Spo25323 (gene)

Overview
NameSpo25323
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 50383738 .. 50388454 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGATGGGTTTGAGGAAAGAGAAAATGAAGAAGAGGGTTTTAGGGTTTCAGAAGAAGAGATGGCGGGGTTTTTGCAGGGTTGGAGAAGATGGCGGTGGGGGGTTGCTGCCATTTGGCGGGTTGGTGGTTGACTGGTTGCTAAGCGGATGAACCCCGGTGCTTCGGAGTTTGTTAGATGGTCTTGTCTCCTTTGAGGGGAAATTGTAATTTTAATTCTAATTTTATTTTGCTCTCTTCGTTTCTAAATAATTAGAGTTACAATCGGATTTTCTGACTTTCATGTTTGTAGAATAAGTTGTATAATCACATTGATTGTCAAAATTTGCTATATAAACCACTAAGGCCCTGTTCTTTTTGGCTTAATTTCAAATTTCAGTTCAGTTCAGTTCAGTTCAGGAGTATTCAGTTCAGTTCAGTTCAGTTCAGTTCAGTTCAGCTCAGCTCTAAAGAACAGGGCCTAATTCAATGAACCGTCAATTGAATTCATGATTTGTTAAAGTGATAAAATACTGAGTATAAATATGTTAGTAATTTTGATTCTGAAGGCTTGTTTAATATCACCTTTGGTTTTCAATTTTGGGTTATATTAATTTCAAATTCATGTGATTTATGTGAAACCATGAAGTTAAAATTAGTCAAACTTATAAAATCCTGTTGAATTTGGAAACTGACAAGAAAAATTGGGAACAATAAAAGGCAACAAACAGGGCCTTAGCGATATAATAGATTTTTGTTTCGCAAAACATTATGGTGTGAACAATGTACATGAATCTTTTTTTTTGTTAAAGTTCTTAATTGTCTCGTTTCCATCAATAATCAATAGAAAACATGCTTTTACAAGTGAAAAAAAAAATACTAAAAGAGATAGGCTCAAATTCAAAGGGATCTTAAAACACAAGACACGTGACAATCTTTAATATGCTTGTTATCCAAAATACTTGTCGAAGTTTGTTAGATTGTCTTGTCGTCTTTTTTTGGGGGGGGGGGGGGNGGGGGGGGGGGGGATTCTAATTCTAATTCTAATTATCCCTTTGTTTCGAAATAATTAGAGTTATAATAGCACTTTCATGTTTGCAAGAAATGGCTGGACAATCACATTGATTGGCAGAATTCGCTATATAAACCACTAATTCAATAAACCGACAATTGGATTCATGATTTGTTAGAGTTATAAAATACACAAATATGCTTGTTAGCGATCTTATCCTTGGTAAAAGTGTTGATTCTGAAGGCTTGTTTAACGGAGTATCACCTTTAGTTTTCAGTTTTGGATTTTATTAATTTCAAATTCACGTGATTTAGATGAAATTATGAAGTTAAAACTAACCAAGCTCATAATATCATGTTAAATTTGAAAACTGTCAACAAAAAAAAGTTGGGAACAAGAAAAGACAACGAACAAGGCCTTAGCGATATAACGGATTTGTGTTTGACAAAATATTCTGGCGTGAACAATGTATAGGGAATTTTTGTTAAAGTTCTTAATTCCCTTGTTCCATCAATAATCAATGGAAAACGTGGCTTTACAAGTGAAAAAACATCATAAAAGAGATAGGCTCAGATTCAAAGAGACGTTAAAACATAAGACATATGACAATCTTTAATATGCTTGTTACTCCGTATTTAAATCTATAATACTAACAACACAAAATAAACAATTCAAATCAACATAATCAATAGTAAAACTAATTAATTACAATGGATTTAGAAGGGAAAAAATTTATGCAAATTTTCAGATAGGAAAATGATTCAAAATAATGTATACCAAGATTGAGTTTCCAGTAAAATTAGACGTTTCTAATTTGGGCCGATTTGTCGCTAATGCATACCTTTAAGGCCTTACGATCAATGGCATCGGCCTATCACCCTGGATTTCCTTGGTTATCATGCTTAGGAAAATTTTCTCAGTCCAAAACTCTGGTCCAAATTGCCCTATTTAGCAAGATTTGGCCCAATTAGAGGTGTAATACACTAATGAACTACACGCTATTAGCAGTTGAAATAATATTAGACATATTTTCATTTAGGGAGACAATTTACTAATTATCCAGGTCTTACAAAAACGCATAGGTGGAAAATCCAGTTGTTTATGGATATCGTCAAATATCTGCTAACGCATTTTGACAGTTAAAGGCACGTCATATCTACAAAGAAGCTAATCGTGCAGCTGACTATGTCGCAGCCCTGATCATTACATTCTGACCCAACAAGATATATACCTACATGTATATAGTAAAATTTCTTATTTTATCTCTTTAGATATATTATGATATAATTTTGAGACAAAACTGTCCTGCTTTTTGTGTACTTTCCGTTACCAAAAAAAAAGTCTCGTGACATCCTTGTAACACCTTAATAGATTGCGATATTTTTTTTAAAAAAAATGTAGTCACGACTAATAACTTATCCCTAAAACCAAATACATTTCTTTAATTTATCCTCATTCGTACTAACATATGAATTTTTGCCAAGAAGACATTCATCACGATACTAGTCCACAACTAAGGGTACTTGCCTCTTGCGAAGCCTTGATAAATTCATTGAGAAAAGAAGATACATTTATGCTTAATTAATCGATATTGAAATCCTATAGCATCAAATAATCAACTATCGTTGAAATGTTTATATCCATACAAAAAATTGTCTAATATTAGTTGATAATTAAATTTTGAACAACGGGTTAGAGGATCAATTCTTGGCCCCTCAAAAAGTTCAGCGAAAGATCTTCCATTGTTTATTATTCCTCAATTATATTTTTGTACTTATTTTTATATCCGAGCCACCCCGTATAGCAATATGTGGATCAATAGTGATAATGGATACCCAACTCTGTCATAACGAAAGCGGCAAAATAATATTTTCCTAATAAAATCAACAAAATGTAAATTTCTTTGATGATTTTTCTTTTAATGTAGCAAATGATATAAACGAGATTTGATATCGACTTACGACCTCAGCGAATAATCTAGATAACATTCACATACTCATTAAACAACAAAGTTAGAGTTTCCTACGACGATGCCACGTATTAAAGTTTTGTTACATTATTGTATCATTCGTTTGTGGACTTAATATCAAAACTAAAAATGTCTTTTGCAAATCACTAAATACCATACAATGTTTTTTTTTGTCTCAAAATGGATAAACCTTGTAGCAAAACAAGTTTCAATACAAGCCAATAAACTTTTTCTAGCTTCAAACTACACCACACTTCCCCCATTCACCTTTATCTCTTTGTAATTCCTCTCCTTCATTGAAAACCAATTTTGTTTTTTTTTTGAACTAATCGAAATGAAAATATAAAATATATTTAATTAAATTATCTTTAAAAATTTTGGTGGATGTGGTCTTACTGTGTTGCCACGTAACAGTTTTCTATGCTATGTTCCAATTTTTATTTGTTTTTTTATGACCGTGAATTGTATTTTTTATTAATTTTGTAACTACTAAATAAAAAAGTTTCTTTTTTTTGAGTATTTTTTTCTCTACTTGAAGATTTCACGAGCCCAAGGTTTTTTTGGCCACTTCACTCTAAGCAAGAACTCTCAGGTAATCTACTCCTACACTAATTTGAAGGTTTAGTTTTGTTAAAAGTGGGATCTTTATGATTAATTTAGGAAATTTTGTTTGTGATATTATTGATAATTGATGGTTAATTTGTTATTTTTTTAATATTTGGATTAATAGCACTAATTTAGGAATTTTGATTAATTTGTTTGTTGAATACGGAAATGCATGATTACCCGGTGGGATTTATGTATTGATTTTCATTAAATTGGTTTTTGAAAGATTGAATTTAGTGATTAATTACATGATTACACAGTTTTTCGAGGTTTGGTTGGTTGTATCAGTTGATTATGATAAAATGGCTTAATGATTGATTAAATTACCAGTGAAATTAGGAAACTCCATTAATTAAACCTGTTGTTGTTTGGTAACGATTGATGAAACTTGGAATTAAGGGTTTGTTATGCACAAGGGGATGATTTGTGTTAACCATATCCTAATTTTTAGGGGGTTATTGCTGCAACTTCAGTGATTGATGCCATAATTCCAGTGCTGCTGGTTTTATGGTCCTTAAATTGGTTTGATTTTGGTATGTTGCTATCAATTTTCTTGGATATTCGAGTTCGTCGAAGAAGATATCTTTGATCATCATGACTGAATGACTGCTTGGTTCTTGTGTTTTTAGGCTAGAGAAGGGGGGCAGAAATGACCCATCATCTCAGTATTTGGCTGGAAATTCGTTCATTTTGTTTCCCTTTGTTTCCTCGTTTTCCGTTTTGATGCTCGTCCTCACAATGAAATGTTCTTTTCCTTTATCGAGATCCGACATCCCCATCTCCTATCTAAAGTGATCTGTTTGATTAGTCCTCATGCCAACATGCTTAATTTATTTCTGATTATGTATTGCTTCCGATTCCTTTCATTGAATGTGTAGCCAGTAATCCCTGAATGTTCTTGTCTTCTTATGATGATTAAGCATGTAAAATTGTCCAATGGAGTTCGCGGTTTGTAGGATAATGGCATGCAAAGTGATGTTTCAATATATAGACTTCTAGCCTTTGTTGTTTGTGATCAAATCTGTCTATTGTTATTGCTCGTGTATTGTCTATCTTTTATTCTGAAATCTAATATGACTTCTACGGTTGAATTTCAGGTTTATGACCTGAGCTCATATAACTGGCTGCTGTTTAGTCTCTCTTCTTGA

mRNA sequence

ATGGAATTGATGGGTTTGAGGAAAGAGAAAATGAAGAAGAGGGTTTTAGGGTTTCAGAAGAAGAGATGGCGGGGTTTTTGCAGGGTTGGAGAAGATGGCGGTGGGGGGTTGCTGCCATTTGGCGGGTTGATTTCACGAGCCCAAGGTTTTTTTGGCCACTTCACTCTAAGCAAGAACTCTCAGGTTTATGACCTGAGCTCATATAACTGGCTGCTGTTTAGTCTCTCTTCTTGA

Coding sequence (CDS)

ATGGAATTGATGGGTTTGAGGAAAGAGAAAATGAAGAAGAGGGTTTTAGGGTTTCAGAAGAAGAGATGGCGGGGTTTTTGCAGGGTTGGAGAAGATGGCGGTGGGGGGTTGCTGCCATTTGGCGGGTTGATTTCACGAGCCCAAGGTTTTTTTGGCCACTTCACTCTAAGCAAGAACTCTCAGGTTTATGACCTGAGCTCATATAACTGGCTGCTGTTTAGTCTCTCTTCTTGA

Protein sequence

MELMGLRKEKMKKRVLGFQKKRWRGFCRVGEDGGGGLLPFGGLISRAQGFFGHFTLSKNSQVYDLSSYNWLLFSLSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25323.1Spo25323.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo25323.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25323.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25323.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25323.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0015976 carbon utilization
biological_process GO:0016310 phosphorylation
biological_process GO:0015979 photosynthesis
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0035999 tetrahydrofolate interconversion
biological_process GO:0032259 methylation
biological_process GO:0006563 L-serine metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
molecular_function GO:0046872 metal ion binding
molecular_function GO:0050242 pyruvate, phosphate dikinase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004372 glycine hydroxymethyltransferase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016301 kinase activity
RNA-Seq Expression