Spo24536 (gene) | SpinachBase

Overview


Name	Spo24536
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	chr3 : 112502780 .. 112508469 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGTTAACAATAATTCTTCCAACCGTCAACTCTTCTTTCAACTGAACATACAAAACCAACTTCCACTTTGTTGAAACTCCAAGATATTTCTTTCTTCCTCTCCCTTTTTAAATTTCTTCTCAGATGTTCGCCATCTTTTGCACCTTTCATTTCGAAACATCACTACATCACTACAATTCTCCAAATATCTTTATTGATTTGGATTTGCTTTCATTTGATTCTTCCATTTTCCCCTAATTTCATCTACAATATCCATCAAACTTCAATGAATTCAGCTACAGAAATCTAGCCCCCTTTTGTTCAAATTAGGGTTTATGATCTCCGCTGGTGCTCGGAACCCAGTAATTGCGGTTGGGAATAATGACATTTTAACCCAAAATTTGAGCTGATTTTGATAATTTAAGCTTACAACGAACCATTCTTTAAGAAGATGACATCTGCAAAAACAAATTTAGTTATGACAGTGATTGGATTTGTAGTCAGCACTTTGTTTATAGTCTTCATTTGCACTAGACTCATCTGTGCTCGGATTCAATTGCGCGCTTCTCGTCGAAATTTCCGTCGCCATTTTGCGTCATCTAGATCTAATCTCAGTACTGTAAGCATCTGTTTCCCGAATCAATTTTCCCTCCTTTTTTTTGTTTGCTTTGTTTTCGATTTGAAGTGTCGGATTTTGAAAAACAGCGTCGTATCTGAAGTTGACTGGTTGATAGGCTTTAGGCATGAGTGATTCTCCTCTGAAAAGGAGTTTTAACTTTTCTACTTTTTGTTTCCCTTCTGTTTTTGGCAATCAAAATTAAGTTCATATGATGCTTTATATAACGATACTGCTCTTCTTCGGCATTAGTATGTTGAGTTTTTTTTAATTAAAACTTAGGATTATTGTTCAATTTGATTGATTAATTCTTTCGTGTTATTAATTTTTTAAGCTGATGAATAGCTGCAATATAATTTTACAGTTAGAGCGGGGAATGCACGGTGTGGAACCTCCAATAATTGCGAATTTTCCGGCCAAAAAGTACGGCGACGAATATTTCTCCTCGGCAGAAAGTGGGCAGTAAGCTATTTATCTTTTCTGCTGATGAGTGAATTTTTCTTTAGAATTATGTTGCTTCGGCTCGTTGGGTTTTATTTTAATCTTTTAGTTGAGAACTGAGTAGAGTTTTCCATGCCCTTTCTTTTTAAAAATGCGAAGAAGGAAGTATACTGATGAAGTCTTGGCGTAACTGAGGTCCTGCTTGTTATGTTTGAATCCCCCTCCCCCCTTTGTATTTTGTAATGCTCTTGCGGCTCATTCACACACACAAAAAAAAAAAAACTAATATTTTACGGAGTAGTAATCAGTCATTCAGTGGGATAGTTAGGCTTTTTATTGTGCTTCAACTGCATTCATATGGAATTGACATTGGATCTTTAAAGGTTGATCGTGCATGCTCCTGCAGTTTTCCGTGATCCTTTAAGCTTCCCATCGTCATGTGTATTCTGTTATTTTCGTGTGAAATGAAGGGTTGATCATAGGATATGAGCACTGGAGATTCATTCTCCATTGTATATTACTGGAAGTGGAGAGCTATATAAACTTGAAACATTCTTTACCTCTTTAATACACATAGCGTGAGTCTAATAGACTAGTCCTCCAGGGTGAAACATTCTCTTACAACTCTTGGTTGTTTAGGTAAAGGATTCATATATCTAGGTTTGCTTCCCAGACCTGTCAATGGGATTTGAATTGCTTTTGTACTAGTTTTAGGACCTGGAATGACAAAATTTTGCTTGAGTTCTCATTATTTATGATCGGTGAGTTTTGTGAAGGCATAATAACATAACAAATTAACAAGTACACCCACAATTTCTGTAGTGTTCTGACTGGTTAGATTTATACACCTATTTAAGATAAATTTGTATAACTTAAATCTATGGCTTCTAAAGAGCTATTCAAATTATTTGCTTCAGAGGAATACAAGTCTAAAGTAATGTTATTTTCGTTCTTTTTAAATATTAGTAAAGAAAGGGAAAGGATGATAAGAGAAAGGAAAGTGATTTTATTTTCCATTGTTTCGTTTAATGAAAAGAATTGTAGGGGAGAGAAAGAAATTTAGATTTTCAGCTTTTTTATATTTTTGTTTCCTCTCAAAGTTCCTCAAATTTTGGGAAGAAAGGAAAGTGAATTTTTTTAAAGGGGCTTTCCTCTCACTTCCCTTCCTTTCCTATCAAATCTCTTGAAATTTATTAAACCAAACATGAGAACATAATATAAACATGAGAACAGTGGCGCAACCCCTCCCCCTATCTATGCTACTGAACTCAAAGCAAGCGGGTAGGTAGATTTATCTCTTACCTAGATTAAATAATAGTGTGTGAGGAGAAACAGATGAGATTCACAAACCAAATAAAGTATGGAGCAAACAAATAGGAACATCCATTTTGGTATATAGGGATCTTTTAGGGATGAAGGGAGTATATAGTAGACATAAGCCTTATAATAATTTTCTTTATGGTGAAGTACCGCCCCAGGTTTTTAGTTTGAAGTCTTTACAAACCATATTCCTCTGTGGTATATAATTTTTTTAGGTGGTACCATTAGCCGTTACAAATTTATTTCTAGGCTTCCAAATCTCGATGTCCTTTGGCTAGGGTTTAGTGGTTTAACAGTTAAATAGATTGAAACCGAATAAAACGATCACAGGTGCAAATAAATATATTTAACACGATTATTTATGGAGAAATTTACAAGTGGTGTTCACATTTGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACTACTCTCATTTTGACTTATGTTTGCTTCCCTAGAAAAATATACTTGTACGAAAACTTAATTTTTGACTTTTTGTACAATATGCTACAAGGATTCCCATCTCCTTCAGAACTCGTTTGGTGATGCCTCATTAAAAAATGAGTCTCTAAGGCTTATCATGTTCACTTTAGAATTTGATCAAGTTTCTGGGCAGGGATGATGAATTTGTTGGTGTTGAATTATATGCTTTTCTAAAATAATGAGGGACATGAAAGTTAGGGAAATCATATCAGTTAATAAGGAAAAAACAGGCATTTTGCATTTGACAAAATCTCTGACTGGAAAAAAGGGATGGAAATGGCCTGAAAGTTTCATGATTGTATGTGAAATTGATAACAATAGGAACTGGCTTAGATGTACGTCAGAAAAATCCAAATTGATATTTGAGCTAAAATTGAAGTAGGAGAATTGTTTCGCTGAAGGCAGCATATTATTTTTGATTCCAAACCAACTCTATTTGATTGATAGTTGAGTTCTACAGACTACTAATAATTTCCTCAAATTTCCTAAAGTGATCTCAGGGCCAGCTTGCTTCTTTGCAAGTATGTGGCTACGTTGTCCGCAAAAACACTCCTTTAATGGCACTCCTGCGAATGGAAATTTCCATAAAATTCTGGCTGTTCAAGGAAACTAATTTTATGAATAAACAGCAGAGAGGAATAAAAGATCATGGAAGATGAATGTGAAGACAGTGGAGAATAGTGGAAGTTTTAGTTTCATTTAGTATGATTCTGAAGGAGGTGGGAATAGTATGTGTTTTAGAGAAAATGGATGAAACGTGATAACCTTTGTGAAGAAGATTATAGGGCTTCCATCGATCTCTTGATTATCCAAGTGTCTACTTATTGTGCATATTTATCATAGTCTTAGATGCATGTCATGAATCCTTTTCAAATGGAAACTATATTTAATATCCTTTGTGGTTTGGACTCTAGAAGTATCCAATAAAATATAGGAAGAATTGACAACAATAATTCCACCTTTTAATGGTCTTCTTAAAACGGTCCCAACTTTTAATTAACTAGGCATAATCCTTCTTTTGGGGGTTGTCTTCTCAAATTGGTCCTCAGTCATCTTCAACTTGAAGAACTGGTTTTTCCTGTCATCCTCCTCCACCACCTTCGTTACACTATGCTCACCACCTGTCCACCCACCCTTCGATGTTCCACTGAGTACCCTACTGCCACTGCCACCGCCGCCGCCACCCACCATCTTCCTTCCTTAACTGGTATTTTTATCCTTTAAATTCCCCAGCGTATTCCTTCCCTGAACACCTTCCACACCCCCCTTCTTCACCACCATCCCAAACCGAATTCACACTGCCCATCATATTTACCCCTACCACTCCATGTCCTTAAAAGCCAGTCTAATATCTCACCTCTAACACTTACGGAGTAACTTATAAAGTCATACCCAAATAATAATGTACCAATTAATTGAGATTTAACTGAAATCAACAAAGCCTGCAAGAAAAGATAATTAAGCCTATGCAAATTAGCTAATTAGGGGACATTCACATAAATGTTTAACATATGATTTGATTAATAGAATTTTAAAATTTACTCATGGTAATGCATAAATGAGAAGAGAAGAAGTGCAGCTATATAACAGAGAAGAATTAGAATTGGTGGCTTTGTGGGGAAACGTATGTAAGTTGAACGTATCTTGTTGGTACTTGGTAGTTAGAGTAATGGGGATTTGTGGGGGTGAAGCCAACAAGGAAGGAGAAGTGGGCTGGACAGTGGGGAGGATGAGAAAAGAAAGTGGAAGAGGGTTTTTTTTTCCATATTAAATTTTTTAGACAAATAAGAGTGTTACACGTGTTAACTTTTACCTGTTATACTAGTTACTAAAGGTTAAGGATCAATTTGAGAAGTCGACCCCAAGGTTGGATCATTCCCCAGTTAATTTAAAGTTGCAACTATTTTAAGAAGATTGTTCAAAGGTGGGATTATTGTTATCAACTTTTCCTAAAATATATGCCGTTCTTATATACGAAGTGTGAACGGAAGGTCATTGCATATAAAACGAAGGGTCAATCGGAAATGCCTCTCTGTTATCGCAGAGGTAATGTATTTGATCTGCATACATTGATCATTCAACCCCCTTTTGACCTACCTGGAGCAAGGGCTAGTTAGAAGTTAGAACCATTGCAAAAAAATTAATGTGTACACCGTTTATTAACTGGGAATGATACATGGTTTATTCGTCATTTTGGACTTTCTGAGTATGATACCTTTGCAAAAAAATCTACATGGAATGATACATGGATTAATGTAACCATGTGCCATTCTGAGTATGATACATGGTTTATTCGTCATTTTGGACTTTCCTTCATGTGTATGCTTGTGCTCTGTGCTCTTATCCTCAACTGGTTATAAATTCTATTGTAGTAAGCACTGGATACTTGTTTGCTGCTCTGGCTTGGTTATCTGTAGTAGTGAATTGAGTACTGAAATGTCTACTTGTAGATGCTCTATTTGCTTGGCTGAATACCACAAGGAAGATGTATTGCGCATACTCCCTTACTGTGGTCACTACTTTCACATAAAGTGCATAGATATATGGCTGCTTCAACATTGCACCTGCCCAGTTTGTCGGATTTCGTTGCGTGAGACTAATGAGAAGAAACGATCAATGCAGTTAATGTCAAGTTCTCGATCTCATTTTGATACTGATTTTCCTGCTCGTCAGTGTAGATTTTTATCGAGAATTCCAGAAACTCGTAGGACAGATCCCATTCAAGAGAACCAATTTGTGTCTCATGTTGGAATAGAAGCAGCCTTAGATAACAGGCTGTTACCTGAAGATGGTATCGTAAAAGACCCCGCCAGCAAACATGTAGAGAGCCCATCATCTGCATAG

mRNA sequence

AGAAGTTAACAATAATTCTTCCAACCGTCAACTCTTCTTTCAACTGAACATACAAAACCAACTTCCACTTTGTTGAAACTCCAAGATATTTCTTTCTTCCTCTCCCTTTTTAAATTTCTTCTCAGATGTTCGCCATCTTTTGCACCTTTCATTTCGAAACATCACTACATCACTACAATTCTCCAAATATCTTTATTGATTTGGATTTGCTTTCATTTGATTCTTCCATTTTCCCCTAATTTCATCTACAATATCCATCAAACTTCAATGAATTCAGCTACAGAAATCTAGCCCCCTTTTGTTCAAATTAGGGTTTATGATCTCCGCTGGTGCTCGGAACCCAGTAATTGCGGTTGGGAATAATGACATTTTAACCCAAAATTTGAGCTGATTTTGATAATTTAAGCTTACAACGAACCATTCTTTAAGAAGATGACATCTGCAAAAACAAATTTAGTTATGACAGTGATTGGATTTGTAGTCAGCACTTTGTTTATAGTCTTCATTTGCACTAGACTCATCTGTGCTCGGATTCAATTGCGCGCTTCTCGTCGAAATTTCCGTCGCCATTTTGCGTCATCTAGATCTAATCTCAGTACTTTAGAGCGGGGAATGCACGGTGTGGAACCTCCAATAATTGCGAATTTTCCGGCCAAAAAGTACGGCGACGAATATTTCTCCTCGGCAGAAAGTGGGCAATGCTCTATTTGCTTGGCTGAATACCACAAGGAAGATGTATTGCGCATACTCCCTTACTGTGGTCACTACTTTCACATAAAGTGCATAGATATATGGCTGCTTCAACATTGCACCTGCCCAGTTTGTCGGATTTCGTTGCGTGAGACTAATGAGAAGAAACGATCAATGCAGTTAATGTCAAGTTCTCGATCTCATTTTGATACTGATTTTCCTGCTCGTCAGTGTAGATTTTTATCGAGAATTCCAGAAACTCGTAGGACAGATCCCATTCAAGAGAACCAATTTGTGTCTCATGTTGGAATAGAAGCAGCCTTAGATAACAGGCTGTTACCTGAAGATGGTATCGTAAAAGACCCCGCCAGCAAACATGTAGAGAGCCCATCATCTGCATAG

Coding sequence (CDS)

ATGACATCTGCAAAAACAAATTTAGTTATGACAGTGATTGGATTTGTAGTCAGCACTTTGTTTATAGTCTTCATTTGCACTAGACTCATCTGTGCTCGGATTCAATTGCGCGCTTCTCGTCGAAATTTCCGTCGCCATTTTGCGTCATCTAGATCTAATCTCAGTACTTTAGAGCGGGGAATGCACGGTGTGGAACCTCCAATAATTGCGAATTTTCCGGCCAAAAAGTACGGCGACGAATATTTCTCCTCGGCAGAAAGTGGGCAATGCTCTATTTGCTTGGCTGAATACCACAAGGAAGATGTATTGCGCATACTCCCTTACTGTGGTCACTACTTTCACATAAAGTGCATAGATATATGGCTGCTTCAACATTGCACCTGCCCAGTTTGTCGGATTTCGTTGCGTGAGACTAATGAGAAGAAACGATCAATGCAGTTAATGTCAAGTTCTCGATCTCATTTTGATACTGATTTTCCTGCTCGTCAGTGTAGATTTTTATCGAGAATTCCAGAAACTCGTAGGACAGATCCCATTCAAGAGAACCAATTTGTGTCTCATGTTGGAATAGAAGCAGCCTTAGATAACAGGCTGTTACCTGAAGATGGTATCGTAAAAGACCCCGCCAGCAAACATGTAGAGAGCCCATCATCTGCATAG

Protein sequence

MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVGIEAALDNRLLPEDGIVKDPASKHVESPSSA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24536.1	Spo24536.1	mRNA

Homology

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BLAST of Spo24536.1 vs. NCBI nr
Match: gi|902210728|gb|KNA16519.1| (hypothetical protein SOVF_088460 [Spinacia oleracea])

HSP 1 Score: 426.4 bits (1095), Expect = 3.000e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


		  
Query: 10  MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII 69
           MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII
Sbjct: 1   MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII 60

Query: 70  ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP 129
           ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP
Sbjct: 61  ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP 120

Query: 130 VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG 189
           VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG
Sbjct: 121 VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG 180

Query: 190 IEAALDNRLLPEDGIVKDPASKHVESPSSA 220
           IEAALDNRLLPEDGIVKDPASKHVESPSSA
Sbjct: 181 IEAALDNRLLPEDGIVKDPASKHVESPSSA 210

[Close]

BLAST of Spo24536.1 vs. NCBI nr
Match: gi|731365746|ref|XP_010694693.1| (PREDICTED: RING-H2 finger protein ATL74-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 356.3 bits (913), Expect = 3.800e-95
Identity = 185/223 (82.96%), Postives = 194/223 (87.00%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           MT+A+TNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFR H AS RSNLS LERG
Sbjct: 1   MTTARTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRHHIAS-RSNLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HGVE PI+ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI
Sbjct: 61  VHGVELPIVANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHFDTDFPA---RQCRFLSRIPETRRTD 180
           WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSH  TDF A   RQCRF+SR  ET   +
Sbjct: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHLSTDFLAISPRQCRFISRTAETHMRN 180

Query: 181 PIQENQFVSHVGIEAALDNRLLPED-GIVKDPASKHVESPSSA 220
            +Q+NQ V H   EAA DN   PE+ GIVKDP SKHVESPS A
Sbjct: 181 SMQDNQLVPHGVTEAARDNTQFPEENGIVKDPKSKHVESPSLA 222

[Close]

BLAST of Spo24536.1 vs. NCBI nr
Match: gi|657949923|ref|XP_008345511.1| (PREDICTED: putative RING-H2 finger protein ATL61 [Malus domestica])

HSP 1 Score: 238.8 bits (608), Expect = 8.900e-60
Identity = 132/228 (57.89%), Postives = 158/228 (69.30%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M S+  NLVMTVIGF VST+FIVF+CTRL+CARI L  SRR+F     +SRS+LS LERG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFP---IASRSDLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HGVEP ++A FP KKY D +FS+AE  QC++CLAEYH +DVLRILPYC H FH+ CIDI
Sbjct: 61  LHGVEPVVVAKFPTKKYSDAFFSAAEDAQCTVCLAEYHGDDVLRILPYCEHSFHVTCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD-FPARQCRFL-----SRIPE 180
           WL QH TCPVCRISLRE  E+KR MQ + SS  RSH+ T+ F     R+L     SR  E
Sbjct: 121 WLQQHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGTESFNTHSYRYLLNSRASRTHE 180

Query: 181 TRRTDPIQENQFVSHVGIEAALDNR--LLPEDGIVKDPASKHVESPSS 219
               DPIQE+   S      A +N   L   + I KD A+KHVESPS+
Sbjct: 181 NHGMDPIQEDNAASEGDATDARENSSPLTESNQISKDSANKHVESPSN 225

[Close]

BLAST of Spo24536.1 vs. NCBI nr
Match: gi|590566979|ref|XP_007010386.1| (RING/U-box superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 238.0 bits (606), Expect = 1.500e-59
Identity = 135/230 (58.70%), Postives = 156/230 (67.83%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M SA  NLVMTVIGF VST+FIVF+CTRL+CARIQL ASRR+F     +SRS+LS LERG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFP---VASRSDLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
            HG+EP ++ANFP KKY DE F + E  QC++CL+EYH EDVLRILPYCGH FHI CIDI
Sbjct: 61  FHGLEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD-FPARQCR-------FLSRI 180
           WL QH TCPVCR+SLRE  EKKR MQ + SS  RSHF  + F    C        F SR 
Sbjct: 121 WLQQHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMESFNTHSCNCLLRGHGFPSRA 180

Query: 181 PETRRTDPIQENQFVS-HVGIEAALDNRLLPE-DGIVKDPASKHVESPSS 219
            +     PIQEN F S   G E   +   + E D  +KD  SK VESPS+
Sbjct: 181 HDNGGMGPIQENSFASGGNGAEVGENMSQIAEGDQAIKDSRSKRVESPSN 227

[Close]

BLAST of Spo24536.1 vs. NCBI nr
Match: gi|728825714|gb|KHG06375.1| (RING-H2 finger ATL32 -like protein [Gossypium arboreum])

HSP 1 Score: 236.1 bits (601), Expect = 5.800e-59
Identity = 130/229 (56.77%), Postives = 159/229 (69.43%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M S   NLVMTVIGF VS +FIVFICTRLICARIQLRASRR F     SSRS+L+ LERG
Sbjct: 1   MISGGLNLVMTVIGFTVSIMFIVFICTRLICARIQLRASRRPFA---ISSRSDLNMLERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HG+EP ++ANFP K + DE FS+ +  QC++CL+EY +EDVLRILPYCGH FH+ CID+
Sbjct: 61  LHGIEPVVVANFPTKTFCDECFSANKDAQCTVCLSEYRREDVLRILPYCGHSFHVTCIDL 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD--------FPARQCRFLSRI 180
           WL QH TCPVCRISLRE  EKKR MQ + SS  RSHF T+           R  RF SR 
Sbjct: 121 WLQQHSTCPVCRISLRELPEKKRLMQPLFSSADRSHFGTESFNMHTYNCLLRGHRFPSRT 180

Query: 181 PETRRTDPIQENQFVS-HVGIEAALDNRLLPEDGIVKDPASKHVESPSS 219
            E+   DP QEN F + ++G    +   +  ++G +K+P  K VESPS+
Sbjct: 181 SESPEMDPNQENSFATGNLGSGENMSRTIENDEGNIKEPRKKLVESPSN 226

[Close]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBX4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088460 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.100e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


		  
Query: 10  MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII 69
           MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII
Sbjct: 1   MTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPII 60

Query: 70  ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP 129
           ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP
Sbjct: 61  ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHCTCP 120

Query: 130 VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG 189
           VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG
Sbjct: 121 VCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCRFLSRIPETRRTDPIQENQFVSHVG 180

Query: 190 IEAALDNRLLPEDGIVKDPASKHVESPSSA 220
           IEAALDNRLLPEDGIVKDPASKHVESPSSA
Sbjct: 181 IEAALDNRLLPEDGIVKDPASKHVESPSSA 210

[Close]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g094940 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.700e-95
Identity = 185/223 (82.96%), Postives = 194/223 (87.00%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           MT+A+TNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFR H AS RSNLS LERG
Sbjct: 1   MTTARTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRHHIAS-RSNLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HGVE PI+ANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI
Sbjct: 61  VHGVELPIVANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHFDTDFPA---RQCRFLSRIPETRRTD 180
           WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSH  TDF A   RQCRF+SR  ET   +
Sbjct: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHLSTDFLAISPRQCRFISRTAETHMRN 180

Query: 181 PIQENQFVSHVGIEAALDNRLLPED-GIVKDPASKHVESPSSA 220
            +Q+NQ V H   EAA DN   PE+ GIVKDP SKHVESPS A
Sbjct: 181 SMQDNQLVPHGVTEAARDNTQFPEENGIVKDPKSKHVESPSLA 222

[Close]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Match: A0A061FRE6_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044140 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.100e-59
Identity = 135/230 (58.70%), Postives = 156/230 (67.83%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M SA  NLVMTVIGF VST+FIVF+CTRL+CARIQL ASRR+F     +SRS+LS LERG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFP---VASRSDLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
            HG+EP ++ANFP KKY DE F + E  QC++CL+EYH EDVLRILPYCGH FHI CIDI
Sbjct: 61  FHGLEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD-FPARQCR-------FLSRI 180
           WL QH TCPVCR+SLRE  EKKR MQ + SS  RSHF  + F    C        F SR 
Sbjct: 121 WLQQHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMESFNTHSCNCLLRGHGFPSRA 180

Query: 181 PETRRTDPIQENQFVS-HVGIEAALDNRLLPE-DGIVKDPASKHVESPSS 219
            +     PIQEN F S   G E   +   + E D  +KD  SK VESPS+
Sbjct: 181 HDNGGMGPIQENSFASGGNGAEVGENMSQIAEGDQAIKDSRSKRVESPSN 227

[Close]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N061_GOSAR (RING-H2 finger ATL32-like protein OS=Gossypium arboreum GN=F383_32960 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.000e-59
Identity = 130/229 (56.77%), Postives = 159/229 (69.43%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M S   NLVMTVIGF VS +FIVFICTRLICARIQLRASRR F     SSRS+L+ LERG
Sbjct: 1   MISGGLNLVMTVIGFTVSIMFIVFICTRLICARIQLRASRRPFA---ISSRSDLNMLERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HG+EP ++ANFP K + DE FS+ +  QC++CL+EY +EDVLRILPYCGH FH+ CID+
Sbjct: 61  LHGIEPVVVANFPTKTFCDECFSANKDAQCTVCLSEYRREDVLRILPYCGHSFHVTCIDL 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD--------FPARQCRFLSRI 180
           WL QH TCPVCRISLRE  EKKR MQ + SS  RSHF T+           R  RF SR 
Sbjct: 121 WLQQHSTCPVCRISLRELPEKKRLMQPLFSSADRSHFGTESFNMHTYNCLLRGHRFPSRT 180

Query: 181 PETRRTDPIQENQFVS-HVGIEAALDNRLLPEDGIVKDPASKHVESPSS 219
            E+   DP QEN F + ++G    +   +  ++G +K+P  K VESPS+
Sbjct: 181 SESPEMDPNQENSFATGNLGSGENMSRTIENDEGNIKEPRKKLVESPSN 226

[Close]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Match: M1CLV4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027313 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.200e-57
Identity = 126/226 (55.75%), Postives = 153/226 (67.70%), Query Frame = 1


		  
Query: 1   MTSAKTNLVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSRSNLSTLERG 60
           M S+ TNLVMTVIGF VST+FIVF+CTRLICARIQL A RR+F     +SRS+LS LERG
Sbjct: 1   MISSGTNLVMTVIGFAVSTMFIVFVCTRLICARIQLNARRRSFAY---ASRSDLSILERG 60

Query: 61  MHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDI 120
           +HG+EP ++ANFP KKYGD +F+SAE  QC +CLAEY K+D LRILP CGH FH  CIDI
Sbjct: 61  LHGLEPLVVANFPTKKYGDVFFTSAEDAQCIVCLAEYQKQDALRILPICGHSFHATCIDI 120

Query: 121 WLLQHCTCPVCRISLRETNEKKRSMQLMSSS--RSHFDTD---FPARQCRFLSRIPETRR 180
           W  QH TCPVCRISLRET EKKR MQ + SS  RSHF+ D     +  C    +   + R
Sbjct: 121 WFQQHSTCPVCRISLRETPEKKRYMQPLFSSAIRSHFEMDSLNVSSNLCLSAEQRHSSLR 180

Query: 181 TDPIQENQFVSHVGIEAALDNRLLPEDGI--VKDPASKHVESPSSA 220
           TD   + Q     G+     N ++  +     K+  +K VESPS+A
Sbjct: 181 TDSTTDTQCPPEAGMMVVRGNNVISNEDSQNTKNSENKQVESPSNA 223

[Close]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Match: ATL7_ARATH (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.100e-14
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1


		  
Query: 47  FASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRIL 106
           F  + +NLST E G+      I    P   Y + +    +  QCS+CL +Y  E+ L+ +
Sbjct: 73  FVPTNNNLSTAELGL---SKDIREMLPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQM 132

Query: 107 PYCGHYFHIKCIDIWLLQHCTCPVCRISL 136
           P CGH FH++CID+WL  H TCP+CR+SL
Sbjct: 133 PSCGHTFHMECIDLWLTSHTTCPLCRLSL 156

[Close]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Match: ATL59_ARATH (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.500e-14
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1


		  
Query: 47  FASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRIL 106
           F  + +NLST E G+      I    P   Y + +  +    QCS+CL +Y  E+ L+ +
Sbjct: 59  FVPTNNNLSTAELGL---SKDIREMLPIVIYKESF--TVNDTQCSVCLGDYQAEEKLQQM 118

Query: 107 PYCGHYFHIKCIDIWLLQHCTCPVCRISL 136
           P CGH FH++CID+WL  H TCP+CR+SL
Sbjct: 119 PSCGHTFHMECIDLWLTSHTTCPLCRLSL 142

[Close]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 7.400e-14
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 1


		  
Query: 11  TVIGFVVSTLFIVFICTRLI--CARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPI 70
           TV   +V+  F+  + +  I  CAR    +S R FR     +R+N  +  RG  G++  +
Sbjct: 48  TVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFR-----NRANDGSSRRG--GLDNAV 107

Query: 71  IANFPAKKYGDEYFSSAESG--QCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHC 130
           + +FP   Y     S   S   +C+ICL E    + +R+LP C H FHI CID WL  H 
Sbjct: 108 VESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHA 167

Query: 131 TCPVCRISLRETNEK 142
           TCPVCR +L   + K
Sbjct: 168 TCPVCRSNLTAKSNK 175

[Close]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.300e-13
Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 1


		  
Query: 48  ASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQ--CSICLAEYHKEDVLRI 107
           A    + +T+     G++  ++  FP   Y D        G+  C+ICL E+  ++ LR+
Sbjct: 84  AGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRL 143

Query: 108 LPYCGHYFHIKCIDIWLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCR 167
           LP C H FH  CID WL  H TCPVCR +L E   +  S++   +         P  + +
Sbjct: 144 LPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTE--------PDLELQ 203

Query: 168 FLSRIPETRRTDPIQENQFVSHVGIEAALDNRLLP 201
            +   PE   T P+ E    S V      D+R LP
Sbjct: 204 QVVVNPEPVVTAPVPEQLVTSEV------DSRRLP 224

[Close]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Match: ATL31_ORYSJ (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-13
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 1


		  
Query: 8   LVMTVIGFVVSTLFIVFICTRLICARIQLRASRRNFRRHFASSR--SNLSTLERGMHGVE 67
           LV  +  FV+ T+F V I     CA  Q RA  R   R  AS +     +   R   G++
Sbjct: 51  LVALITAFVLLTVFSVLINR---CA--QARAPPRRAFRSTASHQPVGGAAAASRASRGLD 110

Query: 68  PPIIANFPAKKYGD-EYFSSAESG--QCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWL 127
             ++  FP   YGD +   +A+SG  +C++CLAE+   D LR+LP C H FH  CID WL
Sbjct: 111 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 170

Query: 128 LQHCTCPVCRISL 136
               TCP+CR +L
Sbjct: 171 AAAVTCPLCRANL 178

[Close]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Match: AT4G10150.1 (RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.400e-16
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1


		  
Query: 47  FASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRIL 106
           F  + +NLST E G+      I    P   Y + +    +  QCS+CL +Y  E+ L+ +
Sbjct: 73  FVPTNNNLSTAELGL---SKDIREMLPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQM 132

Query: 107 PYCGHYFHIKCIDIWLLQHCTCPVCRISL 136
           P CGH FH++CID+WL  H TCP+CR+SL
Sbjct: 133 PSCGHTFHMECIDLWLTSHTTCPLCRLSL 156

[Close]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Match: AT4G10160.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.400e-15
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1


		  
Query: 47  FASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRIL 106
           F  + +NLST E G+      I    P   Y + +  +    QCS+CL +Y  E+ L+ +
Sbjct: 59  FVPTNNNLSTAELGL---SKDIREMLPIVIYKESF--TVNDTQCSVCLGDYQAEEKLQQM 118

Query: 107 PYCGHYFHIKCIDIWLLQHCTCPVCRISL 136
           P CGH FH++CID+WL  H TCP+CR+SL
Sbjct: 119 PSCGHTFHMECIDLWLTSHTTCPLCRLSL 142

[Close]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Match: AT4G40070.1 (RING/U-box superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.200e-15
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 1


		  
Query: 11  TVIGFVVSTLFIVFICTRLI--CARIQLRASRRNFRRHFASSRSNLSTLERGMHGVEPPI 70
           TV   +V+  F+  + +  I  CAR    +S R FR     +R+N  +  RG  G++  +
Sbjct: 48  TVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFR-----NRANDGSSRRG--GLDNAV 107

Query: 71  IANFPAKKYGDEYFSSAESG--QCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWLLQHC 130
           + +FP   Y     S   S   +C+ICL E    + +R+LP C H FHI CID WL  H 
Sbjct: 108 VESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHA 167

Query: 131 TCPVCRISLRETNEK 142
           TCPVCR +L   + K
Sbjct: 168 TCPVCRSNLTAKSNK 175

[Close]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 7.100e-15
Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 1


		  
Query: 48  ASSRSNLSTLERGMHGVEPPIIANFPAKKYGDEYFSSAESGQ--CSICLAEYHKEDVLRI 107
           A    + +T+     G++  ++  FP   Y D        G+  C+ICL E+  ++ LR+
Sbjct: 84  AGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRL 143

Query: 108 LPYCGHYFHIKCIDIWLLQHCTCPVCRISLRETNEKKRSMQLMSSSRSHFDTDFPARQCR 167
           LP C H FH  CID WL  H TCPVCR +L E   +  S++   +         P  + +
Sbjct: 144 LPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTE--------PDLELQ 203

Query: 168 FLSRIPETRRTDPIQENQFVSHVGIEAALDNRLLP 201
            +   PE   T P+ E    S V      D+R LP
Sbjct: 204 QVVVNPEPVVTAPVPEQLVTSEV------DSRRLP 224

[Close]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.700e-14
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 1


		  
Query: 63  GVEPPIIANFPAKKYGDEYFSSAESGQCSICLAEYHKEDVLRILPYCGHYFHIKCIDIWL 122
           G++   I   P   YG+   S  +   C++CL E+   D LR+LP C H FH+ CID WL
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL 239

Query: 123 LQHCTCPVCRISLRETN 140
           L + TCP+CR SL  +N
Sbjct: 240 LSNSTCPLCRRSLSTSN 256

The following BLAST results are available for this feature:

BLAST of Spo24536.1 vs. NCBI nr
BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
BLAST of Spo24536.1 vs. TAIR (Arabidopsis)

BLAST of Spo24536.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210728\|gb\|KNA16519.1\|	3.0e-116	100.	hypothetical protein SOVF_0884...	[more]
gi\|731365746\|ref\|XP_010694693.1\|	3.8e-95	82.9	PREDICTED: RING-H2 finger prot...	[more]
gi\|657949923\|ref\|XP_008345511.1\|	8.9e-60	57.8	PREDICTED: putative RING-H2 fi...	[more]
gi\|590566979\|ref\|XP_007010386.1\|	1.5e-59	58.7	RING/U-box superfamily protein...	[more]
gi\|728825714\|gb\|KHG06375.1\|	5.8e-59	56.7	RING-H2 finger ATL32 -like pro...	[more]

BLAST of Spo24536.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RBX4_SPIOL	2.1e-116	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BBA5_BETVU	2.7e-95	82.9	Uncharacterized protein OS=Bet...	[more]
A0A061FRE6_THECC	1.1e-59	58.7	RING/U-box superfamily protein...	[more]
A0A0B0N061_GOSAR	4.0e-59	56.7	RING-H2 finger ATL32-like prot...	[more]
M1CLV4_SOLTU	2.2e-57	55.7	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo24536.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATL7_ARATH	1.1e-14	41.5	RING-H2 finger protein ATL7 OS...	[more]
ATL59_ARATH	2.5e-14	41.5	E3 ubiquitin-protein ligase AT...	[more]
ATL32_ARATH	7.4e-14	36.3	RING-H2 finger protein ATL32 O...	[more]
ATL6_ARATH	1.3e-13	30.9	E3 ubiquitin-protein ligase AT...	[more]
ATL31_ORYSJ	2.1e-13	39.1	E3 ubiquitin-protein ligase Os...	[more]

BLAST of Spo24536.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G10150.1	6.4e-16	41.5	RING/U-box superfamily protein	[more]
AT4G10160.1	1.4e-15	41.5	RING/U-box superfamily protein	[more]
AT4G40070.1	4.2e-15	36.3	RING/U-box superfamily protein	[more]
AT3G05200.1	7.1e-15	30.9	RING/U-box superfamily protein	[more]
AT3G48030.1	2.7e-14	42.8	hypoxia-responsive family prot...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 89..132 score: 1.0
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 90..131 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 90..132 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 87..135 score: 6.2
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 7..155 score: 2.3
None	No IPR available	PANTHER	PTHR14155:SF145	RING-H2 FINGER PROTEIN ATL61-RELATED	coord: 7..155 score: 2.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 89..137 score: 2.02

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071586	CAAX-box protein processing
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004222	metalloendopeptidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11116	0.69	Barchart \| Table
Spo01692	0.68	Barchart \| Table
Spo26763	0.67	Barchart \| Table