Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAAGCCAAATATTATAAAGAAAGACTTGCTATAAGTGTAGAATTGGAGGCTAGCTATTCAAAATTTCAAATCAATGGCATACTTCCAATACAGGTAAAGATTAAGCTATATTTTCATGTCACTTATATATCGTATTAGTATACTGCTAAGATTATTTACTATTAATAGTTACACACTGTATTCACATTGAATCAGTGGATGTCAACTAGTTTAGTTGATAACATTTTGATTAGTTGCTATCCAGAAACTGGAATCAAATCCCTTTTACCACAATTATTTTCACCCCGTCATATGTTTGAAAGACATTATTAATCTACTTGATGAAATGCAACTTTTTTCTGGATATGTTAAATAGTACACTTCATAATTCAAACGTAATAGTGTTTTATGGTTGTGCACGTACTTTCTTTGACTTTGATGAAAGAATGATTAGTACTTATTATATGGATATTAAGAATTTGGAAAAAAAAATGTTGTGTATTAAATAGTGTAAACTTTAATTTATCTAACGTGACTAACGATAAAAACCACTAGGAAAATGATGCATGCAGTCCAATTTTAAGATTGCCTATAAAAAGTTAAAAATAAAAACATAAGCTTATACCATGAGAGTTTAGTTTCCTATATTTCATTTCTTGTACCGTAAAAATAAAACTCTTTTATATTTGGTCAACATTATGTAGTACTTGGATTACAAAAAGTCAATAAATTTTATGATAAATTGACAATTTTTGAGTTTAAACGTTGAAGTCAATGATCATACACCACTTTGACACGGCGGCTATGTTTAGCCCGTTAAACACGACAAAAAGTTGCGATTTTTTTTTTCTTTTTTCTAAAAAATAAAAAATAAAAATAAAAACGTGGTTATTTCCTTAATTTTAGTGAGGAATATCAAAATAATCCAAACACATCCCTAGAAATTATGGTACAACAAACAATAAAAATAATTATAACAATAAAAATAAAATAACAATAATAATAGTAATAATAATAATAAAAAAACACAATAAACAATAAAGTAATAAATAATAAATAAAATAAAATAAGGTACGACAATACGATGTACTATTGTATCCCTCTTGGATCGTGGTACTACGTTAGTCAATTGTATAAGATTCTATGAGTCTTACCCTCTTTTAAATCCACACTTGAATAATAAGATATGGAAGTATCCAAGAACCCGCCTCGGCTTAAAAATTTCACGATATTTTTTTATAAGATAAATTTAGATAGAATAAGATATATATGGATAAGTTTAGATAGATTTAAATAATTAATAAATTTAATAAGTCGAATAGGTCGAAACTCTAATCCTAGTATATGTTGTGTACAAGGAAAACATAGTTCGTATCAGTCGACGGTTAAATATTTGTATCGATAATCATGTGATCCGTAGAATAAAAAATAGATGTAGTGTACAATGACTACAAGTCTACAACCGTACAATTTGTCAAATGAATTACCCGTGTTATTATGGTGTGCTTAATCATGCAACTTTATTTTTTTATATTAATTTGATAAGATTATACAAGAATAATCATGCAACTTTGGTGTACCTAAACAAAGGAATGATATTGATAATTGAGTTAATAATTTGTATATCAAATATTTTATTGGATAATGTTTGGCATGACATGGAGTGTCTAGACTCTATAGCACGAATACGTACAGTCGATAAAGGTGTGCAATGTGGGCTAAAATTAGTTTTTCAATACTTCGTACTCCGTATAACACTAGAAGTCTAGAAACGAGAACTTGTCTTTGCCCAAACTTTAAAACCAAAATGTTTCTAAGTATATTCAATTACGCAAACGTACGCAACTCACATTTTCATAGCTCGATCATTGTAGGACTAGTTAAATTTAGCAGTAAATATTCACCAGATCAAAACGAAATCCCAAAAATTTTCCCTTCCTAATAAAATCTATCCCTATAATATTATAATCCAACTCATAATAGTCCGTTAATTTCTTTATTATCTTATTCCGTTCATCAAACGGTTAAACACAACAAGATAACCTTATAATTTATCTGTCTTTTGACTATTTACCCATAAAGAGTTTATACTGCATAATACACATGCACACGCCCTATAGAAAAGGGATAAAATTTTCCAATATTTAATCTCCCTCAAACTCTTTAATTTTATTTCAATAATTACCTTCCTAAATATTTGTTTGACTAGGGTTAACCAAATATTTTATTGTTGAATTGTTAAATTTAATTAAAAAAAATAATATTTTTTTATTTAATTAAAATTGTGTATAAGTGTTGGTGCATTTTAGTAAGCGTCTACCTCACAAGAATCCTAACGGACAACAACTTTCTCTCTCATCCCTTTTCTCTCTCAAGAATCCTACTTTCATCCCTCCTCTTTTCTCCTCTTTCAACCCAATTCGATTTCTTAATTCTTTTTAATTTTTCTTTTATGGGGATTTTCTAATTTTCAATATAAATATTGATGAAATTCCCCTGTTTTCATAAATAATGTGGGAAATACAATTCAAGAAGATTCTGATAATGTTTCTGGGTGGTTGTTGAATTTTTCAATTGTTTTCCTGCAAATTCATCTTCTGGGTAAATAATTTCACCAAATTAAATAATTAAATAAATTTTTCTTGAAGAAGAATGAGCGTGATATTGTGGGAAAAGCAGCAGAAAAAGGAGAAGAAAAAGAAGGAAGAAGAAGGCGGCAAACATGGAGGAGAGAGAAAGGAGGAAGACGATGTTCTAATTCCTCCTACCAATTTTTCAATGGTGGAAGATGGGCTTTACAGATCTGGGTTTCCTGATTCTTCCAATTTCGGCTTTCTCGAAACCCTAAATCTCAAGTCTATCATGTAAGTTTTTGATCTTTTGCTGATTAATTTTGTTCAATTTATGTAATTACAAGTTAATTAGTGTTGCATGATTAGTTATTAATGATTAATTTTGTTCAAATTTATGTAATTAGAGGTTAATTTCTGGTATTAATTATGTATTTTTCCCCAATGTTGTAGATATTTGTGCACTGAGCCATACCCAGAAGAGCATTTGAAGTTTCTTGAATCACATAATATTCGATTGTTCCAATTTGGAATTGAGGGGACTAAGGTATAATTTTCTCTTTTGTTTATTTGTATTCAATTGAGATTGTTCATATGATATTTTTTATTTTATTTTTCTGTAAATTTTTGGGATTTTTATTGGAAATTCCGAGTTTTTAGAGTTGTTTTCATGCTTATTAATCAATTGGTGCATGTAAATAAATTTTTATTGACCCTAATGATGAATCCAGTTTTGGGAGATGATTTTTTCTTACTTTGATTAGGGTTTAATTGATTAGTGAATTGCTGAGTTTAAATTATGTGTTTCTAGGATGATTGGACAGATAACATGATATGATCAGTTTTTTGTTGGAAGTTAACATGAGGTTTGTTATAAGTAACATTAGAACTTTGCTTATGAAAACGATACGTGGAGACGTTGCGTACTAAGATTTCGGTTTTAGTCTGTGTTTATGTGGTTTAGGTTTAAAGATTCTTACAATTAAGGTTGTTATTTGCAAATTTGGGTAACATTGATTGAAAGTTTAAAGAATGGTTATGGAGGGAGCTTGTTTAATCCTCTAAATCGCAGTCAATTTTAATGGATGGTTTATAAGTAAAGGAGCAAAAGAGATATGACCACCTTGCTATAAAGTTTGTGTGACAATCTTCTTTTTTTCGTTATTTCGTAATTTCTCCCTTTCCGGGAGTAAAAGTGGCTTGCCCTAGTTCCATGTTTCTTTGGTTTCACAATAAAATTCCGTCTTTCCTAGCATAAAGTCCACGGAGGGAAAATTTTGAAAGTTACATATGAAAAGTGGATATGTATGAGTCTTATTTGTTGATATGTTGATAATTCTTGATATGTATATGGGATCCTTTATTTGTGTATATGAAGACGTTCGTACCGTGAAATGAATTTGAGCTTTTTGACATGTGGTGGGAAGGAAGCTATTGTCTTTTTTTTTCTTTCTTTTAGAGGATCACATGAGTGGGCTTAAAAGTGGCTTTATCTCTTACCCAACATGACTAAGCTTGAGTCATTTGTGCATTGACGAATCTAATGGACCCCAAAATTGTATGGATATAGTTGGAAAAGGCAACAGAGTTTTTCAAACATCGAAACTTTTTTTCCGAGCCAAAATTTAAACTAGCTTATTGCATTGAACACTCGACTCCTTCCTGTTAAAAGAAGCAAAAACTCGAGGATCTCCGAGGATGGTTTTTATAATGTTAATCTTACAATTCATGGTTGCTGTGATCACTGATAAGGTTGTTGCATTAAATTGGAATAAGATCAGATTCTTTTATACATTTGGATGGTTTTATAATGTTAATCTTACAATTCATGGTTGCTGTGATTATAACTTATAAGGTTGTTGCATTAAATTGGAATAAGATCAGATTGTTTTGAACATTATGGTTGGTAAATGGTAATCCTTCGATAATGGGGAGGAGTTGTTAGTATAATGACTTGAAACATGAAGCAGTCATTGTATTGATTTCACCTCTAATTCTGTTTCTCGTGCATATGTAAAATGCTCTAATCCGGGAAGTAAGTTTATTATTTTCTTATGTTGTTGCTGTTACTTATGGCAGGAGACAATCCCTGAGGATGTCATCTATGAAGCTCTTAGGATTTTGATAGGTAGTTCTACGCGAACAATTACACTGTTTGTGTAAAATAATAATCCCTTGTTCACTTTTTTGACTTCCGAAGTTCATTATTCATCTAAACTTGACTTTCTTTGTTGCCCTGCAGATGTAAGAAACTACCCAATTCTGATTCACTGCAAACGTGGAAAGGTAGTAACTTCAACTCCAATCTTGTACTTGATTTTCCAACATGTCAATTATTTGTTCCCCGTTTAGTAACATCGTTGTCTTGATATCTGCAGCATCGAACCGGTTGCCTCGTTGGTTGTCTTAGGAAGTTGCAGAACTGGTGTTTGGCATCAGTTTACGAGGAATACCAGCGTTTCGCAGGTGCTAAAGCTAGGGCAAATGACATGAAGTTTATGGAGAGATACGATGTTTTGCGCATTAGACAGTCTCTTTACAGTCTCATCTACCAATACCATGGTTATGGTTCGAACAAGAGGCGGTTGCTCGACAGAGAAGACAACTTGGCGAAACCCCGGATCAAATCAAGCTAAGATAAGCCAAGTTAGAGTAGGTTTTTGACAAAACTTTTGCTTGTCAAAAATTTTTACTCTCTGATTCTTTTATACTCTAATTGGGAAAGTTTTGTTTTTGGCCGTCCTTATGCCTGCATTGTTCTTTTAAGGCAGTTTGGAACAAGTGTGGAAATATTGTTTTTTTTTCCCTTCTTTTTTTCCTTTGATTATTTTTGGTGACCATTTCCTCACGTAGGACTAATTCGAGGAAAAGAGAGAGAGAGAGAAAAGGAAAGGATGTCTTTTTACATTTTTAAATAGAAAAATTGCTGTATACCACCCCGATTTATCAATGAAAGAAAAATTTCCCATACATTGTCTCGTTCTTCATTGAATCAAAG CTCAAGCCAAATATTATAAAGAAAGACTTGCTATAAGTGTAGAATTGGAGGCTAGCTATTCAAAATTTCAAATCAATGGCATACTTCCAATACAGAATGAGCGTGATATTGTGGGAAAAGCAGCAGAAAAAGGAGAAGAAAAAGAAGGAAGAAGAAGGCGGCAAACATGGAGGAGAGAGAAAGGAGGAAGACGATGTTCTAATTCCTCCTACCAATTTTTCAATGGTGGAAGATGGGCTTTACAGATCTGGGTTTCCTGATTCTTCCAATTTCGGCTTTCTCGAAACCCTAAATCTCAAGTCTATCATATATTTGTGCACTGAGCCATACCCAGAAGAGCATTTGAAGTTTCTTGAATCACATAATATTCGATTGTTCCAATTTGGAATTGAGGGGACTAAGGAGACAATCCCTGAGGATGTCATCTATGAAGCTCTTAGGATTTTGATAGATGTAAGAAACTACCCAATTCTGATTCACTGCAAACGTGGAAAGCATCGAACCGGTTGCCTCGTTGGTTGTCTTAGGAAGTTGCAGAACTGGTGTTTGGCATCAGTTTACGAGGAATACCAGCGTTTCGCAGGTGCTAAAGCTAGGGCAAATGACATGAAGTTTATGGAGAGATACGATGTTTTGCGCATTAGACAGTCTCTTTACAGTCTCATCTACCAATACCATGGTTATGGTTCGAACAAGAGGCGGTTGCTCGACAGAGAAGACAACTTGGCGAAACCCCGGATCAAATCAAGCTAAGATAAGCCAAGTTAGAGTAGGTTTTTGACAAAACTTTTGCTTGTCAAAAATTTTTACTCTCTGATTCTTTTATACTCTAATTGGGAAAGTTTTGTTTTTGGCCGTCCTTATGCCTGCATTGTTCTTTTAAGGCAGTTTGGAACAAGTGTGGAAATATTGTTTTTTTTTCCCTTCTTTTTTTCCTTTGATTATTTTTGGTGACCATTTCCTCACGTAGGACTAATTCGAGGAAAAGAGAGAGAGAGAGAAAAGGAAAGGATGTCTTTTTACATTTTTAAATAGAAAAATTGCTGTATACCACCCCGATTTATCAATGAAAGAAAAATTTCCCATACATTGTCTCGTTCTTCATTGAATCAAAG ATGGCATACTTCCAATACAGAATGAGCGTGATATTGTGGGAAAAGCAGCAGAAAAAGGAGAAGAAAAAGAAGGAAGAAGAAGGCGGCAAACATGGAGGAGAGAGAAAGGAGGAAGACGATGTTCTAATTCCTCCTACCAATTTTTCAATGGTGGAAGATGGGCTTTACAGATCTGGGTTTCCTGATTCTTCCAATTTCGGCTTTCTCGAAACCCTAAATCTCAAGTCTATCATATATTTGTGCACTGAGCCATACCCAGAAGAGCATTTGAAGTTTCTTGAATCACATAATATTCGATTGTTCCAATTTGGAATTGAGGGGACTAAGGAGACAATCCCTGAGGATGTCATCTATGAAGCTCTTAGGATTTTGATAGATGTAAGAAACTACCCAATTCTGATTCACTGCAAACGTGGAAAGCATCGAACCGGTTGCCTCGTTGGTTGTCTTAGGAAGTTGCAGAACTGGTGTTTGGCATCAGTTTACGAGGAATACCAGCGTTTCGCAGGTGCTAAAGCTAGGGCAAATGACATGAAGTTTATGGAGAGATACGATGTTTTGCGCATTAGACAGTCTCTTTACAGTCTCATCTACCAATACCATGGTTATGGTTCGAACAAGAGGCGGTTGCTCGACAGAGAAGACAACTTGGCGAAACCCCGGATCAAATCAAGCTAA MAYFQYRMSVILWEKQQKKEKKKKEEEGGKHGGERKEEDDVLIPPTNFSMVEDGLYRSGFPDSSNFGFLETLNLKSIIYLCTEPYPEEHLKFLESHNIRLFQFGIEGTKETIPEDVIYEALRILIDVRNYPILIHCKRGKHRTGCLVGCLRKLQNWCLASVYEEYQRFAGAKARANDMKFMERYDVLRIRQSLYSLIYQYHGYGSNKRRLLDREDNLAKPRIKSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25102.1 vs. NCBI nr
Match: gi|902230385|gb|KNA21852.1| (hypothetical protein SOVF_039610 [Spinacia oleracea]) HSP 1 Score: 446.8 bits (1148), Expect = 2.200e-122 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo25102.1 vs. NCBI nr
Match: gi|731326265|ref|XP_010673932.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 381.3 bits (978), Expect = 1.100e-102 Identity = 191/226 (84.51%), Postives = 208/226 (92.04%), Query Frame = 1
BLAST of Spo25102.1 vs. NCBI nr
Match: gi|731326263|ref|XP_010673931.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 377.1 bits (967), Expect = 2.200e-101 Identity = 188/220 (85.45%), Postives = 204/220 (92.73%), Query Frame = 1
BLAST of Spo25102.1 vs. NCBI nr
Match: gi|731326267|ref|XP_010673933.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 375.6 bits (963), Expect = 6.300e-101 Identity = 187/219 (85.39%), Postives = 203/219 (92.69%), Query Frame = 1
BLAST of Spo25102.1 vs. NCBI nr
Match: gi|731344378|ref|XP_010683382.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 317.8 bits (813), Expect = 1.600e-83 Identity = 151/205 (73.66%), Postives = 173/205 (84.39%), Query Frame = 1
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSQ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039610 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 1.500e-122 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CMK5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g075230 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.400e-101 Identity = 187/219 (85.39%), Postives = 203/219 (92.69%), Query Frame = 1
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Match: W9SEZ2_9ROSA (Putative tyrosine-protein phosphatase OS=Morus notabilis GN=L484_015128 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 9.800e-77 Identity = 137/192 (71.35%), Postives = 165/192 (85.94%), Query Frame = 1
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Match: A0A067K3N3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18023 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.200e-76 Identity = 133/192 (69.27%), Postives = 162/192 (84.38%), Query Frame = 1
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Match: B9RM86_RICCO (Tyrosine-protein phosphatase SIW14, putative OS=Ricinus communis GN=RCOM_1078560 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.400e-75 Identity = 131/189 (69.31%), Postives = 164/189 (86.77%), Query Frame = 1
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Match: Y1500_ARATH (Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.700e-59 Identity = 102/148 (68.92%), Postives = 126/148 (85.14%), Query Frame = 1
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Match: SIW14_YEAST (Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIW14 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.300e-41 Identity = 81/148 (54.73%), Postives = 104/148 (70.27%), Query Frame = 1
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Match: D1060_DICDI (Probable tyrosine-protein phosphatase DG1060 OS=Dictyostelium discoideum GN=DG1060 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.300e-33 Identity = 67/146 (45.89%), Postives = 96/146 (65.75%), Query Frame = 1
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Match: OCA1_USTMA (Putative tyrosine-protein phosphatase OCA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=OCA1 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.100e-31 Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 1
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Match: OCA1_YARLI (Putative tyrosine-protein phosphatase OCA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=OCA1 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.200e-29 Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 1
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Match: AT5G16480.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 269.2 bits (687), Expect = 2.200e-72 Identity = 123/189 (65.08%), Postives = 157/189 (83.07%), Query Frame = 1
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Match: AT3G02800.1 (Tyrosine phosphatase family protein) HSP 1 Score: 267.3 bits (682), Expect = 8.500e-72 Identity = 119/185 (64.32%), Postives = 153/185 (82.70%), Query Frame = 1
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Match: AT4G03960.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 206.5 bits (524), Expect = 1.800e-53 Identity = 89/162 (54.94%), Postives = 128/162 (79.01%), Query Frame = 1
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Match: AT1G05000.2 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 169.1 bits (427), Expect = 3.100e-42 Identity = 88/180 (48.89%), Postives = 111/180 (61.67%), Query Frame = 1
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Match: AT2G32960.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 159.1 bits (401), Expect = 3.300e-39 Identity = 83/188 (44.15%), Postives = 113/188 (60.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25102.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25102.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25102.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25102.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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