Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTATAAACAAACAAGGGATAAGAGTATAAAAGGATAAAATATCCTTATCCCCACCCCATATCCTGGTACGAGCCGATAGATTCTTCCTCACCAGTCACCACATATCTTTCTCTCTCCTCTTAATCAATTCTTTCAATTTTTGCAAGACTTCTTCTGCCTCCACTTTCTTCTACCATGCTTCGATCCTCTTTCTTCTTCTATCAGATCATTCGTTTGAATTTTAGGTTTTTTTTCCATTTATGGCGAGAATGAAGAAATTGCCATCGGAAGACAACAAAAGGGAGGAAAGGGTTTATTTTATATCCTCTCTAATATTTCTCCTTTCTTTTAAATAAATGGCGTCCAGATCTAGCAGTTCTCCCTCGGCTTCCAACAGGAGTATTGGCTTAGAGGCGTTAGGAAGTGCAGGAGCACAAAAAAATAGTTCTAACTTCGATTTTCATGATTTTTAGGTAATAATTTGCGATTACCTTAATCAAGATGCCAAAGATTTAGGTTTCTAAGGGGAGTATTGATTGGACGCATGAAGAGATAGCCCCATGAAAAACCATCAAGATTTCAAATTTTCAATGGCGTATATATTGGCCCGGAGGCATTAGGAAGTTCAGGTATTTCGTGTTTGTCTAAACCAAATATTTTGGTTGGAATTGGAATTTTGTGTTTTGGAATTGGAATTGGAATTTCGTGTTTGTCTAATCGTTTTGTGTTAAGGATGAATTAGGAAGGTAGCAATATATTTTGGTTTCAAAATAGAAAAATGAAGGATGGTATTAACTATTTTGAAATCTTATTGTGATTTAACTTTTCAATCTGGGTTTCCCTGGTTTTAAACTTTGTCTCTGTGGCTATCATGGTTCTGTTTTCAGGATTACCTACACTGTTGAATCGCATCATCTTAAAGTTTGACACACACATGTCACTTTCTTTTTACATTGTATTTCCCGAGGATTGCTAAACCTCAAGTGGCTCAAATACAATTATTTTTAGTACCGACACAGCATATGTCAGTACCAATAACACAAATAATTTGTATTGGTACTTCTTAACTAGTCTTAGTACCAATGTCAAATTAGCGGGTACTAATTACAAGCCACTTGTGTCCATATGGACACAAGTCACTTGAGGCCAAGACTTCCTCGTATTTCCTTATCTTTAGTTTTAAGGAATGTGTTTCTGGGCTATTATTAACAGTCTAACTATTCATTGTAATATAGCCCTTTGGTATCCACAATGAAGGAGTAAGTCAATGAGTAGTGAATTGTTGACTCCATTTGAAATGGACAATACTCATCCAGGTCATACCTCTCTTAAATTCTGCCTAGAAAACTTTGCCTGATATTTTTATATGTGATTATTTTACAAGTCAAGGATAGAAACATGTCTCTAAAGCTTGTCTGTTTTTGGTGGCAACTGTGTCTCGAGACTTAAAGTGTAGGTTTCGGGTGTTGGATGGTGTCAACTGTTACTCTTATGGAAATGCTGACATCTTGGAAATCTACTAGATCATCATATGAAAATTGTAGTTATAGTGTGAAATGGCAAGTTATTGCCATGTTATGTAGATTTTAATATGTGCTAGCTTAAAATGTGTTACTGGTGATCTGCGAAGCATATGCTTATCTATGTAATCCTTTGTCGAGCAAAAAAAGACACTCCACAATTGGTCGACCTTGTAGCACTATTCCTTGATAATCCCATAGGAGCAAGTCAAAGACTCGCATACTTGCTTGTAATCATGCATGAACATGGCAAAAAATAGTCACATATGTTGTGTAAAGATTTTGTTCGTGATGCAACTTCCTTGCTTGATATCATTGTCTTCTCACCCTTATTGTGCTTAAACTGATGTTCTTGTCCTGTCAGAGTGCTAGACAATTCGTCGCATAGTCTTCAGTTAAGTACTCCTAGATATCATGTTCATAGTAAATTGATGAAAATTATGGATGTTATAATTAGTTGAAAATGCACCCAATTGGAAGTAAGCTCCTGCTGATTTGGTTGATTTGTTGAGATTATCTAAAACAATTTTTTTACCAATCAACCAAATCATCAAATTTCTACGCACCGATTATTGGCTAAAACTAACGAACACCAAAGTTAGTTTTAACAAGAAATACGCATGCTCTTGATTTACTCTCTCCGTTAAAATCATTCAAAAACCCTAAATTTTGACCGGCTTCGAGCAATTTCTTATGATCTTCGACATATGGTATGGATTACAAAATTTTAGCTTATTTTTGCAGAATTATTTGTTTTCAGTCGCTGGTGCTTTATTACTCCTCAATTATTAATTTGAATTATAATGCTAGATTTCTGAAAAATGGAGATGGAGACGATCTTGAAGATTTGGATGGGAAGGTTTCTTAGCTTAAAAACGAGGTGGGTTTTTTTAATTAGCTCTGTATTTTACTTACATAATATCCTTAATTTTTCATAAACCTTGAGATTTTTTTCTCATGTGAGTTTTCTCTATTTTTAAATCAATTTTGTGTGTTCGTTGACATGGAATGTTTGATGGATGGGATATGAAGGATTTTTGGCTTATGATAATTTGATACGGAGTATATCATTTCAGTTTTGAAAGATTTGTGTTCCATGAAGTTATTTTACACATTTACATGTGGCGAGGTAATTCTTTCCCCCTCTCCTCTATGCGCTATGGAATGCTGGGTTACGTCCTCCTGCCCTAAGTCGATCCTAAAAAAGTGTCTTCGATCTGGATTCAGAGGCTCCATCTAAGTATAGAGAAAGAAGAAATGAATCGAAAGGTTTCTTCTCCATCCAGTTCTTTATGGTTGATGGAAAGATGATTCAGCTGAGTTGTTTCCTTTGTCACCTAAACAATAAATTCTGCTCATGTTGATGATATTTTACAAATAGTAACGATGTGTCTTGCTTTTATGCATTAAGATGTGTTTTCCTCTGCTTTCAGGCTAAACTGCCAACGTCAGAGATAGCATCCGCGATCAATGAATTTAGATCCCGTCACCTCTCTGAGTTGACTGAGGTATGTTTATGAGGCTGTTTCATAACTCTTAGATGATGCGTTTCTACTCATGTATGAATAGGATTTTAAGACACTTGAGTTGTGTGTTATTGCAGCTGTGTGAAGCTAGTGGAAGTTCTCTAGGTTATGGATATTCTCGTGTCATGACCAAACCCAAGTCTCAACCGCTGGATCCATCAGATGATAACCCAATTATTGACGGAACACTGGCAATATGAGTATGCATCAGTTAGCGAAGAAGACAACAGAAAAAACTGTATAGGTTGATTACAGTCTCGTTAGGTTAATTTGTATAGAAAATTTTGGCAATAATATTCAATATACTCGTACCTCCTTTGATTCATTGTTCAAAAAAATTCATCGTTGATCAATGATGACAAATATTCATGTTCATTTTCTGAAAGGAATCCAAAATTTTGGCTGTTCTTTTTTCTAATCGTAAACAG TCCTTATAAACAAACAAGGGATAAGAGTATAAAAGGATAAAATATCCTTATCCCCACCCCATATCCTGGTACGAGCCGATAGATTCTTCCTCACCAGTCACCACATATCTTTCTCTCTCCTCTTAATCAATTCTTTCAATTTTTGCAAGACTTCTTCTGCCTCCACTTTCTTCTACCATGCTTCGATCCTCTTTCTTCTTCTATCAGATCATTCGTTTGAATTTTAGGTTTTTTTTCCATTTATGGCGAGAATGAAGAAATTGCCATCGGAAGACAACAAAAGGGAGGAAAGGGTTTATTTTATATCCTCTCTAATATTTCTCCTTTCTTTTAAATAAATGGCGTCCAGATCTAGCAGTTCTCCCTCGGCTTCCAACAGGAGTATTGGCTTAGAGGCGTTAGGAAGTGCAGGAGCACAAAAAAATAGTTCTAACTTCGATTTTCATGATTTTTAGGTAATAATTTGCGATTACCTTAATCAAGATGCCAAAGATTTAGGTTTCTAAGGGGAGTATTGATTGGACGCATGAAGAGATAGCCCCATGAAAAACCATCAAGATTTCAAATTTTCAATGGCGTATATATTGGCCCGGAGGCATTAGGAAGTTCAGATTTCTGAAAAATGGAGATGGAGACGATCTTGAAGATTTGGATGGGAAGGTTTCTTAGCTTAAAAACGAGGATTTTTGGCTTATGATAATTTGATACGGAGTATATCATTTCAGTTTTGAAAGATTTGTGTTCCATGAAGTTATTTTACACATTTACATGTGGCGAGGTAATTCTTTCCCCCTCTCCTCTATGCGCTATGGAATGCTGGGTTACGTCCTCCTGCCCTAAGTCGATCCTAAAAAAGTGTCTTCGATCTGGATTCAGAGGCTCCATCTAAGTATAGAGAAAGAAGAAATGAATCGAAAGGCTAAACTGCCAACGTCAGAGATAGCATCCGCGATCAATGAATTTAGATCCCGTCACCTCTCTGAGTTGACTGAGCTGTGTGAAGCTAGTGGAAGTTCTCTAGGTTATGGATATTCTCGTGTCATGACCAAACCCAAGTCTCAACCGCTGGATCCATCAGATGATAACCCAATTATTGACGGAACACTGGCAATATGAGTATGCATCAGTTAGCGAAGAAGACAACAGAAAAAACTGTATAGGTTGATTACAGTCTCGTTAGGTTAATTTGTATAGAAAATTTTGGCAATAATATTCAATATACTCGTACCTCCTTTGATTCATTGTTCAAAAAAATTCATCGTTGATCAATGATGACAAATATTCATGTTCATTTTCTGAAAGGAATCCAAAATTTTGGCTGTTCTTTTTTCTAATCGTAAACAG ATGAATCGAAAGGCTAAACTGCCAACGTCAGAGATAGCATCCGCGATCAATGAATTTAGATCCCGTCACCTCTCTGAGTTGACTGAGCTGTGTGAAGCTAGTGGAAGTTCTCTAGGTTATGGATATTCTCGTGTCATGACCAAACCCAAGTCTCAACCGCTGGATCCATCAGATGATAACCCAATTATTGACGGAACACTGGCAATATGA MNRKAKLPTSEIASAINEFRSRHLSELTELCEASGSSLGYGYSRVMTKPKSQPLDPSDDNPIIDGTLAI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25243.1 vs. NCBI nr
Match: gi|902204957|gb|KNA15026.1| (hypothetical protein SOVF_101830 [Spinacia oleracea]) HSP 1 Score: 131.7 bits (330), Expect = 4.800e-28 Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of Spo25243.1 vs. NCBI nr
Match: gi|1021048298|gb|KZN06078.1| (hypothetical protein DCAR_006915 [Daucus carota subsp. sativus]) HSP 1 Score: 109.0 bits (271), Expect = 3.400e-21 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
BLAST of Spo25243.1 vs. NCBI nr
Match: gi|1021049984|gb|KZN07764.1| (hypothetical protein DCAR_008601 [Daucus carota subsp. sativus]) HSP 1 Score: 109.0 bits (271), Expect = 3.400e-21 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
BLAST of Spo25243.1 vs. NCBI nr
Match: gi|747045002|ref|XP_011091911.1| (PREDICTED: K(+) efflux antiporter 2, chloroplastic [Sesamum indicum]) HSP 1 Score: 108.2 bits (269), Expect = 5.700e-21 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 1
BLAST of Spo25243.1 vs. NCBI nr
Match: gi|743828882|ref|XP_011023374.1| (PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Populus euphratica]) HSP 1 Score: 107.5 bits (267), Expect = 9.800e-21 Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R694_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101830 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.400e-28 Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Match: A0A166FGN5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008601 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 2.300e-21 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Match: A0A166E4F9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_006915 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 2.300e-21 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Match: B9ICA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07660g PE=4 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 2.600e-20 Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Match: B9GPY6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15860g PE=4 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 3.400e-20 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1
BLAST of Spo25243.1 vs. ExPASy Swiss-Prot
Match: KEA2_ARATH (K(+) efflux antiporter 2, chloroplastic OS=Arabidopsis thaliana GN=KEA2 PE=1 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 1.700e-20 Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of Spo25243.1 vs. ExPASy Swiss-Prot
Match: KEA1_ARATH (K(+) efflux antiporter 1, chloroplastic OS=Arabidopsis thaliana GN=KEA1 PE=1 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 1.400e-19 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 1
BLAST of Spo25243.1 vs. TAIR (Arabidopsis)
Match: AT4G00630.2 (K+ efflux antiporter 2) HSP 1 Score: 99.4 bits (246), Expect = 9.400e-22 Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of Spo25243.1 vs. TAIR (Arabidopsis)
Match: AT1G01790.1 (K+ efflux antiporter 1) HSP 1 Score: 96.3 bits (238), Expect = 7.900e-21 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25243.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo25243.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo25243.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2 Position : 0 Zoom : x 1
BLAST of Spo25243.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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