Spo24962 (gene)

Overview
NameSpo24962
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGRF1-INTERACTING FACTOR 1 family protein
LocationSpoScf_01128 : 23819 .. 28561 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCCTCTTTATATATCTCACTGTCTTCTCAGTGTCAATCCCTGTGTTCGTCTTCCAGTAGAGAGAGAAACAGCAGTAGGAGTAATAGCAGTAGCAGCATCTCTTCCCACTGCTATTTCAGAGTGTGAAAAAAAAAAAAGAGTTTCTATTAAATTTTTGTTAGAAATTTGAATTTCTGGTGGGGGTGGCCGATATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATAACTCTAACAACGTCACTACTGATCACATTCAACAGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTGCTCTCTTTCCCTCTCTCGTTACTCCCTCCGTCCCACTAAGATTGCCGTATCATAATCTTAGGGGGCCATAAGGAGTTTTTGTTATAGATACTTCAAGTTATTTGTAGCTCGCCTAATATCTCTTCCATTTTATTTTGTTTGCCAATAATTTTCTCTTCTTTGTGGAGTACTAAAAATGTTTCAATTTGACCAAATAGTTGCACCTAAATTTTCTTTTTGGTGGTAGCTGGGGATATCTTCATGTTCTTTGTTAATCATTCTTTGAGTGCCTTTCAAGTTTTAATACAAACTCTTTTAAGTGTTTATTTTCATCATTAATCTCTCCTCTTAAAATTCATTTTCAAAAATGATAAATCACTTCCTATCTTCCTTGTATGTATTTATGTACTAAAGGAATTTTCCCTTCCCCCCCTTTTTTTTGTTGTGTGAATATGTCAGATTTTACTTTTTTTTATTTTGAGGGTCCAGATTATGTACTATGTTACCAACAAGTTGTTCTCAAATTTACAATAGGCGATTTCTATCGTACAACCGGTTATCAAGTGGGTAATCTGAGTGCACGATATTCTTTTTCTATTTTTTTTAAAACACTACTGTATATTTTATGGCCATGGTAATTTTTTTTAAACTTGGATCTTAATATTTCCCCTTTAAAATTTTGGCATTCTAATAATTTTGCTGTCACGGGTCATAATCAATGTATGAGTATTTATCTTAGAAAGGCATGATTGATAAGTAGTTATAATAATGTTTATATGCACACTTTTATAATTGAGTAAATAAGTTTCCCCCACCTCTCCTGTTTTTTTGTTTGTGACATATTTGCCACTTCATTATATTTTTGAAAAGGCAAGACTTCTAAAGAATCTAGTTTTTGCATGCGCCTTTTTGTTGTTGTGTGTGTATGTCACTCTCTTGTTTATGCTTTTACAACATTTTCTACTTTTTAGCTCGTCATACCTATACCAATAATATTTATGTTAATCATGTTAATCACATAGATACGAGATTAACTAAACGTGTCATATTAAAAACAAATAAAGAACACACGACACAATATAAGTCGTATGATAATTAGAACTATGGTGCTTTACTGTGACCAATAGTTCTTGTAGATTGCCGTATATTTAGTTTTGGCTCTTCATAGATTTGTAAATTTAGTTGGGGGTTGATACTAACCTTTTTTATATTTTTATATTGTTTAATTAAAAACTGTTTTGACTGAGTAGGTTAATTATTCATATAACACCTTGACCTTACCTTCAATGTAATATGTTTACATTCCACTTCACAAGCCCGTAAAGATGCGAAAGTTTTATTTAGGGCCCGGCCTGTCGTAAAAAAAAAAAAAAAGTAATTCATTGAATACGAAAATATGTTTGAAAACATTGATTTAATGTGGGTAGACTACTCGCTGGATAGATGAAGTACTTTGTAACGCTAACGAATATATGATAAAAACATGGGTAATGATAAAGGTCGCAAGTTGCGACAACATTTAGTTGTCGCAATCTTACATGTCGCAGTTTAATTGGTACATATAAGCGCCACGTATGCTATGCGTCATCATAAATATTTTACTATCAATGCAATATTTTTACTATAAAAATATATAAATTAGGTAATCGATGTAAAGAAGGAAACAAATCAGAATATTAAGATTTTCCTACCTTTTTTTGAAACATATATAATAGATTATATAAGTTAAATATTTTAGTTTCCAATTTAAATCATTACACATAAGTATGCCATGTCATCATTGTGACACGGCTTAAAGGTCGCATGTTGCGACCTTTATCATTTTCGTAAAAACATTTATATGATAAAAACATTTTGTATGATTTGATATTTTTCATGTGTTGATGTAGCATAAGAAGAGAGTTGTCAATAGTTGCAATACAACTAAAGCATGTGTTCTATTTGAATGCAAGTAGACTGTAGTGACTAGTGAGTAGAGTCTTAACACAGTTGTAAATGCAATTTGTTATTGCAACTCACTTTCATTTAAAATTTGATGTTGAAGTAACAGGCTCAGGTACATGCCACGTGTATGGTTGGGGAAGGTGGAATAATGTAGTGGGGTGCAGGTGTAGGGGTGTATTTCCATGCACCACGACAAAGTGTATAGGGGGGAAGAAGTAGGGAGTACTTCGGGAGTATAAATTATAAATGATGATTAACTAACTTGTATCCATAAATGGGTTGAATTCAACATGAACCAATGGTTCTTATGAAAATATTGACTGATTGGACTGATCATATATGCAAAATTGGAAATCTTTTCATTTTTGGTTTTTGTAAAGAAAATGGTAAAATTTTGTTGGCTTTTTGGCAAACAGTTTAATGCTGTACAAGTTCATTGTGTTGAGTCAGAATTCTCAAGTATGGTACAAATGAATAGGGTATGTGCTTTTGACCAACAGATATTAAGAGGATTGACTATGGTGTAATTATTTTGAGCTGGTTGGTTGGTGGAGTGGTGTGTGTAGAGTAACCTTATGTTACTCCTCACCATTTATTTCACCTTAAGTAAGATAATTGTAGCAATAACCTGTAATTGAACCATGCTACAAAGGTACTTAACTACTTGGTTGTGTATTGTATTTGTGGTGTAACGTGTTGCCTTAAATGATTAATTAATGTTCTTAAGAAGCAATATCTGCGGGGTTTATCCTCCATAATGATTAATTAAGTAAGCATCTTAAATTCAGTATCCATCGTACAATACTGGCAAGCAGCTTGATTATTGCTGGCATGCTGCTCTACCATAAGAGCATGGTTCAACTCCTGGACTAAGATCTCCCTTTTGGTCCAAACTTGCCTTTTCCGGCAGGTTGAACATTTTGATCCTGGACCACATTTTTACAAATGGGAAAATAAAATGTGATTAAACTTTGTCAGTATAATCATTGAAGAAACAAACCTCAAATCCACTGTTATGAAGCTTTAGCCTTTAGGTGTGGGCTCCTTTAATGGTCTTCACATATTCATCAGTTATAACATCTTTTTTTGATGCCCTTATAAGAATTCCAGTTAACCCTTCTTTTGTAAAGGAGCCTATGTCAGTATTCTTCCTTAATTTTTTTTATAAAAATGTCATCATTTTTTCTGCCCCCTTGTTAAATGGATTGAAAGAAAATGTGTAAAAGCAGCAACAAATAATGCAAATAAAAGAGTGAAAAAGTATCTAGCCTAGATCAGTTATTGTTTCTGGTAAATGATATGAGTTTCATGGGAGCTTTTAAGCCTTTAATCATGAAAGGTGATGTCATTTTGTTGATTTTACTTATGAGTATAAGGAGAATGCTTGATGACATTAGAGAAGTATGTTCGAAGCAATTAGAAGTTGATGCTGTAATTGGATGATAACTGACAATGACTGTCCTTTGACACCTATTTAGCAGCTGAGATGTCTTCCTTTTTCCCAGTGAACTTGTGGTTTTGTTATAACTTATAAGTGTGGTGCACTAGATTAGTCCAGTCATTTGGAAATACCAACTCCTCGGATTCCAATTGGATAATCTGGCGGTTGGTTATATCTTATGTCTCATATGGAAGCATTCTTTCTTGTTTAAATGTGACATTTGGATGGTTTTGATTTTGGCAGTACTTGGATGAGAACAAGTCCCTGATTCTGAAGATTGTGGAAAGCCAGAATTCTGGGAAGATCAATGAGTGTGCTGAGTAAGCTTAATTTGCAAATTTTGGGTGTTCTGACATGATTGATAGTTCTGTTTCTCTTTGCTACCATGTTATGTTATCACCAGATTCGAGTCATTGGACTAAGATAGGAAAGGATGAGGAAAGTTGGATGCAAACTAGTGTAGAAATGTATCCAGTTATTATTCATTATTGAATTGGTTTTGAAATGGTTGCAGGAACCAAGCACGGCTGCAGAGAAACCTGATGTACCTTGCTGCTATTGCTGATTCCCAGCCTCAACCTGCTAGCATGCATTCCCAGGTATAAATGATTGTTTGTTGAAGGAAAGGAAATACAAAATTGGATATGAGTCTAAAATCTGAATTCTGTTGAAAAAGCAGCAGTATGCTCAAAGCCAGATGATGCAGTCAGGGGGACATTACATGCAGCAACAGCAGCAGCAGCAGCAGCAATCAATGACACCTCAAGCCCTAATGGCAGCACGGTCTTCTATGCTTTATAGTCAGCAAGCATATCCAACACTTCAACAGAGTCAATCTCTGCATGGCGGTCAAATGGGAATGAGCTCAGCTGGTAGCTCAGGAATCAACATGCTGCAAGGTGAACCTCATAGTTCATCCACCAGTGGTATGCTTGGAGTTGGAGGAGGGTATCATGACTTTGGTCGTATCAAGCAGGACATGGGTAACTCAGAAGCCCGTGGTGGAACTTCAACCGATGGGGGTGAGGCACTCTACTTGAAGTCTGGTGATGATGGAAATTAA

mRNA sequence

CTCTCTCCTCTTTATATATCTCACTGTCTTCTCAGTGTCAATCCCTGTGTTCGTCTTCCAGTAGAGAGAGAAACAGCAGTAGGAGTAATAGCAGTAGCAGCATCTCTTCCCACTGCTATTTCAGAGTGTGAAAAAAAAAAAAGAGTTTCTATTAAATTTTTGTTAGAAATTTGAATTTCTGGTGGGGGTGGCCGATATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATAACTCTAACAACGTCACTACTGATCACATTCAACAGTACTTGGATGAGAACAAGTCCCTGATTCTGAAGATTGTGGAAAGCCAGAATTCTGGGAAGATCAATGAGTGTGCTGAGAACCAAGCACGGCTGCAGAGAAACCTGATGTACCTTGCTGCTATTGCTGATTCCCAGCCTCAACCTGCTAGCATGCATTCCCAGCAGCAGTATGCTCAAAGCCAGATGATGCAGTCAGGGGGACATTACATGCAGCAACAGCAGCAGCAGCAGCAGCAATCAATGACACCTCAAGCCCTAATGGCAGCACGGTCTTCTATGCTTTATAGTCAGCAAGCATATCCAACACTTCAACAGAGTCAATCTCTGCATGGCGGTCAAATGGGAATGAGCTCAGCTGGTAGCTCAGGAATCAACATGCTGCAAGGTGAACCTCATAGTTCATCCACCAGTGGTATGCTTGGAGTTGGAGGAGGGTATCATGACTTTGGTCGTATCAAGCAGGACATGGGTAACTCAGAAGCCCGTGGTGGAACTTCAACCGATGGGGGTGAGGCACTCTACTTGAAGTCTGGTGATGATGGAAATTAA

Coding sequence (CDS)

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATAACTCTAACAACGTCACTACTGATCACATTCAACAGTACTTGGATGAGAACAAGTCCCTGATTCTGAAGATTGTGGAAAGCCAGAATTCTGGGAAGATCAATGAGTGTGCTGAGAACCAAGCACGGCTGCAGAGAAACCTGATGTACCTTGCTGCTATTGCTGATTCCCAGCCTCAACCTGCTAGCATGCATTCCCAGCAGCAGTATGCTCAAAGCCAGATGATGCAGTCAGGGGGACATTACATGCAGCAACAGCAGCAGCAGCAGCAGCAATCAATGACACCTCAAGCCCTAATGGCAGCACGGTCTTCTATGCTTTATAGTCAGCAAGCATATCCAACACTTCAACAGAGTCAATCTCTGCATGGCGGTCAAATGGGAATGAGCTCAGCTGGTAGCTCAGGAATCAACATGCTGCAAGGTGAACCTCATAGTTCATCCACCAGTGGTATGCTTGGAGTTGGAGGAGGGTATCATGACTTTGGTCGTATCAAGCAGGACATGGGTAACTCAGAAGCCCGTGGTGGAACTTCAACCGATGGGGGTGAGGCACTCTACTTGAAGTCTGGTGATGATGGAAATTAA

Protein sequence

MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNSEARGGTSTDGGEALYLKSGDDGN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24962.1Spo24962.1mRNA


Homology
[Close]
BLAST of Spo24962.1 vs. NCBI nr
Match: gi|902222724|gb|KNA19246.1| (hypothetical protein SOVF_062520 isoform A [Spinacia oleracea])

HSP 1 Score: 376.3 bits (965), Expect = 3.400e-101
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

		  

Query: 8   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 67
           MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA
Sbjct: 1   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 60

Query: 68  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 127
           AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA
Sbjct: 61  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 120

Query: 128 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 187
           YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS
Sbjct: 121 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 180

Query: 188 EARGGTSTDGGEALYLKSGDDGN 211
           EARGGTSTDGGEALYLKSGDDGN
Sbjct: 181 EARGGTSTDGGEALYLKSGDDGN 203
[Close]
BLAST of Spo24962.1 vs. NCBI nr
Match: gi|902222725|gb|KNA19247.1| (hypothetical protein SOVF_062520 isoform B [Spinacia oleracea])

HSP 1 Score: 370.5 bits (950), Expect = 1.900e-99
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 1 

		  

Query: 8   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 67
           MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA
Sbjct: 1   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 60

Query: 68  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 127
           AIADSQPQPASMHSQQ YAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA
Sbjct: 61  AIADSQPQPASMHSQQ-YAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 120

Query: 128 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 187
           YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS
Sbjct: 121 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 180

Query: 188 EARGGTSTDGGEALYLKSGDDGN 211
           EARGGTSTDGGEALYLKSGDDGN
Sbjct: 181 EARGGTSTDGGEALYLKSGDDGN 202
[Close]
BLAST of Spo24962.1 vs. NCBI nr
Match: gi|731365967|ref|XP_010694809.1| (PREDICTED: GRF1-interacting factor 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.2 bits (801), Expect = 3.600e-82
Identity = 179/210 (85.24%), Postives = 192/210 (91.43%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGK+NECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQPA+MHS  QYAQ  MMQSG HYM QQQQQQ QSM+PQA+M ARSS
Sbjct: 61  RNLMYLAAIADSQPQPATMHS--QYAQGGMMQSGAHYM-QQQQQQAQSMSPQAMM-ARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRI 180
           MLYSQQAYPTLQQSQSLH G MGMSSAGSSG+NMLQGEPHS+++SGML    GY DFGR+
Sbjct: 121 MLYSQQAYPTLQQSQSLHAGHMGMSSAGSSGLNMLQGEPHSAASSGML----GYADFGRL 180

Query: 181 KQDMGNSEARGGTSTDGGEALYLKSGDDGN 211
           KQ+MG+SE RGGTS+DGGEALYLKSG+DGN
Sbjct: 181 KQEMGSSEGRGGTSSDGGEALYLKSGEDGN 201
[Close]
BLAST of Spo24962.1 vs. NCBI nr
Match: gi|703121167|ref|XP_010102263.1| (hypothetical protein L484_024545 [Morus notabilis])

HSP 1 Score: 255.0 bits (650), Expect = 1.200e-64
Identity = 159/227 (70.04%), Postives = 177/227 (77.97%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQP +MH+Q  Y  S MMQ G HYMQ QQ QQ   MTPQ+LMAARSS
Sbjct: 61  RNLMYLAAIADSQPQPPTMHAQ--YPSSSMMQPGAHYMQHQQAQQ---MTPQSLMAARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGR- 180
           MLY+QQ +P LQQ Q+LHG Q+GMSS GSSG++M+QG+  S+  SG LG GG + DFGR 
Sbjct: 121 MLYTQQPFPALQQ-QALHG-QLGMSSGGSSGLHMMQGDIGSAGGSGQLGAGG-FPDFGRG 180

Query: 181 -------------IKQDMGNS---EARGGTSTDGGEALYLKSGDDGN 211
                         KQD+G+S   E RGG+S DGGE LYLKS DDGN
Sbjct: 181 SAGEGLHRGMAGGSKQDIGSSGSAEGRGGSSGDGGETLYLKSADDGN 218
[Close]
BLAST of Spo24962.1 vs. NCBI nr
Match: gi|255561883|ref|XP_002521950.1| (PREDICTED: GRF1-interacting factor 1 [Ricinus communis])

HSP 1 Score: 246.1 bits (627), Expect = 5.400e-62
Identity = 156/227 (68.72%), Postives = 174/227 (76.65%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGKI+ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQP +MHSQ  ++ S +MQ G HYMQ QQ QQ   MTPQ++MAARSS
Sbjct: 61  RNLMYLAAIADSQPQPPNMHSQ--FSSSGIMQPGAHYMQHQQAQQ---MTPQSVMAARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGR- 180
           MLY+QQ Y  LQQ Q+LH  Q+GMSS GS G++MLQ E  ++  SG LG GG + DFGR 
Sbjct: 121 MLYTQQQYAALQQQQALHS-QLGMSSGGSPGLHMLQSEASTAGGSGGLGAGG-FPDFGRD 180

Query: 181 ---------IKQDMGNS---EARGGTS----TDGGEALYLKSGDDGN 211
                     KQDMGN+   E RGG S    +DGGE LYLKS D+GN
Sbjct: 181 ASGRGMAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219
[Close]
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062520 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.400e-101
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

		  

Query: 8   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 67
           MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA
Sbjct: 1   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 60

Query: 68  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 127
           AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA
Sbjct: 61  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 120

Query: 128 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 187
           YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS
Sbjct: 121 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 180

Query: 188 EARGGTSTDGGEALYLKSGDDGN 211
           EARGGTSTDGGEALYLKSGDDGN
Sbjct: 181 EARGGTSTDGGEALYLKSGDDGN 203
[Close]
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK79_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062520 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.300e-99
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 1 

		  

Query: 8   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 67
           MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA
Sbjct: 1   MQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLA 60

Query: 68  AIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 127
           AIADSQPQPASMHSQQ YAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA
Sbjct: 61  AIADSQPQPASMHSQQ-YAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSSMLYSQQA 120

Query: 128 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 187
           YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS
Sbjct: 121 YPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRIKQDMGNS 180

Query: 188 EARGGTSTDGGEALYLKSGDDGN 211
           EARGGTSTDGGEALYLKSGDDGN
Sbjct: 181 EARGGTSTDGGEALYLKSGDDGN 202
[Close]
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4N7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095740 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.500e-82
Identity = 179/210 (85.24%), Postives = 192/210 (91.43%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGK+NECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQPA+MHS  QYAQ  MMQSG HYM QQQQQQ QSM+PQA+M ARSS
Sbjct: 61  RNLMYLAAIADSQPQPATMHS--QYAQGGMMQSGAHYM-QQQQQQAQSMSPQAMM-ARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGRI 180
           MLYSQQAYPTLQQSQSLH G MGMSSAGSSG+NMLQGEPHS+++SGML    GY DFGR+
Sbjct: 121 MLYSQQAYPTLQQSQSLHAGHMGMSSAGSSGLNMLQGEPHSAASSGML----GYADFGRL 180

Query: 181 KQDMGNSEARGGTSTDGGEALYLKSGDDGN 211
           KQ+MG+SE RGGTS+DGGEALYLKSG+DGN
Sbjct: 181 KQEMGSSEGRGGTSSDGGEALYLKSGEDGN 201
[Close]
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Match: W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.000e-65
Identity = 159/227 (70.04%), Postives = 177/227 (77.97%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQP +MH+Q  Y  S MMQ G HYMQ QQ QQ   MTPQ+LMAARSS
Sbjct: 61  RNLMYLAAIADSQPQPPTMHAQ--YPSSSMMQPGAHYMQHQQAQQ---MTPQSLMAARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGR- 180
           MLY+QQ +P LQQ Q+LHG Q+GMSS GSSG++M+QG+  S+  SG LG GG + DFGR 
Sbjct: 121 MLYTQQPFPALQQ-QALHG-QLGMSSGGSSGLHMMQGDIGSAGGSGQLGAGG-FPDFGRG 180

Query: 181 -------------IKQDMGNS---EARGGTSTDGGEALYLKSGDDGN 211
                         KQD+G+S   E RGG+S DGGE LYLKS DDGN
Sbjct: 181 SAGEGLHRGMAGGSKQDIGSSGSAEGRGGSSGDGGETLYLKSADDGN 218
[Close]
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.700e-62
Identity = 156/227 (68.72%), Postives = 174/227 (76.65%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMAAYY  NNVTTDHIQQYLDENKSLILKIVESQNSGKI+ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQQQQQSMTPQALMAARSS 120
           RNLMYLAAIADSQPQP +MHSQ  ++ S +MQ G HYMQ QQ QQ   MTPQ++MAARSS
Sbjct: 61  RNLMYLAAIADSQPQPPNMHSQ--FSSSGIMQPGAHYMQHQQAQQ---MTPQSVMAARSS 120

Query: 121 MLYSQQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLGVGGGYHDFGR- 180
           MLY+QQ Y  LQQ Q+LH  Q+GMSS GS G++MLQ E  ++  SG LG GG + DFGR 
Sbjct: 121 MLYTQQQYAALQQQQALHS-QLGMSSGGSPGLHMLQSEASTAGGSGGLGAGG-FPDFGRD 180

Query: 181 ---------IKQDMGNS---EARGGTS----TDGGEALYLKSGDDGN 211
                     KQDMGN+   E RGG S    +DGGE LYLKS D+GN
Sbjct: 181 ASGRGMAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219
[Close]
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.000e-60
Identity = 150/224 (66.96%), Postives = 167/224 (74.55%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMA YY S NVT+DHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAGYYPS-NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQ--SGGHYMQQQQQQQQQSMTPQALMAAR 120
           RNLMYLAAIADSQPQP S+HSQ   A   M+Q   G HY+QQQQ  QQQ MT Q+LMAAR
Sbjct: 61  RNLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAAR 120

Query: 121 SSMLYS-----QQAYPTLQQSQSLHGGQMGMSSA----GSSGINMLQGEPHSSSTSGMLG 180
           SSMLY+     QQ Y TLQ  Q LH  Q+GMSS+    GSSG+++LQGE           
Sbjct: 121 SSMLYAQQQQQQQPYATLQH-QQLHHSQLGMSSSSGGGGSSGLHILQGE----------- 180

Query: 181 VGGGYHDFGRIKQDMGN---SEARGGTSTDGGEALYLKSGDDGN 211
             GG+HDFGR K +MG+    E RGG+S DGGE LYLKS DDGN
Sbjct: 181 -AGGFHDFGRGKPEMGSGGGGEGRGGSSGDGGETLYLKSSDDGN 210
[Close]
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.300e-15
Identity = 79/218 (36.24%), Postives = 109/218 (50.00%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQ    +  ++ ++  +NN+TT+ IQ+YLDENK LI+ I+E+QN GK+ ECA+ QA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  RNLMYLAAIADSQPQP--ASMHSQQQYAQ------SQMMQSGGHYMQQQQQQQQQSMTPQ 120
           +NLMYLAAIAD+QPQP  A++ S     Q      S M     ++MQQ Q        P 
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 ALMAARSSMLYS---QQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLG 180
            +   R  + +    Q   P  Q  Q    G MG+   G +  N LQ + H   T+    
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAAN 180

Query: 181 VGGGYHDFGRIKQDMGNSEARGGTSTDGGEALYLKSGD 208
             G     G  K D G + ++ G    GG A     GD
Sbjct: 181 NAGPNDASGGGKPD-GTNMSQSGADGQGGSAARHGGGD 217
[Close]
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.400e-14
Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 1 

		  

Query: 2   QQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQR 61
           QQ   QM PM+ +   +NN+TT+ IQ+YLDENK LI+ I+E+QN GK+ ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQPASMHSQQQYAQSQMMQSGGHYMQQQQQ-QQQQSMTPQALMAARSS 121
           NLMYLAAIAD+QP P +       A +  M +    MQ      Q    +P  + A R  
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQASPAGIFAPRGP 122

Query: 122 MLY-SQQAYPTLQQSQSLH----GGQMGMSSAG--SSGINMLQGEPHSSSTSGMLGVGGG 177
           + + S   +   QQ Q +H     G MG+   G  ++G+     +P  +   G +G+ GG
Sbjct: 123 LQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQP-ETGLGGNVGLRGG 182
[Close]
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.900e-6
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 1 

		  

Query: 21 VTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLAAIADSQPQPAS 79
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+ P   S
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIYLATIADASPTSTS 73
[Close]
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.200e-6
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1 

		  

Query: 21 VTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLAAIADS 73
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67
[Close]
BLAST of Spo24962.1 vs. TAIR (Arabidopsis)
Match: AT5G28640.1 (SSXT family protein)

HSP 1 Score: 232.3 bits (591), Expect = 2.800e-61
Identity = 150/224 (66.96%), Postives = 167/224 (74.55%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQHLMQMQPMMA YY S NVT+DHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQ
Sbjct: 1   MQQHLMQMQPMMAGYYPS-NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 60

Query: 61  RNLMYLAAIADSQPQPASMHSQQQYAQSQMMQ--SGGHYMQQQQQQQQQSMTPQALMAAR 120
           RNLMYLAAIADSQPQP S+HSQ   A   M+Q   G HY+QQQQ  QQQ MT Q+LMAAR
Sbjct: 61  RNLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAAR 120

Query: 121 SSMLYS-----QQAYPTLQQSQSLHGGQMGMSSA----GSSGINMLQGEPHSSSTSGMLG 180
           SSMLY+     QQ Y TLQ  Q LH  Q+GMSS+    GSSG+++LQGE           
Sbjct: 121 SSMLYAQQQQQQQPYATLQH-QQLHHSQLGMSSSSGGGGSSGLHILQGE----------- 180

Query: 181 VGGGYHDFGRIKQDMGN---SEARGGTSTDGGEALYLKSGDDGN 211
             GG+HDFGR K +MG+    E RGG+S DGGE LYLKS DDGN
Sbjct: 181 -AGGFHDFGRGKPEMGSGGGGEGRGGSSGDGGETLYLKSSDDGN 210
[Close]
BLAST of Spo24962.1 vs. TAIR (Arabidopsis)
Match: AT4G00850.1 (GRF1-interacting factor 3)

HSP 1 Score: 84.7 bits (208), Expect = 7.300e-17
Identity = 79/218 (36.24%), Postives = 109/218 (50.00%), Query Frame = 1 

		  

Query: 1   MQQHLMQMQPMMAAYYNSNNVTTDHIQQYLDENKSLILKIVESQNSGKINECAENQARLQ 60
           MQQ    +  ++ ++  +NN+TT+ IQ+YLDENK LI+ I+E+QN GK+ ECA+ QA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  RNLMYLAAIADSQPQP--ASMHSQQQYAQ------SQMMQSGGHYMQQQQQQQQQSMTPQ 120
           +NLMYLAAIAD+QPQP  A++ S     Q      S M     ++MQQ Q        P 
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 ALMAARSSMLYS---QQAYPTLQQSQSLHGGQMGMSSAGSSGINMLQGEPHSSSTSGMLG 180
            +   R  + +    Q   P  Q  Q    G MG+   G +  N LQ + H   T+    
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAAN 180

Query: 181 VGGGYHDFGRIKQDMGNSEARGGTSTDGGEALYLKSGD 208
             G     G  K D G + ++ G    GG A     GD
Sbjct: 181 NAGPNDASGGGKPD-GTNMSQSGADGQGGSAARHGGGD 217
[Close]
BLAST of Spo24962.1 vs. TAIR (Arabidopsis)
Match: AT1G01160.2 (GRF1-interacting factor 2)

HSP 1 Score: 63.2 bits (152), Expect = 2.300e-10
Identity = 70/217 (32.26%), Postives = 100/217 (46.08%), Query Frame = 1 

		  

Query: 2   QQHLMQMQPMMAAYYNSNNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +   +NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKINECAENQARLQRNLMYLAAIADSQPQPASMHSQQQYAQ 121
            YLDENK LI+ I+E+QN GK+ ECA+ QA LQ+NLMYLAAIAD+QP P +       A 
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 SQMMQSGGHYMQQQQQ-QQQQSMTPQALMAARSSMLY-SQQAYPTLQQSQSLH----GGQ 177
           +  M +    MQ      Q    +P  + A R  + + S   +   QQ Q +H     G 
Sbjct: 123 AAQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAMQGH 182
The following BLAST results are available for this feature:
BLAST of Spo24962.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222724|gb|KNA19246.1|3.4e-101100.hypothetical protein SOVF_0625... [more]
gi|902222725|gb|KNA19247.1|1.9e-9999.5hypothetical protein SOVF_0625... [more]
gi|731365967|ref|XP_010694809.1|3.6e-8285.2PREDICTED: GRF1-interacting fa... [more]
gi|703121167|ref|XP_010102263.1|1.2e-6470.0hypothetical protein L484_0245... [more]
gi|255561883|ref|XP_002521950.1|5.4e-6268.7PREDICTED: GRF1-interacting fa... [more]
back to top
BLAST of Spo24962.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RIB2_SPIOL2.4e-101100.Uncharacterized protein OS=Spi... [more]
A0A0K9RK79_SPIOL1.3e-9999.5Uncharacterized protein OS=Spi... [more]
A0A0J8E4N7_BETVU2.5e-8285.2Uncharacterized protein OS=Bet... [more]
W9RHN8_9ROSA8.0e-6570.0Uncharacterized protein OS=Mor... [more]
B9S7I1_RICCO3.7e-6268.7Synovial sarcoma associated ss... [more]
back to top
BLAST of Spo24962.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GIF1_ARATH5.0e-6066.9GRF1-interacting factor 1 OS=A... [more]
GIF3_ARATH1.3e-1536.2GRF1-interacting factor 3 OS=A... [more]
GIF2_ARATH2.4e-1438.2GRF1-interacting factor 2 OS=A... [more]
S18L2_HUMAN1.9e-651.7SS18-like protein 2 OS=Homo sa... [more]
S18L2_MOUSE4.2e-653.8SS18-like protein 2 OS=Mus mus... [more]
back to top
BLAST of Spo24962.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G28640.12.8e-6166.9SSXT family protein[more]
AT4G00850.17.3e-1736.2GRF1-interacting factor 3[more]
AT1G01160.22.3e-1032.2GRF1-interacting factor 2[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPANTHERPTHR23107SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEINcoord: 1..210
score: 5.6E
IPR007726SS18 familyPFAMPF05030SSXTcoord: 20..77
score: 1.7
NoneNo IPR availablePANTHERPTHR23107:SF6GRF1-INTERACTING FACTOR 1coord: 1..210
score: 5.6E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048827 phyllome development
biological_process GO:0008152 metabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo187630.68Barchart | Table
Spo152630.65Barchart | Table