Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGAGCACCCCAAAATCTGTTTGAGGATGGTTTCGCAGCAGAGAAGCTTTTCAATCAGGGCTATTCATATACCTATGATGATGTTATCTTTCTCCCTCATTACATTGATTTCCCTACTGATGCAGTTGAGCTTCATACCAAGCTTACAAAAAACATTTCTCTATCTATCCCTTGTGTCTCCTCCCCTATGGACACCGTCACTGAGTCTTACATGGCGGTAGCCATGGCCGCCCTTGGTGGGATTGGTATATTGCACTCCAACAACACCCCCTCTGAGCAATTCTCTCTCCTCCAATCTGCCAAGTCCCGCCGCATCCCTTTTGTTTCAGACTTTGAGATCAAATCCCCGTCAGATGTGATTGAATCAGAGAGTGATTTTGGTTCGTCGAGTGTGATTTTGGTTACCGAGACAGGGAACAGGAAGTCAAGGGTTATGGGTTATGTGTTAAAATCTGATTGGGTGAGCTTGAAGAATAAGGATGGCAGAGTTTGTGATTACATGTTAAAATTGGATTTTTCAGTGCCAAATAGCTATGATTTGGACCAAATTGCTGGGTTTTTGGGCGAGAAAGGGGTTAAATTGGTGCCAACTGTGAGAGAGACTGATGGTGAAGTTGTCGATTTGATGACATTGGAGGATATAGAGAGGTTTCAAGAACTACCAAAGAGAGGTTTGCCTTCTTTAGCATCAAATGGGGAGTTCTTGGTGGGGGCTGCAATAGGGACCAGAGAATCAGATAAGGAGAGGTTGGAATATTTGGTCAAGGGTGGGGTTAATGCTGTCGTGTTGGATAGCTCTCAAGGGAATTCTATTTATCAGCTGGATATGATAAAGTATATAAAGAAGACTTACCCAGAATTGGATGTCATTGGAGGGAATGTGGTGACTAAATATCAAGCTCAAAACTTGATTCAAGCAGGAGTTGATGGACTAAGAGTTGGCATGGGATCTGGGTCAATTTGTACCACTCAGGAAGTCTGTGCAGTGGGAAGAGGACAGGTAATTTCAGTACTTTGTGTGCTTTATCTTTGTTAAGGTGAAGACCAAGTTGACTATTTTTCTAGTGATTTCGGATTTATACAAAATGTGAAATGTTGTCATATGGAATGATGTAGCTGCTTCTGATTGTTGTGTACTGTGAATTTTCTTTATTTTCGTGATGGGACTGCATCCGTTTTCTTTCTCCTTATTGACTGGGGAGGGATAGGCATAGGCTTGATATCCGCCAGTTTCTATCAAAATAATCAGATTTGTCTGGTGTAAAGGTATTTATAATGGAAGCATTACTGGTAGTTTATCGTCAGATGTAGTACATTTTATGTGAGAGAAGACCACTCACGAGACTATGCAGCTGTTATTTGCTTCAGATTGGTTTTAGGTAGAAACAATCAAACAAATATTAAAACCTTGGGAGGCAGTCATCATTTTACACTCTGTTTTCAAATAAACAAAGCTAAATGGATTTCCTTCTGTCTAAAGTTACCTTTTATCTGAGCTCAAAATGCTTGCATGACTTGAGTCCTGAGGTTCTGAAGGTTGCTTCACTTGTTTTTTTTTTCTTTATTTTATACTTTTGATTTTTAGCAAACTATATCACTGAAAATCTTTCTTGGATGCTTAGGCTACTGCTGTGTACAAAGTTTCATCTGTTGCCGCACAATGTGGTGTCCCTGTCATAGCTGATGGGGGCATATCAAACTCCGGTCACATTGTTAAGGCCCTGGTTCTTGGGGCATCTACTGTGATGATGGGAAGCTATCTGGCTGGTAGCACTGAGGCTCCTGGTGCTTATGTGGTTCAGGTACATCTTGCTGCATGTTTGTTTTTCTCTCCTAGTCTGTTAGCTCAAAAGTGTCCTAAAATTTGACGTTTATACCCTAAAGAATCTATTATTTGATGTATTTGAGATAATATTCTTGTTTAGGATGGTCGCCGTCTTAAGAAATATCGAGGCATGGGTTCTCTGGAAGCAATGACAAAAGGAAGTGATCAACGTTATCTCGGGGACAAGTCTAAGCTTAAAATTGCACAAGGTGTTGTTGGAGCTGTTGCAGATAAGGGTTCAGTTCTAAAGTTTGTGCCTTACGCGATGCATGCAGTTAAACAAGGGTTCCAGGATCTTGGTGCCTCATCGCTTCAGTCGGCCCATGATCTTTTGAGATCAGAAGTATTAAGACTTGAGGTATGGTATGCTTTTATTATTTGTTGTTGTATTCAGTAGAGCTTCTGTTTGCTCATGAGATCTGAAGTGTTTGAATGGTCTTGTTTATAGGCTCGAACTGGTGCAGCACAAGTTGAAGGCGGAGTGCATGGCTTGGTATCGTATGAGAAGAAATCATTTTAG ATGGCAGGAGCACCCCAAAATCTGTTTGAGGATGGTTTCGCAGCAGAGAAGCTTTTCAATCAGGGCTATTCATATACCTATGATGATGTTATCTTTCTCCCTCATTACATTGATTTCCCTACTGATGCAGTTGAGCTTCATACCAAGCTTACAAAAAACATTTCTCTATCTATCCCTTGTGTCTCCTCCCCTATGGACACCGTCACTGAGTCTTACATGGCGGTAGCCATGGCCGCCCTTGGTGGGATTGGTATATTGCACTCCAACAACACCCCCTCTGAGCAATTCTCTCTCCTCCAATCTGCCAAGTCCCGCCGCATCCCTTTTGTTTCAGACTTTGAGATCAAATCCCCGTCAGATGTGATTGAATCAGAGAGTGATTTTGGTTCGTCGAGTGTGATTTTGGTTACCGAGACAGGGAACAGGAAGTCAAGGGTTATGGGTTATGTGTTAAAATCTGATTGGGTGAGCTTGAAGAATAAGGATGGCAGAGTTTGTGATTACATGTTAAAATTGGATTTTTCAGTGCCAAATAGCTATGATTTGGACCAAATTGCTGGGTTTTTGGGCGAGAAAGGGGTTAAATTGGTGCCAACTGTGAGAGAGACTGATGGTGAAGTTGTCGATTTGATGACATTGGAGGATATAGAGAGGTTTCAAGAACTACCAAAGAGAGGTTTGCCTTCTTTAGCATCAAATGGGGAGTTCTTGGTGGGGGCTGCAATAGGGACCAGAGAATCAGATAAGGAGAGGTTGGAATATTTGGTCAAGGGTGGGGTTAATGCTGTCGTGTTGGATAGCTCTCAAGGGAATTCTATTTATCAGCTGGATATGATAAAGTATATAAAGAAGACTTACCCAGAATTGGATGTCATTGGAGGGAATGTGGTGACTAAATATCAAGCTCAAAACTTGATTCAAGCAGGAGTTGATGGACTAAGAGTTGGCATGGGATCTGGGTCAATTTGTACCACTCAGGAAGTCTGTGCAGTGGGAAGAGGACAGGCTACTGCTGTGTACAAAGTTTCATCTGTTGCCGCACAATGTGGTGTCCCTGTCATAGCTGATGGGGGCATATCAAACTCCGGTCACATTGTTAAGGCCCTGGTTCTTGGGGCATCTACTGTGATGATGGGAAGCTATCTGGCTGGTAGCACTGAGGCTCCTGGTGCTTATGTGGTTCAGGATGGTCGCCGTCTTAAGAAATATCGAGGCATGGGTTCTCTGGAAGCAATGACAAAAGGAAGTGATCAACGTTATCTCGGGGACAAGTCTAAGCTTAAAATTGCACAAGGTGTTGTTGGAGCTGTTGCAGATAAGGGTTCAGTTCTAAAGTTTGTGCCTTACGCGATGCATGCAGTTAAACAAGGGTTCCAGGATCTTGGTGCCTCATCGCTTCAGTCGGCCCATGATCTTTTGAGATCAGAAGTATTAAGACTTGAGGCTCGAACTGGTGCAGCACAAGTTGAAGGCGGAGTGCATGGCTTGGTATCGTATGAGAAGAAATCATTTTAG ATGGCAGGAGCACCCCAAAATCTGTTTGAGGATGGTTTCGCAGCAGAGAAGCTTTTCAATCAGGGCTATTCATATACCTATGATGATGTTATCTTTCTCCCTCATTACATTGATTTCCCTACTGATGCAGTTGAGCTTCATACCAAGCTTACAAAAAACATTTCTCTATCTATCCCTTGTGTCTCCTCCCCTATGGACACCGTCACTGAGTCTTACATGGCGGTAGCCATGGCCGCCCTTGGTGGGATTGGTATATTGCACTCCAACAACACCCCCTCTGAGCAATTCTCTCTCCTCCAATCTGCCAAGTCCCGCCGCATCCCTTTTGTTTCAGACTTTGAGATCAAATCCCCGTCAGATGTGATTGAATCAGAGAGTGATTTTGGTTCGTCGAGTGTGATTTTGGTTACCGAGACAGGGAACAGGAAGTCAAGGGTTATGGGTTATGTGTTAAAATCTGATTGGGTGAGCTTGAAGAATAAGGATGGCAGAGTTTGTGATTACATGTTAAAATTGGATTTTTCAGTGCCAAATAGCTATGATTTGGACCAAATTGCTGGGTTTTTGGGCGAGAAAGGGGTTAAATTGGTGCCAACTGTGAGAGAGACTGATGGTGAAGTTGTCGATTTGATGACATTGGAGGATATAGAGAGGTTTCAAGAACTACCAAAGAGAGGTTTGCCTTCTTTAGCATCAAATGGGGAGTTCTTGGTGGGGGCTGCAATAGGGACCAGAGAATCAGATAAGGAGAGGTTGGAATATTTGGTCAAGGGTGGGGTTAATGCTGTCGTGTTGGATAGCTCTCAAGGGAATTCTATTTATCAGCTGGATATGATAAAGTATATAAAGAAGACTTACCCAGAATTGGATGTCATTGGAGGGAATGTGGTGACTAAATATCAAGCTCAAAACTTGATTCAAGCAGGAGTTGATGGACTAAGAGTTGGCATGGGATCTGGGTCAATTTGTACCACTCAGGAAGTCTGTGCAGTGGGAAGAGGACAGGCTACTGCTGTGTACAAAGTTTCATCTGTTGCCGCACAATGTGGTGTCCCTGTCATAGCTGATGGGGGCATATCAAACTCCGGTCACATTGTTAAGGCCCTGGTTCTTGGGGCATCTACTGTGATGATGGGAAGCTATCTGGCTGGTAGCACTGAGGCTCCTGGTGCTTATGTGGTTCAGGATGGTCGCCGTCTTAAGAAATATCGAGGCATGGGTTCTCTGGAAGCAATGACAAAAGGAAGTGATCAACGTTATCTCGGGGACAAGTCTAAGCTTAAAATTGCACAAGGTGTTGTTGGAGCTGTTGCAGATAAGGGTTCAGTTCTAAAGTTTGTGCCTTACGCGATGCATGCAGTTAAACAAGGGTTCCAGGATCTTGGTGCCTCATCGCTTCAGTCGGCCCATGATCTTTTGAGATCAGAAGTATTAAGACTTGAGGCTCGAACTGGTGCAGCACAAGTTGAAGGCGGAGTGCATGGCTTGGTATCGTATGAGAAGAAATCATTTTAG MAGAPQNLFEDGFAAEKLFNQGYSYTYDDVIFLPHYIDFPTDAVELHTKLTKNISLSIPCVSSPMDTVTESYMAVAMAALGGIGILHSNNTPSEQFSLLQSAKSRRIPFVSDFEIKSPSDVIESESDFGSSSVILVTETGNRKSRVMGYVLKSDWVSLKNKDGRVCDYMLKLDFSVPNSYDLDQIAGFLGEKGVKLVPTVRETDGEVVDLMTLEDIERFQELPKRGLPSLASNGEFLVGAAIGTRESDKERLEYLVKGGVNAVVLDSSQGNSIYQLDMIKYIKKTYPELDVIGGNVVTKYQAQNLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSVAAQCGVPVIADGGISNSGHIVKALVLGASTVMMGSYLAGSTEAPGAYVVQDGRRLKKYRGMGSLEAMTKGSDQRYLGDKSKLKIAQGVVGAVADKGSVLKFVPYAMHAVKQGFQDLGASSLQSAHDLLRSEVLRLEARTGAAQVEGGVHGLVSYEKKSF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24899.1 vs. NCBI nr
Match: gi|902233627|gb|KNA23125.1| (hypothetical protein SOVF_027690 [Spinacia oleracea]) HSP 1 Score: 979.9 bits (2532), Expect = 1.600e-282 Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1
BLAST of Spo24899.1 vs. NCBI nr
Match: gi|902209008|gb|KNA16071.1| (hypothetical protein SOVF_092490 [Spinacia oleracea]) HSP 1 Score: 909.1 bits (2348), Expect = 3.500e-261 Identity = 465/504 (92.26%), Postives = 488/504 (96.83%), Query Frame = 1
BLAST of Spo24899.1 vs. NCBI nr
Match: gi|731318116|ref|XP_010669549.1| (PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 879.4 bits (2271), Expect = 3.000e-252 Identity = 444/497 (89.34%), Postives = 476/497 (95.77%), Query Frame = 1
BLAST of Spo24899.1 vs. NCBI nr
Match: gi|731318118|ref|XP_010669550.1| (PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 877.9 bits (2267), Expect = 8.700e-252 Identity = 443/495 (89.49%), Postives = 475/495 (95.96%), Query Frame = 1
BLAST of Spo24899.1 vs. NCBI nr
Match: gi|731318122|ref|XP_010669553.1| (PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 763.5 bits (1970), Expect = 2.400e-217 Identity = 387/432 (89.58%), Postives = 415/432 (96.06%), Query Frame = 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUD6_SPIOL (Inosine-5'-monophosphate dehydrogenase OS=Spinacia oleracea GN=SOVF_027690 PE=3 SV=1) HSP 1 Score: 979.9 bits (2532), Expect = 1.100e-282 Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R992_SPIOL (Inosine-5'-monophosphate dehydrogenase OS=Spinacia oleracea GN=SOVF_092490 PE=3 SV=1) HSP 1 Score: 909.1 bits (2348), Expect = 2.500e-261 Identity = 465/504 (92.26%), Postives = 488/504 (96.83%), Query Frame = 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FP67_BETVU (Inosine-5'-monophosphate dehydrogenase OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035580 PE=3 SV=1) HSP 1 Score: 877.9 bits (2267), Expect = 6.100e-252 Identity = 443/495 (89.49%), Postives = 475/495 (95.96%), Query Frame = 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Match: L0BUU2_CAMSI (Inosine-5'-monophosphate dehydrogenase OS=Camellia sinensis GN=TIDH1 PE=3 SV=1) HSP 1 Score: 728.8 bits (1880), Expect = 4.600e-207 Identity = 370/499 (74.15%), Postives = 429/499 (85.97%), Query Frame = 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Match: L0BUM6_CAMSI (Inosine-5'-monophosphate dehydrogenase OS=Camellia sinensis GN=TIDH PE=2 SV=1) HSP 1 Score: 728.4 bits (1879), Expect = 5.900e-207 Identity = 370/499 (74.15%), Postives = 429/499 (85.97%), Query Frame = 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Match: IMDH2_ARATH (Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana GN=At1g16350 PE=1 SV=1) HSP 1 Score: 684.1 bits (1764), Expect = 1.200e-195 Identity = 355/501 (70.86%), Postives = 416/501 (83.03%), Query Frame = 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Match: IMDH1_ARATH (Inosine-5'-monophosphate dehydrogenase 1 OS=Arabidopsis thaliana GN=IMPDH PE=2 SV=1) HSP 1 Score: 667.5 bits (1721), Expect = 1.100e-190 Identity = 353/501 (70.46%), Postives = 410/501 (81.84%), Query Frame = 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Match: IMDH_VIGUN (Inosine-5'-monophosphate dehydrogenase OS=Vigna unguiculata GN=impdh PE=1 SV=1) HSP 1 Score: 659.8 bits (1701), Expect = 2.300e-188 Identity = 343/496 (69.15%), Postives = 403/496 (81.25%), Query Frame = 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Match: IMDH_DICDI (Inosine-5'-monophosphate dehydrogenase OS=Dictyostelium discoideum GN=impdh PE=1 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 6.700e-127 Identity = 256/497 (51.51%), Postives = 330/497 (66.40%), Query Frame = 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Match: IMDH2_RAT (Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus GN=Impdh2 PE=1 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 2.100e-125 Identity = 265/514 (51.56%), Postives = 333/514 (64.79%), Query Frame = 1
BLAST of Spo24899.1 vs. TAIR (Arabidopsis)
Match: AT1G16350.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 684.1 bits (1764), Expect = 6.500e-197 Identity = 355/501 (70.86%), Postives = 416/501 (83.03%), Query Frame = 1
BLAST of Spo24899.1 vs. TAIR (Arabidopsis)
Match: AT1G79470.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 667.5 bits (1721), Expect = 6.300e-192 Identity = 353/501 (70.46%), Postives = 410/501 (81.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24899.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo24899.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo24899.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo24899.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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