Spo25367 (gene) | SpinachBase

Overview


Name	Spo25367
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Clathrin light chain 2
Location	chr1 : 23651323 .. 23661623 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTAAAAGTTGCTAAACTACCAATAACATGCTTCATCTTCTGAAAAGGCATATGTCCTACTCTAAGGTGCCTAACCTCTGCTTATGATTTATTTGAAGATGCTGCTGCAAGACATGTTGTTGCTGGTGGTTTGATTACTTCATCTTGGCTTGGATTGACACTGTAAAGTCCAGATCTCACACTACCAAGAACCTGTGGCCTTTTCATTAAATGGCCCCGAATATAACATTTGTCAGCAGTGAATGAGAGAATGCATTGATGATCTGAACACAATTTGTTTTCATACAACAGATTGTAGTGGAACTCAGGTACATGCAAGACACCTTTTAACTATATATTCTCATTTAAGGTGATTGTCCCTTTATGATGTATTGCTACCCTTTTCCCATCAAGTATAGTAATAAAATCATCAACTTTTACTGGCTCATAACTATCAAATATGCTCAGGCATGCATGCACACATATGATCTAAAGCCCCACTGTCTAATAACCAGCTAGAATGAGAACAAGTAAGAAATCAGTAACTTGTACCTGCCATGAATGCATGACCTGATCTGTCTCCTTCTTCTAGGTGAGTCGCTGCGGTAGGAATATTCTCACTTTGTTGCTTGTTTAAGAGACTCAACAACTGAGTACATTGTTCATGTGTGAGAAAACCAGGTGATTTTTTTGTGGTTGTTCTCTATCATACTGTAATTGTTGATATTCTGAAATCATATCATCACCATAACCTTCTACTGAATAAGCAGCTGCTACTACTCTTTTATCATTTTTGAATCCTGCAAAACCTGGTGGAAAACCATGCAACTTAAAATATCTCCTTTGTACTCTGTCCATTCACTTTACAGTGATCGCAATAATAGCTTGAAGTAGGCCTTCTGTAAACAGGTGCTTTGTTCCCTCCAGAACCAACTGCATTGTTGTATGAGAAATTATTTCTGCCATAAGATTGTTGTGATCCTATGTAGTTTCCTTTGTTATGATAAACATTGTATCTCCTTATGTCTGTTGCAAAGGCATGGCTCTCATGATGTTGAACTGAGGGTACACTGAGTTCTCTTTTCCTTTCTTCTTGTGCCAACATTCTATAGGCATGAGATATAGTTGGCAGTGGTTGATCCATGAGTAGATTTTGTTAGGTTATGATACATATAAATGAATATAAATCATGCGGAAAAACCATAAAAGCCAGGATTTCCAAATTAATTGCCACATAACAATTAGCATAATTTAGGATGCATACTCTTTGTAGCGTGCCCTCCCTTGCTGCGCCCCAACCGAACAAGAACAAGTCTTTAGGACTCCAAGTGTCGTCCCTCCGTAGAAAGTCCACATCACGTCCGGATCCGCCTTAGGTTTGACTAACTAGAATCGCCCCAAAGGTACTATGTATTTTCGGCTATTATGAGGCAAAATAAGTGATTGAATTTTATGCCTAAAATTCTCTTGAATACTTAGAAAACTCGTTATAAATTGTGAGCATTAATCACCTATTTATAGGGTATGGAAAAGGTATTGAAATCCTACTAGGAAACGAATTAATTAATTTGAATTTAATTTAAACTCTATTAATTAATTTATCTAGTAGGTATAGGAATTTAATCTTAAACGAATCCTACACCGTTTAGGTTTCGTACGCAAACACAAACACACACGAGCATGACCCGCATGCGCGCAGGCCATGCCCGCGCAAAAGCCCACGAAGCTGCCGCAGCCTAGGCGCGCGCTGGGCCTGGCGTGGCCTTGGGCTGTTTGTGAGGCGCGCCACGCTTGCTGGACGTTGGCCTGGCTTCGCGCAGGGCCTTCGTCTAGCAAGCTCGTCCGATGCTAATTCGTACGACGCGCTTCCGATTATTTTCCCGATTCCGGAATTCATTTCCGATACGAACAATATTTCACATTTCCGATTCCGAAATTAATTTCCGCTTCAAACGAATATTTAATATTTCCGTTTCCAGAATTATTTTCCGATTCCGATAATATTTTCGATTCCGACAATATTTCCGTTTCCGGTAATATTTCAGATTTCGGCAATATTTTCATTTCCGATAATATTTTCCGATACGTACCATGTTTCCGTTTCCGGCAACATCTACGACTTGGATAATATTTATATTTCCGATACGATCCATATTTCCGTTTCCGGCAATATCATCGTTTCCGGAGTATTCATTTATTTGTCTTTGACGATCTCAGCTACCACTGAAACCAAGATCCGTCGATTCCGAATATCCACATATTGAGTATTTAATGCCATTAAATACTTGATCCGTTTACGTACTATTTGTGTGACCCTACGGGTTCAGTCAAGAGTAAGCTGTTGATTAATATCATTAATCCACTTGAACTGAAGCGGCCTCTAGCTAGGCATACAGTTCACTTGATCTCACTGAATTATTAACTTGTATAATTATATACTGAACCGCATTTATTAGACTTACCATTAAATGCATACTTGGACCAAGGGCATTATTTCCTTCAGATTTCCCCTTGCTGTGGCTAGATTGCATAAGTCTATGATCTTGTTGCATTTTAGAAATTTTCTGTGTCAAATTGCAAGTGCACAGATTACAGGTGCAACAAGGCAAGAGGTTTGCTGCACTCAACTTATCCCAAATAGACTTGATTTCAGTAATTTTTTTGATATACTTTGTGTTCCCTGAGTAATATCAGAAGCTTGTTGTTCTAATGCAAACAATTGAGGTCCAGAAACAAATCCAAATCTCTCTTCAAGATCCAGCCATTTCTCTAGTTGTGTTAAAATACACCACACTCTTTGCAATGCTTGAATCTAGGTTAAAAAGCAACCAGTATATCATCATATCTTTACATCTCATCCAAGCTTGATATGTGCTAGCAGTAGCATCATGTTTGGCTATTGATCCATATACAAACCCTAATTTATTCTTATAAGACATGGAGATCATCATACTTCTTCTCCAGTCTCCATATGCTTCTCCTTCTCCTTTAAGTTTTACTGAAATCAATTGATTTGCAGTATTGTCCGTAGGATGTAAGTAAAATGGACTAGAAGGATCTTGATTAGGAGGAAAAGGAGTAGTTTGTTGTGTCATTTTTCAACAAAGAAAAACAGGAAGGAATGAATCTAAGAATGAAGTATTTCAGATTTTATGAGGAAGAAATTGATAATCTCAAAACTATTTAGCAGATTTGCAGGTGGAAAACCAACAACAATCAATCAATGGCAGAATGCTCAACCAAAAATAACCAAAAATATTTCTACAAATTTCAGAAAGAGGAACAACAGACCTCTAATTGCAGGATGAACTTCGGATTCTGAAGAAACTGACTGAATTTCTGGAATCAACTAAGTTTATTGATTATGGTTCTTTAACACCCACTCTGATACCATGTTGAAAACAAGCTAATAACAGATAATAAGAAACATAATATTTGGTGCTCAAGCAGCCATTGAAGGAGCTGCATAGAAGCTTATATTTAGAGAGAGAGAGTCTGCTGATACAACTTAGGTAAACACTCTACAACCCTTACGAAAGAAAGAGCAAGGAATATAAACTACTCTACTGCAATGTTGTCACAACCAATCAACATACAGGATAAAAACGAGCAACCAATCATAATCATCATAGGTGTCATAAGCTGACAAACTAGATGTCATAAGCTGACAGAATAACAGAAAGTCGTTACAAGGGATGGAATCAAGTGTGGGCCAAGACTACCCTTGTTGTGGTGAGCTTGCCTTGCTGGTGAAGTTTCATCAACTGATGTAGTATATCCAACAGCTTTTTTGGTACTGATATATTCCATAGGGACACAAATCACATGATATTTACTCTGTAGCATTCCTCGTCAAATCATTGCTAAGTATTCCCTCCGTCCCAGAAAACTCGCACCGCTTTCCTTATAAAGTCGTACTAGAATACTTTAACCATTTCTATAAATGGCATATTTTTTTTTTTAATTTTATATGTTTCTCTCACTTTCTTAAGGTCTCATTTGTATTCCTAACATCTAAAAAACATTAAAAAATCACCCCACCCTCCCTCCTTAAAAGTTGACACATGACCCACTTACTATATTTAAAAAGTACCAATATCCACAACGGAGCAACGCTCAGATTGTGCAGGGGTGTGCATGGTGCTCTTGGTGCACCTGTCCCAAAACGCACATAAATAACAATAAAACGCAACAAAAATAAAAACCGCAAAAAAAAAAGAACATTAACAAAAGAACATTAACAAAAGAACATTAACAAAAAGAACACTAACAAAAAGAACACTAATATTGACAAATCAGACAAAAGGTACAAATATAAAAAGCAGTTATATTTTTTCTTGTTCTTTTAAGTTCTGGAAATGTTCTTTTCCAACCAATTTACAGTATGTTCTAATTAAAAAATAAAACGACGAACCTTTGATGAACTTTAAAACCAGATTTATAATTTTTCTTGTTCTTTTAAGTTCTGGAAATGTTCTTTTCCAACCAATTTATGTTCTAATTAAAAAATAAAACGACGAACCTTTGATGAACTTTAAAACCAGATCTATATTTTTTCTTGTTCTTTTAAGTTCTGGAAATGTTCTTTTTCAACCAATTTATGTTCTAATTCCGTTATTTTATTTATCAAAAGATATCTGAAAACAACACTATAAATATGTAAAAAGAACAATTGCTGATTCTAAAAAAGAACACACTGTTTTGATGCCACAGAAATAGAAAGTTATAAGAAAAGAACATTAAAATTTAAAAAGAACATAGAATTAAGAACGAGAAAATTTACCTTAATCACCCGATGCACCTTCATCAACAGCATAAACCTCTTTGAATGAATAAAAAAATTCAAAAAATAGCGAAATTGAAATAGTATTTCGCTTAATAAACTAGTTTTTTGTAAACGTAATTCAATTAAAATCACATTTCAGAGAAAGAAGGAGGAGAAAATTTGTTTTGAACTTTCTCTCTCATAAAATATCTCTTTTGTTGGGAGAAACTAAAAGCACTCCTCTTTCTCTCTCAAGAATGTGTTTCTAAAATGAGAAGTTATGAATCCAATAGGAGAAATATTATATATACAGAAAATAAAAAAAAAAAAAAAAAAAAAAAGAGGGGGAAGGAGAAGAAATACAAGCCATGTTCATGATAAGAACGGTGCACTTTTTTTTTTTTTTTTTGGGTTTTGTTGTTCTGTTCTTTTATGTTTATTAGATATAAATCTTAATGTTCTTTTATGTTTGTTCTTTTTTCAAAAAGTACAGTATTGAAGAGCAAAGGAAGCTTTTACTTGACCAGCAACAAATGATGTTAAATCTTCAAAAACAGCTGAAAGAACAAGAAGAGAGGCTGAATAAACAGAGCAATTCCTCAAAAGAACAAAAAGAGGATGAACCTAAAAGAACATTATAAATAAAGAAAAAGAACATTATAAATACAGAAAAGAACATATCATGTAGAACACTTATTTTAACCATGTAAAACAACATTACCAATAAAAAAACGAACAACAATAGAGCATAAAAGAACATAATAAAGTAAAGAAAAAGAACATTAAAAATAGCAGAAAAGAACATATCATGTAGAACACTTATTTTAACCATGTGAAAAAAAAACAACAAAAAAGATAAAAGAACAACAAAAATGGTAAAAGAACAATTTGATCTGAAGTGTGTAATATCAAAAGAACAACAAGCTAAAGCAAAAAAGAACAAAGAACAACAAGCTAAAGCAAAAAAGAACAACATGTTCAATAATTATTTTCTGTATTATTACAATCTCTTAATACATATATGAGAACCAATATATAAAAGAACAAAAGATAAGACTAAAAGAACATATAAAATCGAAAAAAGAACAGAAATCAAAATCATCAGAAATATATAATCAAGATACATTAATCATCAAAATTATCAAAATATAGAATCAAAATACATTAATCAAGGTTATTGAGAAATGCAGAAATCGAAATGATCAAAAAAATCAAAATAAATTGAAATGATGAAAATAATGAACATGGAAATCAAAATCATCATAAATAAGTAATTCATTTTAAAAAATTGAAAAATTACCTTCACAAATCGGATTATCAGCAGAGGAATTCAAATTTGAAGAAGAAGAATCAATAGAATTTGATATTGAAGTAGAAAAATCAACCAATATCTGAGAATTTTCCATTAGTTTCTCTCTCCTCTTCACAGTTTCTCTCTCCTTTCCATAGTTTTTCTCTCTCCTCTTCACAAATTCTGATTCGAAAATTATATAAAAAAAGGTATATATACCAGAAAAATGGAGTGAAAAACAAAAGAACGAAAAAAAAGGGACAGAGCAGTCATTGTTCTTTTTTTTAACAAAAGAACAACGTTTGTTCTTTTTTTATCAAAAAAAACAACGTTTGTTCTTTTCTTCTCCGGATTCAACAAGATATCCGCGTTTTATATTTATTGCATGTCGTTTGGACACCAGTGCACCAAGAGCACTGTGCACACCCCTGCACCATCATATTTGCGCAACGGAGTGCTACTTACCTAATTAAATAACAAGTCAATTAAATTGTCTTAAATTACATGGCTATCAAATAAATGTGAGTTTTATTTATCCACTCCGAAGTCCGACGCCCATCTCTCTTGGTCTTCTTACCACGGAGCCAAAGAAGCAGCGAGCATTTCACATTCTCTGACAAACTCCCCCGAGTTAGGAGCCCGGTTTACCCACTCAACTCGAAATGTCTTCCTTCCCTAACTCGTATGACGAACTCGGCCCTGACTCAAACCCCGCCGAGTTAACTCACCCCTTCGACAACGACGATGACTACGTAACAGCAGGAGGCTACTCCAACTTCGCCGATTCCGAGTCGGTCAAGGAATCGGCTGATGAATCGGTGGTTTTTAACGGTAACAGCGACGACATTTTCGGATCCAATGATGTTCCGGCGGGCAGTGGAGCTTTCTCCGAATCGGATGGCCCGATGTTGCCGCCTCCTTCGGAAATGCAGGAGGAAGGGTTTGCTCTTCGCGAATGGCGGAGGTGAGAGAAATTCATCGCTTTCAATTATTTTCACTTATTTTTTTTTGCTTAATTTTGTGGAATTCTGAATTATGTTGTGAGATCTAAGTGCTGATTTGATTAATTGGCTATATAAGTTAATTTAGCCATTTTAAAGTTGAATTTGATCCTAGTTGTTGAAAAAATTTACTCTGATAGTCTGATTACTTATGCCATGTCCTATACCTTGCGCGTGAAATTTTAAGTAGTTGGCAAATTTAGGCCGTACAATTGTGCAGTGTGCTTGAAGAAGAAAATGTAGTTCCACAGTGGTTGTATAATGACTCAATGAGTAGTGATTATGGAGGATTATCACCTTCCGAATTTGGGGCAAATTATGAGCATTAATCATAAGGTCATACAGCAGCAGTTCGTAGATTGATATAAAGAGGGGAAGCTTTTTATCGTCTTGAATCGTGAACGTATGTTTTCGTCTACGCCTAGTAGGTTCTCTGAGTTTTGTAACGCAAGTGTGTATTTGGTTGGGGGATTTGGATTGTTAAAGCAGCCGTCTAATGCCTGCAGGTGCAGTGGGGTGTACGTTGTAGTGGTGGTGGCCCTGGTGGGGTGGATCCGTGGGTGTATTTTGGGTTTGTATTGTTGTTAACTTGTTGTACTGGTCAACTTCACTATGATTTTGCCCCAATTGGAAAAACTTGCATTTTGACGAATATAAGGATGGACTACTGGTGATAGATGTTAGGGAGAACATGACAGTATGACACCATCAAATTATTTGTTAGCAGAAATCCAGAACTATCTATTTGAAACGTATCTACAGAGAAAACAGGACAGGCATTGTGAAACCGAGTTAGCAAGATGAAAACCTATCACGGAGCTGAGGCGAGATCAATTGATGATCAACAGTATATGAAATCTGCCTTAGTTATCACTTTTTCAATGATGTTTTCACCTGTGGTCTTTCAAAAATAGCATTTCTACTGACCTACACTGTTCTGGTAAGGTTCTACACCCCCTAGACCTCCCCAAAGCTCAGCAGTGGCAGGATCCAAACTTCCTTTGGACCCTATGTTATGTTACATGCATGTTTGTCGTGCTAACAGCTTTTAGGTTTAAGGCATTTATTCGTTGAACTTATATGTGATTTGTCATTTTTTAAACATTTTGATGTATAAATAATGGTACCTTTGATATTTGACATCGAGTACAGGGCAACATGCTAATTGATTGTGTTGTTATCATGTTTTGACAAGTTCTGTATACACATATCTGTGTCTTCTCTATTTTTTAAGAAATTGAATTGCTAGAAGGGGACCTCATACGTTGTCAAGTGGTGATTGATTTCATTGGGTTTGAAGGCAAAATGCTGTTCGACTGGAAGAGAAGGAGAAAAGAGAGAAAGAAACACTGAGCCAGATCCTCGAGGAAGCAAATGAGTACAAAGTTGCCTTCCATGAGAAGAGAAAGGTTACATGTGAGAACAATAAAAGCAACAACAGAGAGAAGGAGGAGGTAAGATTTTGCTTTCTTGATCTTATGCTATTTTGAAATGTACTTATTTTCCTTATTCATTTATTTTAAACTTTACTTATTTTTATTATCTCTTACAATATTTCTTCTATAATGTATATACATTTTTCTCTTATCTTACTTTCATTAATTCCACTTTCTCTTCCTTGTTTTCTTCTTTTTACTTCCTGCTCCTTTCTGGTTTGATTGGTGACAGTGACGATCTCCTACGACGATTCATGTTAGCCGACCCAAATCATTTTGGGACTAAGGCTTTGTTGTTGTTGTTGATCTTATCCTGTCTAGGACTGTTAATTAAGTTTGGAAATGGACTTCATTTTTTCTTTGGGACGTAGAGAGACAACATTTACAATCTTACAGTATTTTTTGATGTGTTGATTGTTGGATGTTCATTTAGGAGACTTGCTGTTTTTACTGTTTACTGTAGCTAGCAAGTAGTCTAGTCGCGCCAGGTTCATGTTCATGTTCATGTCAAAAATACTTGGGCTGAGAATACTTTGACACTATCTTGACCAATTCTATTTCATGTTGTCACTTTTTACCCACTAGTAAGAAATTTTGGAGGATCTTAACAGTAAGCCACTTTTGTTGTTTGGTTATGTTCAGGTTTTATCTACTCCCTGCCTGTTTACATTAAGATTTGGTACCTCTTCTGTTGGAATTTCAAAGTTCTCTAAATCACTCAATATATTATGCAGTTTCTTTTTTGCCTGTGTTTGAGAGTTCAACTAACTTGTAAGTTGTAACATTAAAATGGGTTAATCTTGACAGTTGATCTCACGAGTTGAGAAGTCTAATACAGAGTGCTAACTGCTAACTAAGTAACTAGCCTATTTTCTGTCCATGGTGTGTTATAGGTTGCATAGTTTTTTCTGCCTTTTCGCATTTAGATAGCAAGAAGAAATGAATTGCAAATCATTTGCTATGTAATGAATATGGGCAACCATATTATCTCTCTCCGATAGCAATTAGCAGTGAGTTGTGTCCTGAAATAGTCGTGATAATTTTTGCAGTTATTTCTGGCCAACCATGAAAAGTTCCACAAAGAGGCTGACAAGAACTACTGGAAGACAATTGCAGAGCTAATTCCTAACGAAGTTCCTGCAATAGTTCAGAAAAGAGGGAAGAAAGAACAGGAAAAGAAGCCTTCTGTTGCTGTGATTCAAGGACCAAAGCCTGGGAAGCCAACTGATCTTGCAAGGATGAGACAGATACTAGTGAAGCTTAAACACACTACTCCTAAGCACCTACTACTTGATAATAAGAACAATGGCACCACTGAACCCCCCAAGACTGCAGCTGTTGAAACCGTACCAGAAGCTGTAGTCGCTGCGTGATTGGCTGATTTGGGTTCGTCTCTGTATTTATATCCGACGATATGATGGTCGAGCCTTGACAATATTGCTTTGACAAAGCTTCATAGACAAACCAAAGCTGTATTGACGCTGCATATTTATAAGTTTGACCTATTAGAAACTCTTGAGAAAGTAATTATGGGTAGAGTGTTTTAGACATCAGATTTATTGTTATCATTATGTATGTAGTGCTCCGACATGCTCGAAATCTGAAGGCATATGCTACATTATTCAAATTCTATTAGCTTTTCATTGCATCCTCTTTTATGATATCATCTCATATCAACTCATTTGCCACAAATACAATCCTAAAGGGGTTGTTTGGTTGACATGGAAATTTAATTCCCATAGTAAGTTAGAGCAACTCCAATGGTGAGTTACAAGATGTTGTGGCTAAGTTTGCCACATCAAATTTCTAACTACGATTGATTGAAAC

mRNA sequence

TTGTTAAAAGTTGCTAAACTACCAATAACATGCTTCATCTTCTGAAAAGGCATATGTCCTACTCTAAGGTGCCTAACCTCTGCTTATGATTTATTTGAAGATGCTGCTGCAAGACATGTTGTTGCTGGTGGTTTGATTACTTCATCTTGGCTTGGATTGACACTGTAAAGTCCAGATCTCACACTACCAAGAACCTGTGGCCTTTTCATTAAATGGCCCCGAATATAACATTTGTCAGCAGTGAATGAGAGAATGCATTGATGATCTGAACACAATTTGTTTTCATACAACAGATTGTAGTGGAACTCAGCCAAAGAAGCAGCGAGCATTTCACATTCTCTGACAAACTCCCCCGAGTTAGGAGCCCGGTTTACCCACTCAACTCGAAATGTCTTCCTTCCCTAACTCGTATGACGAACTCGGCCCTGACTCAAACCCCGCCGAGTTAACTCACCCCTTCGACAACGACGATGACTACGTAACAGCAGGAGGCTACTCCAACTTCGCCGATTCCGAGTCGGTCAAGGAATCGGCTGATGAATCGGTGGTTTTTAACGGTAACAGCGACGACATTTTCGGATCCAATGATGTTCCGGCGGGCAGTGGAGCTTTCTCCGAATCGGATGGCCCGATGTTGCCGCCTCCTTCGGAAATGCAGGAGGAAGGGTTTGCTCTTCGCGAATGGCGGAGGCAAAATGCTGTTCGACTGGAAGAGAAGGAGAAAAGAGAGAAAGAAACACTGAGCCAGATCCTCGAGGAAGCAAATGAGTACAAAGTTGCCTTCCATGAGAAGAGAAAGGTTACATGTGAGAACAATAAAAGCAACAACAGAGAGAAGGAGGAGTTATTTCTGGCCAACCATGAAAAGTTCCACAAAGAGGCTGACAAGAACTACTGGAAGACAATTGCAGAGCTAATTCCTAACGAAGTTCCTGCAATAGTTCAGAAAAGAGGGAAGAAAGAACAGGAAAAGAAGCCTTCTGTTGCTGTGATTCAAGGACCAAAGCCTGGGAAGCCAACTGATCTTGCAAGGATGAGACAGATACTAGTGAAGCTTAAACACACTACTCCTAAGCACCTACTACTTGATAATAAGAACAATGGCACCACTGAACCCCCCAAGACTGCAGCTGTTGAAACCGTACCAGAAGCTGTAGTCGCTGCGTGATTGGCTGATTTGGGTTCGTCTCTGTATTTATATCCGACGATATGATGGTCGAGCCTTGACAATATTGCTTTGACAAAGCTTCATAGACAAACCAAAGCTGTATTGACGCTGCATATTTATAAGTTTGACCTATTAGAAACTCTTGAGAAAGTAATTATGGGTAGAGTGTTTTAGACATCAGATTTATTGTTATCATTATGTATGTAGTGCTCCGACATGCTCGAAATCTGAAGGCATATGCTACATTATTCAAATTCTATTAGCTTTTCATTGCATCCTCTTTTATGATATCATCTCATATCAACTCATTTGCCACAAATACAATCCTAAAGGGGTTGTTTGGTTGACATGGAAATTTAATTCCCATAGTAAGTTAGAGCAACTCCAATGGTGAGTTACAAGATGTTGTGGCTAAGTTTGCCACATCAAATTTCTAACTACGATTGATTGAAAC

Coding sequence (CDS)

ATGTCTTCCTTCCCTAACTCGTATGACGAACTCGGCCCTGACTCAAACCCCGCCGAGTTAACTCACCCCTTCGACAACGACGATGACTACGTAACAGCAGGAGGCTACTCCAACTTCGCCGATTCCGAGTCGGTCAAGGAATCGGCTGATGAATCGGTGGTTTTTAACGGTAACAGCGACGACATTTTCGGATCCAATGATGTTCCGGCGGGCAGTGGAGCTTTCTCCGAATCGGATGGCCCGATGTTGCCGCCTCCTTCGGAAATGCAGGAGGAAGGGTTTGCTCTTCGCGAATGGCGGAGGCAAAATGCTGTTCGACTGGAAGAGAAGGAGAAAAGAGAGAAAGAAACACTGAGCCAGATCCTCGAGGAAGCAAATGAGTACAAAGTTGCCTTCCATGAGAAGAGAAAGGTTACATGTGAGAACAATAAAAGCAACAACAGAGAGAAGGAGGAGTTATTTCTGGCCAACCATGAAAAGTTCCACAAAGAGGCTGACAAGAACTACTGGAAGACAATTGCAGAGCTAATTCCTAACGAAGTTCCTGCAATAGTTCAGAAAAGAGGGAAGAAAGAACAGGAAAAGAAGCCTTCTGTTGCTGTGATTCAAGGACCAAAGCCTGGGAAGCCAACTGATCTTGCAAGGATGAGACAGATACTAGTGAAGCTTAAACACACTACTCCTAAGCACCTACTACTTGATAATAAGAACAATGGCACCACTGAACCCCCCAAGACTGCAGCTGTTGAAACCGTACCAGAAGCTGTAGTCGCTGCGTGA

Protein sequence

MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGTTEPPKTAAVETVPEAVVAA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25367.1	Spo25367.1	mRNA

Homology

[Close]

BLAST of Spo25367.1 vs. NCBI nr
Match: gi|902213573|gb|KNA17296.1| (hypothetical protein SOVF_081160 [Spinacia oleracea])

HSP 1 Score: 500.4 bits (1287), Expect = 1.900e-138
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60
           MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD
Sbjct: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60

Query: 61  DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ 120
           DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ
Sbjct: 61  DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ 120

Query: 121 ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE 180
           ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE
Sbjct: 121 ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE 180

Query: 181 VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT 240
           VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT
Sbjct: 181 VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT 240

Query: 241 TEPPKTAAVETVPEAVVAA 260
           TEPPKTAAVETVPEAVVAA
Sbjct: 241 TEPPKTAAVETVPEAVVAA 259

[Close]

BLAST of Spo25367.1 vs. NCBI nr
Match: gi|731315084|ref|XP_010689833.1| (PREDICTED: clathrin light chain 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 360.5 bits (924), Expect = 2.400e-96
Identity = 199/267 (74.53%), Postives = 221/267 (82.77%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDD-YVTAGGYSNFADSESVKESA-DESVVFNGN 60
           MSSFP+S+DELGPDS+    THPFD+DD+ YV  GGYSNFADS+SV+ES  ++S  FN N
Sbjct: 1   MSSFPDSFDELGPDSHSVAQTHPFDDDDNGYVAEGGYSNFADSDSVRESQLEDSDFFNNN 60

Query: 61  SDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETL 120
               FGSN +P  +  F ESDG +LPPP EMQEEGFALREWRRQNAVRLEEKEK+EKE L
Sbjct: 61  GG--FGSNGIPLDNDVFVESDGAILPPPDEMQEEGFALREWRRQNAVRLEEKEKKEKEIL 120

Query: 121 SQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIP 180
           SQI+EEAN+YKVAFHEKRKVTCENN SNNREKE+ F+ANHEKFHKEADKNYWKTIAELIP
Sbjct: 121 SQIIEEANDYKVAFHEKRKVTCENNISNNREKEKFFMANHEKFHKEADKNYWKTIAELIP 180

Query: 181 NEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLL----- 240
           NEVP I +KRGKKEQEKKPS+AVIQGPKPGKPTDLARMRQILVKLKH TP HL L     
Sbjct: 181 NEVPTIEKKRGKKEQEKKPSIAVIQGPKPGKPTDLARMRQILVKLKHNTPIHLKLASPPA 240

Query: 241 DNKNNGTT-EPPKTAAVETVPEAVVAA 260
           D K +GTT E  +TAAV   P+AV AA
Sbjct: 241 DAKTDGTTPEASQTAAVAVTPQAVAAA 265

[Close]

BLAST of Spo25367.1 vs. NCBI nr
Match: gi|596014863|ref|XP_007218758.1| (hypothetical protein PRUPE_ppa009427mg [Prunus persica])

HSP 1 Score: 273.9 bits (699), Expect = 3.000e-70
Identity = 164/299 (54.85%), Postives = 205/299 (68.56%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGY--------------SNFADSESVK 60
           M+SF    D+  P +     T PFD DD Y+   GY              +NFADSESVK
Sbjct: 1   MASFTQPEDDSVPTTGS---TRPFD-DDGYL---GYDPRLPSVRFDSFVATNFADSESVK 60

Query: 61  ESADESVVFNGNS-DDIFGSNDVPAG---------------SGAFSESDGPMLPPPSEM- 120
           +SA +S +F+G++ +D + +     G                G F ES+ P+LPPPS+M 
Sbjct: 61  DSATDSPLFHGSAVEDAYAAQQATEGLSPPSIYPESNGQGFDGGFGESNDPILPPPSDML 120

Query: 121 QEEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVAFHEKRKVTCENNKSNNRE 180
            EEGFALREWRRQNA+ LEEKEKREKE L+QI+EEANE+K+ F++KRK+TCENNK+ NRE
Sbjct: 121 PEEGFALREWRRQNAIELEEKEKREKELLNQIIEEANEFKIDFYQKRKITCENNKAANRE 180

Query: 181 KEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGK 240
           +E+LFLA+ EKFH E DKNYWK +A+LIPNEVPAI +KRGKK+QEKKPS+ V+QGPKPGK
Sbjct: 181 REKLFLASQEKFHAEVDKNYWKAVADLIPNEVPAIEKKRGKKDQEKKPSIIVVQGPKPGK 240

Query: 241 PTDLARMRQILVKLKHTTPKHL---------LLDNKNNGTTEPPKTAAVETVPEAVVAA 260
           PT+L+RMRQIL+KLKH TP HL           D K + ++ PPK AAV   PEAVVAA
Sbjct: 241 PTELSRMRQILLKLKHNTPPHLKPTPPAPAPANDAKPSSSSAPPKAAAVAAAPEAVVAA 292

[Close]

BLAST of Spo25367.1 vs. NCBI nr
Match: gi|720002105|ref|XP_010256575.1| (PREDICTED: clathrin light chain 2-like [Nelumbo nucifera])

HSP 1 Score: 273.5 bits (698), Expect = 3.900e-70
Identity = 165/306 (53.92%), Postives = 202/306 (66.01%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYV---------TAGGYSNFADSESVKESADE 60
           MSSF +++ + G +  P   T PFD DD Y+             +SNFAD+ESVKES D+
Sbjct: 1   MSSFTDAFGQDGDEPRPVSSTRPFD-DDGYIGYDPRLPSQRFDAFSNFADNESVKESVDD 60

Query: 61  -SVVFN----GNSDDIFGSNDVP--------AGSG---------------AFSESDGPML 120
            S +FN    G  DD+F S  +P         G G                F+ SDGP+L
Sbjct: 61  SSPIFNNPSYGAGDDVFTSQPIPETPSPIYGTGGGFSAFSPESNGKAFDDGFAPSDGPIL 120

Query: 121 PPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVAFHEKRKVTCEN 180
           PP +EMQ EEGFALREW+RQNA+RLEEKEKREKE L+QI++EA+EYK+ F+ +R +  E 
Sbjct: 121 PPHTEMQPEEGFALREWKRQNAIRLEEKEKREKELLNQIIDEADEYKIEFYRRRVINVET 180

Query: 181 NKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKKEQEKKPSVAVI 240
           NK+ NREKE+LFLA+ EKFH EADK+YWK IAELIP+EVPAI +KRGKK+QEKKPS+ VI
Sbjct: 181 NKTTNREKEKLFLASQEKFHAEADKHYWKAIAELIPHEVPAIEKKRGKKDQEKKPSIVVI 240

Query: 241 QGPKPGKPTDLARMRQILVKLKHTTPKHLL---------LDNKNNGTTEPPKTAAVETVP 260
           QGPKPGKPTDL+RMRQILVKLKH  P H+            +   GT  PPK A V T P
Sbjct: 241 QGPKPGKPTDLSRMRQILVKLKHNPPPHMKPSPPPAPGPAKDAKTGTAAPPKAATVTTAP 300

[Close]

BLAST of Spo25367.1 vs. NCBI nr
Match: gi|823252426|ref|XP_012458828.1| (PREDICTED: clathrin light chain 2 [Gossypium raimondii])

HSP 1 Score: 273.1 bits (697), Expect = 5.000e-70
Identity = 158/277 (57.04%), Postives = 195/277 (70.40%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60
           MS+FP+S+ +L  DS  +  + P   +D      GY+ +  S+     AD S    G+SD
Sbjct: 1   MSTFPDSFTQLADDSLDSFDSVPHQEED----GAGYAGYDPSQQFDSFADHSDHAKGSSD 60

Query: 61  DIFGSNDVPAGSGA---FSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKE 120
           D+F S+    G G    F  SDGP+LPPP+EM+ EEG ALREWRR+NA+RLEEKEKREKE
Sbjct: 61  DVFASDSYTNGVGFGQDFGGSDGPVLPPPAEMEPEEGVALREWRRENAIRLEEKEKREKE 120

Query: 121 TLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAEL 180
            LSQI+EEA++YKV F++KR+VTCENNK+NNR+KE++F+ANHEKFH EADK+YWK IAEL
Sbjct: 121 LLSQIIEEADQYKVEFYKKREVTCENNKANNRDKEKIFVANHEKFHAEADKHYWKAIAEL 180

Query: 181 IPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLL---- 240
           IPNEVP I +KRGKKE+EKKPS+ V+QGPKPGKPTD +RMRQILVKLKH TP HL     
Sbjct: 181 IPNEVPTI-EKRGKKEKEKKPSIVVVQGPKPGKPTDRSRMRQILVKLKHNTPSHLKHSPP 240

Query: 241 ----------LDNKNNGTTEPPKTAAVETVPEAVVAA 260
                      D K   T+  P    V + PEAVVAA
Sbjct: 241 PPPAAAAAKDQDAKTGNTSSVPAALPVTSTPEAVVAA 272

[Close]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081160 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.400e-138
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60
           MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD
Sbjct: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60

Query: 61  DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ 120
           DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ
Sbjct: 61  DIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETLSQ 120

Query: 121 ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE 180
           ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE
Sbjct: 121 ILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNE 180

Query: 181 VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT 240
           VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT
Sbjct: 181 VPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLDNKNNGT 240

Query: 241 TEPPKTAAVETVPEAVVAA 260
           TEPPKTAAVETVPEAVVAA
Sbjct: 241 TEPPKTAAVETVPEAVVAA 259

[Close]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1S8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g023970 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.700e-96
Identity = 199/267 (74.53%), Postives = 221/267 (82.77%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDD-YVTAGGYSNFADSESVKESA-DESVVFNGN 60
           MSSFP+S+DELGPDS+    THPFD+DD+ YV  GGYSNFADS+SV+ES  ++S  FN N
Sbjct: 1   MSSFPDSFDELGPDSHSVAQTHPFDDDDNGYVAEGGYSNFADSDSVRESQLEDSDFFNNN 60

Query: 61  SDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREKETL 120
               FGSN +P  +  F ESDG +LPPP EMQEEGFALREWRRQNAVRLEEKEK+EKE L
Sbjct: 61  GG--FGSNGIPLDNDVFVESDGAILPPPDEMQEEGFALREWRRQNAVRLEEKEKKEKEIL 120

Query: 121 SQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIP 180
           SQI+EEAN+YKVAFHEKRKVTCENN SNNREKE+ F+ANHEKFHKEADKNYWKTIAELIP
Sbjct: 121 SQIIEEANDYKVAFHEKRKVTCENNISNNREKEKFFMANHEKFHKEADKNYWKTIAELIP 180

Query: 181 NEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLL----- 240
           NEVP I +KRGKKEQEKKPS+AVIQGPKPGKPTDLARMRQILVKLKH TP HL L     
Sbjct: 181 NEVPTIEKKRGKKEQEKKPSIAVIQGPKPGKPTDLARMRQILVKLKHNTPIHLKLASPPA 240

Query: 241 DNKNNGTT-EPPKTAAVETVPEAVVAA 260
           D K +GTT E  +TAAV   P+AV AA
Sbjct: 241 DAKTDGTTPEASQTAAVAVTPQAVAAA 265

[Close]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Match: M5X1K3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009427mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.100e-70
Identity = 164/299 (54.85%), Postives = 205/299 (68.56%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGY--------------SNFADSESVK 60
           M+SF    D+  P +     T PFD DD Y+   GY              +NFADSESVK
Sbjct: 1   MASFTQPEDDSVPTTGS---TRPFD-DDGYL---GYDPRLPSVRFDSFVATNFADSESVK 60

Query: 61  ESADESVVFNGNS-DDIFGSNDVPAG---------------SGAFSESDGPMLPPPSEM- 120
           +SA +S +F+G++ +D + +     G                G F ES+ P+LPPPS+M 
Sbjct: 61  DSATDSPLFHGSAVEDAYAAQQATEGLSPPSIYPESNGQGFDGGFGESNDPILPPPSDML 120

Query: 121 QEEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVAFHEKRKVTCENNKSNNRE 180
            EEGFALREWRRQNA+ LEEKEKREKE L+QI+EEANE+K+ F++KRK+TCENNK+ NRE
Sbjct: 121 PEEGFALREWRRQNAIELEEKEKREKELLNQIIEEANEFKIDFYQKRKITCENNKAANRE 180

Query: 181 KEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGK 240
           +E+LFLA+ EKFH E DKNYWK +A+LIPNEVPAI +KRGKK+QEKKPS+ V+QGPKPGK
Sbjct: 181 REKLFLASQEKFHAEVDKNYWKAVADLIPNEVPAIEKKRGKKDQEKKPSIIVVQGPKPGK 240

Query: 241 PTDLARMRQILVKLKHTTPKHL---------LLDNKNNGTTEPPKTAAVETVPEAVVAA 260
           PT+L+RMRQIL+KLKH TP HL           D K + ++ PPK AAV   PEAVVAA
Sbjct: 241 PTELSRMRQILLKLKHNTPPHLKPTPPAPAPANDAKPSSSSAPPKAAAVAAAPEAVVAA 292

[Close]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RZE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G076300 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.500e-70
Identity = 158/277 (57.04%), Postives = 195/277 (70.40%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60
           MS+FP+S+ +L  DS  +  + P   +D      GY+ +  S+     AD S    G+SD
Sbjct: 1   MSTFPDSFTQLADDSLDSFDSVPHQEED----GAGYAGYDPSQQFDSFADHSDHAKGSSD 60

Query: 61  DIFGSNDVPAGSGA---FSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKE 120
           D+F S+    G G    F  SDGP+LPPP+EM+ EEG ALREWRR+NA+RLEEKEKREKE
Sbjct: 61  DVFASDSYTNGVGFGQDFGGSDGPVLPPPAEMEPEEGVALREWRRENAIRLEEKEKREKE 120

Query: 121 TLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAEL 180
            LSQI+EEA++YKV F++KR+VTCENNK+NNR+KE++F+ANHEKFH EADK+YWK IAEL
Sbjct: 121 LLSQIIEEADQYKVEFYKKREVTCENNKANNRDKEKIFVANHEKFHAEADKHYWKAIAEL 180

Query: 181 IPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLL---- 240
           IPNEVP I +KRGKKE+EKKPS+ V+QGPKPGKPTD +RMRQILVKLKH TP HL     
Sbjct: 181 IPNEVPTI-EKRGKKEKEKKPSIVVVQGPKPGKPTDRSRMRQILVKLKHNTPSHLKHSPP 240

Query: 241 ----------LDNKNNGTTEPPKTAAVETVPEAVVAA 260
                      D K   T+  P    V + PEAVVAA
Sbjct: 241 PPPAAAAAKDQDAKTGNTSSVPAALPVTSTPEAVVAA 272

[Close]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MKZ3_GOSAR (Clathrin light chain 2-like protein OS=Gossypium arboreum GN=F383_17758 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.800e-67
Identity = 152/277 (54.87%), Postives = 194/277 (70.04%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSD 60
           MS+FP+S+ +L  DS  +  + P  ++D      GY+ +  S+     AD S    G++D
Sbjct: 1   MSTFPDSFTQLADDSLDSFDSVPHQDED----GAGYAGYDPSQQFDSFADHSDHAKGSTD 60

Query: 61  DIFGSNDVPAGSGA---FSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKE 120
           D+F S+    G G    F  SDGP+LPPP+E++ EEG ALREWRR+NA+RLEEK+KREKE
Sbjct: 61  DVFASDSYTNGVGFGQDFGGSDGPVLPPPAEIEPEEGVALREWRRENAIRLEEKDKREKE 120

Query: 121 TLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAEL 180
            LSQI+EEA++YKV F++KR+VTCENNK+NNR+KE++F+ANHEKFH EADKNYWK IAEL
Sbjct: 121 LLSQIIEEADQYKVEFYKKREVTCENNKANNRDKEKIFVANHEKFHAEADKNYWKAIAEL 180

Query: 181 IPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLL---- 240
           IPNEVP I ++R  K++EKKPS+ V+QGPKPGKPTD +RMRQILVKLKH TP HL     
Sbjct: 181 IPNEVPTIEKRR--KKEEKKPSIVVVQGPKPGKPTDRSRMRQILVKLKHNTPSHLKHSPP 240

Query: 241 ----------LDNKNNGTTEPPKTAAVETVPEAVVAA 260
                      D K   T+  P    V + PEAVVAA
Sbjct: 241 PPPAAAAAKDQDAKTGNTSSVPAALPVTSTPEAVVAA 271

[Close]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Match: CLC2_ARATH (Clathrin light chain 2 OS=Arabidopsis thaliana GN=CLC2 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.300e-59
Identity = 144/267 (53.93%), Postives = 177/267 (66.29%), Query Frame = 1


		  
Query: 1   MSSFPN-SYDELGPD-SNPAELTHPFDNDDDYVTAGGYSNFADS-ESVKESADESVVFNG 60
           MS+F + S+  L  D S    ++  FD  D +    G     DS + V  +         
Sbjct: 1   MSAFEDDSFVILNDDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPSSDYGAYS 60

Query: 61  NSDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKE 120
           N D IFGSN          + DGP+LPPPSEM+ +EGFALREWRRQNA++LEEKEKREKE
Sbjct: 61  NGDGIFGSN---------GDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKE 120

Query: 121 TLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAEL 180
            L QI+EEA++YK  FH+K +VTCENNK+ NREKE+L+L N EKF+ E+ KNYWK IAEL
Sbjct: 121 LLKQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAEL 180

Query: 181 IPNEVPAIVQKRGKKEQE--KKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLD 240
           +P EVP I ++RGKKEQ+  KKP+V+VIQGPKPGKPTDL RMRQILVKLKH  P HL L 
Sbjct: 181 VPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLT 240

Query: 241 NK--NNGTTEPPKTAAVETVPEAVVAA 260
           ++  +     PPK        EAV AA
Sbjct: 241 SQPPSEEAAAPPKNVPETKPTEAVTAA 258

[Close]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Match: CLC1_ORYSJ (Clathrin light chain 1 OS=Oryza sativa subsp. japonica GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.100e-56
Identity = 138/281 (49.11%), Postives = 176/281 (62.63%), Query Frame = 1


		  
Query: 1   MSSFPNSYDELGPDSNPAELTHPFDNDDDYVTA------------GGYSNFADS--ESVK 60
           M+SF   + + G D  P   +HPFD DDD                GGY++F D   E V+
Sbjct: 1   MASF---FADDGADELPRTASHPFDADDDAAPDASGGAAADDTGYGGYASFVDGGVEDVE 60

Query: 61  ESADESVVFNGNSDDIFGSNDVPAG--SGAFSES-----------DGPMLPPPSEM-QEE 120
           E  +E  V          S  VP G  SG FS S           DGP+LPPP++M  EE
Sbjct: 61  EEEEEIAV---------ESEGVPIGHVSGGFSPSPFSPDPELDGGDGPILPPPAQMGAEE 120

Query: 121 GFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEE 180
           G  LREWRRQNA+ LEEKE++EKE  +QIL EA E+K AF+EKR   CE NK +NRE+E+
Sbjct: 121 GILLREWRRQNAIVLEEKERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREK 180

Query: 181 LFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTD 240
           +F+A  EKFH EADK YWK+I+ELIP+E+ A ++KRGKK+++KKPS+ VIQGPKPGKPTD
Sbjct: 181 IFVAGQEKFHAEADKQYWKSISELIPHEI-ATIEKRGKKDKDKKPSITVIQGPKPGKPTD 240

Query: 241 LARMRQILVKLKHTTPKHLLLDNKNNGTTEPPKTAAVETVP 254
           L+RMRQILVKLKH  P H++     +   +  K  A +  P
Sbjct: 241 LSRMRQILVKLKHAPPPHMMQPPPASAAKDGAKDGAKDGTP 268

[Close]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Match: CLC1_ARATH (Clathrin light chain 1 OS=Arabidopsis thaliana GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.100e-51
Identity = 120/237 (50.63%), Postives = 155/237 (65.40%), Query Frame = 1


		  
Query: 5   PNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKE---------SADESVVF 64
           P+ +++ G   N +E   P         +GG+S+F    +            + D S  F
Sbjct: 16  PSEHEDFGGYDNFSEAQQPPTQHQ----SGGFSSFNGDPASPNGYGFGASSPNHDFSSPF 75

Query: 65  NGNSDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREK 124
             + +D  G+     G   F+ SDGP+LP P+EM+EEGF  REWRR N + LEEKEK+EK
Sbjct: 76  ESSVNDANGNGGGSGGDAIFA-SDGPILPDPNEMREEGFQRREWRRLNTIHLEEKEKKEK 135

Query: 125 ETLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAE 184
           E  +QI+ EA ++K AF+EKR  T E NK++NREKE+L+ AN EKFHKE DK+YWK IAE
Sbjct: 136 EMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKEVDKHYWKAIAE 195

Query: 185 LIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLL 233
           LIP EVP I +KRGKK+ +KKPSV VIQGPKPGKPTDL RMRQI +KLK   P H++
Sbjct: 196 LIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKTNPPPHMM 247

[Close]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Match: CLC2_ORYSJ (Clathrin light chain 2 OS=Oryza sativa subsp. japonica GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.100e-46
Identity = 113/231 (48.92%), Postives = 153/231 (66.23%), Query Frame = 1


		  
Query: 13  PDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKESADESVVFNGNSDDIFGSNDVPAGS 72
           P ++PA    PFD DD ++     +           + E   F  ++   FG   +P  +
Sbjct: 8   PTASPA--ASPFD-DDSFLRFDAAAPAPAPADAFPPSPEPYAFRPDAPSPFG---MPEAN 67

Query: 73  GAFSES--------DGPMLPPPSEM-QEEGFALREWRRQNAVRLEEKEKREKETLSQILE 132
           G+  +         +GP+LPPP++M  +EGF LREWRRQNA+ LEEKEK+EKE  +QI+ 
Sbjct: 68  GSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAILLEEKEKKEKEMRNQIIL 127

Query: 133 EANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNEVPA 192
           +A E+K AF EKRK+  E +K  NRE+E+L+LAN EKFH  ADK YWK I+ELIP+E+ A
Sbjct: 128 DAKEFKKAFVEKRKLNVETSKDQNREREKLYLANQEKFHAGADKQYWKAISELIPHEI-A 187

Query: 193 IVQKRG---KKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHL 232
            ++KRG    K++EKKP + VIQGPKPGKPTD++RMRQIL+KLKHT P H+
Sbjct: 188 NIEKRGAKKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQILLKLKHTPPPHM 231

[Close]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Match: CLC3_ARATH (Clathrin light chain 3 OS=Arabidopsis thaliana GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.100e-45
Identity = 113/220 (51.36%), Postives = 138/220 (62.73%), Query Frame = 1


		  
Query: 26  NDDDYVTAGGYSNFADSESVKESADESVVFNGNSDDIFGSNDVPAGSGA----------- 85
           N    V  G   NF   ES  +S      F+         +D+P G  +           
Sbjct: 16  NRSTEVDGGDGGNFTAYESRFQSQRFDSSFSNFDSQPEKESDLPCGDSSPRPETQSPPSI 75

Query: 86  --FSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVA 145
             F +++  +LPPPS M+ EEGFALREWRR NA+RLEEKEK EKE + QILE A +YK  
Sbjct: 76  NSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAE 135

Query: 146 FHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKK 205
           F+ KR VT ENNK  NREKE+ FL N EKF+ EADKN WK IAELIP EVP +++ RG K
Sbjct: 136 FYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVP-VIENRGNK 195

Query: 206 EQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHL 232
             +K  ++ VIQGPKPGKPTDL+RMRQ+L KLKH  P H+
Sbjct: 196 --KKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHM 232

[Close]

BLAST of Spo25367.1 vs. TAIR (Arabidopsis)
Match: AT2G40060.1 (Clathrin light chain protein)

HSP 1 Score: 230.3 bits (586), Expect = 1.300e-60
Identity = 144/267 (53.93%), Postives = 177/267 (66.29%), Query Frame = 1


		  
Query: 1   MSSFPN-SYDELGPD-SNPAELTHPFDNDDDYVTAGGYSNFADS-ESVKESADESVVFNG 60
           MS+F + S+  L  D S    ++  FD  D +    G     DS + V  +         
Sbjct: 1   MSAFEDDSFVILNDDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPSSDYGAYS 60

Query: 61  NSDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKE 120
           N D IFGSN          + DGP+LPPPSEM+ +EGFALREWRRQNA++LEEKEKREKE
Sbjct: 61  NGDGIFGSN---------GDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKE 120

Query: 121 TLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAEL 180
            L QI+EEA++YK  FH+K +VTCENNK+ NREKE+L+L N EKF+ E+ KNYWK IAEL
Sbjct: 121 LLKQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAEL 180

Query: 181 IPNEVPAIVQKRGKKEQE--KKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLLLD 240
           +P EVP I ++RGKKEQ+  KKP+V+VIQGPKPGKPTDL RMRQILVKLKH  P HL L 
Sbjct: 181 VPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLT 240

Query: 241 NK--NNGTTEPPKTAAVETVPEAVVAA 260
           ++  +     PPK        EAV AA
Sbjct: 241 SQPPSEEAAAPPKNVPETKPTEAVTAA 258

[Close]

BLAST of Spo25367.1 vs. TAIR (Arabidopsis)
Match: AT2G20760.1 (Clathrin light chain protein)

HSP 1 Score: 204.9 bits (520), Expect = 5.900e-53
Identity = 120/237 (50.63%), Postives = 155/237 (65.40%), Query Frame = 1


		  
Query: 5   PNSYDELGPDSNPAELTHPFDNDDDYVTAGGYSNFADSESVKE---------SADESVVF 64
           P+ +++ G   N +E   P         +GG+S+F    +            + D S  F
Sbjct: 16  PSEHEDFGGYDNFSEAQQPPTQHQ----SGGFSSFNGDPASPNGYGFGASSPNHDFSSPF 75

Query: 65  NGNSDDIFGSNDVPAGSGAFSESDGPMLPPPSEMQEEGFALREWRRQNAVRLEEKEKREK 124
             + +D  G+     G   F+ SDGP+LP P+EM+EEGF  REWRR N + LEEKEK+EK
Sbjct: 76  ESSVNDANGNGGGSGGDAIFA-SDGPILPDPNEMREEGFQRREWRRLNTIHLEEKEKKEK 135

Query: 125 ETLSQILEEANEYKVAFHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAE 184
           E  +QI+ EA ++K AF+EKR  T E NK++NREKE+L+ AN EKFHKE DK+YWK IAE
Sbjct: 136 EMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKEVDKHYWKAIAE 195

Query: 185 LIPNEVPAIVQKRGKKEQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHLL 233
           LIP EVP I +KRGKK+ +KKPSV VIQGPKPGKPTDL RMRQI +KLK   P H++
Sbjct: 196 LIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKTNPPPHMM 247

[Close]

BLAST of Spo25367.1 vs. TAIR (Arabidopsis)
Match: AT3G51890.1 (Clathrin light chain protein)

HSP 1 Score: 184.9 bits (468), Expect = 6.400e-47
Identity = 113/220 (51.36%), Postives = 138/220 (62.73%), Query Frame = 1


		  
Query: 26  NDDDYVTAGGYSNFADSESVKESADESVVFNGNSDDIFGSNDVPAGSGA----------- 85
           N    V  G   NF   ES  +S      F+         +D+P G  +           
Sbjct: 16  NRSTEVDGGDGGNFTAYESRFQSQRFDSSFSNFDSQPEKESDLPCGDSSPRPETQSPPSI 75

Query: 86  --FSESDGPMLPPPSEMQ-EEGFALREWRRQNAVRLEEKEKREKETLSQILEEANEYKVA 145
             F +++  +LPPPS M+ EEGFALREWRR NA+RLEEKEK EKE + QILE A +YK  
Sbjct: 76  NSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAE 135

Query: 146 FHEKRKVTCENNKSNNREKEELFLANHEKFHKEADKNYWKTIAELIPNEVPAIVQKRGKK 205
           F+ KR VT ENNK  NREKE+ FL N EKF+ EADKN WK IAELIP EVP +++ RG K
Sbjct: 136 FYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVP-VIENRGNK 195

Query: 206 EQEKKPSVAVIQGPKPGKPTDLARMRQILVKLKHTTPKHL 232
             +K  ++ VIQGPKPGKPTDL+RMRQ+L KLKH  P H+
Sbjct: 196 --KKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHM 232

The following BLAST results are available for this feature:

BLAST of Spo25367.1 vs. NCBI nr
BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
BLAST of Spo25367.1 vs. TAIR (Arabidopsis)

BLAST of Spo25367.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902213573\|gb\|KNA17296.1\|	1.9e-138	100.	hypothetical protein SOVF_0811...	[more]
gi\|731315084\|ref\|XP_010689833.1\|	2.4e-96	74.5	PREDICTED: clathrin light chai...	[more]
gi\|596014863\|ref\|XP_007218758.1\|	3.0e-70	54.8	hypothetical protein PRUPE_ppa...	[more]
gi\|720002105\|ref\|XP_010256575.1\|	3.9e-70	53.9	PREDICTED: clathrin light chai...	[more]
gi\|823252426\|ref\|XP_012458828.1\|	5.0e-70	57.0	PREDICTED: clathrin light chai...	[more]

BLAST of Spo25367.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RCR1_SPIOL	1.4e-138	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D1S8_BETVU	1.7e-96	74.5	Uncharacterized protein OS=Bet...	[more]
M5X1K3_PRUPE	2.1e-70	54.8	Uncharacterized protein OS=Pru...	[more]
A0A0D2RZE3_GOSRA	3.5e-70	57.0	Uncharacterized protein OS=Gos...	[more]
A0A0B0MKZ3_GOSAR	2.8e-67	54.8	Clathrin light chain 2-like pr...	[more]

BLAST of Spo25367.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CLC2_ARATH	2.3e-59	53.9	Clathrin light chain 2 OS=Arab...	[more]
CLC1_ORYSJ	4.1e-56	49.1	Clathrin light chain 1 OS=Oryz...	[more]
CLC1_ARATH	1.1e-51	50.6	Clathrin light chain 1 OS=Arab...	[more]
CLC2_ORYSJ	5.1e-46	48.9	Clathrin light chain 2 OS=Oryz...	[more]
CLC3_ARATH	1.1e-45	51.3	Clathrin light chain 3 OS=Arab...	[more]

BLAST of Spo25367.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G40060.1	1.3e-60	53.9	Clathrin light chain protein	[more]
AT2G20760.1	5.9e-53	50.6	Clathrin light chain protein	[more]
AT3G51890.1	6.4e-47	51.3	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 16..231 score: 1.7E
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 39..226 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 104..128 scor
None	No IPR available	PANTHER	PTHR10639:SF10	CLATHRIN LIGHT CHAIN 2	coord: 16..231 score: 1.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0006378	mRNA polyadenylation
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008250	oligosaccharyltransferase complex
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005849	mRNA cleavage factor complex
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003729	mRNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16835	0.68	Barchart \| Table
Spo23298	0.67	Barchart \| Table
Spo12877	0.66	Barchart \| Table
Spo24416	0.66	Barchart \| Table