Spo24704 (gene)

Overview
NameSpo24704
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibosomal protein L28
Locationchr4 : 55313358 .. 55322828 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCTTTTTTTCCAACTCCCTTCATTTCCTTCCACTTCCCATATAATTATTTGTACCATAAACAGAACATTATTTTACCTTTCCTTTCTTTTCTTTTTCTTCCAATTCCTCCCAACCAAATAAAGTCTGTTAAACCCCAAATAAATTTCCGCTCTCCTCAAACTCCAATTCGCAGCTGCTCTTCATCTCCTTCCTCCTCTTCCTCCACCATTTTATATTTGCATCACCACCTCTAAACGGCGGCGCTTCCGCCATTGTGGACTTCCAATTTGGAGACTTCCGAACACCACACCTCCTCTGCCGCTACTATTCTCCTGTCGAAGATATTGTATAGCTTCTTTTATTCATGTATTTTCTTCATTATTTTTATTTTGTTTCGGTTTTTGTCAAATTTTGATTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTATTTTATAGATCGAGAAAGTGTGTAAGTACGTTATGTTTGAATATGATGTTTCAAATGATGAAATGTTGATGTTTAATATGGTCTGTTTGTTTTTCTGGCTTTGTTTTGGTGCTGTTTTATGTCTAATTATCTACACCCGTTTCATAATTGTAGTTGAAATCATGTTTTTTGGGGGTTAATTTGTTTTTTCTTTTTTTTGAGGAGGGGGCATGGTAGAAAAGGCCAGTAATTTCAGGCTTAATATAGTTTAGTTTGATTGAATTAGAATTAGTGCAACTTTAAAAAAGAAAAAATTTGAATTCTCGAGCTTGAGGAATTGTAGGTGGTGGTGGTTTTGTCTGTGAGAAAACATTGTATATGTTAGATTCGAACCCCATATGCCTTAAGAAGTTTGAAGATTAAAGGCCTCAATTCCATTGAACCATTTCAACCATTCCTCCTCCTCTGATTAAGGATATTGTAACTGGGAATCACCAAGTCACCACCCAAGGGACGCAGCCCACTTTTACTCGTTTAATTAAGGGTAATTAAATTAAGGTATTGGTTGTAGTTTGGACTATGATATTTGATCTTATTATATGTAATCAATGTAGTAGTCCTATGTTTGAAGTGTTCACCACTGTGTGTATGTAGAACAGTAGAACCATTGTTGATGTTTGTGTTTGGGTTGTTTTTGCGGATACTGGCATTAGCTGAGTCATTCACATTACCCAGCTTCTAATTTTAGGTTATTCATTGAGTGGGATAAGGATAGCTAGCTGAGCCCAACTCAAAATCCTTATTATCTGATGGATTTCTGGATTATTTTCATCTTTTTTTCTAATGTTATGTCAGTTATCAAGAGCATGCTGTCTTAGTTTCTGAATCTGAGTTAGATGGAAAGTTTCGTCATTTGTGAAATGGGTTATTGAAGTTATGTTTTTTTGAAGGTTGATATTTTTCTTAACAACATCAGACTGATTTGTGATATTCAACACACTAGTGAGAGGAAATGGCATTCAGGTCAAAGGAAACAATGAAGAAGATACTGAAGAAAGTCGGAGAAGATAACATTACGAGGGGTGTCAAAGAGGCTTTAACAAAGAACATACCAAATAACAAGGTAGTCATGGGTCGTGCTAAGCGAGGGCTTTTTGCCGGTCGCCATATTCAGTTCGGCAACCAAGTTAGCGAAGACGGAGGCAATAAGTATGCTTTCTGAACATTCCCTTCCCTGCCCTAAATTTGTATATTATGCTTTTGGTTTGTTGTTCAACTTCTTGCTTTTGGTTTGTGCGTTATGTTGCAGTAGTTAGTGTCTGCTAGTGTTACCCTTAGCAACTAGGGGGATGCATACATGTGTCTAAATGTTACTCTGTTGCGAAAATTTTGCATGTCTTTTGTCCAAATTGATGCATGTCAAAGTGCTGAGTATCCCACTTGGGTACTTTAGGTCAAGCAAAGTAGACTGTGTGTAAGGTTTTTGTTTTATATTACTCTTGACTTGGTTAATGATGTAAATACCAGTAAAAAACTTATTAATTTCTAGGAAATGAATCACCTGAACAATTGTGCATGTACTGGTCATATCAACTTTGACTTAAATGTGGTAATAAAATGTATTATGATCCCTTATTTTGATAACTAGGAAAGGAGTTATGTAGAGTAATTATGGGAAAGAATAACAAAACAGAACACACACAATTAGTTGTTGTTAGGATGTTATATTACATATTTCATTGAGTTCAATTTGAGTCCAGTTGATGGTTTACTTAGACCATTATCCTAATACTTATCACTAGTCTCATGTCTATATTTGATTAAGGAGAGCTCAAGTGTGCTAGACTGCTAGGTTACTCTTGCAGTTTGAACACGCTGTTTCAGTTAGCCCTTGATCAGGAAAGCATTTACTTGTTTAGTTGCTCAATGGTGATATTTCAACTTTGTTTAAAGTTTTAAACATTACCTCAAGGCACAAACCAATAATGTTGCAGTAATATGTTGTCTCACGACTTCTTAGTCAACAATATTCATCGGGACGTAAAACTAAAATGTTAGAACTTGTGGAAGGGTGGCACAGGATTTTCCTGTTACAATTGGATTACACCAAGGATCTTCCCTAAGCCCTTTCCTCTTCGCAACGGTTCTGGGCGAAGTAACAAGGTTTATCCAATTAGTGCCTTAGTGTTTTCTATTCGCAGATGATATCATTTTGGTTGGTTCTAAAGTTGGGGTTAATGCAAAGTTAACGCGATGGAGACAAAAACCAGAATTTAGAGGGTTTAGGCTTAGTAGGAGTAAAACAGAACATGGGTTGCTATTTTAGCATTGGGAGGAAGCTAACTAAAGAAGTTGTGACATTGGATGGTAAGGCGTTACCTCTTAGTAATTTCAGATTGATTTCATAGAGTTTTCACAATATAATTCTAGAATAAAGATTTGGTGACTCAAATGGATAGTGTACCTTTAAGGTTAAAAGAGGAATTCTATAGGAAAACAATTAGAGCGGCATTATTATATGGTTAGAATTGGGCATTTAGGAAGAGCACAGTAAAAATATGAGTGTAGTAGAGATGTGCCTGTTGAGATAAATGTGAGGCAATCTGGCAACTCCTCAAGGGATAGAATTAGGAGTGTAGATATTTGAATGATGTTGGAGTTGCGGAAAATATAAGGGACAATCAGTTAAGATGATTTGGACATGTAAGATGCGACTAGTAAATCCACCGGTAAGGAAGTTGGAAGGTTGGGGTAGTAGAGATCACAAACACAATCGAGGAAGGTCACATATGACTTGGATGGAGGGATTAGATACAAGCGAATGGAGGGGGATCTTTGTGGATGACCACATTAGATCAATGTATAAAAAGGCTCAAGGCGCAACAAGGCGATTTGGAGTTCCCAGCGCCTTAGGCGCGCCTCGGTGCGCCTCGGTGCGCCTCATTGAAGTGAGGCGCCCTATTAAAAGTGGAAAAAAAGTGAAAAAATGGTATGTCTCTTGGTAGGTGCGCCTTTTTTGCGCCTTTTTGCGCCTCAAAGTGCGCCTTGGTGCGCCTTTTTGCGCCTTAGGTGCGCCTCATTGAAGTCGCCTCGCCTAGACAATCAAAGGCGCTGGCTCCAATCGCCTTGCGCCTCAGAGCCTAGGCGCGCCTTTTTATACACTGCATTAGATAGATTCTCAATTCATTCATCCGAACCCACCGCTCTTTGGAATGAGGCGATGACTTTTTTGTTGCTGTTGTACAGCTTCCTCATGAGTTTTCAGCTTGTTTGATCAAGTCTAAGATTGTTCTTTTCCCCTCTTTTGTAGTGCATTCTTTAAAGCTTCTGCTATTTTTGCATATTCTCCGACTGACCAATTTTCTTTTAGTGCTTTAGTAGAAAGGTGGGCTGCTTTGGTCTTTTTATAATTTTAAACCTGTCATTGCTATGCCTCCTTTAAAGTTCTTCTAGGCTCTTATGCTGCTCGCCATGATGCCTCTTGCTACATTAGCGTGCAGTTTTTGAAAACATTTTATGTTAGAATGATCATTAATTCAAAAGCCATACACGTCTTATAAGTTATGAGGGAAAATGTGTGAGCTCTAGCCTCTAGCTAGTGAATCTGATTTTTATTAATGAAAATGCTACGCGAGACATACTTTAAATCCGATTTATTTGGTGATATTGTCTATTTTGTTTATGCAAATCTTCATCACTTTATGGAACCTATGTTGAATGTACCTAAAACTGCTAACTGTATCATTAACAAGTGCAGGCATAATGTTCCTTTGAAGATTTATAGGGAATTAGGAATCAAGGTTCTAGAACAAAACATGTATTTCCAAATTTATATTTATGTTCTGTCGGTGAATACATTAGGGATTCACAGTTATTATTTGACAACTAATTCCTTATCCCAATTTAATAGTCATAGGTGCCATTTTAAGATCTTCAGAGTGTTATGTTTTTAGCATAGTTTTCCTTCTTTTCATTATATAAAGCACCCACACTTATTAAGGTTGAACTTTGGCTAATATTCTTTCTCAAATACGAAGTGTATATAGTTATCCAACTTTTAGTAGAGATTATGGAAGTACTTTTCAATATGAAACTAATGGTTTTCTTTTATTCTTTTTGTCAAAATGCGTTGAGGCCTTGAGGGAAATTCATGGCCAAAGTTTGACTTTCGAAAGCATGATTGCCTTACATTAGATTATGAATGAATAAAATTTCATAGCTGTAGATGGGACATACAAAGAGTAGATAATATGCAAAGGCAAGGCATAAGAAGTTGAGAATAGAGGTTGATTTTTTCCTTGCTTAAGACTCTTTCAAGACTCCAGTTTGCCTTCACTCCCCCAGTGCCGAACTTAATGATAATAAAGAGGATATGAACTTAGCTCCTGCTCAACTGTCCCAACTTCCAGTTTATTCATGCCTACTCATGCATGTTGTCTTGAAGGTGTAACGCCCAGTATAATCCTTTTTTCCCCCTCTCGTGAGAATACTTGTCCTTTCAGCCTCCAAATAATCAAGGGAGTAATCCAATTTACAGAAGTGGGGATTCTTTTATCTTCCTACCTATTAAGCACCTGTTTAACTACATTTTTTTAGAAAGGACAAAGTGAAACTGAAGGAAGAGAGGCAATAAAGCATAAAAGACTACAGTTCACTCTAGACTTGTAGATGAAACGTGAGCACATTTCAAAATTTCTTTAAGTTGTAGAAAGGAAGGAGTGAATAGTGTTTAAGTGTCAATGTGTCATCTGCAAACTAAAAAGTTGGATGGTGATGTCGTCTTACCTTTACTTGAAATAAGCAATAGGTTCTGTTCATCGGTTCCTTGAAGATTTATACATACAATTCAAAATATTCACCATTTCCTGAAAAGGGAAAAATATGTGATTCTTAAATTTCAAGATCTTGTGAAGCATTGAAAGATCTTCATGGATTGGCCATCAGTTAAATGTAAAGGCTAGTTGGGTGGTGCATCCTTGAGTCAATGCCCTTTCATGGCTTAATATAACTCAAATGCTCCGAACTCTGTAGGAGCTCTAAATTGATACCGTTATGCCCTTTCTTTAAATGTTGTCCACCTCAGTTCCTCATTGGCGAGATGGTGACTGAGCTCCAAATCAAATCTGACTCATCTTACGGGATCACTTTCTTCCTTAAAGATGATACTAAATACCGATTTTATCTGGACACAACTATATTACACTCCACCTCACTCTAGGGGTGAACAAACCAAGTTCTGAACTGGAAAGCGTAAAGAAGTTCAACTAGTTTTTGAGATTCAGGACAGTAACCGGTATAGAGTCTAGGAAGTCAATATTAATACAAATTTTCATATATTAGTTACATATTTAAGCATGATAGCAACCCATATTATGCATCTCCAACAATGTCTTTAAGCCATACATAAAGGATTGACATATTGGATCCCATGAGATGCGTTGTTATAGAAGAAATTCGTATGTAGGCTTTCAGAGAGAAGTCCCAGTTTCCTAGATCTGTTAGCTGAAAATATTTATAGATAGAATGAAACCCACCATGTCCAGAGTCAAAATGCTGCGGTTTTCGTCCAAGAAGCTCAGGCGAGTTGATCAACTTGGTTGATGCTTTAGTGATCATCTCCAGTAACTGTTGCCCTTTCTTCTCAATGATGCTTTCCTTCTTATCTTGCTCGTCAATTTATTTTTCTGATCCCTTGGGTTTTACATTTGAAGTTTAGATATCATATTGGGCTTTTAGCTAAGCTTCTCATTGTTTAGTTAGTTTCCATGTCTTTTCTTCTGTGCAAGATGTGACGGTTTTTATTTCTACATACTCATACTCCGTAATATTGTAAGTAGGTTGAGAGACTTGAGGTGTGAATATTATTTTATGTATGGCGTGTCTTGTGTCCTGTAACTGAATGTAGGGTTCAGTCACATTGTCTTAAAAATATGAGCTGATCAGTTCCAGTACAATTACATAGCCAAACACTACACAACTTAGTCTTGTGAAGAGTAGTCCTCTCTATTTTTGTTAGTAATCCTTTTTGTGTGTAACATCGCCATGCCCTTTGGCAGCATTTACTATTTTAAGTTGAAATCACATTTTGACCTGGATGTTTTTAGGCTCCCCTAACTACCCACAAATGGTCAACATTTAGTTTGGACGTTAGTGAATTTGAGGAATTTACCTTGGTGTGCAAAGATCAAAGACACGTCGTTGTTGTACTTGTTATCACACTCCTGGTAAATACCGGGTATCCAACAAGATGAATGCTCTCCTATTCAAACTTCTGGAGAGTCGCTGATAACAGAGTCAAGGACACACCGAACACTGAATATTTTCCCTTGTTGGGATGTAATAATACCCTATCATATTTCCCTTTTGCCACTATAGCAACAAAATATTGGTTGAGTCCAACTCTTCGTACTATCCAGTGACAAGATTGTAGTTATTCTAATCATTTATTTTTAGTAGCTAAAGTAATGATAATGGAATCCATGCTTCCTCTATGCATTCAGGGTTCTTGTAAAGCTTTCACTAATATCATTTCGTTCTTTTCAACAGTTCTACCAGATGTTCTCTTCTTTTGTTCTCCTTTGTCTCTGTCACTAGCCTATCCTTTATTCCTTTTGCTCACCATCTTTGGGATTTGCTTCACTCTCTACCCAGTTCTCTTCCATTTTCTGCCTGGAAGTCTTCTCATTGGGATCAGGGTTGCCAGGTGTTGTATGAAGCTTACTATGCCTCTACTTGGTCCAAAACGTCGCACTATTTAATCCATCAAGATCACTAGTTTTCTTTAATTTCACTTTTTTCAGAGTCTATAGCTCTCAAACATCCTGTTACTCAACGCTTTCAATCTTTGCTTTGTGAAATTTTATTTCCTCATTAACATTAAACTATGCCATGCGATCTTTTTACCACAACATGTTCTCTATTCGGTGCTTGACTATAAAGTGCTATGAAAAGTGATTACTGACCAGACACAACTCTAGCCCTTAGTCTTGATTTCAAAACTCTCCATCTTACTTATTAATGAAAAATAATTGACCCAAGCAAATACAGTACTGCTGTCTCTGACTCGTTAGTTATTTCTTAACAATGCCCTGTTCTGCAAAACCTATGAGTAAGCGGTTGTTGGGTATTATACACTACAATAGTAAATGAAAAAAAAAATCCTTTTGATTGTGTTAACCTGTTTATATATAGGCATAGAGCAGGGTAAATCAAATCTGTCATGAATTTGATTCTATAATGTAAATGACCCATCTATCTGTAAACTAAGAGTTCAGAGTGTTGTAATGAATGTCCTAATACGATGGTGATTTTTGTTGCAAGCCACTTTTCGCATGAAGGTTTGGCAATCAAACAAGGAGAATTTGCTTTTTTCTTTGTGCTTAATGAATGCGCCATGGCTGGGTACAATAAATGTATGTAACCTCAGTTTTGGCTCAATTCTACTTTTGTGCCCTGTGTTTTCACGTGGCCTGACGTGTGACGTCTATATATTTTTCCCCACTATAGCGCCGTTAAGACTTAAGAGCTTAGTTATAGAACGAGTCACATGCCTCTTTGTTGTTCATTGGATAACTGACAACTAAAATTCTAACATGACCCTAAGTTTCTGAAAAGAAATACATCAAAGCTACGGAAATCAAATTTCGACTTTTATTTCACTGTGTCTCTGTCCTAAAATCACAACATAGGAAAAAACCTTCACAAATTTATCGTTCACAATAAAATAAAATAGAAGATATAAATTTTTCTATGTTCCGAAGCAAAATTAACAAGCGAAACAAGAATCTTCAGGAAAGAGGATTACTTAAACAGATCTCTTAACTGAATTAACTGTGGGGCACTCAAGTTAAAAAATGTAAACGCCAGGGCACCAAATGGAAAATAGTGAAAATACACGCACGCAGTGGAAGAGTGCAAAACCTCAGGGTATCAAAGTGGAAAGTTTAAGATTCTCCCCTAAGGTTTAGGATTTCTTGGAAACTAATAGGCCATATTCTGTTGGCCACCTCATATAAATTTTGTTAGGTTTGGTAACCATTAAGAAATTATCTAATACGAAGTATTACAGATAATATAGACAATCTACTAGATAACTTTGTACTGTGCTTTATTCTATTTCTTGTTTTGTCTACTTATGGGTTATGGGCAGATATGGTTATACTTGGTCCTTCAATTAGAATTGTTTGTTTTTATCCAAATTTGCATTACTGTTCATGTCAATGTGTTGATTCCTATTTGTTTGGATTTTTGGTTGCTGAATGCATCCTAAGTGTCTTGTGTTTTTGGACTATTAGGTCGCGGAGAACTTGGAAGCCGAACGTGCAAGAGAAACGACTCTTCAGTTACATTTTGGACCGCCATATTCGTGTCCATGTGACAACACATGCTCTACGTTGCATTGACAAAGCTGGTGGTATTGATGAGTACCTGTTGAAGACACCGTATCATAAAATGGACACAGAAATGGGCCTCCTTTGGAAAGCCAAAATTGAGAAGATGTATGAAGAGCTTGGAAACAAGGAGATTTCGTTTTTCTCTCCGGAGGATGAAGCCAAGTTTGAGCAAAGTTTTAAGGAAATGAAGCTAGATGAAAAAATAGCCCGAAGAGAATTCAGAAGAGGATTGTATGGGTCAGTGAAGCCCGAAAAAATATCAGATCTCGAGGGTGGTGGTGGTGAATCAGATGGTGGAGTTGGAAGCTCACATTCAGACCATGAGCAGTTGGCTGCAACTGCTTGAGCTTTCACTTCATGACCAGCTTTCACTTCATGACCAGCTTTCACTTCATGGTGGAGTCGGAAGCTCACATTCAGTGCTTGAGATTGCACCTCATGACCACCTTTAAGCTTTTGCAATTTTCTTCAGGATGTAAACCAGTTTTGCAGTATTACTCTCGCAGCTGTAGCATTTGACAATTTTATTTCTCATGTTTACAGTTTCTTATCATCTAGGCTATTGACATAAGAGCCCTCTTGTATGATACTAGTATAATGCTCAGAATTTTGATAAGGAAAAATTGATAATATAAATCCCACCTTTTGCCGGTCTTCTCAAA

mRNA sequence

TAGCTTTTTTTCCAACTCCCTTCATTTCCTTCCACTTCCCATATAATTATTTGTACCATAAACAGAACATTATTTTACCTTTCCTTTCTTTTCTTTTTCTTCCAATTCCTCCCAACCAAATAAAGTCTGTTAAACCCCAAATAAATTTCCGCTCTCCTCAAACTCCAATTCGCAGCTGCTCTTCATCTCCTTCCTCCTCTTCCTCCACCATTTTATATTTGCATCACCACCTCTAAACGGCGGCGCTTCCGCCATTGTGGACTTCCAATTTGGAGACTTCCGAACACCACACCTCCTCTGCCGCTACTATTCTCCTGTCGAAGATATTGTTGATATTTTTCTTAACAACATCAGACTGATTTGTGATATTCAACACACTAGTGAGAGGAAATGGCATTCAGGTCAAAGGAAACAATGAAGAAGATACTGAAGAAAGTCGGAGAAGATAACATTACGAGGGGTGTCAAAGAGGCTTTAACAAAGAACATACCAAATAACAAGGTAGTCATGGGTCGTGCTAAGCGAGGGCTTTTTGCCGGTCGCCATATTCAGTTCGGCAACCAAGTTAGCGAAGACGGAGGCAATAAGTCGCGGAGAACTTGGAAGCCGAACGTGCAAGAGAAACGACTCTTCAGTTACATTTTGGACCGCCATATTCGTGTCCATGTGACAACACATGCTCTACGTTGCATTGACAAAGCTGGTGGTATTGATGAGTACCTGTTGAAGACACCGTATCATAAAATGGACACAGAAATGGGCCTCCTTTGGAAAGCCAAAATTGAGAAGATGTATGAAGAGCTTGGAAACAAGGAGATTTCGTTTTTCTCTCCGGAGGATGAAGCCAAGTTTGAGCAAAGTTTTAAGGAAATGAAGCTAGATGAAAAAATAGCCCGAAGAGAATTCAGAAGAGGATTGTATGGGTCAGTGAAGCCCGAAAAAATATCAGATCTCGAGGGTGGTGGTGGTGAATCAGATGGTGGAGTTGGAAGCTCACATTCAGACCATGAGCAGTTGGCTGCAACTGCTTGAGCTTTCACTTCATGACCAGCTTTCACTTCATGACCAGCTTTCACTTCATGGTGGAGTCGGAAGCTCACATTCAGTGCTTGAGATTGCACCTCATGACCACCTTTAAGCTTTTGCAATTTTCTTCAGGATGTAAACCAGTTTTGCAGTATTACTCTCGCAGCTGTAGCATTTGACAATTTTATTTCTCATGTTTACAGTTTCTTATCATCTAGGCTATTGACATAAGAGCCCTCTTGTATGATACTAGTATAATGCTCAGAATTTTGATAAGGAAAAATTGATAATATAAATCCCACCTTTTGCCGGTCTTCTCAAA

Coding sequence (CDS)

ATGGCATTCAGGTCAAAGGAAACAATGAAGAAGATACTGAAGAAAGTCGGAGAAGATAACATTACGAGGGGTGTCAAAGAGGCTTTAACAAAGAACATACCAAATAACAAGGTAGTCATGGGTCGTGCTAAGCGAGGGCTTTTTGCCGGTCGCCATATTCAGTTCGGCAACCAAGTTAGCGAAGACGGAGGCAATAAGTCGCGGAGAACTTGGAAGCCGAACGTGCAAGAGAAACGACTCTTCAGTTACATTTTGGACCGCCATATTCGTGTCCATGTGACAACACATGCTCTACGTTGCATTGACAAAGCTGGTGGTATTGATGAGTACCTGTTGAAGACACCGTATCATAAAATGGACACAGAAATGGGCCTCCTTTGGAAAGCCAAAATTGAGAAGATGTATGAAGAGCTTGGAAACAAGGAGATTTCGTTTTTCTCTCCGGAGGATGAAGCCAAGTTTGAGCAAAGTTTTAAGGAAATGAAGCTAGATGAAAAAATAGCCCGAAGAGAATTCAGAAGAGGATTGTATGGGTCAGTGAAGCCCGAAAAAATATCAGATCTCGAGGGTGGTGGTGGTGAATCAGATGGTGGAGTTGGAAGCTCACATTCAGACCATGAGCAGTTGGCTGCAACTGCTTGA

Protein sequence

MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSVKPEKISDLEGGGGESDGGVGSSHSDHEQLAATA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24704.1Spo24704.1mRNA


Homology
[Close]
BLAST of Spo24704.1 vs. NCBI nr
Match: gi|902232214|gb|KNA22534.1| (hypothetical protein SOVF_033110 [Spinacia oleracea])

HSP 1 Score: 423.3 bits (1087), Expect = 2.500e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180
           TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV
Sbjct: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180

Query: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
           KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA
Sbjct: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 213
[Close]
BLAST of Spo24704.1 vs. NCBI nr
Match: gi|902181438|gb|KNA09752.1| (hypothetical protein SOVF_150830 [Spinacia oleracea])

HSP 1 Score: 400.6 bits (1028), Expect = 1.700e-108
Identity = 206/213 (96.71%), Postives = 207/213 (97.18%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNN+VVMGRAKRGLFAGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNEVVMGRAKRGLFAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180
           TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEK ARREFRRGLYG V
Sbjct: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKTARREFRRGLYGPV 180

Query: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
           KPEKISDLE GGGESD   GSSHSDHEQLAATA
Sbjct: 181 KPEKISDLE-GGGESD---GSSHSDHEQLAATA 209
[Close]
BLAST of Spo24704.1 vs. NCBI nr
Match: gi|731365652|ref|XP_010694642.1| (PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 360.1 bits (923), Expect = 2.600e-96
Identity = 187/214 (87.38%), Postives = 194/214 (90.65%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKE LTK IPNNKVVMGRAKRGLFAGRHIQ+GNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEGLTKYIPNNKVVMGRAKRGLFAGRHIQYGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+RRTWKPNVQEKRLFSY+LDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYG-S 180
           TEMGLLWKAKIEKMYE+LG  E+SFFSPEDEAKFEQSFKEMKLDEK ARREFRR LYG S
Sbjct: 121 TEMGLLWKAKIEKMYEDLGKMEVSFFSPEDEAKFEQSFKEMKLDEKTARREFRRRLYGLS 180

Query: 181 VKPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
            K E   D +  GGESD   GSSHSDHEQ+ A A
Sbjct: 181 AKSEGTIDPQ--GGESDD--GSSHSDHEQMIANA 210
[Close]
BLAST of Spo24704.1 vs. NCBI nr
Match: gi|731315030|ref|XP_010689627.1| (PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 355.1 bits (910), Expect = 8.300e-95
Identity = 184/214 (85.98%), Postives = 193/214 (90.19%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEAL KN+PNNKVVMGRAKRGL+AGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALKKNLPNNKVVMGRAKRGLYAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+R+TWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYL+KTPYHKMD
Sbjct: 61  EDGGNKTRKTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLMKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYG-S 180
           TEMGLLWKAKIEKMY ELG  E+SFFSPEDEAKFEQSFKEMKLDEK ARREFRR LYG S
Sbjct: 121 TEMGLLWKAKIEKMYAELGQMEVSFFSPEDEAKFEQSFKEMKLDEKSARREFRRRLYGFS 180

Query: 181 VKPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
            K +  SD +    ESD   GSSHSDHEQ+ A A
Sbjct: 181 AKSDATSDPQ--VSESD---GSSHSDHEQMVANA 209
[Close]
BLAST of Spo24704.1 vs. NCBI nr
Match: gi|870845481|gb|KMS98202.1| (hypothetical protein BVRB_4g094660 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 345.5 bits (885), Expect = 6.600e-92
Identity = 179/206 (86.89%), Postives = 186/206 (90.29%), Query Frame = 1 

		  

Query: 9   MKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVSEDGGNKSR 68
           MKKILKKVGEDNITRGVKE LTK IPNNKVVMGRAKRGLFAGRHIQ+GNQVSEDGGNK+R
Sbjct: 1   MKKILKKVGEDNITRGVKEGLTKYIPNNKVVMGRAKRGLFAGRHIQYGNQVSEDGGNKTR 60

Query: 69  RTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK 128
           RTWKPNVQEKRLFSY+LDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK
Sbjct: 61  RTWKPNVQEKRLFSYVLDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK 120

Query: 129 AKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYG-SVKPEKISD 188
           AKIEKMYE+LG  E+SFFSPEDEAKFEQSFKEMKLDEK ARREFRR LYG S K E   D
Sbjct: 121 AKIEKMYEDLGKMEVSFFSPEDEAKFEQSFKEMKLDEKTARREFRRRLYGLSAKSEGTID 180

Query: 189 LEGGGGESDGGVGSSHSDHEQLAATA 214
            +  GGESD   GSSHSDHEQ+ A A
Sbjct: 181 PQ--GGESDD--GSSHSDHEQMIANA 202
[Close]
BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUD1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_033110 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.700e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180
           TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV
Sbjct: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180

Query: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
           KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA
Sbjct: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 213
[Close]
BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150830 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.200e-108
Identity = 206/213 (96.71%), Postives = 207/213 (97.18%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNN+VVMGRAKRGLFAGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNEVVMGRAKRGLFAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180
           TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEK ARREFRRGLYG V
Sbjct: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKTARREFRRGLYGPV 180

Query: 181 KPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
           KPEKISDLE GGGESD   GSSHSDHEQLAATA
Sbjct: 181 KPEKISDLE-GGGESD---GSSHSDHEQLAATA 209
[Close]
BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1Z9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g023700 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.800e-95
Identity = 184/214 (85.98%), Postives = 193/214 (90.19%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFRSKETMKKILKKVGEDNITRGVKEAL KN+PNNKVVMGRAKRGL+AGRHIQFGNQVS
Sbjct: 1   MAFRSKETMKKILKKVGEDNITRGVKEALKKNLPNNKVVMGRAKRGLYAGRHIQFGNQVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+R+TWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYL+KTPYHKMD
Sbjct: 61  EDGGNKTRKTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLMKTPYHKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYG-S 180
           TEMGLLWKAKIEKMY ELG  E+SFFSPEDEAKFEQSFKEMKLDEK ARREFRR LYG S
Sbjct: 121 TEMGLLWKAKIEKMYAELGQMEVSFFSPEDEAKFEQSFKEMKLDEKSARREFRRRLYGFS 180

Query: 181 VKPEKISDLEGGGGESDGGVGSSHSDHEQLAATA 214
            K +  SD +    ESD   GSSHSDHEQ+ A A
Sbjct: 181 AKSDATSDPQ--VSESD---GSSHSDHEQMVANA 209
[Close]
BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BE10_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g094660 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.600e-92
Identity = 179/206 (86.89%), Postives = 186/206 (90.29%), Query Frame = 1 

		  

Query: 9   MKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVSEDGGNKSR 68
           MKKILKKVGEDNITRGVKE LTK IPNNKVVMGRAKRGLFAGRHIQ+GNQVSEDGGNK+R
Sbjct: 1   MKKILKKVGEDNITRGVKEGLTKYIPNNKVVMGRAKRGLFAGRHIQYGNQVSEDGGNKTR 60

Query: 69  RTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK 128
           RTWKPNVQEKRLFSY+LDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK
Sbjct: 61  RTWKPNVQEKRLFSYVLDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLLWK 120

Query: 129 AKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYG-SVKPEKISD 188
           AKIEKMYE+LG  E+SFFSPEDEAKFEQSFKEMKLDEK ARREFRR LYG S K E   D
Sbjct: 121 AKIEKMYEDLGKMEVSFFSPEDEAKFEQSFKEMKLDEKTARREFRRRLYGLSAKSEGTID 180

Query: 189 LEGGGGESDGGVGSSHSDHEQLAATA 214
            +  GGESD   GSSHSDHEQ+ A A
Sbjct: 181 PQ--GGESDD--GSSHSDHEQMIANA 202
[Close]
BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Match: A0A067L255_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04807 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.000e-80
Identity = 148/184 (80.43%), Postives = 167/184 (90.76%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFR KE MKK+LKKVGE+N+T GVKE+L K+IP++KVVMGRAKRGLFAGRHIQFGN+VS
Sbjct: 1   MAFRGKEIMKKVLKKVGENNLTSGVKESLKKSIPDSKVVMGRAKRGLFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRTWKPNVQEKRLFSYILDRHI+V VTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLYGSV 180
           TEMGLLWKAKIEK+YE LG  E++FFSPEDEAKFEQ FK++KL E+ ARREFR+ +Y  +
Sbjct: 121 TEMGLLWKAKIEKLYENLGKMEVAFFSPEDEAKFEQRFKDLKLSEREARREFRQKMYAEL 180

Query: 181 KPEK 185
             +K
Sbjct: 181 AKQK 184
[Close]
BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Match: RM24_YEAST (54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL24 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.200e-10
Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 1 

		  

Query: 39  VMGRAKRGLFAGRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHAL 98
           +  ++ +GL+ G  +QFGN +SE    K+R+ W PNV +K L+S  L+R I + +T   L
Sbjct: 65  IFKQSNKGLYGGSFVQFGNNISESKA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVL 124

Query: 99  RCIDKAGGIDEYLLKTPYHKMDTEMGLLWKA--KIEKMYEELGN 141
           + I K GGID YL K    ++       WK   ++ K  +E+ N
Sbjct: 125 KTISKEGGIDNYLTKEKSARIKELGPTGWKLRYRVLKRKDEIEN 167
[Close]
BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Match: RL28_MAGMM (50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rpmB PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.800e-10
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 1 

		  

Query: 43  AKRGLFAGRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCID 102
           A++    G+  Q GN+VS     K+RR W PN+Q K L+S  L + ++V ++T ALR +D
Sbjct: 2   ARKRTLGGKAPQAGNKVSHSQ-RKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 61

Query: 103 KAGGIDEYLLK 114
            AGG+D YLLK
Sbjct: 62  NAGGLDNYLLK 71
[Close]
BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Match: RL28_GLUDA (50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpmB PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.400e-9
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 1 

		  

Query: 43  AKRGLFAGRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCID 102
           ++R    G+ +  GN VS    NKSRR + PN+QE  L S IL   +R+ ++T+ +R ++
Sbjct: 2   SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVE 61

Query: 103 KAGGIDEYLLKTPYHKMDTE 123
             GG+D +LL TP  K+ TE
Sbjct: 62  HNGGLDAFLLSTPNRKLPTE 80
[Close]
BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Match: RM24_SCHPO (54S ribosomal protein L24, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl24 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.200e-8
Identity = 39/138 (28.26%), Postives = 71/138 (51.45%), Query Frame = 1 

		  

Query: 44  KRGLFAGRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDK 103
           ++ L+ G   + GN      G+K+RR W PN   K L+S +L+    ++VT+  LR IDK
Sbjct: 28  QQNLYGGSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRTIDK 87

Query: 104 AGGIDEYLLKTPYHKMDTEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKL 163
            GG+DEYL+K+   ++ + +GL        +  +LG K         ++  ++ + E K+
Sbjct: 88  EGGLDEYLVKSTPSRLKS-LGLRGVELRALVLHKLGAKNPILEKLPSDSGAQKRYLE-KV 147

Query: 164 DEKIARREFRRGLYGSVK 182
            + + +    + LY  +K
Sbjct: 148 KDVVLKLNRSKKLYQQIK 163
[Close]
BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Match: RL28_RHOCS (50S ribosomal protein L28 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpmB PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.500e-8
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1 

		  

Query: 50  GRHIQFGNQVSEDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDE 109
           G+ +Q GN VS    NKSRR W PN+QE  L S  L R +R+ ++T+ +R I+  GG+D 
Sbjct: 9   GKGVQTGNNVSH-ANNKSRRRWLPNLQETSLLSDTLGRMVRLRLSTNGIRTIEHKGGLDA 68

Query: 110 YLLKTPYHKMDTEMGLLWKAKIEKMYE 137
            LL  P  +++ +   + K +I+K  E
Sbjct: 69  ALLDIPDARLNQDARRV-KKQIQKAIE 93
[Close]
BLAST of Spo24704.1 vs. TAIR (Arabidopsis)
Match: AT4G31460.1 (Ribosomal L28 family)

HSP 1 Score: 268.5 bits (685), Expect = 3.600e-72
Identity = 138/206 (66.99%), Postives = 160/206 (77.67%), Query Frame = 1 

		  

Query: 1   MAFRSKETMKKILKKVGEDNITRGVKEALTKNIPNNKVVMGRAKRGLFAGRHIQFGNQVS 60
           MAFR KE MKK++KKVG +NIT  +KE L   +P+ KVVMGRAKRGL+AGRHIQ+GN+VS
Sbjct: 1   MAFRGKEMMKKLVKKVGAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVS 60

Query: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVHVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYI D HI+V VTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TEMGLLWKAKIEKMYEELGNKEISFFSPEDEAKFEQSFKEMKLDEKIARREFRRGLY--- 180
           TEMGL WK K+E  Y ELG  E++FF+PEDEAK EQ FK++ + +K ARRE RR      
Sbjct: 121 TEMGLYWKTKVEARYAELGQMEVAFFNPEDEAKLEQGFKDLNIAKKDARREARRTFRKKG 180

Query: 181 GSVKPEKISDLEGGGG-----ESDGG 199
           G  K ++ + +EGGGG     E D G
Sbjct: 181 GGNKGDEEASIEGGGGSESHQEDDNG 206
The following BLAST results are available for this feature:
BLAST of Spo24704.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902232214|gb|KNA22534.1|2.5e-115100.hypothetical protein SOVF_0331... [more]
gi|902181438|gb|KNA09752.1|1.7e-10896.7hypothetical protein SOVF_1508... [more]
gi|731365652|ref|XP_010694642.1|2.6e-9687.3PREDICTED: 39S ribosomal prote... [more]
gi|731315030|ref|XP_010689627.1|8.3e-9585.9PREDICTED: 39S ribosomal prote... [more]
gi|870845481|gb|KMS98202.1|6.6e-9286.8hypothetical protein BVRB_4g09... [more]
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BLAST of Spo24704.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RUD1_SPIOL1.7e-115100.Uncharacterized protein OS=Spi... [more]
A0A0K9QR51_SPIOL1.2e-10896.7Uncharacterized protein OS=Spi... [more]
A0A0J8D1Z9_BETVU5.8e-9585.9Uncharacterized protein OS=Bet... [more]
A0A0J8BE10_BETVU4.6e-9286.8Uncharacterized protein OS=Bet... [more]
A0A067L255_JATCU4.0e-8080.4Uncharacterized protein OS=Jat... [more]
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BLAST of Spo24704.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RM24_YEAST2.2e-1035.554S ribosomal protein L24, mit... [more]
RL28_MAGMM4.8e-1045.050S ribosomal protein L28 OS=M... [more]
RL28_GLUDA2.4e-940.050S ribosomal protein L28 OS=G... [more]
RM24_SCHPO1.2e-828.254S ribosomal protein L24, mit... [more]
RL28_RHOCS1.5e-839.050S ribosomal protein L28 OS=R... [more]
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BLAST of Spo24704.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G31460.13.6e-7266.9Ribosomal L28 family[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001383Ribosomal protein L28HAMAPMF_00373Ribosomal_L28coord: 42..110
score: 1
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 32..174
score: 1.5
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 45..103
score: 8.1
NoneNo IPR availableGENE3D2.30.170.40coord: 43..118
score: 4.9
NoneNo IPR availableunknownSSF143800L28p-likecoord: 43..119
score: 5.49

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006522 alanine metabolic process
biological_process GO:0019877 diaminopimelate biosynthetic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0001510 RNA methylation
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006396 RNA processing
biological_process GO:0006364 rRNA processing
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0042545 cell wall modification
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0009909 regulation of flower development
biological_process GO:0034968 histone lysine methylation
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005618 cell wall
cellular_component GO:0005622 intracellular
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0005643 nuclear pore
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005840 ribosome
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003862 3-isopropylmalate dehydrogenase activity
molecular_function GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RNA-Seq Expression