Spo24673 (gene) | SpinachBase

Overview


Name	Spo24673
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RmlC-like cupins superfamily protein
Location	chr4 : 18001891 .. 18002980 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCATATCTCTTTAATTTTTTTCACACATGATTATTTTTTTTCTTTCTCACTTATCCCACTTTAATGTTTTCAATTATTTTCCTTTTTCTTCTTGTCCCCCTTCTTTCTCAACTCTCTCCTATGTCATTATAAATACACCAAAGGCAAACATATCTACCCTTCTTTATATCTTCCTCCTCTTTTCATCTCCTCCTTTGAAAACAGAAAATTAATTTTTTTTCAATTAAAAAAACAGAATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAGTATGTATCATTCTCTTTAATTACTTTTTGAGAACTAAATTATCATAGATTATGTAAATATAATCTTGTTTTTATATGCTAATCTATTCTAACCATAAATACAAGATTATATTTACATAATCCTTCACTAAAATTATTTGATTTTGTTTTTCTACTCTGTACGAGTACAGAGTTAATTAATAATAGTCACGCTGATAGTGTAATTTGAATTTGTGCAGATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAATTCATACTTTTAATTAGCATAGTAATTAATTAACATAATTAATCTTTTTTTATGTTGCGTTGTGTTCAGAAAGTATTTTTACTTGGTTAATTATTACGTACTCTCTCCGTTTCTAAATATTTGTCGTTGTAGGGACGGAGTAGATCTTAAGTTAAGTTTATGTATGTGTTCCAAGAATCTTGGAAATATTATTACAAAAGTAATTAGTCAAAGTTTTTTTTTCCCACTTAATTATTGTTTTAAATTTTTCAGTTTGTATAAGTTGTGAAATCAAGACAATTTGAATGGAGTAGCATTTATATGGAGTTTGAAT

mRNA sequence

TTTCATATCTCTTTAATTTTTTTCACACATGATTATTTTTTTTCTTTCTCACTTATCCCACTTTAATGTTTTCAATTATTTTCCTTTTTCTTCTTGTCCCCCTTCTTTCTCAACTCTCTCCTATGTCATTATAAATACACCAAAGGCAAACATATCTACCCTTCTTTATATCTTCCTCCTCTTTTCATCTCCTCCTTTGAAAACAGAAAATTAATTTTTTTTCAATTAAAAAAACAGAATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAATTCATACTTTTAATTAGCATAGTAATTAATTAACATAATTAATCTTTTTTTATGTTGCGTTGTGTTCAGAAAGTATTTTTACTTGGTTAATTATTACGTACTCTCTCCGTTTCTAAATATTTGTCGTTGTAGGGACGGAGTAGATCTTAAGTTAAGTTTATGTATGTGTTCCAAGAATCTTGGAAATATTATTACAAAAGTAATTAGTCAAAGTTTTTTTTTCCCACTTAATTATTGTTTTAAATTTTTCAGTTTGTATAAGTTGTGAAATCAAGACAATTTGAATGGAGTAGCATTTATATGGAGTTTGAAT

Coding sequence (CDS)

ATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAA

Protein sequence

MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24673.1	Spo24673.1	mRNA

Homology

[Close]

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|902159051|gb|KNA06294.1| (hypothetical protein SOVF_182440 [Spinacia oleracea])

HSP 1 Score: 229.2 bits (583), Expect = 3.400e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

		  
Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY
Sbjct: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
           PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP
Sbjct: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 106

[Close]

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|731326891|ref|XP_010674248.1| (PREDICTED: uncharacterized protein LOC104890448 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 2.900e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1

		  
Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTS SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGK+TLKYDATETCYFVRG+VKAY
Sbjct: 1   MGTTSGSNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKITLKYDATETCYFVRGRVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             +KGST+D+  VEFGAGDVVIFPKGLSCIWDVSVAVDK+YKFDPP
Sbjct: 61  --SKGSTSDD-AVEFGAGDVVIFPKGLSCIWDVSVAVDKYYKFDPP 103

[Close]

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|703120844|ref|XP_010102191.1| (hypothetical protein L484_024472 [Morus notabilis])

HSP 1 Score: 162.5 bits (410), Expect = 3.900e-37
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK-N 64
           S  N+KIIVE NPS +RLSELGI SWPKWGCPPGK  LK+DA+ETCY ++GKVK YPK +
Sbjct: 10  SSPNLKIIVESNPSSSRLSELGINSWPKWGCPPGKFILKFDASETCYLLKGKVKVYPKGS 69

Query: 65  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             S++D   VEFGAGD+VI PKGLSC WD+ VAVDK+YKFD P
Sbjct: 70  SSSSSDHEFVEFGAGDLVIIPKGLSCTWDILVAVDKYYKFDSP 112

[Close]

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|225437941|ref|XP_002268868.1| (PREDICTED: uncharacterized protein LOC100241271 [Vitis vinifera])

HSP 1 Score: 162.2 bits (409), Expect = 5.100e-37
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++SN +IIVEKNPSE+RLSELGIKSWPKWGC PGK  LK+DA ETCY ++GKVKAYPK  
Sbjct: 3   ADSNQRIIVEKNPSESRLSELGIKSWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGY 62

Query: 65  GSTNDEG-VVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            +  DEG  VEFGAGD+VI P+GLSC WDVSVAVDK YKF+
Sbjct: 63  SANEDEGCCVEFGAGDLVILPRGLSCTWDVSVAVDKHYKFE 103

[Close]

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|694410266|ref|XP_009379734.1| (PREDICTED: uncharacterized protein LOC103968120 [Pyrus x bretschneideri])

HSP 1 Score: 161.4 bits (407), Expect = 8.700e-37
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1

		  
Query: 7   SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK---N 66
           SN++I+VE NPS++RLSELGI SWPKWGCPPGK TLK+DA ETCY V+GKVK YP+   +
Sbjct: 15  SNLRIVVESNPSDSRLSELGINSWPKWGCPPGKYTLKFDAAETCYLVKGKVKVYPRKGSS 74

Query: 67  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
             S++DE  V FGAGD+V  PKGLSCIWDVSVA+DK YKFD
Sbjct: 75  SSSSSDEEFVNFGAGDLVTIPKGLSCIWDVSVAIDKHYKFD 115

[Close]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG82_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182440 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.400e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

		  
Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY
Sbjct: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
           PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP
Sbjct: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 106

[Close]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPD7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077310 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1

		  
Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTS SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGK+TLKYDATETCYFVRG+VKAY
Sbjct: 1   MGTTSGSNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKITLKYDATETCYFVRGRVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             +KGST+D+  VEFGAGDVVIFPKGLSCIWDVSVAVDK+YKFDPP
Sbjct: 61  --SKGSTSDD-AVEFGAGDVVIFPKGLSCIWDVSVAVDKYYKFDPP 103

[Close]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: W9RQL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024472 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.700e-37
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK-N 64
           S  N+KIIVE NPS +RLSELGI SWPKWGCPPGK  LK+DA+ETCY ++GKVK YPK +
Sbjct: 10  SSPNLKIIVESNPSSSRLSELGINSWPKWGCPPGKFILKFDASETCYLLKGKVKVYPKGS 69

Query: 65  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             S++D   VEFGAGD+VI PKGLSC WD+ VAVDK+YKFD P
Sbjct: 70  SSSSSDHEFVEFGAGDLVIIPKGLSCTWDILVAVDKYYKFDSP 112

[Close]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: D7U396_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g04620 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.600e-37
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++SN +IIVEKNPSE+RLSELGIKSWPKWGC PGK  LK+DA ETCY ++GKVKAYPK  
Sbjct: 3   ADSNQRIIVEKNPSESRLSELGIKSWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGY 62

Query: 65  GSTNDEG-VVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            +  DEG  VEFGAGD+VI P+GLSC WDVSVAVDK YKF+
Sbjct: 63  SANEDEGCCVEFGAGDLVILPRGLSCTWDVSVAVDKHYKFE 103

[Close]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A068U5Q3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016297001 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.700e-36
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           S SN++IIV+KNPSE++LSELGIKSWPKWGC PGK  LK+DA +TCY +RG+VK YPKN 
Sbjct: 9   SSSNLRIIVQKNPSESQLSELGIKSWPKWGCSPGKYQLKFDARQTCYLLRGRVKVYPKNS 68

Query: 65  GSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
                  VVEFGAGD+VI PKGLSC WDVSVAVDK YKFD
Sbjct: 69  SE-----VVEFGAGDLVIIPKGLSCTWDVSVAVDKHYKFD 103

[Close]

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G28703.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 9.600e-34
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++ N +IIVE+NPS+ARL EL  KSWPKWGC PGK  LKY+A E CY +RGKVK YPK  
Sbjct: 2   ADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPP 61

Query: 65  GSTND----EGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKF 104
            S++     E  VEFGAGD+V FPKGLSC WDVS++VDK Y F
Sbjct: 62  PSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104

[Close]

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT3G04300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.400e-32
Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 1

		  
Query: 9   IKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTN 68
           + I++E NPS  RLS+LG+ SWPKW C PGK  L ++  ETCY V+GKVK YP  KGS+ 
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYP--KGSSE 60

Query: 69  DEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
               VEFGAGD+V  PKGLSC WDVS+ +DK YKFDPP
Sbjct: 61  ---FVEFGAGDLVTIPKGLSCTWDVSLFIDKHYKFDPP 93

[Close]

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 4.500e-31
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1

		  
Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           S   + I +EKNP E++L++LG++SWPKWGCPP K    Y A ETCY ++GKVK YP   
Sbjct: 40  STEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNG- 99

Query: 65  GSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
              +DEG VE  AGD V+FPKG+SC WDVSVAVDK Y+F+
Sbjct: 100 ---SDEG-VEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134

[Close]

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10280.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.100e-16
Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 1

		  
Query: 4   TSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKN 63
           T    +KI+  +  S+ +L++LG+ SWPKW   P K   ++  TET YF+ GKVK     
Sbjct: 43  TEIHGVKIL--RQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKV--NV 102

Query: 64  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            G   +E   E G GDVV+FPK +  +W+++ AV K Y  +
Sbjct: 103 DGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLE 139

[Close]

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10290.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 1.600e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 1

		  
Query: 13  VEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTNDEGV 72
           V +  S+A+L+ELG+ SW  W   P K   K+  TET YFV GK+K   K +    +   
Sbjct: 22  VMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKV--KVEDHHKEGEA 81

Query: 73  VEFGAGDVVIFPKGLSCIWDVSVAVDKFY 102
           +EF AGD+V+FP+ ++   DV   V K Y
Sbjct: 82  LEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108

The following BLAST results are available for this feature:

BLAST of Spo24673.1 vs. NCBI nr
BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
BLAST of Spo24673.1 vs. ExPASy Swiss-Prot
BLAST of Spo24673.1 vs. TAIR (Arabidopsis)

BLAST of Spo24673.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902159051\|gb\|KNA06294.1\|	3.4e-57	100.	hypothetical protein SOVF_1824...	[more]
gi\|731326891\|ref\|XP_010674248.1\|	2.9e-48	89.6	PREDICTED: uncharacterized pro...	[more]
gi\|703120844\|ref\|XP_010102191.1\|	3.9e-37	69.9	hypothetical protein L484_0244...	[more]
gi\|225437941\|ref\|XP_002268868.1\|	5.1e-37	73.2	PREDICTED: uncharacterized pro...	[more]
gi\|694410266\|ref\|XP_009379734.1\|	8.7e-37	70.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QG82_SPIOL	2.4e-57	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CPD7_BETVU	2.0e-48	89.6	Uncharacterized protein OS=Bet...	[more]
W9RQL7_9ROSA	2.7e-37	69.9	Uncharacterized protein OS=Mor...	[more]
D7U396_VITVI	3.6e-37	73.2	Putative uncharacterized prote...	[more]
A0A068U5Q3_COFCA	6.7e-36	72.0	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo24673.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G28703.1	9.6e-34	63.1	RmlC-like cupins superfamily p...	[more]
AT3G04300.1	2.4e-32	61.2	RmlC-like cupins superfamily p...	[more]
AT4G10300.1	4.5e-31	58.0	RmlC-like cupins superfamily p...	[more]
AT4G10280.1	1.1e-16	38.6	RmlC-like cupins superfamily p...	[more]
AT4G10290.1	1.6e-12	40.4	RmlC-like cupins superfamily p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	Domain of unknown function DUF861, cupin-3	PFAM	PF05899	Cupin_3	coord: 23..101 score: 2.1
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 20..101 score: 2.37
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 4..103 score: 2.0
None	No IPR available	PANTHER	PTHR33271	FAMILY NOT NAMED	coord: 6..106 score: 3.4
None	No IPR available	PANTHER	PTHR33271:SF3	CUPIN DOMAIN-CONTAINING PROTEIN	coord: 6..106 score: 3.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046373	L-arabinose metabolic process
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009651	response to salt stress
biological_process	GO:0010118	stomatal movement
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0009744	response to sucrose
biological_process	GO:0015716	organic phosphonate transport
biological_process	GO:0015748	organophosphate ester transport
biological_process	GO:0010114	response to red light
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0006558	L-phenylalanine metabolic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0009056	catabolic process
biological_process	GO:0070417	cellular response to cold
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0000188	inactivation of MAPK activity
biological_process	GO:0034053	modulation by symbiont of host defense-related programmed cell death
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0010193	response to ozone
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0010214	seed coat development
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0006887	exocytosis
biological_process	GO:0007030	Golgi organization
biological_process	GO:0046909	obsolete intermembrane transport
biological_process	GO:0010218	response to far red light
biological_process	GO:0009741	response to brassinosteroid
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0033358	UDP-L-arabinose biosynthetic process
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
biological_process	GO:0006457	protein folding
biological_process	GO:0005992	trehalose biosynthetic process
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0097503	sialylation
biological_process	GO:0045227	capsule polysaccharide biosynthetic process
biological_process	GO:0006333	chromatin assembly or disassembly
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0048653	anther development
biological_process	GO:0048508	embryonic meristem development
biological_process	GO:0009942	longitudinal axis specification
biological_process	GO:0009945	radial axis specification
biological_process	GO:0042372	phylloquinone biosynthetic process
biological_process	GO:0042335	cuticle development
biological_process	GO:0006810	transport
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0009638	phototropism
biological_process	GO:0007155	cell adhesion
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0009903	chloroplast avoidance movement
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0019530	taurine metabolic process
biological_process	GO:0010362	negative regulation of anion channel activity by blue light
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006027	glycosaminoglycan catabolic process
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0048767	root hair elongation
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0009987	cellular process
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0006396	RNA processing
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0061025	membrane fusion
biological_process	GO:0010200	response to chitin
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0009749	response to glucose
biological_process	GO:0048364	root development
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007165	signal transduction
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009249	protein lipoylation
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0046339	diacylglycerol metabolic process
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0006218	uridine catabolic process
biological_process	GO:0016441	posttranscriptional gene silencing
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0006152	purine nucleoside catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0015031	protein transport
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0016049	cell growth
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0010035	response to inorganic substance
biological_process	GO:0051179	localization
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0015798	myo-inositol transport
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0098734	macromolecule depalmitoylation
biological_process	GO:0044206	UMP salvage
biological_process	GO:0016310	phosphorylation
biological_process	GO:0044211	CTP salvage
biological_process	GO:0032482	Rab protein signal transduction
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009341	beta-galactosidase complex
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0009898	cytoplasmic side of plasma membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009986	cell surface
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0016020	membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005768	endosome
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0048046	apoplast
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0009536	plastid
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005618	cell wall
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008076	voltage-gated potassium channel complex
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0010494	cytoplasmic stress granule
cellular_component	GO:0005835	fatty acid synthase complex
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0072585	xanthosine nucleotidase activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0009882	blue light photoreceptor activity
molecular_function	GO:0005249	voltage-gated potassium channel activity
molecular_function	GO:0016295	myristoyl-[acyl-carrier-protein] hydrolase activity
molecular_function	GO:0045437	uridine nucleosidase activity
molecular_function	GO:0047724	inosine nucleosidase activity
molecular_function	GO:0004320	oleoyl-[acyl-carrier-protein] hydrolase activity
molecular_function	GO:0047622	adenosine nucleosidase activity
molecular_function	GO:0016296	palmitoyl-[acyl-carrier-protein] hydrolase activity
molecular_function	GO:0008474	palmitoyl-(protein) hydrolase activity
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0004000	adenosine deaminase activity
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005366	myo-inositol:proton symporter activity
molecular_function	GO:0033858	N-acetylgalactosamine kinase activity
molecular_function	GO:0005057	obsolete signal transducer activity, downstream of receptor
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0009045	xylose isomerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004849	uridine kinase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0046556	alpha-L-arabinofuranosidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
molecular_function	GO:0004435	phosphatidylinositol phospholipase C activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0004335	galactokinase activity
molecular_function	GO:0009702	L-arabinokinase activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0008253	5'-nucleotidase activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
molecular_function	GO:0047800	cysteamine dioxygenase activity
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0050373	UDP-arabinose 4-epimerase activity
molecular_function	GO:0003978	UDP-glucose 4-epimerase activity
molecular_function	GO:0004805	trehalose-phosphatase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0008373	sialyltransferase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0030527	structural constituent of chromatin
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0004022	alcohol dehydrogenase (NAD) activity
molecular_function	GO:0009044	xylan 1,4-beta-xylosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0033549	MAP kinase phosphatase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0004034	aldose 1-epimerase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0019948	SUMO activating enzyme activity
molecular_function	GO:0015416	ATPase-coupled organic phosphonate transmembrane transporter activity
molecular_function	GO:0047980	hippurate hydrolase activity
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0016992	lipoate synthase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22364	0.78	Barchart \| Table
Spo06829	0.75	Barchart \| Table
Spo22463	0.75	Barchart \| Table
Spo10171	0.73	Barchart \| Table
Spo06859	0.73	Barchart \| Table
Spo00358	0.73	Barchart \| Table
Spo19773	0.73	Barchart \| Table
Spo07623	0.72	Barchart \| Table
Spo18746	0.72	Barchart \| Table
Spo11219	0.72	Barchart \| Table
Spo14130	0.72	Barchart \| Table
Spo22666	0.72	Barchart \| Table
Spo00413	0.71	Barchart \| Table
Spo10752	0.71	Barchart \| Table
Spo05352	0.71	Barchart \| Table
Spo24790	0.71	Barchart \| Table
Spo25787	0.71	Barchart \| Table
Spo25874	0.71	Barchart \| Table
Spo00840	0.71	Barchart \| Table
Spo08254	0.70	Barchart \| Table
Spo06784	0.70	Barchart \| Table
Spo02685	0.70	Barchart \| Table
Spo14032	0.70	Barchart \| Table
Spo20446	0.70	Barchart \| Table
Spo21658	0.70	Barchart \| Table
Spo11035	0.70	Barchart \| Table
Spo18414	0.70	Barchart \| Table
Spo10239	0.70	Barchart \| Table
Spo04546	0.70	Barchart \| Table
Spo04763	0.70	Barchart \| Table
Spo23286	0.69	Barchart \| Table
Spo03027	0.69	Barchart \| Table
Spo23589	0.69	Barchart \| Table
Spo04104	0.69	Barchart \| Table
Spo25873	0.69	Barchart \| Table
Spo22528	0.69	Barchart \| Table
Spo06139	0.69	Barchart \| Table
Spo10581	0.69	Barchart \| Table
Spo10585	0.69	Barchart \| Table
Spo11951	0.69	Barchart \| Table
Spo13479	0.69	Barchart \| Table
Spo02580	0.69	Barchart \| Table
Spo05230	0.68	Barchart \| Table
Spo05124	0.68	Barchart \| Table
Spo08783	0.68	Barchart \| Table
Spo09918	0.68	Barchart \| Table
Spo04433	0.68	Barchart \| Table
Spo10192	0.68	Barchart \| Table
Spo02479	0.68	Barchart \| Table
Spo16321	0.68	Barchart \| Table
Spo22054	0.68	Barchart \| Table
Spo01868	0.68	Barchart \| Table
Spo11193	0.68	Barchart \| Table
Spo04127	0.68	Barchart \| Table
Spo11520	0.68	Barchart \| Table
Spo17911	0.68	Barchart \| Table
Spo13491	0.68	Barchart \| Table
Spo23932	0.68	Barchart \| Table
Spo20114	0.68	Barchart \| Table
Spo27352	0.68	Barchart \| Table
Spo25593	0.68	Barchart \| Table
Spo00750	0.67	Barchart \| Table
Spo05529	0.67	Barchart \| Table
Spo06017	0.67	Barchart \| Table
Spo03575	0.67	Barchart \| Table
Spo01384	0.67	Barchart \| Table
Spo21289	0.67	Barchart \| Table
Spo27082	0.67	Barchart \| Table
Spo30025	0.67	Barchart \| Table
Spo09150	0.67	Barchart \| Table
Spo09499	0.67	Barchart \| Table
Spo24973	0.67	Barchart \| Table
Spo17803	0.67	Barchart \| Table
Spo02252	0.67	Barchart \| Table
Spo12217	0.67	Barchart \| Table
Spo22543	0.67	Barchart \| Table
Spo12594	0.67	Barchart \| Table
Spo14781	0.67	Barchart \| Table
Spo10586	0.67	Barchart \| Table
Spo22506	0.67	Barchart \| Table
Spo10861	0.67	Barchart \| Table
Spo03505	0.67	Barchart \| Table
Spo20749	0.66	Barchart \| Table
Spo00361	0.66	Barchart \| Table
Spo01739	0.66	Barchart \| Table
Spo04348	0.66	Barchart \| Table
Spo04663	0.66	Barchart \| Table
Spo06262	0.66	Barchart \| Table
Spo06344	0.66	Barchart \| Table
Spo06679	0.66	Barchart \| Table
Spo08359	0.66	Barchart \| Table
Spo09062	0.66	Barchart \| Table
Spo09093	0.66	Barchart \| Table
Spo11168	0.66	Barchart \| Table
Spo11911	0.66	Barchart \| Table
Spo12157	0.66	Barchart \| Table
Spo15366	0.66	Barchart \| Table
Spo16482	0.66	Barchart \| Table
Spo17338	0.66	Barchart \| Table
Spo18386	0.66	Barchart \| Table
Spo19788	0.66	Barchart \| Table
Spo19863	0.66	Barchart \| Table
Spo20958	0.66	Barchart \| Table
Spo21332	0.66	Barchart \| Table
Spo22285	0.66	Barchart \| Table
Spo22323	0.66	Barchart \| Table
Spo27224	0.66	Barchart \| Table
Spo22966	0.65	Barchart \| Table
Spo00283	0.65	Barchart \| Table
Spo18932	0.65	Barchart \| Table
Spo23668	0.65	Barchart \| Table
Spo13941	0.65	Barchart \| Table
Spo13107	0.65	Barchart \| Table
Spo09719	0.65	Barchart \| Table
Spo05640	0.65	Barchart \| Table
Spo04989	0.65	Barchart \| Table
Spo04272	0.65	Barchart \| Table
Spo01933	0.65	Barchart \| Table
Spo26850	0.65	Barchart \| Table
Spo01612	0.65	Barchart \| Table
Spo00501	0.65	Barchart \| Table
Spo00735	0.65	Barchart \| Table
Spo21501	0.65	Barchart \| Table