Spo24868 (gene)

Overview
NameSpo24868
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCytochrome c oxidase subunit 6a
Locationchr3 : 53093565 .. 53097657 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTCCTGTAACCTGGTAATAGGATTAGGTACGCAAACTTCAATTCCAATTTCCCAATTTCATTCACAAAGGAAAAGAAAATTAGGAGAGAGAAAGTAGAGAGAAGCAACAATGGCGATGACACTTACTAAACTCAGATCTGGTGTTCAATCCGCCGTACGCGTTGGCCGTTCCTCCGAAATTATCAGGCGATCCTTCTCTTCTTCCTCCCATCACGATATTGAATGTAACTCTCTCTCTCATTCATTTTACAGATTTTGACCTTTAAATTTGAAATTCGCGATTTTAGCTTTGATTTAAATACCTTTTTACGATGTCTAACATCTGAATCGCGATATATTTATGTGCGATTATTCAATTAATTACGATTAGAGCTCTATTTTGTTTTGGGTGTAATTAGGGTTTTCATTTTGTTGAAGCATTTTAAGTTTTTGTTTTTTCGATAGAATTGTGGCATTTATCTTGTTTCTGGAAAAGAGTGTTGATTATTTTTGTTATTATTTCTTGGTTTAAGATGAGGCGAAAGAGGCATCAAAATGGGAGAAGATTTCATATCTTGGAATAGTTGGTTGCACAGCCTTTGCAATCTACAATCTTTCCAAGCCTCATCATCACTTTCCAGAGCCTCCTGTGAGTTCTGCTTTACTTTGTGCCTGCTTTACTCATCATCATTTTGGCCCCTTTTGTTGTCAATTATTTTAGATTGAGAATCGTATGCTTTTGCAATCATTGTTATGATCAGATGAAGGTACTGTAATACGATAATGGTCAATGTTTTTTCTCATCACTCCATCAGTCCTTTAGTTATTGGTAGTTTGGTGTTACGAGCCCTAGCAAAGGGGATGCTTTCGTTAGAAGAATAGTAATGTTCATTGATATGTCTTTGGTGTGTGCATCGACATGTCTGAAACTTAGGCAGAATGAGAACCTTGGTTAACATTCTCCAAAAGAAAAACCTCATGAGTCATGATCAAAGGTTTCCCTTAAGATATCTTCCAAGTGTTCTTCAGATAAGAGAATGGCAAAAGGATTTGCATGGTGTGGATCAACAACCACAATAGTTCCAATATGAGTACCAAAAGAATGGTGCATAGCAGGAGCAGGGGGTACATGTCATCCGTACATGAGGTGGACTGTGAATTGTAAGACTCTCCTTTAAAGCCCTAACAGATAGTTTTCTAGGCCTTGGATGGTTGGGCGACCTCTTAATAGGGTGCAACTTTAATCCATTGACGAAGGACAAGTGCTTTAGGGTCAACAGAAGGGCTCCAGGTTTGATAGTTCATATTAAGTCTTTCAATAAGCATATGCATACTGGACTTAATGACTTCAGGACATGCATCTAGGCTGTGAGAATCGAAACCACACGAGGGACAAACATCAAGCATACATTCATAATTTAGATGAATTTGTTTCCCTCTGTTTCTAAGATTTAGGTAAAGGGATCCAGGGGATTGGGATTAACCACAAAGATATTGACAAGGGCTTTAGCAAATCCAACTTTTCTCCTATATTTGGTATATTCATCCATTTTGATATAGGTTCCAAGTCTTCAAACAGTGGAGAGAAGACTTCCATCAGAACAGTAATAGACACTTGGACAGGGAGTGGAGCTTGACTCATTGGTCGATTCTTTATGTAGGTGTAGAATGTAGATTAAGAACTAAACATGGGGTTCTATTCTAACAAAACAAAATTTAGCCCTTGAACAAACCATGGTCTACCTTCCTAAACTAGAAGTTCTCTTCAAGGTTATAGAGGTGGATTAAAAACCATTCATTACCCATTCGAAGGATGGAAATATGTCCTTTTAAACACAGATTCCTCTGCATTTTTCCTTCTGTGACTTTTTAGGGATTAGGTCGCCACAAATTTTACCAAGTAGACAAGAAGAGATCATCTCATGAATCACTGCATCATCAGGAGCTGGAGTGATTATGATATTTCCTTCAGAAACAACTTGCCTTAACAGATGATTGCTATGGTTATTCATATGGACTTGAGGTGCACTATCTCTTGAAGCTGAGGGACGGGCATTAGGAGACTCATTTTCACCTCCAACAACTCGCTGCAGTGGGGGTGAGGGAAGGCCTGAACCTCCATTACCAAGGTTAGGGCCAGCTCTCTTGGGGTAAAGTTGGGACCCATGGATGGGATTAGGAGGCGGAAAGGCTGAGATAATAGCAGCATAGCTAGAGCTATAACATAAGTGGTAGATGACATTTGGAATGAAACGAGGAGAGAGTTCTTGCTATTTGGGTGGACATCGAAAACTTGTGTAGAGGCGTAACTGGCATGAGCCATCCTATGTATACTATTGAAATAAAATGGTGTGGAAAATAAACCATTCCAACAGGCACGAGAGTTAATTAAGTCTTCAGTGACAAAATAGATGACACCTAGCATATGAACATCAAACCCAGAGTAATAAGCAGAGCCTAGGTGACAAGTCTGACAACACATCAAGGTAAAATCATGATCGTCACCACTGGAGGACACTTAGCACGAAAGACCATAAGGGCTTAAAGCCTTGGTGGGTTACTAAATTGATCCAAAGGATCATAAAACAAGTGGGGTATAACTTATCTATTACTGAGAGCAAGAGAACACACATGACAAACCTCTTGATAATTAAGAGATATAAGAGAACCAAAACCATTATTCGATAAATTATGGTGTTTGTTTAGGTTTTCATTGTATTATTTGTAAATAAAATTCTGTATGCAGTATTCACTTTTTGTTTTTTGTGATTGTGTTTGCAGGCATACCCTTACATGCACATTCGCAACAAGGAGTTCCCATGGGGTATGGTTTCACCTTATCAAATCTTATTTTAATGATTCTGTTGTACTTTGTGCTTTACTGCTGTGTAAAATTGGCGTCCTCGTTTTTATTTTTTTTCTTTATAGCCTGTTTTGTTTCTTAAGATTCTTGTGAAGGAATGCCAAGGACAGGAGGGTTAGGAAGAGAAAGTAGTATAAATTAGCATTTCTGCCATTGATCAGTATGAATGGAAAGTAACAGAATTTACTCGCATGTTCATTGTATTAGTATCTGTTGCTGCTGATTAGTTGGGAAGTGAGGGAAACCGTTAATTTGGCTATAAATTAGAAAGGAATTTGATTATAATAACATATTTTGCTTGCTTGTAATTTTTTCCATTTTGATAGGAAAGTTGAATGACACTTTTGTAAATGCATTTTTCCAACCAATTTCTTTCACTCCATTTCTGACATGTTGATGTTCATGTCCTAGACCTGATCAAAATGAGCCCGGCCCGACCCGGCCTTAAATTTGGTTAATGGGCAGAATTATTAGACCTGAACCAGCCCGGCCCGGAATTTAAAATTTTAATGGGCTTTGGCAACGTAAAACTACACTTTTTATTTATAAATTTAGGCCGGTCCGAAAATGGCCCAAAACCCCCAACATTTTAGGTCCAAAATAGCGGGTTTGGGCACAAAAAACCAGCCCGGATCTTTGCCCGGCCCAACACACGGGCTGATTTTTTATGTATAGGCCCGGCTCGCTTTTGATCAGGTCTAATGACATGTCCCCATGGCAAAATTCTGGGTTTTTTTACCTCTCTTCAGCTTTGAGTCTGATTTTTGTTAGAATTTTCAAACGGATAGTTTTTTCGATCCTAGCTATTCCAGTTTCTGACACGGCTTTTGTGTGTTTCAGGACCTGATGGTCTTTTTGAGGTGAAGGAAGAACATCATTGATCACGCTGGTTTGCTGTTTTATCTAATGCTATTTGTGACCAGATCAAACTCTCATTTAAATTTTCTACATCGATGTTTTTCCGTTGTATGGTTGATTTAAATGAAGCCGTGAGGGTATTGATCTTTTTTGTGATTTTTGGGTTATCTTTAAACAGTATATTTCTTCAAATAAAATGTGGTTAATACTTATATGCACGTTTCTATCTTCAAATTACCAATATTTCTTGTTGTATAAGTATTGATGTTTGTGCATTAGTTCAATGTCCATTTAACTAAAGCTGGTGATACAAAATGGAGATGTAGTCTTGTTTAGGTCACCAAGATCCATTATACTCATGCTTCAACTAGATTCTGGTTGTGACTTGTGA

mRNA sequence

GGGTCCTGTAACCTGGTAATAGGATTAGGTACGCAAACTTCAATTCCAATTTCCCAATTTCATTCACAAAGGAAAAGAAAATTAGGAGAGAGAAAGTAGAGAGAAGCAACAATGGCGATGACACTTACTAAACTCAGATCTGGTGTTCAATCCGCCGTACGCGTTGGCCGTTCCTCCGAAATTATCAGGCGATCCTTCTCTTCTTCCTCCCATCACGATATTGAATATGAGGCGAAAGAGGCATCAAAATGGGAGAAGATTTCATATCTTGGAATAGTTGGTTGCACAGCCTTTGCAATCTACAATCTTTCCAAGCCTCATCATCACTTTCCAGAGCCTCCTGCATACCCTTACATGCACATTCGCAACAAGGAGTTCCCATGGGGTATGGACCTGATGGTCTTTTTGAGGTGAAGGAAGAACATCATTGATCACGCTGGTTTGCTGTTTTATCTAATGCTATTTGTGACCAGATCAAACTCTCATTTAAATTTTCTACATCGATGTTTTTCCGTTGTATGGTTGATTTAAATGAAGCCGTGAGGGTATTGATCTTTTTTGTGATTTTTGGGTTATCTTTAAACAGTATATTTCTTCAAATAAAATGTGGTTAATACTTATATGCACGTTTCTATCTTCAAATTACCAATATTTCTTGTTGTATAAGTATTGATGTTTGTGCATTAGTTCAATGTCCATTTAACTAAAGCTGGTGATACAAAATGGAGATGTAGTCTTGTTTAGGTCACCAAGATCCATTATACTCATGCTTCAACTAGATTCTGGTTGTGACTTGTGA

Coding sequence (CDS)

ATGGCGATGACACTTACTAAACTCAGATCTGGTGTTCAATCCGCCGTACGCGTTGGCCGTTCCTCCGAAATTATCAGGCGATCCTTCTCTTCTTCCTCCCATCACGATATTGAATATGAGGCGAAAGAGGCATCAAAATGGGAGAAGATTTCATATCTTGGAATAGTTGGTTGCACAGCCTTTGCAATCTACAATCTTTCCAAGCCTCATCATCACTTTCCAGAGCCTCCTGCATACCCTTACATGCACATTCGCAACAAGGAGTTCCCATGGGGTATGGACCTGATGGTCTTTTTGAGGTGA

Protein sequence

MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAFAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMDLMVFLR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24868.1Spo24868.1mRNA


Homology
[Close]
BLAST of Spo24868.1 vs. NCBI nr
Match: gi|902236457|gb|KNA24395.1| (hypothetical protein SOVF_015460 [Spinacia oleracea])

HSP 1 Score: 193.4 bits (490), Expect = 2.000e-46
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

		  

Query: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60
          MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA
Sbjct: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60

Query: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
          FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWG D
Sbjct: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGPD 94
[Close]
BLAST of Spo24868.1 vs. NCBI nr
Match: gi|731339302|ref|XP_010680777.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 161.8 bits (408), Expect = 6.300e-37
Identity = 76/94 (80.85%), Postives = 83/94 (88.30%), Query Frame = 1 

		  

Query: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60
          MAMTL KLRSGVQSA+R GRSS++++RSFSSSSHHD  YEAKEA+KWEKISYLGIV CT 
Sbjct: 1  MAMTLGKLRSGVQSAIRSGRSSDLLKRSFSSSSHHDEAYEAKEAAKWEKISYLGIVSCTV 60

Query: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
           AIY LSK HHH+ EPPAYPYMHIRNKEFPWG D
Sbjct: 61 LAIYTLSKGHHHYDEPPAYPYMHIRNKEFPWGPD 94
[Close]
BLAST of Spo24868.1 vs. NCBI nr
Match: gi|802646197|ref|XP_012079484.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Jatropha curcas])

HSP 1 Score: 121.7 bits (304), Expect = 7.200e-25
Identity = 60/93 (64.52%), Postives = 70/93 (75.27%), Query Frame = 1 

		  

Query: 3  MTLTKLRSGVQSAVRVG-RSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAF 62
          M    +RSG+++A+R G + S   +R FSSS+HHD  YEA EASKWEKI+YLGI  CT  
Sbjct: 1  MASAMMRSGLRNALRGGSKVSAPPKRRFSSSAHHDEAYEAAEASKWEKITYLGIATCTIL 60

Query: 63 AIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
          AIYNLSK H H  EPPAYPY+HIRNKEFPWG D
Sbjct: 61 AIYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPD 93
[Close]
BLAST of Spo24868.1 vs. NCBI nr
Match: gi|255582409|ref|XP_002531993.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Ricinus communis])

HSP 1 Score: 120.9 bits (302), Expect = 1.200e-24
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 1 

		  

Query: 3  MTLTKLRSGVQSAVRVG-RSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAF 62
          M    +RSG+++A+R G + S  ++R FSSS+HHD  YEA EASKWEKI+Y+ I  C+  
Sbjct: 1  MATALMRSGLRNALRGGSKPSAPLKRRFSSSAHHDDAYEAAEASKWEKITYVAIASCSIL 60

Query: 63 AIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
          AIYNLSK H H  EPPAYPYMHIRNKEFPWG D
Sbjct: 61 AIYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPD 93
[Close]
BLAST of Spo24868.1 vs. NCBI nr
Match: gi|643722257|gb|KDP32136.1| (hypothetical protein JCGZ_12597 [Jatropha curcas])

HSP 1 Score: 118.6 bits (296), Expect = 6.100e-24
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 1 

		  

Query: 3   MTLTKLRSGVQSAVRVG-RSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAF 62
           M    +RSG+++A+R G + S   +R FSSS+HHD  YEA EASKWEKI+YLGI  CT  
Sbjct: 1   MASAMMRSGLRNALRGGSKVSAPPKRRFSSSAHHDEAYEAAEASKWEKITYLGIATCTIL 60

Query: 63  AIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMDLMVFL 100
           AIYNLSK H H  EPPAYPY+HIRNKEFPW   ++V +
Sbjct: 61  AIYNLSKGHPHHEEPPAYPYLHIRNKEFPWVNQVLVLV 98
[Close]
BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXX9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015460 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.400e-46
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

		  

Query: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60
          MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA
Sbjct: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60

Query: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
          FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWG D
Sbjct: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGPD 94
[Close]
BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9W8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g137250 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.400e-37
Identity = 76/94 (80.85%), Postives = 83/94 (88.30%), Query Frame = 1 

		  

Query: 1  MAMTLTKLRSGVQSAVRVGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 60
          MAMTL KLRSGVQSA+R GRSS++++RSFSSSSHHD  YEAKEA+KWEKISYLGIV CT 
Sbjct: 1  MAMTLGKLRSGVQSAIRSGRSSDLLKRSFSSSSHHDEAYEAKEAAKWEKISYLGIVSCTV 60

Query: 61 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
           AIY LSK HHH+ EPPAYPYMHIRNKEFPWG D
Sbjct: 61 LAIYTLSKGHHHYDEPPAYPYMHIRNKEFPWGPD 94
[Close]
BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Match: B9T167_RICCO (Cytochrome-c oxidase, putative OS=Ricinus communis GN=RCOM_0338910 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.600e-25
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 1 

		  

Query: 3  MTLTKLRSGVQSAVRVG-RSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAF 62
          M    +RSG+++A+R G + S  ++R FSSS+HHD  YEA EASKWEKI+Y+ I  C+  
Sbjct: 1  MATALMRSGLRNALRGGSKPSAPLKRRFSSSAHHDDAYEAAEASKWEKITYVAIASCSIL 60

Query: 63 AIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
          AIYNLSK H H  EPPAYPYMHIRNKEFPWG D
Sbjct: 61 AIYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPD 93
[Close]
BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Match: A0A067K7C1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12597 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.300e-24
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 1 

		  

Query: 3   MTLTKLRSGVQSAVRVG-RSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTAF 62
           M    +RSG+++A+R G + S   +R FSSS+HHD  YEA EASKWEKI+YLGI  CT  
Sbjct: 1   MASAMMRSGLRNALRGGSKVSAPPKRRFSSSAHHDEAYEAAEASKWEKITYLGIATCTIL 60

Query: 63  AIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMDLMVFL 100
           AIYNLSK H H  EPPAYPY+HIRNKEFPW   ++V +
Sbjct: 61  AIYNLSKGHPHHEEPPAYPYLHIRNKEFPWVNQVLVLV 98
[Close]
BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Match: C6SWW6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G157000 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.300e-24
Identity = 59/94 (62.77%), Postives = 74/94 (78.72%), Query Frame = 1 

		  

Query: 3  MTLTKLRSG-VQSAVRV-GRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 62
          M  + +RSG ++SA+R   RSS++ +R+F+SS HHD   +A E +KWEKI+YLGIVGCT 
Sbjct: 1  MATSLVRSGFLRSALRGRARSSQVPKRNFASSGHHD---DAYETAKWEKITYLGIVGCTG 60

Query: 63 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
           A+YNLSK H HF EPPAYPY+HIRNKEFPWG D
Sbjct: 61 LAVYNLSKGHPHFKEPPAYPYLHIRNKEFPWGPD 91
[Close]
BLAST of Spo24868.1 vs. ExPASy Swiss-Prot
Match: COX6A_ARATH (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana GN=COX6A PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.700e-21
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 1 

		  

Query: 3  MTLTKLRSGVQSAVR--VGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 62
          M    +RS +  AV     ++S   +R+FSSS+ HD   +A EA+KWEKI+YLGI  CTA
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHD---DAYEAAKWEKITYLGIASCTA 60

Query: 63 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
           A+Y LSK HHH  +PPAYP+MHIRNKEFPWG D
Sbjct: 61 LAVYVLSKGHHHGEDPPAYPHMHIRNKEFPWGPD 91
[Close]
BLAST of Spo24868.1 vs. TAIR (Arabidopsis)
Match: AT4G37830.1 (cytochrome c oxidase-related)

HSP 1 Score: 103.2 bits (256), Expect = 9.400e-23
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 1 

		  

Query: 3  MTLTKLRSGVQSAVR--VGRSSEIIRRSFSSSSHHDIEYEAKEASKWEKISYLGIVGCTA 62
          M    +RS +  AV     ++S   +R+FSSS+ HD   +A EA+KWEKI+YLGI  CTA
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHD---DAYEAAKWEKITYLGIASCTA 60

Query: 63 FAIYNLSKPHHHFPEPPAYPYMHIRNKEFPWGMD 95
           A+Y LSK HHH  +PPAYP+MHIRNKEFPWG D
Sbjct: 61 LAVYVLSKGHHHGEDPPAYPHMHIRNKEFPWGPD 91
The following BLAST results are available for this feature:
BLAST of Spo24868.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902236457|gb|KNA24395.1|2.0e-4698.9hypothetical protein SOVF_0154... [more]
gi|731339302|ref|XP_010680777.1|6.3e-3780.8PREDICTED: cytochrome c oxidas... [more]
gi|802646197|ref|XP_012079484.1|7.2e-2564.5PREDICTED: cytochrome c oxidas... [more]
gi|255582409|ref|XP_002531993.1|1.2e-2462.3PREDICTED: cytochrome c oxidas... [more]
gi|643722257|gb|KDP32136.1|6.1e-2460.2hypothetical protein JCGZ_1259... [more]
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BLAST of Spo24868.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXX9_SPIOL1.4e-4698.9Uncharacterized protein OS=Spi... [more]
A0A0J8C9W8_BETVU4.4e-3780.8Uncharacterized protein OS=Bet... [more]
B9T167_RICCO8.6e-2562.3Cytochrome-c oxidase, putative... [more]
A0A067K7C1_JATCU4.3e-2460.2Uncharacterized protein OS=Jat... [more]
C6SWW6_SOYBN4.3e-2462.7Uncharacterized protein OS=Gly... [more]
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BLAST of Spo24868.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COX6A_ARATH1.7e-2156.3Cytochrome c oxidase subunit 6... [more]
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BLAST of Spo24868.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G37830.19.4e-2356.3cytochrome c oxidase-related[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001349Cytochrome c oxidase, subunit VIaPRODOMPD006036coord: 47..92
score: 0
IPR001349Cytochrome c oxidase, subunit VIaGENE3D4.10.95.10coord: 38..92
score: 6.8
IPR001349Cytochrome c oxidase, subunit VIaPANTHERPTHR11504CYTOCHROME C OXIDASE POLYPEPTIDE VIAcoord: 15..92
score: 5.7
IPR001349Cytochrome c oxidase, subunit VIaPFAMPF02046COX6Acoord: 25..92
score: 4.
IPR001349Cytochrome c oxidase, subunit VIaunknownSSF81411Mitochondrial cytochrome c oxidase subunit VIacoord: 38..92
score: 6.54

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0008361 regulation of cell size
biological_process GO:0008152 metabolic process
biological_process GO:0006412 translation
biological_process GO:0010015 root morphogenesis
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0007389 pattern specification process
biological_process GO:0009926 auxin polar transport
biological_process GO:0048653 anther development
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005840 ribosome
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo244930.70Barchart | Table
Spo094600.66Barchart | Table
Spo100120.66Barchart | Table