchart \| Table
Spo10086	0.67	Barchart \| Table
Spo19174	0.67	Barchart \| Table
Spo19728	0.67	Barchart \| Table
Spo26306	0.67	Barchart \| Table
Spo18115	0.67	Barchart \| Table
Spo27353	0.67	Barchart \| Table
Spo09712	0.67	Barchart \| Table
Spo09585	0.67	Barchart \| Table
Spo10957	0.67	Barchart \| Table
Spo26503	0.67	Barchart \| Table
Spo25324	0.67	Barchart \| Table
Spo03084	0.67	Barchart \| Table
Spo25588	0.67	Barchart \| Table
Spo01533	0.67	Barchart \| Table
Spo15990	0.67	Barchart \| Table
Spo15691	0.67	Barchart \| Table
Spo25919	0.67	Barchart \| Table
Spo08196	0.67	Barchart \| Table
Spo00384	0.67	Barchart \| Table
Spo14830	0.66	Barchart \| Table
Spo05067	0.66	Barchart \| Table
Spo20254	0.66	Barchart \| Table
Spo03650	0.66	Barchart \| Table
Spo20424	0.66	Barchart \| Table
Spo21966	0.66	Barchart \| Table
Spo25689	0.66	Barchart \| Table
Spo10280	0.66	Barchart \| Table
Spo12922	0.66	Barchart \| Table
Spo04615	0.66	Barchart \| Table
Spo25796	0.66	Barchart \| Table
Spo20949	0.66	Barchart \| Table
Spo11201	0.66	Barchart \| Table
Spo06838	0.66	Barchart \| Table
Spo04116	0.66	Barchart \| Table
Spo27354	0.66	Barchart \| Table
Spo08319	0.66	Barchart \| Table
Spo08654	0.66	Barchart \| Table
Spo07813	0.65	Barchart \| Table
Spo03985	0.65	Barchart \| Table
Spo03975	0.65	Barchart \| Table
Spo24757	0.65	Barchart \| Table
Spo16494	0.65	Barchart \| Table
Spo05438	0.65	Barchart \| Table
Spo18929	0.65	Barchart \| Table
Spo08337	0.65	Barchart \| Table
Spo05161	0.65	Barchart \| Table
Spo20357	0.65	Barchart \| Table
Spo20602	0.65	Barchart \| Table
Spo20837	0.65	Barchart \| Table
Spo13928	0.65	Barchart \| Table