Spo24610 (gene) | SpinachBase

Overview


Name	Spo24610
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Zinc finger FYVE domain-containing protein 26 isoform 1
Location	chr4 : 104780626 .. 104785002 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCAGAATAATTTGAACCTGAAACATACATACACAGATCCTTAGTTTTAACCATTAGATCAAAATCGCATTAGTATAGATGATAATAGTAGATTTAGCATGACAACTCCAATACAAAATTACACGGATTAGTGAGACGTGTCTATTTAAACGAGTAAAACACGAATTGATTCACTCCCTATCGGGTTATAACTAGATTTTCTTATTAACCGAAAAGACATTCTGGATTATAATTTTATTTTTAAAAGTTAAAAGGTTCAGACATTCTTGATTCTTCAGTTTCCAAATAAATCGAAGAAAGAAGTAGATGCCACAGAGTATTGTTCTTCCCCGTAAAACAATAAATAAATCGGTTTTGAAGGAAGAAAAGGTCATTGCCCCATTTCCTGTCCCAAAATCCAGACAATATTTTGATCTTTCGAAATTGGTTGATGAAAGAAGGTGGAAGTATGTGATCATCCCATTCAACCCAACGGTAAACCCCTCTTCCTTATCTTCGTATGTTCTCAATAAATCATCAAAGCTGCAATTTCTTAATTTTTTTTCAATTTTTTTTTTTTTTTTGATTCTCTAGCAACTTTATAATCTGGGTTTGTGAAGTTTTTCTTGTTAAAGATTGTTTAGACTCTTAGAACAGTTAATCAAATTAATTGTTTCGGATTTTGGGTATTTTGACTGTTTGTAGAAGGATCATTTAACATGAATTAGTTTGATGATTTCCTTTGAATTGGAGCTTCCTCTTTCGATTTGTATGTACATTTTGGTCCCAAGTTTTCGTTTTAATTTTATTTTCGAATGAGATTTAAGAATTGGGTGTTTGAAGATGGGAAAGCAATGGAATATTTTGGCAATGCTTGTAATCAATAGGGCTAAAGTATGACATAGGGTAATTGAGGGATCCTTTTAAAGAGGGTTTCCAATTTTCTTTATACATTGGATTAATTGAACTAAAATGGTGGAAAATTTGGAAATGATGCAAAGTTTGTGATGCTTTCCTTGATTGAAACCCCTAGAAGTCGATGAAATTTGACAACTATCATAGCTTGTTTATAAGAAGATTGGGAGTATAGCTTTGGTAGAAAGATAAGGGATGGATCGAGTCATCGTATTAATGAATTTCTTGTTTAGATTGGCAATGGAATGTTGGGAACTTGGGATGATTCCTGAGATTTCTATGTAATAATATTTGGTTGAGACATGCTTGCTTTGAGGGTTTCTAAACCTCAAGTGGCTTGTGACCAAATTGGACACAATTCACCCAATAGGACCTTTTTTAGTATCAACAAAGAGTATGTCAGTACCAATAACGCAAGTGACTCTTATTGGTATGAATTAGTAGCGTATTGATACTGCAATAACACACTAATCATACCAATAACACAAGTGACTCTTACTGGTATTAATTAGTAGCGTATTGGGACACCAATAACACACTAATCAATACCAATACTAAATTAATCAGTACCGATACGAGTACTTGCGTCCAATATGGGTGCAAGCAACTTTTGACTTAGACTTTCTCGCCTAAAGTATCTCTCTAGTTGTAGGTGGTAAGACACATGTGGTTGATTACGTCGACAGCTTTTTCCATATTCAGGACATGATATGCTGCAGGTCTGAAGTTTTTCTGAATGCAGCATGGACAAATTGCTTGACTATTTAACAATTTCTGTTGGCAATGCCTTACATAGGGTTGGCTGGCCGGAGTGACTATATAAAATTGCTTTGTTCTTTTTATCATAATTCCTCTTATCTGAACTTTTAGCCCTTGTTTGAACTTGGGTTTAGTTGTAAAATGAACATGGTAGATGGTAGCCCTTAAAAACTTATTGAACCTTATATGAACTGAATGGCTGTCTTATGCACTAATCTTATAAAGTGAAAAGAACAAGACCTAAGTTATGGCCAGGGTAGATGATTGTGAAGGCTAACAAGTAACAAGTACAATGATGAGCCGAACTTCACCCCCATTTTGGACATTAAAATCTATTTTATGCCTGAAAAATATGCCACTCCATGTAAATTGATCATTTAACGGGAAAGTGCTGTAAAGAAAAGTTAGATCTTGATCATTATTTTTCAATTTTTGGCTTCCACATCTCTCTGTTGTTCCCAACTTTCTTTTGCTCAATCCCTTGGCATTAAACCACACTGCAAAATATGCTGAAGATAGCAGTATATTATCACACATTTGATTCAATATGTTAAATTTCTATCAATTTAGTCCGAGTATCTCTTCTAAAATAGCTCCCTATTTCTGTTTTCTATGTATTTGTTAATGCAGGCATTCTACATAGTACGAATCATATGATTGATGATATGGAACAAGAACTGAGAGTTGCTTCCATTGTTGATACTAGATTTCCCGGTAAGAACAAAGACTCAAGACCAAAACCAGACCCCCATCGACCTCTTTTGTTTACTGCAAAGGAACTTAGTTCCAGCATCATAGCCTCAGAAAGTACACGTACCATATGTTCTGTTTCAGTAGCTCTGCTAGTGGTTCTATCTTTCATCGATTATCCCTTACTTGGAATTAATATCGTGAATTCAAAGAGCATCATTGCTTTGAGGCCACTATATATGCTGTTAGTGACAGAATTCACTGTCATAATTTCATACCTTGTTTTAGAAAGACGAAATTCTGTATCATTTGAAGAAGATAGAAAGGGTTCAAAGGGAGGTGGAGTTAATTGGGAAAGAGCAGAGTTTCTGTTAGAGGGAGGTGTTGTGTTTCATCAAACGGTACGTGCTGTGTTTATCGATTTGAGTGTTTACGTTGTGCTTGTGATCTGTATTCTTTCTTTGGTAACTCGGATTTAGCTTTGCTGATGCTTTTGTTTGGGTTTAATGCAGTAACTTGTTTAGTTTGATTGTAATACTGAAATTTTCGGTAGGTTTTCTTTATTTTTGTTGTAAATGGAAATTAACAGACTGCAAAATAAGGCTGTATATAGAACTTTGGACACAAACAAATACTGGGATCCTTTTTCCTGATGTTTACAGAGATTTGGGTGTTGAACTGCTGTATGTATATGTATATCAGTTCTTTCTTTCGCCTTTTCGGAGAGTTTTGGTTCGGGCCTAGTCGGGTGAGCTGGCCCGGTTGATTGGCAGACTTATGTTTCTCAGTTTCGTCGGCTTTTTCTCCATTTTTTTTAATGTGAGCTGGGCATGGCTAGGTGTGGTTGCTCGGTCTGACCGTATGGCTAGGAGCGGGTGCAGAACATGGATTTTCCCGGTTGTGTTTTGTTTCTTATTCTCGTTTCATGCAGAAACTCCGTATTTCGCTATTATTCCCAACTAGACCGGATTAGAAGACGGGCTGGACTGTGAACTAAAAATCAGCCCATTTTATCGGGCCGGGCCAAACTCCATACCGACTTGTGTGCAAAACCGACTCTTTTGGGCCGAAAATAGTGGGCTTTTTGTGCCATTGGAATCAGGCTAATTTTATAACTAAAATTGTAGTTTTTAGTTGCCTAAAACCAGCCCAAAAAATCTAAAAAACGGTCCAGGTCCAAAAATGGGCCTACAAATCTACGCAAAACCCCGCATTTTTTTGGCAGGGTCAGACCGGGCTAATGGGTTGGGCACAAATTGATCAGGTCTATTCCCAACCTCAATATTCAGAATTACGGGGGAACCTAAACATAACAAATCCCATCCTAAATTAATACTCCCTCCGTTTCGAAATAAGGGGATAGTTTACCTTTTCAAGCTTGCCAATGTAAATGTTTGAACATTAATAATATCTCTAAATTTGTATTCGGTATTCTGAAAGTATATATCGTGAAGAATCAAACAAGATATCACACGACTATATTTGTCCTTACCCATAAATTGCAAATGATAGTCAAATTAAAATTGTGAATAGTATCAAAAGTCAAAGTGTTCCCATTATTTTAAAACGGATGAAATGCACAATAAACTTTCATAAGAGATTTGAGCAATTGTTGAACAAAGATCGCAACGGTGGGCAATGATGGCATATTGATTACTCCGTACATTCATATATTGTGATTAATTATTAGTTCGTACCAATTGATTGTTGGTTCAGTGGTGATTGAGGCCGAACTTGATAGGGAGGACCCGTGCTCGATCCCCCGCAACAACAATTGGGAGGGAATTAGAACATATCCACTCAGAACTCGCCCCGAATCCGGAATAGCCCTAAGGGTGAACCGGGTGGTATACCAAAAATTAATTATTAGTTCGTGGGTGGTCACCTCGAAGTATTAATATGATCGCAAAAAGTCTTTAAATTGGAGAATAGTTGACTTTGGTGATTAAACTTGTTTAGGCTGAAGATGTTAGAAATATATGATATTGTAAAATATTTTTGTGATTAGAATTTCCAAAAGGATATTAACTAA

mRNA sequence

ATTGCAGAATAATTTGAACCTGAAACATACATACACAGATCCTTAGTTTTAACCATTAGATCAAAATCGCATTAGTATAGATGATAATAGTAGATTTAGCATGACAACTCCAATACAAAATTACACGGATTAGTGAGACGTGTCTATTTAAACGAGTAAAACACGAATTGATTCACTCCCTATCGGGTTATAACTAGATTTTCTTATTAACCGAAAAGACATTCTGGATTATAATTTTATTTTTAAAAGTTAAAAGGTTCAGACATTCTTGATTCTTCAGTTTCCAAATAAATCGAAGAAAGAAGTAGATGCCACAGAGTATTGTTCTTCCCCGTAAAACAATAAATAAATCGGTTTTGAAGGAAGAAAAGGTCATTGCCCCATTTCCTGTCCCAAAATCCAGACAATATTTTGATCTTTCGAAATTGGTTGATGAAAGAAGGTGGAAGTATGTGATCATCCCATTCAACCCAACGCAACTTTATAATCTGGGCATTCTACATAGTACGAATCATATGATTGATGATATGGAACAAGAACTGAGAGTTGCTTCCATTGTTGATACTAGATTTCCCGGTAAGAACAAAGACTCAAGACCAAAACCAGACCCCCATCGACCTCTTTTGTTTACTGCAAAGGAACTTAGTTCCAGCATCATAGCCTCAGAAAGTACACGTACCATATGTTCTGTTTCAGTAGCTCTGCTAGTGGTTCTATCTTTCATCGATTATCCCTTACTTGGAATTAATATCGTGAATTCAAAGAGCATCATTGCTTTGAGGCCACTATATATGCTGTTAGTGACAGAATTCACTGTCATAATTTCATACCTTGTTTTAGAAAGACGAAATTCTGTATCATTTGAAGAAGATAGAAAGGGTTCAAAGGGAGGTGGAGTTAATTGGGAAAGAGCAGAGTTTCTGTTAGAGGGAGGTGTTGTGTTTCATCAAACGAATTTCCAAAAGGATATTAACTAA

Coding sequence (CDS)

ATGCCACAGAGTATTGTTCTTCCCCGTAAAACAATAAATAAATCGGTTTTGAAGGAAGAAAAGGTCATTGCCCCATTTCCTGTCCCAAAATCCAGACAATATTTTGATCTTTCGAAATTGGTTGATGAAAGAAGGTGGAAGTATGTGATCATCCCATTCAACCCAACGCAACTTTATAATCTGGGCATTCTACATAGTACGAATCATATGATTGATGATATGGAACAAGAACTGAGAGTTGCTTCCATTGTTGATACTAGATTTCCCGGTAAGAACAAAGACTCAAGACCAAAACCAGACCCCCATCGACCTCTTTTGTTTACTGCAAAGGAACTTAGTTCCAGCATCATAGCCTCAGAAAGTACACGTACCATATGTTCTGTTTCAGTAGCTCTGCTAGTGGTTCTATCTTTCATCGATTATCCCTTACTTGGAATTAATATCGTGAATTCAAAGAGCATCATTGCTTTGAGGCCACTATATATGCTGTTAGTGACAGAATTCACTGTCATAATTTCATACCTTGTTTTAGAAAGACGAAATTCTGTATCATTTGAAGAAGATAGAAAGGGTTCAAAGGGAGGTGGAGTTAATTGGGAAAGAGCAGAGTTTCTGTTAGAGGGAGGTGTTGTGTTTCATCAAACGAATTTCCAAAAGGATATTAACTAA

Protein sequence

MPQSIVLPRKTINKSVLKEEKVIAPFPVPKSRQYFDLSKLVDERRWKYVIIPFNPTQLYNLGILHSTNHMIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQTNFQKDIN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24610.1	Spo24610.1	mRNA

Homology

[Close]

BLAST of Spo24610.1 vs. NCBI nr
Match: gi|902190249|gb|KNA11573.1| (hypothetical protein SOVF_133860 [Spinacia oleracea])

HSP 1 Score: 277.7 bits (709), Expect = 1.800e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


		  
Query: 70  MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS 129
           MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS
Sbjct: 1   MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS 60

Query: 130 VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR 189
           VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR
Sbjct: 61  VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR 120

Query: 190 KGSKGGGVNWERAEFLLEGGVVFHQT 216
           KGSKGGGVNWERAEFLLEGGVVFHQT
Sbjct: 121 KGSKGGGVNWERAEFLLEGGVVFHQT 146

[Close]

BLAST of Spo24610.1 vs. NCBI nr
Match: gi|590618740|ref|XP_007024130.1| (Uncharacterized protein TCM_028718 [Theobroma cacao])

HSP 1 Score: 102.1 bits (253), Expect = 1.300e-18
Identity = 56/125 (44.80%), Postives = 87/125 (69.60%), Query Frame = 1


		  
Query: 92  NKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNS 151
           N +   KP  ++P  F++  L+S IIASE TR+ C++ +AL V+LS+IDYPLLG+NIV S
Sbjct: 197 NLEPLQKPCRNQPNFFSSNRLNSCIIASERTRSFCALLIALFVLLSYIDYPLLGMNIVRS 256

Query: 152 KSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDRK-GSKGGGVNWERAEFLLEGGV 211
           +SI+A RPLY++L+T+ TV++  + L+++      E++K GS+    +W  A  LLE G+
Sbjct: 257 ESIVASRPLYIILLTDLTVVLGQMFLDKKGDSEEAENKKAGSQNNRQSWAGAVKLLERGL 316

Query: 212 VFHQT 216
           V +QT
Sbjct: 317 VAYQT 321

[Close]

BLAST of Spo24610.1 vs. NCBI nr
Match: gi|566160981|ref|XP_006385474.1| (hypothetical protein POPTR_0003s05400g [Populus trichocarpa])

HSP 1 Score: 99.0 bits (245), Expect = 1.100e-17
Identity = 57/114 (50.00%), Postives = 81/114 (71.05%), Query Frame = 1


		  
Query: 103 RPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYM 162
           +P  F++K ++S IIAS+ +R ICS+ +A LV++S+IDYPLLGINIV+S+SIIA RPLY+
Sbjct: 138 KPNFFSSKRINSCIIASQRSRVICSLIIASLVLISYIDYPLLGINIVSSESIIASRPLYI 197

Query: 163 LLVTEFTVIISYLVLERRN--SVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQ 215
           +L+T+ T+++  L  ER N  S   E +R  SK  G NW  A  LLE G+  +Q
Sbjct: 198 VLLTDVTIVLVRLFRERGNHGSEESERERMVSKEDGDNWVGAVKLLERGLTVYQ 251

[Close]

BLAST of Spo24610.1 vs. NCBI nr
Match: gi|743915339|ref|XP_011001619.1| (PREDICTED: uncharacterized protein LOC105108848 [Populus euphratica])

HSP 1 Score: 98.2 bits (243), Expect = 1.900e-17
Identity = 56/114 (49.12%), Postives = 81/114 (71.05%), Query Frame = 1


		  
Query: 103 RPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYM 162
           +P  F++K ++S IIAS+ +R ICS+ +A LV++S+IDYPLLGINIV+S+SIIA RPLY+
Sbjct: 147 KPNFFSSKRINSCIIASQRSRVICSLIIASLVLISYIDYPLLGINIVSSESIIASRPLYI 206

Query: 163 LLVTEFTVIISYLVLERRN--SVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQ 215
           +L+T+ T+++  L  ER N  +   E +R  SK  G NW  A  LLE G+  +Q
Sbjct: 207 VLLTDVTIVLVRLFRERGNHGTEESERERMVSKEDGDNWVGAVKLLERGLAMYQ 260

[Close]

BLAST of Spo24610.1 vs. NCBI nr
Match: gi|645244637|ref|XP_008228514.1| (PREDICTED: uncharacterized protein LOC103327918 [Prunus mume])

HSP 1 Score: 95.1 bits (235), Expect = 1.600e-16
Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 1


		  
Query: 103 RPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYM 162
           R   FT+K L+S I+ SES R  C++ +A LVVLS++DY L G+N+V S+S++A RPLY+
Sbjct: 146 RARFFTSKRLNSCIVESESMRIFCALIIAFLVVLSYVDYALFGVNLVKSESVVASRPLYI 205

Query: 163 LLVTEFTVIISYLVLERRNSVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQ 215
           +L+T+ T++++ ++L RR  V  EE+R      G NW  A  LLE G+V +Q
Sbjct: 206 ILLTDVTIVLARMILVRREDV--EEERVVVPQDGHNWVEAVKLLERGLVVYQ 255

[Close]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXX7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_133860 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.200e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


		  
Query: 70  MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS 129
           MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS
Sbjct: 1   MIDDMEQELRVASIVDTRFPGKNKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVS 60

Query: 130 VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR 189
           VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR
Sbjct: 61  VALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDR 120

Query: 190 KGSKGGGVNWERAEFLLEGGVVFHQT 216
           KGSKGGGVNWERAEFLLEGGVVFHQT
Sbjct: 121 KGSKGGGVNWERAEFLLEGGVVFHQT 146

[Close]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Match: A0A061GC87_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_028718 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.200e-19
Identity = 56/125 (44.80%), Postives = 87/125 (69.60%), Query Frame = 1


		  
Query: 92  NKDSRPKPDPHRPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNS 151
           N +   KP  ++P  F++  L+S IIASE TR+ C++ +AL V+LS+IDYPLLG+NIV S
Sbjct: 197 NLEPLQKPCRNQPNFFSSNRLNSCIIASERTRSFCALLIALFVLLSYIDYPLLGMNIVRS 256

Query: 152 KSIIALRPLYMLLVTEFTVIISYLVLERRNSVSFEEDRK-GSKGGGVNWERAEFLLEGGV 211
           +SI+A RPLY++L+T+ TV++  + L+++      E++K GS+    +W  A  LLE G+
Sbjct: 257 ESIVASRPLYIILLTDLTVVLGQMFLDKKGDSEEAENKKAGSQNNRQSWAGAVKLLERGL 316

Query: 212 VFHQT 216
           V +QT
Sbjct: 317 VAYQT 321

[Close]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Match: U5GLN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s05400g PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.800e-18
Identity = 57/114 (50.00%), Postives = 81/114 (71.05%), Query Frame = 1


		  
Query: 103 RPLLFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYM 162
           +P  F++K ++S IIAS+ +R ICS+ +A LV++S+IDYPLLGINIV+S+SIIA RPLY+
Sbjct: 138 KPNFFSSKRINSCIIASQRSRVICSLIIASLVLISYIDYPLLGINIVSSESIIASRPLYI 197

Query: 163 LLVTEFTVIISYLVLERRN--SVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQ 215
           +L+T+ T+++  L  ER N  S   E +R  SK  G NW  A  LLE G+  +Q
Sbjct: 198 VLLTDVTIVLVRLFRERGNHGSEESERERMVSKEDGDNWVGAVKLLERGLTVYQ 251

[Close]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Match: A0A067EBJ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021998mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.100e-15
Identity = 56/163 (34.36%), Postives = 99/163 (60.74%), Query Frame = 1


		  
Query: 71  IDDMEQELRVASIVDTRFPGKNKDSRPKPDPH-----------------RPLLFTAKELS 130
           +D    +    S+ +     ++  S+P+P+P                  +P+LF+ K+++
Sbjct: 120 VDPQVPKYDAKSVNEVAAADESTKSQPEPEPMPAAPIVEKPSNDTELLPKPILFSCKQIN 179

Query: 131 SSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIIS 190
           S IIAS+  R++C++ +ALLVVLS+ID  LLGINIV+S+S+ ALRPLY+LL+T+ T++++
Sbjct: 180 SCIIASQGIRSLCALLIALLVVLSYIDDALLGINIVSSESVEALRPLYILLLTDVTIVLA 239

Query: 191 YLVL-ERRNSVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQT 216
            + L +++ S   E++    +  G N  +A  L+E  +V +QT
Sbjct: 240 QVFLKQQKQSEEAEKENVEPQEDGNNMTQAIQLMERSLVVYQT 282

[Close]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Match: V4SI22_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027012mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.100e-15
Identity = 57/163 (34.97%), Postives = 98/163 (60.12%), Query Frame = 1


		  
Query: 71  IDDMEQELRVASIVDTRFPGKNKDSRPKPDPH-----------------RPLLFTAKELS 130
           +D    +    S+ +     ++  SRP+P+P                  +P LF+ K+++
Sbjct: 89  VDPQVPKYDAKSVNEVAAADESTKSRPEPEPMPAAPIVEKPSNDTELLPKPNLFSCKQIN 148

Query: 131 SSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIALRPLYMLLVTEFTVIIS 190
           S IIAS+  R++C++ +ALLVVLS+ID  LLGINIV+S+S+ ALRPLY+LL+T+ T++++
Sbjct: 149 SCIIASQGIRSLCALMIALLVVLSYIDDALLGINIVSSESVEALRPLYILLLTDVTIVLA 208

Query: 191 YLVL-ERRNSVSFEEDRKGSKGGGVNWERAEFLLEGGVVFHQT 216
            + L +++ S   E++    +  G N  +A  L+E  +V +QT
Sbjct: 209 QVFLKQQKQSEEAEKENVEPQEDGNNMTQAIQLMERSLVVYQT 251

[Close]

BLAST of Spo24610.1 vs. TAIR (Arabidopsis)
Match: AT1G52343.1 (unknown protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.100e-14
Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 1


		  
Query: 98  KPDPHRPL-LFTAKELSSSIIASESTRTICSVSVALLVVLSFIDYPLLGINIVNSKSIIA 157
           K    RP+  F++K+L++SII+SE TR++ S+++A  VVL      L  +NI +S +I+A
Sbjct: 110 KSQNQRPICFFSSKKLNASIISSERTRSLSSLTIAAFVVL------LPRLNITSSNTILA 169

Query: 158 LRPLYMLLVTEFTVIISYLVLERRN---SVSFEEDRKGSKG-GGVNWERAEFLLEGGVVF 215
           LRPL++L++T+  +++S+L  E      S   EED KG  G  G NW  AE LLE GVV 
Sbjct: 170 LRPLWLLILTDCAIVMSHLTTEASGGGLSHEMEEDGKGRDGNNGENWSDAERLLERGVVV 225

The following BLAST results are available for this feature:

BLAST of Spo24610.1 vs. NCBI nr
BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
BLAST of Spo24610.1 vs. ExPASy Swiss-Prot
BLAST of Spo24610.1 vs. TAIR (Arabidopsis)

BLAST of Spo24610.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902190249\|gb\|KNA11573.1\|	1.8e-71	100.	hypothetical protein SOVF_1338...	[more]
gi\|590618740\|ref\|XP_007024130.1\|	1.3e-18	44.8	Uncharacterized protein TCM_02...	[more]
gi\|566160981\|ref\|XP_006385474.1\|	1.1e-17	50.0	hypothetical protein POPTR_000...	[more]
gi\|743915339\|ref\|XP_011001619.1\|	1.9e-17	49.1	PREDICTED: uncharacterized pro...	[more]
gi\|645244637\|ref\|XP_008228514.1\|	1.6e-16	45.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24610.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXX7_SPIOL	1.2e-71	100.	Uncharacterized protein OS=Spi...	[more]
A0A061GC87_THECC	9.2e-19	44.8	Uncharacterized protein OS=The...	[more]
U5GLN1_POPTR	7.8e-18	50.0	Uncharacterized protein OS=Pop...	[more]
A0A067EBJ1_CITSI	2.1e-15	34.3	Uncharacterized protein OS=Cit...	[more]
V4SI22_9ROSI	2.1e-15	34.9	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo24610.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24610.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G52343.1	2.1e-14	42.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35469	FAMILY NOT NAMED	coord: 74..215 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006621	protein retention in ER lumen
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046923	ER retention sequence binding
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09938	0.71	Barchart \| Table
Spo05901	0.68	Barchart \| Table
Spo10820	0.66	Barchart \| Table
Spo01928	0.65	Barchart \| Table