Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAAGTTGTCGCCTCGTAGTAGGGGCTCGAGATCGAACAAGGGTATCAAGGTAAAGCATGCCTTGCAATTGATTCTGTTGTTGGGTGTTGGTATCTGGTTAGTATACCAAATCCAACGTTCTTACAGTAAGGATGAAACGTTTGAAGGAGCTAAAGTCTCGGAAAAGTTACAGGATGGGATTGAGAAGGTAAAGTTGGGAAGGAAGGATCTTCCCGAGTTGGAGGAGGAGACGTCAAACTTAGATGAGAAGAATAACGTGGAAGAGAAAAGTGAGGATGTAAACCCGGGTGAGGACGAGGATGGAGGAGGTAAAGTGGATGAGAAACCCGACGAGGAAGTTAAGGATGAGAGCGTGGAGAAGGAAAAAGAGGGAGAGGGTACGCAAAGTGAGACAAAGGAGAATGAAGAGGCGAAGGAGGAAGAGAAGGGGAGTGTAGAGACGGAGCAAGAAGAGAATAAGGACAAGGAAAATGAAAATGAGATGAAAGATGGTGGAGAAAACAAGAGTGAGGAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAACGAAAATGAGACGAAGGAGAATAAAGACGAGGAGAAGGAGAAAGAGAAAGAGGAGAGCAAAGAAAATGAAAGTGGAGTGCAAAACACCGATGAGAACAAGACCAACGAGAGTAAGGAAGAGAATAAAGAGAAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAATGAAAATGAGACGAAGGAGAAGGAGAAAGAGGAGAGTAAAGAAAATGAAAGTGGAATGCAAACCACGGATGAGAACAAGACATATGAGAACAAGGAAGAGAATAAAGAGAGTGGAAATGAACAAGGGAAAGAAAATCCCGAGTCTCAGGCGGAGGAGAAGAAAGAGAACGAGAAGGAAGCTGAGAAAGAGCATGGAGAAACCGAGGCGGGAGACAAGGACTCTAAGATTAAGAGTTTAGGTTCATCAGATGGTCAGGTTCAAGATGGAATCAACAACGACGATAGAGCTTCCATTGAGGAACAAAAGAAGGAAAATCGTATGATAACTTTAGAGACAAATTCATCTGAACATAAAGAGAGTAATGAAGACATGGGTGATGATGGGTCCCACTCTCTCCCAGCTGAAACCGCAGAGCCTAGTGAAGACAAGCAAGCGAATTCCACTACATTCAGTGATGAGACATTTGTGTCACTGAATCGAAATGGTGCGACTGATAACACAAGCACTAAAGAGGATAATAATAATAATAGTTCCGTTATTCGGGAAGTTGTATCAGAGAAGCCCGATAAAACTGAAATGGGATCAAGTGTTGAAAACCAATCGGATGCAAGTTCTGATTCTGGGTCTAAAACGGAGGACACAAACAATGTTGAAGGTGGTGGTAATACAGGCTATTCTGATACATCTGGTCATGAAGGTGCTAATGGGGAGAATCCAGAGAAAAACATATCTGGATCGAATGGAACAACTGAATTAATCAACAATGATCAAGATCGTACTTCCCATGATTCAAACTCCGAGGAACATAAAGAGGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAGGAAGCATCAGAAGTAAGTGACAGCCAAAATACAGAAAAAACAGAAGAGAAGAAAGAGGAAGCATCAGAAGTAAATGACAGCCAAAATACAGAAGAGAAGAAAGAGGAAGCTTCAAAAGTAAATGACACCCAAGTTGCAGAAAAACCAGAGGAACATAAAGATGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGAAACAGAAGTAAATGGCACCCAAGATGCAGAAAAACCAGAGGAAAAGAAAGAGGAAGCATCAGAAGTAACTGACAGCCAAATTGCAGAAAAACCAGAGGAGAAAAAAGAGGAAGCATCAGAAGTAAATGATAACCAAGATGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGCAACAGAAGTAAATGAAGGCCAAAATACAGAAAAACCAGAAGAGAAGAAAGAGGAAGCAACTAAAGAAGAATCAACAAATGTTGAGCCCCATCATGAAGCTGATAATTCAGTCACACAAGATATTAAAGATCGAACTGATTTAGAAACTCTACCAGACAGTGGTAATGAAGCGAGCAGCAATAGTGATGCGATTGCCAAGTGA ATGTTTAAGTTGTCGCCTCGTAGTAGGGGCTCGAGATCGAACAAGGGTATCAAGGTAAAGCATGCCTTGCAATTGATTCTGTTGTTGGGTGTTGGTATCTGGTTAGTATACCAAATCCAACGTTCTTACAGTAAGGATGAAACGTTTGAAGGAGCTAAAGTCTCGGAAAAGTTACAGGATGGGATTGAGAAGGTAAAGTTGGGAAGGAAGGATCTTCCCGAGTTGGAGGAGGAGACGTCAAACTTAGATGAGAAGAATAACGTGGAAGAGAAAAGTGAGGATGTAAACCCGGGTGAGGACGAGGATGGAGGAGGTAAAGTGGATGAGAAACCCGACGAGGAAGTTAAGGATGAGAGCGTGGAGAAGGAAAAAGAGGGAGAGGGTACGCAAAGTGAGACAAAGGAGAATGAAGAGGCGAAGGAGGAAGAGAAGGGGAGTGTAGAGACGGAGCAAGAAGAGAATAAGGACAAGGAAAATGAAAATGAGATGAAAGATGGTGGAGAAAACAAGAGTGAGGAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAACGAAAATGAGACGAAGGAGAATAAAGACGAGGAGAAGGAGAAAGAGAAAGAGGAGAGCAAAGAAAATGAAAGTGGAGTGCAAAACACCGATGAGAACAAGACCAACGAGAGTAAGGAAGAGAATAAAGAGAAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAATGAAAATGAGACGAAGGAGAAGGAGAAAGAGGAGAGTAAAGAAAATGAAAGTGGAATGCAAACCACGGATGAGAACAAGACATATGAGAACAAGGAAGAGAATAAAGAGAGTGGAAATGAACAAGGGAAAGAAAATCCCGAGTCTCAGGCGGAGGAGAAGAAAGAGAACGAGAAGGAAGCTGAGAAAGAGCATGGAGAAACCGAGGCGGGAGACAAGGACTCTAAGATTAAGAGTTTAGGTTCATCAGATGGTCAGGTTCAAGATGGAATCAACAACGACGATAGAGCTTCCATTGAGGAACAAAAGAAGGAAAATCGTATGATAACTTTAGAGACAAATTCATCTGAACATAAAGAGAGTAATGAAGACATGGGTGATGATGGGTCCCACTCTCTCCCAGCTGAAACCGCAGAGCCTAGTGAAGACAAGCAAGCGAATTCCACTACATTCAGTGATGAGACATTTGTGTCACTGAATCGAAATGGTGCGACTGATAACACAAGCACTAAAGAGGATAATAATAATAATAGTTCCGTTATTCGGGAAGTTGTATCAGAGAAGCCCGATAAAACTGAAATGGGATCAAGTGTTGAAAACCAATCGGATGCAAGTTCTGATTCTGGGTCTAAAACGGAGGACACAAACAATGTTGAAGGTGGTGGTAATACAGGCTATTCTGATACATCTGGTCATGAAGGTGCTAATGGGGAGAATCCAGAGAAAAACATATCTGGATCGAATGGAACAACTGAATTAATCAACAATGATCAAGATCGTACTTCCCATGATTCAAACTCCGAGGAACATAAAGAGGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAGGAAGCATCAGAAGTAAGTGACAGCCAAAATACAGAAAAAACAGAAGAGAAGAAAGAGGAAGCATCAGAAGTAAATGACAGCCAAAATACAGAAGAGAAGAAAGAGGAAGCTTCAAAAGTAAATGACACCCAAGTTGCAGAAAAACCAGAGGAACATAAAGATGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGAAACAGAAGTAAATGGCACCCAAGATGCAGAAAAACCAGAGGAAAAGAAAGAGGAAGCATCAGAAGTAACTGACAGCCAAATTGCAGAAAAACCAGAGGAGAAAAAAGAGGAAGCATCAGAAGTAAATGATAACCAAGATGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGCAACAGAAGTAAATGAAGGCCAAAATACAGAAAAACCAGAAGAGAAGAAAGAGGAAGCAACTAAAGAAGAATCAACAAATGTTGAGCCCCATCATGAAGCTGATAATTCAGTCACACAAGATATTAAAGATCGAACTGATTTAGAAACTCTACCAGACAGTGGTAATGAAGCGAGCAGCAATAGTGATGCGATTGCCAAGTGA ATGTTTAAGTTGTCGCCTCGTAGTAGGGGCTCGAGATCGAACAAGGGTATCAAGGTAAAGCATGCCTTGCAATTGATTCTGTTGTTGGGTGTTGGTATCTGGTTAGTATACCAAATCCAACGTTCTTACAGTAAGGATGAAACGTTTGAAGGAGCTAAAGTCTCGGAAAAGTTACAGGATGGGATTGAGAAGGTAAAGTTGGGAAGGAAGGATCTTCCCGAGTTGGAGGAGGAGACGTCAAACTTAGATGAGAAGAATAACGTGGAAGAGAAAAGTGAGGATGTAAACCCGGGTGAGGACGAGGATGGAGGAGGTAAAGTGGATGAGAAACCCGACGAGGAAGTTAAGGATGAGAGCGTGGAGAAGGAAAAAGAGGGAGAGGGTACGCAAAGTGAGACAAAGGAGAATGAAGAGGCGAAGGAGGAAGAGAAGGGGAGTGTAGAGACGGAGCAAGAAGAGAATAAGGACAAGGAAAATGAAAATGAGATGAAAGATGGTGGAGAAAACAAGAGTGAGGAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAACGAAAATGAGACGAAGGAGAATAAAGACGAGGAGAAGGAGAAAGAGAAAGAGGAGAGCAAAGAAAATGAAAGTGGAGTGCAAAACACCGATGAGAACAAGACCAACGAGAGTAAGGAAGAGAATAAAGAGAAGGAAAATGAATTGAAGGAAGAGAACAAGGAGAATGAAAATGAGACGAAGGAGAAGGAGAAAGAGGAGAGTAAAGAAAATGAAAGTGGAATGCAAACCACGGATGAGAACAAGACATATGAGAACAAGGAAGAGAATAAAGAGAGTGGAAATGAACAAGGGAAAGAAAATCCCGAGTCTCAGGCGGAGGAGAAGAAAGAGAACGAGAAGGAAGCTGAGAAAGAGCATGGAGAAACCGAGGCGGGAGACAAGGACTCTAAGATTAAGAGTTTAGGTTCATCAGATGGTCAGGTTCAAGATGGAATCAACAACGACGATAGAGCTTCCATTGAGGAACAAAAGAAGGAAAATCGTATGATAACTTTAGAGACAAATTCATCTGAACATAAAGAGAGTAATGAAGACATGGGTGATGATGGGTCCCACTCTCTCCCAGCTGAAACCGCAGAGCCTAGTGAAGACAAGCAAGCGAATTCCACTACATTCAGTGATGAGACATTTGTGTCACTGAATCGAAATGGTGCGACTGATAACACAAGCACTAAAGAGGATAATAATAATAATAGTTCCGTTATTCGGGAAGTTGTATCAGAGAAGCCCGATAAAACTGAAATGGGATCAAGTGTTGAAAACCAATCGGATGCAAGTTCTGATTCTGGGTCTAAAACGGAGGACACAAACAATGTTGAAGGTGGTGGTAATACAGGCTATTCTGATACATCTGGTCATGAAGGTGCTAATGGGGAGAATCCAGAGAAAAACATATCTGGATCGAATGGAACAACTGAATTAATCAACAATGATCAAGATCGTACTTCCCATGATTCAAACTCCGAGGAACATAAAGAGGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAGGAAGCATCAGAAGTAAGTGACAGCCAAAATACAGAAAAAACAGAAGAGAAGAAAGAGGAAGCATCAGAAGTAAATGACAGCCAAAATACAGAAGAGAAGAAAGAGGAAGCTTCAAAAGTAAATGACACCCAAGTTGCAGAAAAACCAGAGGAACATAAAGATGAAGCTTCAAAAGTAAGTGACACCCAAGTTGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGAAACAGAAGTAAATGGCACCCAAGATGCAGAAAAACCAGAGGAAAAGAAAGAGGAAGCATCAGAAGTAACTGACAGCCAAATTGCAGAAAAACCAGAGGAGAAAAAAGAGGAAGCATCAGAAGTAAATGATAACCAAGATGCAGAAAAACCAGAGGAGAAGAAAGAAGAAGCAACAGAAGTAAATGAAGGCCAAAATACAGAAAAACCAGAAGAGAAGAAAGAGGAAGCAACTAAAGAAGAATCAACAAATGTTGAGCCCCATCATGAAGCTGATAATTCAGTCACACAAGATATTAAAGATCGAACTGATTTAGAAACTCTACCAGACAGTGGTAATGAAGCGAGCAGCAATAGTGATGCGATTGCCAAGTGA MFKLSPRSRGSRSNKGIKVKHALQLILLLGVGIWLVYQIQRSYSKDETFEGAKVSEKLQDGIEKVKLGRKDLPELEEETSNLDEKNNVEEKSEDVNPGEDEDGGGKVDEKPDEEVKDESVEKEKEGEGTQSETKENEEAKEEEKGSVETEQEENKDKENENEMKDGGENKSEEENELKEENKENENETKENKDEEKEKEKEESKENESGVQNTDENKTNESKEENKEKENELKEENKENENETKEKEKEESKENESGMQTTDENKTYENKEENKESGNEQGKENPESQAEEKKENEKEAEKEHGETEAGDKDSKIKSLGSSDGQVQDGINNDDRASIEEQKKENRMITLETNSSEHKESNEDMGDDGSHSLPAETAEPSEDKQANSTTFSDETFVSLNRNGATDNTSTKEDNNNNSSVIREVVSEKPDKTEMGSSVENQSDASSDSGSKTEDTNNVEGGGNTGYSDTSGHEGANGENPEKNISGSNGTTELINNDQDRTSHDSNSEEHKEEASKVSDTQVAEKPEEKKEEASEVSDSQNTEKTEEKKEEASEVNDSQNTEEKKEEASKVNDTQVAEKPEEHKDEASKVSDTQVAEKPEEKKEEETEVNGTQDAEKPEEKKEEASEVTDSQIAEKPEEKKEEASEVNDNQDAEKPEEKKEEATEVNEGQNTEKPEEKKEEATKEESTNVEPHHEADNSVTQDIKDRTDLETLPDSGNEASSNSDAIAK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24853.1 vs. NCBI nr
Match: gi|902236456|gb|KNA24394.1| (hypothetical protein SOVF_015450 [Spinacia oleracea]) HSP 1 Score: 1171.8 bits (3030), Expect = 0.000e+0 Identity = 724/727 (99.59%), Postives = 727/727 (100.00%), Query Frame = 1
BLAST of Spo24853.1 vs. NCBI nr
Match: gi|870857460|gb|KMT09020.1| (hypothetical protein BVRB_6g137260 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 421.0 bits (1081), Expect = 4.200e-114 Identity = 393/789 (49.81%), Postives = 522/789 (66.16%), Query Frame = 1
BLAST of Spo24853.1 vs. NCBI nr
Match: gi|731339487|ref|XP_010680882.1| (PREDICTED: myb-like protein X [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 400.6 bits (1028), Expect = 5.900e-108 Identity = 384/785 (48.92%), Postives = 501/785 (63.82%), Query Frame = 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZN8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015450 PE=4 SV=1) HSP 1 Score: 1171.8 bits (3030), Expect = 0.000e+0 Identity = 724/727 (99.59%), Postives = 727/727 (100.00%), Query Frame = 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g137260 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 2.900e-114 Identity = 393/789 (49.81%), Postives = 522/789 (66.16%), Query Frame = 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Match: G5DXM9_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.500e-22 Identity = 63/89 (70.79%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Match: G5DXN0_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 4.500e-22 Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Match: G5DWL9_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9 Identity = 148/373 (39.68%), Postives = 209/373 (56.03%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24853.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 3 Position : 0 Zoom : x 1
BLAST of Spo24853.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo24853.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo24853.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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