Spo25205 (gene) | SpinachBase

Overview


Name	Spo25205
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial inner membrane protease ATP23
Location	SpoScf_01397 : 104508 .. 106023 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCTGTGAACAGGGTAAGGGGTATGGCTTCAGCTTTGCTGTTTGGGATCGGGAGTTGTGGCATTGGGTGGGGTGGAACGACAAGGTCAGTGTTTGGAGATTTTACTTGTTGGGCTTAAATGGAGTTGGGAGGTAGGATAGACTTGATCAACTAAATAGATCTTAATCAGTTCTCGAGTCTCCTATTGGTTAGGTGGTTCAAGAGATTTTTTCTTGTTCTTGGTGATTTGTTGAAAGGTAGAGAATTAATTTAGCTCATAATGTAGCTAGATTTCAGCCTTCTATGTTTGATTAGAGGATTTTGGCCGGCTTGATCATATGCCAGATCATCTAAATGAGTTGAGCTTCATACTTTAAGTCTTTAAGTACTTAACAATGCAATAATTCTCCCCTTGGTTGCTATGATTGTTAAAAAAAAATCGTAATAATCTTGAACAGTCAATCTCTTGAATAAGGGATTATTGTTTTTGTGTGATTGGCTGGGAGCAGTTGCAGTTGGGGGATGTTCAAAAACGTCTTTTAGTATCATAATGTAGCTAGATTTCAGCCTTCTATGTTTGATTAGAGGATTTTGGCTTGATCATATGCCAGATCATCTAAATGAGTGGAGCTTCATACTTTAAGTCTTTAAGTACTTAGCAATGCAATAATTCTCCCCGTGGTTGCTATGATTGACAAAAAAAAAATCTTAATAATCTTGAACAGTCAATCTCTTGAATAAGGGATTATTCTTTTCTTTTTCTTCACCAGTTATAATAGAATTTGCTGTTGACTTGGTGGGTTAAGACTTGTTTGTTTGATTGTTGGAGGTTTGGCTTGCAACAACAAAAACAAAACAAGGGCAATACAATAGTTTTGTGTAGAAAGAAGTAGAGATTTGATGCATATTTAAATGAACTATTGCAGGTGAAAACCTTAATGGAAGGGGAAACAGCTGATGTAAAAGGGACACCGAATAGCTCCCCGTCGGTTGTCCATGGTGATGGCGTAAGTGTAGAAGAGTGCCAAAAGATGATCCAGCGAAGCTTGCGAACTCCAACGGTGAAATTTCTGATGGGGCATTTGGAAAAATCTGGGTGTAGCATCGGCGATAACTTCATAAAAGCCGTTGATTGTAAGCAGCAAGTTAGCGGTGGTTATACTCGTGGTGGAGGGATAATGGTATGTAGCAATTACATGAACATGCAAGATGAAGTCAACCAAGTTCTGATCCATGAGCTTATTCATGCTTATGATGACTGTACTGGTAAAAACTTGAATTGGGCTAATTGTGCTCATCATGCTTGTAGTGAGATCCGCGCTGGTCATTTGAGTGGTGATTGTCACTTCAAACGAGAGCTATTGCGTGGTTATATGAAGCTTCGAGGCCACGAACAAGATTGTGTTAAAAGAAGAGTGATGAAATCGGTGATTGCTAATCCTTTTTGCTCTGAAACAGCTGCAAAAGATGCAATGGAAGCTGTTTGGGATACTTGTTACAATGATACACGACCCTTTGATAGAGCTCCTTGA

mRNA sequence

ATGTTGGCTGTGAACAGGGTGAAAACCTTAATGGAAGGGGAAACAGCTGATGTAAAAGGGACACCGAATAGCTCCCCGTCGGTTGTCCATGGTGATGGCGTAAGTGTAGAAGAGTGCCAAAAGATGATCCAGCGAAGCTTGCGAACTCCAACGGTGAAATTTCTGATGGGGCATTTGGAAAAATCTGGGTGTAGCATCGGCGATAACTTCATAAAAGCCGTTGATTGTAAGCAGCAAGTTAGCGGTGGTTATACTCGTGGTGGAGGGATAATGGTATGTAGCAATTACATGAACATGCAAGATGAAGTCAACCAAGTTCTGATCCATGAGCTTATTCATGCTTATGATGACTGTACTGGTAAAAACTTGAATTGGGCTAATTGTGCTCATCATGCTTGTAGTGAGATCCGCGCTGGTCATTTGAGTGGTGATTGTCACTTCAAACGAGAGCTATTGCGTGGTTATATGAAGCTTCGAGGCCACGAACAAGATTGTGTTAAAAGAAGAGTGATGAAATCGGTGATTGCTAATCCTTTTTGCTCTGAAACAGCTGCAAAAGATGCAATGGAAGCTGTTTGGGATACTTGTTACAATGATACACGACCCTTTGATAGAGCTCCTTGA

Coding sequence (CDS)

ATGTTGGCTGTGAACAGGGTGAAAACCTTAATGGAAGGGGAAACAGCTGATGTAAAAGGGACACCGAATAGCTCCCCGTCGGTTGTCCATGGTGATGGCGTAAGTGTAGAAGAGTGCCAAAAGATGATCCAGCGAAGCTTGCGAACTCCAACGGTGAAATTTCTGATGGGGCATTTGGAAAAATCTGGGTGTAGCATCGGCGATAACTTCATAAAAGCCGTTGATTGTAAGCAGCAAGTTAGCGGTGGTTATACTCGTGGTGGAGGGATAATGGTATGTAGCAATTACATGAACATGCAAGATGAAGTCAACCAAGTTCTGATCCATGAGCTTATTCATGCTTATGATGACTGTACTGGTAAAAACTTGAATTGGGCTAATTGTGCTCATCATGCTTGTAGTGAGATCCGCGCTGGTCATTTGAGTGGTGATTGTCACTTCAAACGAGAGCTATTGCGTGGTTATATGAAGCTTCGAGGCCACGAACAAGATTGTGTTAAAAGAAGAGTGATGAAATCGGTGATTGCTAATCCTTTTTGCTCTGAAACAGCTGCAAAAGATGCAATGGAAGCTGTTTGGGATACTTGTTACAATGATACACGACCCTTTGATAGAGCTCCTTGA

Protein sequence

MLAVNRVKTLMEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYNDTRPFDRAP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25205.1	Spo25205.1	mRNA

Homology

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BLAST of Spo25205.1 vs. NCBI nr
Match: gi|902209433|gb|KNA16213.1| (hypothetical protein SOVF_091170 [Spinacia oleracea])

HSP 1 Score: 416.0 bits (1068), Expect = 3.800e-113
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 1


		  
Query: 11  MEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 70
           MEGETADVKGTPNSS SVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF
Sbjct: 1   MEGETADVKGTPNSSLSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 60

Query: 71  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 130
           IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH
Sbjct: 61  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 120

Query: 131 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 190
           HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME
Sbjct: 121 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 180

Query: 191 AVWDTCYNDTRPFDRAP 208
           AVWDTCYNDTRPFDRAP
Sbjct: 181 AVWDTCYNDTRPFDRAP 197

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BLAST of Spo25205.1 vs. NCBI nr
Match: gi|731326299|ref|XP_010673948.1| (PREDICTED: mitochondrial inner membrane protease ATP23-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 355.5 bits (911), Expect = 6.200e-95
Identity = 164/197 (83.25%), Postives = 185/197 (93.91%), Query Frame = 1


		  
Query: 11  MEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 70
           MEG   D KG   +S  VV+GDGV+V++CQKMIQ+SLR+P VKFLM +LEKSGC+IGDNF
Sbjct: 1   MEGNGNDAKGATKTS--VVNGDGVTVKDCQKMIQKSLRSPMVKFLMENLEKSGCTIGDNF 60

Query: 71  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 130
           IKAV+C+Q+V+GGYTRGGGI+VCSN+MN+QDEV+QVLIHELIHAYDDCT KNLNWANCAH
Sbjct: 61  IKAVNCQQKVAGGYTRGGGIIVCSNHMNLQDEVDQVLIHELIHAYDDCTAKNLNWANCAH 120

Query: 131 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 190
           HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRV+KSV+ANP+C+ETAAKDAME
Sbjct: 121 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVIKSVMANPYCAETAAKDAME 180

Query: 191 AVWDTCYNDTRPFDRAP 208
           AVWDTCYNDTRPFDRAP
Sbjct: 181 AVWDTCYNDTRPFDRAP 195

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BLAST of Spo25205.1 vs. NCBI nr
Match: gi|731326222|ref|XP_010673910.1| (PREDICTED: mitochondrial inner membrane protease ATP23-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.100e-94
Identity = 163/197 (82.74%), Postives = 183/197 (92.89%), Query Frame = 1


		  
Query: 11  MEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 70
           MEG   D KG   +S  VV+GDGV+V++CQKMIQ+SLR+P VKFLM +LEK GC+IGDNF
Sbjct: 1   MEGNGNDAKGATKTS--VVNGDGVTVKDCQKMIQKSLRSPMVKFLMENLEKCGCTIGDNF 60

Query: 71  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 130
           IKAV+C+Q+V+GGYTRGGGI+VCSN+MN+QDEV+QVLIHELIHAYDDCT KNLNWANCAH
Sbjct: 61  IKAVNCQQKVAGGYTRGGGIIVCSNHMNLQDEVDQVLIHELIHAYDDCTAKNLNWANCAH 120

Query: 131 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 190
           HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRV+KSV+ NP+CSETAAKDAME
Sbjct: 121 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVVKSVMTNPYCSETAAKDAME 180

Query: 191 AVWDTCYNDTRPFDRAP 208
           AVWDTCYNDTRPFDRAP
Sbjct: 181 AVWDTCYNDTRPFDRAP 195

[Close]

BLAST of Spo25205.1 vs. NCBI nr
Match: gi|720068823|ref|XP_010277237.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Nelumbo nucifera])

HSP 1 Score: 320.5 bits (820), Expect = 2.200e-84
Identity = 144/187 (77.01%), Postives = 165/187 (88.24%), Query Frame = 1


		  
Query: 21  TPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQV 80
           T + S S     G +VEECQ MIQ+SLRTPTV+FL  H+EK+GC IGD FIKAV+C +Q+
Sbjct: 9   TASGSFSPYENGGRTVEECQDMIQKSLRTPTVRFLKEHIEKAGCMIGDKFIKAVNCDKQI 68

Query: 81  SGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRAGH 140
           SGGY RG GI+VCSN+MN+QDEVNQV+IHELIHAYDDC   NL+WANCAHHACSEIRAGH
Sbjct: 69  SGGYVRGEGILVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWANCAHHACSEIRAGH 128

Query: 141 LSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYNDT 200
           LSGDCH+KRELLRGYMK+RGHEQ+CVKRRVMKSV+ANP+CSE AA+DAMEAVWD CYNDT
Sbjct: 129 LSGDCHYKRELLRGYMKIRGHEQECVKRRVMKSVVANPYCSEAAARDAMEAVWDVCYNDT 188

Query: 201 RPFDRAP 208
           +PFDRAP
Sbjct: 189 KPFDRAP 195

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BLAST of Spo25205.1 vs. NCBI nr
Match: gi|694426323|ref|XP_009340846.1| (PREDICTED: mitochondrial inner membrane protease ATP23-like [Pyrus x bretschneideri])

HSP 1 Score: 320.5 bits (820), Expect = 2.200e-84
Identity = 146/197 (74.11%), Postives = 172/197 (87.31%), Query Frame = 1


		  
Query: 11  MEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 70
           ME E A   G+  S PS V+G G ++EECQ MIQRSLRTP VKFL+ HLE+SGC IGD F
Sbjct: 1   MEAEPAPEPGS-TSFPSAVNG-GKTLEECQTMIQRSLRTPVVKFLLKHLEQSGCGIGDRF 60

Query: 71  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 130
           IKA++C +Q++GGY RG GI+VC N+M MQD+VNQV+IHELIHA+DDC  KNL+W+NCAH
Sbjct: 61  IKAINCNKQIAGGYVRGEGILVCGNHMTMQDDVNQVVIHELIHAFDDCRAKNLDWSNCAH 120

Query: 131 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 190
           HACSEIRAGHLSGDCH+KRELLRG++K+RGHEQDCV+RRVMKSVI+NP+CSE AAKDAME
Sbjct: 121 HACSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVISNPYCSEAAAKDAME 180

Query: 191 AVWDTCYNDTRPFDRAP 208
           AVWD CYNDT+PFDRAP
Sbjct: 181 AVWDVCYNDTQPFDRAP 195

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BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9M4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091170 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 2.700e-113
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 1


		  
Query: 11  MEGETADVKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 70
           MEGETADVKGTPNSS SVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF
Sbjct: 1   MEGETADVKGTPNSSLSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNF 60

Query: 71  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 130
           IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH
Sbjct: 61  IKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAH 120

Query: 131 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 190
           HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME
Sbjct: 121 HACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAME 180

Query: 191 AVWDTCYNDTRPFDRAP 208
           AVWDTCYNDTRPFDRAP
Sbjct: 181 AVWDTCYNDTRPFDRAP 197

[Close]

BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Match: V4THM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016815mg PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.000e-84
Identity = 145/189 (76.72%), Postives = 165/189 (87.30%), Query Frame = 1


		  
Query: 19  KGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQ 78
           K  P SS S V+G G ++EECQ MIQRSLR PTVKFL  HLEK+GC  GD FIKAV C +
Sbjct: 8   KSIPESSSSAVNG-GRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIKAVHCNK 67

Query: 79  QVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRA 138
           +++GGY RG GI+VCSN+MN+QDEVNQV+IHELIHAYD+C   NL+W+NCAHHACSEIRA
Sbjct: 68  KIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRA 127

Query: 139 GHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYN 198
           GHLSGDCH+KRELLRGYMK+RGHEQDCV+RRVMKSVIANP+CS  AAKDAMEAVWD CYN
Sbjct: 128 GHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYN 187

Query: 199 DTRPFDRAP 208
           DT+PFDRAP
Sbjct: 188 DTQPFDRAP 195

[Close]

BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Match: A0A067E9V3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029293mg PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.600e-84
Identity = 145/189 (76.72%), Postives = 165/189 (87.30%), Query Frame = 1


		  
Query: 19  KGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQ 78
           K  P SS S V+G G ++EECQ MIQRSLR PTVKFL  HLEK+GC  GD FIKAV C +
Sbjct: 8   KSIPESSSSAVNG-GRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIKAVHCDK 67

Query: 79  QVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRA 138
           +++GGY RG GI+VCSN+MN+QDEVNQV+IHELIHAYD+C   NL+W+NCAHHACSEIRA
Sbjct: 68  KIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRA 127

Query: 139 GHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYN 198
           GHLSGDCH+KRELLRGYMK+RGHEQDCV+RRVMKSVIANP+CS  AAKDAMEAVWD CYN
Sbjct: 128 GHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYN 187

Query: 199 DTRPFDRAP 208
           DT+PFDRAP
Sbjct: 188 DTQPFDRAP 195

[Close]

BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Match: B9SLT5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0531760 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.700e-83
Identity = 142/190 (74.74%), Postives = 167/190 (87.89%), Query Frame = 1


		  
Query: 18  VKGTPNSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCK 77
           ++G P ++P      G ++EECQ MI++SLRTP VKFL  HLEK+GC IGDNFIKAV+C+
Sbjct: 1   MEGEPTNTPG---SGGRTIEECQDMIRKSLRTPMVKFLREHLEKAGCGIGDNFIKAVNCE 60

Query: 78  QQVSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIR 137
           +++SGGY  G GI+VCSN+MNMQDEVNQV+IHELIHAYDDC   NL+WANC HHACSEIR
Sbjct: 61  KKMSGGYVSGDGIVVCSNHMNMQDEVNQVVIHELIHAYDDCRAANLDWANCVHHACSEIR 120

Query: 138 AGHLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCY 197
           AGHLSGDCH+KRELLRGYMK+RGHEQ+CV+RRVMKS+IANP+CSE AAKDAMEAVWD CY
Sbjct: 121 AGHLSGDCHYKRELLRGYMKIRGHEQECVRRRVMKSMIANPYCSEAAAKDAMEAVWDVCY 180

Query: 198 NDTRPFDRAP 208
           NDT+PFDRAP
Sbjct: 181 NDTKPFDRAP 187

[Close]

BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KSC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.400e-83
Identity = 144/185 (77.84%), Postives = 164/185 (88.65%), Query Frame = 1


		  
Query: 23  NSSPSVVHGDGVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQVSG 82
           N S S V+G G + EEC+ MI+RSLRTP VKFLM HLEKSGC IGD FIKAV C++Q+SG
Sbjct: 12  NRSYSSVNG-GRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISG 71

Query: 83  GYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRAGHLS 142
           GY RG GIMVCSN+MN+QDEVNQV+IHELIHA+DDC   NL+WANC HHACSEIRAGHLS
Sbjct: 72  GYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLS 131

Query: 143 GDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYNDTRP 202
           GDCH+KRELLRG+MKLRGHEQ+CV+RRVMKS++ANP+C E AAKDAMEAVWD CYNDT+P
Sbjct: 132 GDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQP 191

Query: 203 FDRAP 208
           FDRAP
Sbjct: 192 FDRAP 195

[Close]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Match: ATP23_CRYNJ (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.100e-34
Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 1


		  
Query: 49  TPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLI 108
           +P + FL+ HL+ +GC    + ++   C +  +GG++   GI++C +    +  +   L 
Sbjct: 69  SPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQDRFFNKKHMEDTLA 128

Query: 109 HELIHAYDDCTGKNLNWANCAHHACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKR 168
           HEL+HA+D C  K ++W N  HHACSEIRA +LSGDC F RE+ RG+       Q CVKR
Sbjct: 129 HELVHAFDHCRFK-VDWGNLRHHACSEIRAANLSGDCRFTREVKRGFYAFNKQHQACVKR 188

Query: 169 RVMKSVIANPFC-SETAAKDAMEAVWDTCYNDTRPFD 205
           R + SV+ANP C S   A+ A+  VW++C+ DTRPFD
Sbjct: 189 RAILSVLANPACTSPEMAEKAVNEVWESCFTDTRPFD 224

[Close]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Match: ATP23_CRYNB (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.700e-34
Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 1


		  
Query: 49  TPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLI 108
           +P + FL+ HL+ +GC    + ++   C +  +GG++   GI++C +    +  +   L 
Sbjct: 69  SPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQDRFFNKKHMEDTLA 128

Query: 109 HELIHAYDDCTGKNLNWANCAHHACSEIRAGHLSGDCHFKRELLRGYMKLRGHEQDCVKR 168
           HEL+HA+D C  K ++W N  HHACSEIRA +LSGDC F RE+ RG+       Q CVKR
Sbjct: 129 HELVHAFDHCRFK-VDWGNLRHHACSEIRAANLSGDCRFTREVKRGFYAFNKQHQACVKR 188

Query: 169 RVMKSVIANPFC-SETAAKDAMEAVWDTCYNDTRPFD 205
           R + SV+ANP C S   A+ A+  VW++C+ DTRPFD
Sbjct: 189 RAILSVLANPACTSPEMAERAVNEVWESCFTDTRPFD 224

[Close]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.300e-32
Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 1


		  
Query: 49  TPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQVSGGYTRGGGIMVCSNYMNMQDEVNQVLI 108
           +PTV+F+   +EK G  I  N +    C    +GG+    GI+VC N++  +  +   L 
Sbjct: 90  SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLA 149

Query: 109 HELIHAYDDCTGKNLNWANCAHHACSEIRAGHLSGDCHFKRELLRGYMK--LRGHEQDCV 168
           HE++H YD+   K ++W N  HHACSEIRA  LSG+C    EL++G +    RGH Q+C 
Sbjct: 150 HEMVHYYDNTKFK-VDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGH-QECA 209

Query: 169 KRRVMKSVIANPFCSETA-AKDAMEAVWDTCYNDTRPFD 205
           KRR + SV+ANP C + A A   +  VWD+C+NDTRPFD
Sbjct: 210 KRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246

[Close]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Match: ATP23_DANRE (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=atp23 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.400e-30
Identity = 70/173 (40.46%), Postives = 104/173 (60.12%), Query Frame = 1


		  
Query: 38  ECQKMIQRSLRT-PTVKFLMGHLEKSGCSI-GDNFIKAVDCKQQVSGGYTRGGG-IMVCS 97
           +CQ M+Q ++ T P  K L+G ++ SGC++  D      DC   VSGG+      I++C 
Sbjct: 59  KCQLMLQFAMDTSPYAKLLLGAMKSSGCTVFKDRHFSCEDCDGTVSGGFDAATSQIVLCQ 118

Query: 98  NYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRAGHLSGDCHFKRELLRG 157
           N ++ Q  +N+V+ HELIHA+D C  +   ++N  H ACSEIRA +LSGDC F  E  R 
Sbjct: 119 NNIHQQAHMNRVVTHELIHAFDHCRAQVDWFSNYRHLACSEIRAANLSGDCSFINEFSRF 178

Query: 158 YMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYNDTRPFDRAP 208
              LR H Q+CV+ R ++S++A    S   A+  ++ V+D+C+ND  PF R P
Sbjct: 179 NFGLRKHHQECVRGRALRSILAVRRVSREEAERVVDEVFDSCFNDHAPFGRIP 231

[Close]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.900e-30
Identity = 69/174 (39.66%), Postives = 106/174 (60.92%), Query Frame = 1


		  
Query: 38  ECQKMIQRSLRT-PTVKFLMGHLEKSGCSI-GDNFIKAVDCKQQVSGGYTRGGG-IMVCS 97
           +CQ M++ +L T P  K L+  +++SGC++  D      +C   VSGG+      I++C 
Sbjct: 40  KCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQ 99

Query: 98  NYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHH-ACSEIRAGHLSGDCHFKRELLR 157
           N ++ Q  +N+V+ HELIHA+D C   +++W N   H ACSEIRA +LSGDC    EL R
Sbjct: 100 NNIHQQSHMNRVVTHELIHAFDHCRA-HVDWFNNVRHLACSEIRAANLSGDCTLANELTR 159

Query: 158 GYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYNDTRPFDRAP 208
               ++GH Q CV+ R ++S++A    S   A+ A++ V+D+C+ND  PF R P
Sbjct: 160 FKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIP 212

[Close]

BLAST of Spo25205.1 vs. TAIR (Arabidopsis)
Match: AT3G03420.1 (Ku70-binding family protein)

HSP 1 Score: 302.8 bits (774), Expect = 1.700e-82
Identity = 137/188 (72.87%), Postives = 158/188 (84.04%), Query Frame = 1


		  
Query: 22  PNSSPSVVHGD--GVSVEECQKMIQRSLRTPTVKFLMGHLEKSGCSIGDNFIKAVDCKQQ 81
           PNS      G   G S++ECQ MI+RS R P VKFLM  +EKSGC +GDNF+KAV C   
Sbjct: 7   PNSGSEFNPGARRGKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVKAVVCTGP 66

Query: 82  VSGGYTRGGGIMVCSNYMNMQDEVNQVLIHELIHAYDDCTGKNLNWANCAHHACSEIRAG 141
           V+GGYT+G GI VCSNY+ +QDEVNQV+IHELIHAYD+C  KNL+W NCAHHACSEIRAG
Sbjct: 67  VAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHACSEIRAG 126

Query: 142 HLSGDCHFKRELLRGYMKLRGHEQDCVKRRVMKSVIANPFCSETAAKDAMEAVWDTCYND 201
           HLSGDCHFKRELLRG++KLRGHEQ+C+KRRV+KS+  NP+CSE AAKDAMEAVWDTCYND
Sbjct: 127 HLSGDCHFKRELLRGFIKLRGHEQECIKRRVLKSLRGNPYCSEVAAKDAMEAVWDTCYND 186

Query: 202 TRPFDRAP 208
           T+PFDRAP
Sbjct: 187 TKPFDRAP 194

The following BLAST results are available for this feature:

BLAST of Spo25205.1 vs. NCBI nr
BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
BLAST of Spo25205.1 vs. TAIR (Arabidopsis)

BLAST of Spo25205.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902209433\|gb\|KNA16213.1\|	3.8e-113	99.4	hypothetical protein SOVF_0911...	[more]
gi\|731326299\|ref\|XP_010673948.1\|	6.2e-95	83.2	PREDICTED: mitochondrial inner...	[more]
gi\|731326222\|ref\|XP_010673910.1\|	3.1e-94	82.7	PREDICTED: mitochondrial inner...	[more]
gi\|720068823\|ref\|XP_010277237.1\|	2.2e-84	77.0	PREDICTED: mitochondrial inner...	[more]
gi\|694426323\|ref\|XP_009340846.1\|	2.2e-84	74.1	PREDICTED: mitochondrial inner...	[more]

BLAST of Spo25205.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R9M4_SPIOL	2.7e-113	99.4	Uncharacterized protein OS=Spi...	[more]
V4THM4_9ROSI	2.0e-84	76.7	Uncharacterized protein OS=Cit...	[more]
A0A067E9V3_CITSI	2.6e-84	76.7	Uncharacterized protein OS=Cit...	[more]
B9SLT5_RICCO	1.7e-83	74.7	Putative uncharacterized prote...	[more]
A0A0A0KSC7_CUCSA	8.4e-83	77.8	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo25205.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATP23_CRYNJ	2.1e-34	42.6	Mitochondrial inner membrane p...	[more]
ATP23_CRYNB	2.7e-34	42.6	Mitochondrial inner membrane p...	[more]
ATP23_YARLI	3.3e-32	43.4	Mitochondrial inner membrane p...	[more]
ATP23_DANRE	1.4e-30	40.4	Mitochondrial inner membrane p...	[more]
ATP23_XENLA	6.9e-30	39.6	Mitochondrial inner membrane p...	[more]

BLAST of Spo25205.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G03420.1	1.7e-82	72.8	Ku70-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019165	Peptidase M76, ATP23	PFAM	PF09768	Peptidase_M76	coord: 37..204 score: 4.6
None	No IPR available	PANTHER	PTHR21711	KUB3-PROV PROTEIN	coord: 31..207 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0016020	membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046982	protein heterodimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16627	0.70	Barchart \| Table
Spo25289	0.69	Barchart \| Table
Spo18103	0.68	Barchart \| Table
Spo08589	0.68	Barchart \| Table
Spo06802	0.67	Barchart \| Table
Spo12394	0.67	Barchart \| Table
Spo25851	0.66	Barchart \| Table
Spo06681	0.66	Barchart \| Table
Spo24414	0.65	Barchart \| Table
Spo17110	0.65	Barchart \| Table
Spo00071	0.65	Barchart \| Table