Spo25267 (gene)

Overview
NameSpo25267
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 7842259 .. 7842735 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTATTTAACATCAAGTCATCCACAATTGTTAATCACTATCAACATCATTAGTGACGGAACCATTGCCACGTTTAGGCTCTCTTCAACACATTCATCCGTCACTAAAAAGATCCAAAATCCGTTTATCCGACCCTGCTTACTTTGCAAACTCATTATCCCGGGTTCGAATCTCGTACTTTACCATTTTCCTGTTCCACACTTCCACAGTTCCACCTACTCTCTCATTCGGCCTTTTCTCTTTTTATTTTTTTCATTTTCCTTTTTTTCAACGTTCTCTGACTTCTCTCCGCCAAATTGGGGATTATTTAACGGTGGAACCCTAATAATAAACAAAATCACTCGGAACCAATCCATTTCCCGCAGGACGACTTCTCTCCACATCCTTTCTCCACCGCCGTGGGCTCCACCTTTCTTCTCTCCGGCGACTACATTCACCCGTCTCTCCGCCCTAAACACCGCCGCCACCAAGTAA

mRNA sequence

ATGGAGTATTTAACATCAAGTCATCCACAATTGTTAATCACTATCAACATCATTAGTGACGGAACCATTGCCACGTTTAGGCTCTCTTCAACACATTCATCCGTCACTAAAAAGATCCAAAATCCGTTTATCCGACCCTGCTTACTTTGCAAACTCATTATCCCGGGTTCGAATCTCGTACTTTACCATTTTCCTGTTCCACACTTCCACAGTTCCACCTACTCTCTCATTCGGCCTTTTCTCTTTTTATTTTTTTCATTTTCCTTTTTTTCAACGTTCTCTGACTTCTCTCCGCCAAATTGGGGATTATTTAACGGTGGAACCCTAATAATAAACAAAATCACTCGGAACCAATCCATTTCCCGCAGGACGACTTCTCTCCACATCCTTTCTCCACCGCCGTGGGCTCCACCTTTCTTCTCTCCGGCGACTACATTCACCCGTCTCTCCGCCCTAAACACCGCCGCCACCAAGTAA

Coding sequence (CDS)

ATGGAGTATTTAACATCAAGTCATCCACAATTGTTAATCACTATCAACATCATTAGTGACGGAACCATTGCCACGTTTAGGCTCTCTTCAACACATTCATCCGTCACTAAAAAGATCCAAAATCCGTTTATCCGACCCTGCTTACTTTGCAAACTCATTATCCCGGGTTCGAATCTCGTACTTTACCATTTTCCTGTTCCACACTTCCACAGTTCCACCTACTCTCTCATTCGGCCTTTTCTCTTTTTATTTTTTTCATTTTCCTTTTTTTCAACGTTCTCTGACTTCTCTCCGCCAAATTGGGGATTATTTAACGGTGGAACCCTAATAATAAACAAAATCACTCGGAACCAATCCATTTCCCGCAGGACGACTTCTCTCCACATCCTTTCTCCACCGCCGTGGGCTCCACCTTTCTTCTCTCCGGCGACTACATTCACCCGTCTCTCCGCCCTAAACACCGCCGCCACCAAGTAA

Protein sequence

MEYLTSSHPQLLITINIISDGTIATFRLSSTHSSVTKKIQNPFIRPCLLCKLIIPGSNLVLYHFPVPHFHSSTYSLIRPFLFLFFSFSFFSTFSDFSPPNWGLFNGGTLIINKITRNQSISRRTTSLHILSPPPWAPPFFSPATTFTRLSALNTAATK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25267.1Spo25267.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo25267.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25267.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25267.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25267.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0055085 transmembrane transport
biological_process GO:0042742 defense response to bacterium
biological_process GO:0031347 regulation of defense response
biological_process GO:0010468 regulation of gene expression
biological_process GO:0032880 regulation of protein localization
biological_process GO:0000302 response to reactive oxygen species
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006508 proteolysis
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0048653 anther development
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0009735 response to cytokinin
cellular_component GO:0009579 thylakoid
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0000311 plastid large ribosomal subunit
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0045430 chalcone isomerase activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015038 glutathione disulfide oxidoreductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005504 fatty acid binding
RNA-Seq Expression