Spo25288 (gene)

Overview
NameSpo25288
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionActin depolymerizing factor 4
LocationSpoScf_02273 : 36669 .. 40151 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACCCCACAGAAAGAAAAGAAAAGAAAAATACACACATAGAGAAATTTAAATTAAAAAAAGAAAAGAAAAAAAAGAAATCAGTCTCCATTTTATACCTCCCTTATTTCCCATTCTCTCTCTATCTGCGTCTTTCTCTCTCCATCAAAGCCCTATATTCTCTCCATTTTCTCTCTCTCCTACTCTCACAGGTGCTGCTACCACTTCACTCAGAACAAGAACAAAAACAAAAATGGTATAATTCTTTTTTAAAAGTTTTTTTTTGTTAATTTTTAGTTTTGGATTCTAGGGTTAGTTCTTTTGATTATGATTTGTGTTTGATTGTTTTGGAATTATGGTGGGATTTTTATTTTATTTTGGTCTTTTGCTTTTCGATCTGGAAAATTGTGAACAGGACGACAGATTTAGTTTGAAAATTTTGGATTAATTTCGGGAATTTGAGCGTTTTTTCGGGGATGTTTCATGAACAATTATGCTTTTTTTGTTTTCTCCCTGATCTGAAAGTTATTTATTCTTTTTTCTTAATCTTTATGAAATTTCTGCTGCTACAGAATCGAGCTCGGGAATCAATAGCATCTTATGCGCTGGGATTTTAGAAACTCTTGTTATTTTTGGTATTTATTACGAATTTTATGAATTTGTTTCTGACTTGGATAATTTTGGAGTTAGTGGAACACAACTGAGGATCTGTAATTTGGTTGAGGAATCATGTTGGTTAGAAATGGGTAGCTGCAGTAGCTCGAATTCAGTGTTATTCTAAATAAGCTTGAGCTAATAGTATAATTTGTTTGATTGGATGTGGTGAATTTTGTTAGAAAAAAATTGTGGTGAATTTGATAACACTTCATTTGTTTCGTGCTATTGAGTATATGGTTATTGGCCAGATGCAATGATGATCGGTAATGTGTCTATGTTTGGATGTGTGGTTGAATGTCTTGAAGAAGATTTTGTGATTCGTAATAAGGAAATCCAGTGCATAGAATTAGCAAATCTTATTTTGTGGATATTGTCCATCTTGAGGACCCTAATTTTAGAATGTTGTTGATGTTAGAGAGTGAACCCAAGTGTAGACACTGCGATTTCCCGGGGATATCTTGTGTTGTGTGGGGTTTTGTTAAACACTTGTTGGAATTGTCTGTTCAATTTTTTTGACGCGTTGGAGTGTGTGAACTTGGTTCGTGGTTTTCCTGGTGTATGAGTTTGGCTGCTGATGACCTCTCTTAAGTTTACAGTATGTTTTACAATTGAGGTCCCAAATCTAGAGGGGAAAGGAGCATTTTCGTATGTGCTGTCTCCACTTCTCATTTGAGCTTCGGTTTTTATTTGTTTTGCTACCAAAGCACTTCGGAAATCAATATAAAAAAAGAACCTCAGTTCATAGAGCATTGACGCTGGGTTATGAATCTTCAAGAGTTTAATTGTTTCTTTGGTGGCATAGAACCATTTTTTTTTTTGAAGGAAATAGAACCATTTTCTTTATGCATATAGTTTCTTGTTTATTTGAGATGTTGGGTTTCCCTAATTAAGTGGAGTAAGTTCTGGATAACCATGAACTTCATTGGAAGGATTGTATTTGTGACCTTTTGAGTGGAAGAGGATGGAGAGAGCTTTAGTTTACAGAAAAGTTACTAAGTGCTGTGGTGTCAAAACTTTAACCATTACCCAGTATGCTTGGTAATAGAAGAGCTTGTAATTGTAATATTATATTATAGTTATCCAAGGCTATGAAGATGCAAGATTGAAATTTATTTCTCCTTTGATTGCGCTTCTTTTTTTAATTCAAAGTGCAGCTAAAAGCTTTTAGCTAATTTTAACCAAAAAATTTCTCATGCAATGTTTCACTTAATTATTTCAGTACAACATGTGCTTTTTTCTAATATTTCTATTGAGACCCATCCAACAACCATGCTTCCAAATTCAGTGATCTCACCTTGGATCCTCAAAAAAATTTCTTTGAACATTACCCCTCATCCATTTGATGCCAATTGTAACTTGTGAGATTATAACAGTTCCTTGTTGATGGCACAAGTAGAGCTTAAAGGAAAATTAGGCTTTGGAATGACTTTTCTATGAAACTTTTGATCTCCAGTCATTGAGGACTATGTGGTGTTTCTGTCCACATAGTTTTGTCACTTTTTTGTTGACATGGTAGTATATTTTGTCATATGGTTGTGACGTATATTGACCTTATTGTATAGGCCAACGCTGCATCAGGAATGGCTGTTGATGATCAGTGCAAGCTCAAATTTTTAGAGCTGAAGGCGAAAAGGACTTACCGCTTCATTGTATTTAAGATTGAAGAAAAGCAAAAGCAGGTGGTTGTGGAAAAGGTTGGTGAGCCTAACGAAAGCTACGAGGACTTCACTAAGAACATTCCTGCTGATGAATGCAGATATGCTGTGTATGATTTTGATTATGTGACTGCTGAGAATTGCCAAAAGAGCAGGATCTTTTTCATTGCATGGTAATTTCTTGATCAGCCAAAACAAAAGCACTCAGTAAAGTGATTGATTATATTAACCCGTCCAATTGATGGTAGTCTCTGTGATTGATTAGATTATATTAACCCTTTGAATTGCTTTGAAAGGTCCCCCGACAATGCAAAGGTGAGAAGCAAGATGATATACGCAAGCTCAAAGGACAGGTTCAAGAGAGAGCTGGATGGTATTCAAGTTGAATTGCAAGCAACCGATCCATCTGAGATGGATTTGGATGTTATTAAAAGCCGTGTCGTGTAATGCTTCACACGATGCTTCACTGCCTTGATTGTGCGTTATCTATACGGTCCACTTTACCTATGTTCAAATGTTAATACCTTCCTAAGGGGCAGTAGAATTTGCTTACATATAATATTTGATGGTTGTTGCAGTGTTATACTGATGTCTTTTTTCTTCTGGTTCGGTAAATTCGGAGAATTACATTAAAGATGTGTTATTTGTGGGATTTCACTGGTGAGCCTAGCTTCAATGTGTATGCTTGGCTATCTGTTTTGTGTATTCATTTTCTGGGGTGAGAATATCCTCTGATATGAGATAAGAGGACCTCTTTTCTGTATCACTAATCCATGAAACTTTTTGGCTGTTGCTGACATATGGAGTCCTTGATCCTTCTAATCCATGAAACCTTTTGGCTATTGCTGATATATGGTGTCCTTGGTCTTCTCTTTAAATGTATGTGTACTGTTCCTGCTCTAACTCAGGTTTTTGTTTCTTTATTTCTCTTGTTCTTGTTACAACTTCCTGTTCTTGCTTCTTCAAGTTGTAACAGTTTGTTGTGATCATAAAAGATTAATTAACCTTTTCCAACTACTTCAGTTGATGTTTCTTGGTTTGAGTTTGGTAACAGAAAAGTACTTAAAATCTTGTGATTGTTTTTTTGGGCACAAATATCCTGACCTCTCTCAAGGTTCACCACCCACATGCCCAAACCTCTTTCGGTGATAATGAACTCGAACCACCCAGGTGGAAGAGCTTACCACCCTTTC

mRNA sequence

ATACCCCACAGAAAGAAAAGAAAAGAAAAATACACACATAGAGAAATTTAAATTAAAAAAAGAAAAGAAAAAAAAGAAATCAGTCTCCATTTTATACCTCCCTTATTTCCCATTCTCTCTCTATCTGCGTCTTTCTCTCTCCATCAAAGCCCTATATTCTCTCCATTTTCTCTCTCTCCTACTCTCACAGGTGCTGCTACCACTTCACTCAGAACAAGAACAAAAACAAAAATGGCCAACGCTGCATCAGGAATGGCTGTTGATGATCAGTGCAAGCTCAAATTTTTAGAGCTGAAGGCGAAAAGGACTTACCGCTTCATTGTATTTAAGATTGAAGAAAAGCAAAAGCAGGTGGTTGTGGAAAAGGTTGGTGAGCCTAACGAAAGCTACGAGGACTTCACTAAGAACATTCCTGCTGATGAATGCAGATATGCTGTGTATGATTTTGATTATGTGACTGCTGAGAATTGCCAAAAGAGCAGGATCTTTTTCATTGCATGGTCCCCCGACAATGCAAAGGTGAGAAGCAAGATGATATACGCAAGCTCAAAGGACAGGTTCAAGAGAGAGCTGGATGGTATTCAAGTTGAATTGCAAGCAACCGATCCATCTGAGATGGATTTGGATGTTATTAAAAGCCGTGTCGTGTAATGCTTCACACGATGCTTCACTGCCTTGATTGTGCGTTATCTATACGGTCCACTTTACCTATGTTCAAATGTTAATACCTTCCTAAGGGGCAGTAGAATTTGCTTACATATAATATTTGATGGTTGTTGCAGTGTTATACTGATGTCTTTTTTCTTCTGGTTCGGTAAATTCGGAGAATTACATTAAAGATGTGTTATTTGTGGGATTTCACTGGTGAGCCTAGCTTCAATGTGTATGCTTGGCTATCTGTTTTGTGTATTCATTTTCTGGGGTGAGAATATCCTCTGATATGAGATAAGAGGACCTCTTTTCTGTATCACTAATCCATGAAACTTTTTGGCTGTTGCTGACATATGGAGTCCTTGATCCTTCTAATCCATGAAACCTTTTGGCTATTGCTGATATATGGTGTCCTTGGTCTTCTCTTTAAATGTATGTGTACTGTTCCTGCTCTAACTCAGGTTTTTGTTTCTTTATTTCTCTTGTTCTTGTTACAACTTCCTGTTCTTGCTTCTTCAAGTTGTAACAGTTTGTTGTGATCATAAAAGATTAATTAACCTTTTCCAACTACTTCAGTTGATGTTTCTTGGTTTGAGTTTGGTAACAGAAAAGTACTTAAAATCTTGTGATTGTTTTTTTGGGCACAAATATCCTGACCTCTCTCAAGGTTCACCACCCACATGCCCAAACCTCTTTCGGTGATAATGAACTCGAACCACCCAGGTGGAAGAGCTTACCACCCTTTC

Coding sequence (CDS)

ATGGCCAACGCTGCATCAGGAATGGCTGTTGATGATCAGTGCAAGCTCAAATTTTTAGAGCTGAAGGCGAAAAGGACTTACCGCTTCATTGTATTTAAGATTGAAGAAAAGCAAAAGCAGGTGGTTGTGGAAAAGGTTGGTGAGCCTAACGAAAGCTACGAGGACTTCACTAAGAACATTCCTGCTGATGAATGCAGATATGCTGTGTATGATTTTGATTATGTGACTGCTGAGAATTGCCAAAAGAGCAGGATCTTTTTCATTGCATGGTCCCCCGACAATGCAAAGGTGAGAAGCAAGATGATATACGCAAGCTCAAAGGACAGGTTCAAGAGAGAGCTGGATGGTATTCAAGTTGAATTGCAAGCAACCGATCCATCTGAGATGGATTTGGATGTTATTAAAAGCCGTGTCGTGTAA

Protein sequence

MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNIPADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVELQATDPSEMDLDVIKSRVV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25288.1Spo25288.1mRNA


Homology
[Close]
BLAST of Spo25288.1 vs. NCBI nr
Match: gi|902197140|gb|KNA13337.1| (hypothetical protein SOVF_117910 [Spinacia oleracea])

HSP 1 Score: 275.0 bits (702), Expect = 7.100e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI
Sbjct: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRVV 140
           LQATDPSEMDLDVIKSRVV
Sbjct: 121 LQATDPSEMDLDVIKSRVV 139
[Close]
BLAST of Spo25288.1 vs. NCBI nr
Match: gi|902111342|gb|KNA03751.1| (hypothetical protein SOVF_206070 [Spinacia oleracea])

HSP 1 Score: 274.6 bits (701), Expect = 9.300e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQV+VEKVGEPNESYEDFTKNI
Sbjct: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKVGEPNESYEDFTKNI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRVV 140
           LQATDPSEMDLDVIKSRVV
Sbjct: 121 LQATDPSEMDLDVIKSRVV 139
[Close]
BLAST of Spo25288.1 vs. NCBI nr
Match: gi|731318670|ref|XP_010669850.1| (PREDICTED: actin-depolymerizing factor 4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.1 bits (658), Expect = 9.000e-66
Identity = 128/137 (93.43%), Postives = 133/137 (97.08%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELK KRTYRFI+FKIEEKQKQV+VEKVGEP+ESYEDF  +I
Sbjct: 1   MANAASGMAVDDQCKLKFLELKTKRTYRFIIFKIEEKQKQVIVEKVGEPSESYEDFAASI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VTAENCQKSRIFFIAWSPD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDPSEMDLDVIKSR
Sbjct: 121 LQATDPSEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. NCBI nr
Match: gi|731318668|ref|XP_010669849.1| (PREDICTED: actin-depolymerizing factor 4-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 257.7 bits (657), Expect = 1.200e-65
Identity = 127/137 (92.70%), Postives = 134/137 (97.81%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELK KRTYRFI+FKIEEKQKQV+VEKVGEP+ESYEDFT +I
Sbjct: 1   MANAASGMAVDDQCKLKFLELKTKRTYRFIIFKIEEKQKQVIVEKVGEPSESYEDFTASI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VTAENCQKSRIFFIAW+PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWAPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDP+EMDLDVIKSR
Sbjct: 121 LQATDPTEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. NCBI nr
Match: gi|763811997|gb|KJB78849.1| (hypothetical protein B456_013G022900 [Gossypium raimondii])

HSP 1 Score: 248.8 bits (634), Expect = 5.500e-63
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEP +SYE FT ++
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTDSYEAFTASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VT ENCQKSRIFFIAWSPD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTDENCQKSRIFFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDPSEMDLDVIKSR
Sbjct: 121 LQATDPSEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3F8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117910 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.000e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI
Sbjct: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRVV 140
           LQATDPSEMDLDVIKSRVV
Sbjct: 121 LQATDPSEMDLDVIKSRVV 139
[Close]
BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QB58_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_206070 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.500e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQV+VEKVGEPNESYEDFTKNI
Sbjct: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKVGEPNESYEDFTKNI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRVV 140
           LQATDPSEMDLDVIKSRVV
Sbjct: 121 LQATDPSEMDLDVIKSRVV 139
[Close]
BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D098_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g037400 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.300e-66
Identity = 128/137 (93.43%), Postives = 133/137 (97.08%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELK KRTYRFI+FKIEEKQKQV+VEKVGEP+ESYEDF  +I
Sbjct: 1   MANAASGMAVDDQCKLKFLELKTKRTYRFIIFKIEEKQKQVIVEKVGEPSESYEDFAASI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VTAENCQKSRIFFIAWSPD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDPSEMDLDVIKSR
Sbjct: 121 LQATDPSEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVB6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g037390 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 8.200e-66
Identity = 127/137 (92.70%), Postives = 134/137 (97.81%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAVDDQCKLKFLELK KRTYRFI+FKIEEKQKQV+VEKVGEP+ESYEDFT +I
Sbjct: 1   MANAASGMAVDDQCKLKFLELKTKRTYRFIIFKIEEKQKQVIVEKVGEPSESYEDFTASI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VTAENCQKSRIFFIAW+PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWAPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDP+EMDLDVIKSR
Sbjct: 121 LQATDPTEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Match: A0A0D2V9F2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G022900 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.800e-63
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEP +SYE FT ++
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTDSYEAFTASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD+VT ENCQKSRIFFIAWSPD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTDENCQKSRIFFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDPSEMDLDVIKSR
Sbjct: 121 LQATDPSEMDLDVIKSR 137
[Close]
BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 2.100e-62
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDF  ++
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFD+VTAENCQKS+IFFIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRV 139
           LQATDP+EMDLDV+KSRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138
[Close]
BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.300e-61
Identity = 117/137 (85.40%), Postives = 127/137 (92.70%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKLKFLELKAKRTYRFI++KIEEKQK+VVVEK+GEP ESYEDFT  +
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFD++T EN QKSRIFFIAWSPD A+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDP+EM LDV +SR
Sbjct: 121 LQATDPTEMGLDVFRSR 137
[Close]
BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.900e-61
Identity = 116/137 (84.67%), Postives = 127/137 (92.70%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEP ESYEDF  ++
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFD+VTAENCQKSRIFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQA DP+EM LDVI+SR
Sbjct: 121 LQACDPTEMGLDVIQSR 137
[Close]
BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.700e-61
Identity = 115/137 (83.94%), Postives = 128/137 (93.43%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P ++YE+F   +
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFD+VTAENCQKS+IFFIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDP+EMDLDV +SR
Sbjct: 121 LQATDPTEMDLDVFRSR 137
[Close]
BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.700e-59
Identity = 108/138 (78.26%), Postives = 126/138 (91.30%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MAN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++K+G P E+YEDFT++I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYD+D+ T ENCQKS+IFFIAWSPD ++VRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRV 139
           LQATDPSEM LD+IK RV
Sbjct: 121 LQATDPSEMSLDIIKGRV 138
[Close]
BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Match: AT5G59890.1 (actin depolymerizing factor 4)

HSP 1 Score: 239.6 bits (610), Expect = 1.200e-63
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDF  ++
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFD+VTAENCQKS+IFFIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRV 139
           LQATDP+EMDLDV+KSRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138
[Close]
BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Match: AT3G46010.2 (actin depolymerizing factor 1)

HSP 1 Score: 232.3 bits (591), Expect = 1.900e-61
Identity = 114/136 (83.82%), Postives = 127/136 (93.38%), Query Frame = 1 

		  

Query: 2   ANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNIP 61
           ANAASGMAV D CKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P ++YE+F   +P
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYA+YDFD+VTAENCQKS+IFFIAW PD AKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPSEMDLDVIKSR 138
           QATDP+EMDLDV +SR
Sbjct: 133 QATDPTEMDLDVFRSR 148
[Close]
BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Match: AT1G01750.1 (actin depolymerizing factor 11)

HSP 1 Score: 228.8 bits (582), Expect = 2.100e-60
Identity = 108/138 (78.26%), Postives = 126/138 (91.30%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MAN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++K+G P E+YEDFT++I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYD+D+ T ENCQKS+IFFIAWSPD ++VRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRV 139
           LQATDPSEM LD+IK RV
Sbjct: 121 LQATDPSEMSLDIIKGRV 138
[Close]
BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 224.6 bits (571), Expect = 3.900e-59
Identity = 105/138 (76.09%), Postives = 126/138 (91.30%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MAN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EK+G P E+Y+DFT +I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFD+ T +NCQKS+IFFIAWSPD ++VRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMDLDVIKSRV 139
           LQATDPSEM LD+IK R+
Sbjct: 121 LQATDPSEMSLDIIKGRL 138
[Close]
BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Match: AT3G46000.1 (actin depolymerizing factor 2)

HSP 1 Score: 223.4 bits (568), Expect = 8.700e-59
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 1 

		  

Query: 1   MANAASGMAVDDQCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPNESYEDFTKNI 60
           MANAASGMAV D CKLKF+ELKAKRT+R IV+KIE+  KQV+VEK+GEP +SY+DF  ++
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDYVTAENCQKSRIFFIAWSPDNAKVRSKMIYASSKDRFKRELDGIQVE 120
           PAD+CRY +YDFD+VTAENCQKS+IFFIAWSPD AKVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVIKSR 138
           LQATDP+EM LDV KSR
Sbjct: 121 LQATDPTEMGLDVFKSR 135
The following BLAST results are available for this feature:
BLAST of Spo25288.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902197140|gb|KNA13337.1|7.1e-71100.hypothetical protein SOVF_1179... [more]
gi|902111342|gb|KNA03751.1|9.3e-7199.2hypothetical protein SOVF_2060... [more]
gi|731318670|ref|XP_010669850.1|9.0e-6693.4PREDICTED: actin-depolymerizin... [more]
gi|731318668|ref|XP_010669849.1|1.2e-6592.7PREDICTED: actin-depolymerizin... [more]
gi|763811997|gb|KJB78849.1|5.5e-6391.2hypothetical protein B456_013G... [more]
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BLAST of Spo25288.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R3F8_SPIOL5.0e-71100.Uncharacterized protein OS=Spi... [more]
A0A0K9QB58_SPIOL6.5e-7199.2Uncharacterized protein OS=Spi... [more]
A0A0J8D098_BETVU6.3e-6693.4Uncharacterized protein OS=Bet... [more]
A0A0J8CVB6_BETVU8.2e-6692.7Uncharacterized protein OS=Bet... [more]
A0A0D2V9F2_GOSRA3.8e-6391.2Uncharacterized protein OS=Gos... [more]
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BLAST of Spo25288.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ADF4_ARATH2.1e-6285.5Actin-depolymerizing factor 4 ... [more]
ADF2_PETHY1.3e-6185.4Actin-depolymerizing factor 2 ... [more]
ADF1_PETHY3.9e-6184.6Actin-depolymerizing factor 1 ... [more]
ADF1_ARATH8.7e-6183.9Actin-depolymerizing factor 1 ... [more]
ADF10_ARATH3.7e-5978.2Actin-depolymerizing factor 10... [more]
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BLAST of Spo25288.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G59890.11.2e-6385.5actin depolymerizing factor 4[more]
AT3G46010.21.9e-6183.8actin depolymerizing factor 1[more]
AT1G01750.12.1e-6078.2actin depolymerizing factor 11[more]
AT4G00680.13.9e-5976.0actin depolymerizing factor 8[more]
AT3G46000.18.7e-5979.5actin depolymerizing factor 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
score: 4.9
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
score: 4.5
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 7..139
score: 40
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..138
score: 1.4E
NoneNo IPR availablePANTHERPTHR11913:SF30ACTIN-DEPOLYMERIZING FACTOR 10-RELATEDcoord: 1..138
score: 1.4E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 3..138
score: 2.97

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
biological_process GO:0009909 regulation of flower development
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0032544 plastid translation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009790 embryo development
biological_process GO:0019408 dolichol biosynthetic process
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0009658 chloroplast organization
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0010162 seed dormancy process
biological_process GO:0050826 response to freezing
biological_process GO:0009845 seed germination
biological_process GO:0045694 regulation of embryo sac egg cell differentiation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016571 histone methylation
biological_process GO:0000741 karyogamy
biological_process GO:0019915 lipid storage
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0009933 meristem structural organization
biological_process GO:0006312 mitotic recombination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0000338 protein deneddylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016579 protein deubiquitination
cellular_component GO:0005622 intracellular
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009579 thylakoid
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003779 actin binding
molecular_function GO:0005507 copper ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo221850.70Barchart | Table
Spo024830.66Barchart | Table