Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATGACTTGTATCACTGTCCAACTGTAGATAGACCAGCAAAGGTGTGGAGGAGAGAGAAAAATCGAAAGCATTCGAAATGCAGTTGAGCGAAAATGAGGGAATCGAAGGGAAGACGATGGTGGTGACTGGTGGTTTGGGCTACTTGGGTGCTTCTCTCTGCCTCGAGCTTCTCCGACGAGGTGCTCGCCAGGTCCGATCCCTCGACCTCCGTTCAGTTTCACCTTGGTCCTCTCAACTCTCTCTCAATCCTGCCTTTCTTCACGTCCGAGGTACTCAATTCCCATTCAATTTCCATCCTTTTTCTCTAATTCTACTACAGATCATCATTCATTTTTTAATCATTGCTCAAACCAGAAGGTAATCTATGATTAGTGGGATTCGTATATTGTAATTAGTGCTAATCTAGATGAGTGAGAAGGTATTCTGCAATTCATTATTCTTACCTATTTTGATCCAAATCCCAATATAATCGCCTTTTTAAGTAATGCGTTATTCATGCTTAGATTTTGAAGTTTTTTCGTTTTAGTTATTGTATTGGTTTTTGACTAAACTGACAACGATGCTGCATTGAAATTTTAGATTAACATAATAATAGCGCACTATTTGTGTTAGTGTATGGAGTGAAATTGCGCGAAACTGATAAAATGAGCAAAAAAAAAAAACACACACCCTTTTAGTGTACTCGGGGACAAGATATCTTTTGTAGTTAAAGGTTGTTGAATGGAAAAAAGTCATTTTAACCTTGGGTACACCAAGGCACGTTGTGAGTGGTGGATCTAAGAATTTCAGTTTGGAGGAACACTTAGCAATGAAAGAAAAACGAATTAGGCAAATCCAAAAACACAATGTGACTAATACTGTAGTACATGAAGTAAAGAAAAAAAAGAGGAAGGGTGAGGAATTGCTTGTAATAGGACTACAACCTAAAACCAAGTGGCTTGCTGCACGAAATTTCATTCTAAGGTTATGGTGTACCTAGTACTACCTAGCTCTAGGTGTACCCGTGAACAAACAGATTTTGTAAGTACTTCATAAGCATTTAACGTATTCCATTAGTAATTAGAAACATGCTAATGCTATGTTAGAAAATAGAAAATCTTGGTTTGATGGATGGGGTATCAGAAAAAGAAACAAAATAAAGAGATTGTTTTATGTTCCTTAGGGGACATTACGAGCCAAAAGGATGTCAAGAAGGCTCTAAAAGGGGCGGATTGCGTTTTCCATGTTGCTTCCTATGGCATGTCGGGTAAAGAAATGCTTCAAAATGGTCGTATTGACAATGTTAATATAAATGGAACCTGCCTTATACTGGATGCATGCATGGATTTTGGGATCAAGAGGCTTGTCTATGTGAGTACTTGCAATGTTGTTTTTGGGGGAAAAGAGATCATCAATGGGGATGAAACTCTGCCTTATCAACCTCCAGATTACCATGCTGATCCTTATGGCCGCAGCAAATCCATTGCTGAACAGCTAGTCCTGAAATATAATGGTCGCCCTTTCAGGTGAGAAACTTCTACCCTGCAGGTACAAAGATGCAGAATATTTGACCCTGTATGTTTTTCACTGGTCTATCACCTTTTGCTGCTCTTTATTGTGAACCAAAAAATCGCTTTTTTTTGTGTCAATGAAGGCTTTATTTGGATGAAATTTGCCTATCATCCCTGCAGTGTTGACGTTCAGTCTGTTTTCTTTCCACCTAATCTATGGCATATTCTCACCGTTACCCCAATACCTCTGAGGCTCTGACAAGGCACCTATCTTGGCTAGACACTTCACACTTGCAATCTTAACCGCATAAAAGAGACTCTTAGCCTTACACCTACCTCCATAAGTGCAATGAATTTTATTTATTGACACTTGATCCAAAAAGCAACTGACTATCCTATTACTTCGTATCAAGCAAGAAGTAAGCATGACTTTACAAGCCCATCGATTTAATCCATTGTAATCATAGTATCGGAAAGGGTTTTCAGATGGAGAAGACGAAGGGATCCTTGATTGTATATGATTACACCCCCCCCCCCCCCCCCCCCCCCCNCCCCCTCCGCCCAATCCTGCCACAAAGGAGAATAAAACAATTCTTTCTTGGATGAAGCCAGTAGCATAAACTTTTTTTTTGTATATTCTGTGTCCTTATTGCTTTAAACTTTGTAAGAAATAACTCAAGCTGAATTGAAGTTGAGCAAGTTAATAGTTGGTTAGTCATAGATTCTGGGAGTGATCTTTCTCTTAAGCTGGGATTTATATAAATGTTTGGTTTATTCAAGCAATTGATCAGTTAGTGGCAATGGACTTTTAATGCAATTGTGCTCTACATCTTATCCTTCTTTGTCATCCAGGGAGAAAAATGGTGAACATCTTTACACCTGTGCCATTCGTCCTGCTGGTATATATGGACCTGGTGAAGAGAGACACTTTCCACGGATAGTGAATTTTGCAAAGTTAGGTCTGGTGGTATTTAGAGTTGGTGATCCAACTATTAAATCAGACTGGGTTTATGTGGATAATCTTGTAGTGGCTCTTCTATTGGCAAGTATGGGGCTTTTAGATGATATTCCTGGGAGAGAGGGATGCCCTGTAGCAGCTGGACAGTCATACTTCATCTCTGACGGTAATTTGTATAACCTGTCTAGAAATGGTTCACTTGAAAGGTTTCTGCTGTTAAACCAGATATAATGCAACAAACCTTTTCTCCAAGTGAATCCTTCCTGCCAGTCATACTATTTCATTAGCGCTGCTTTTATAATAACACGGTCATGATAATTTGATTGTTCTTTTGCAGGGTGTCCAGTTAATTCTTTTGAGTTCGTCCGTCCTCTTTTGAGGAGCCTGGACTATGATCTACCAAACACCTCATTGAGTTTACCCTCGGCTCTTGTGGTTGGAAATATATTTTTGGTTGTCTATACCATTCTTTACCCATGGCTTAACAAATCATGGCTTCCACAACCATTGCTTCTTCCTGCTGAAGTATACAAGGTCTTTATTCTAATCTTACGTTCTTAACTTCCCTTCTTTTCCTTGAGAATTGTATCTTCATACTATGATTCAAGGTGTATTTTCAGTACTTGATGGTTAAAGCTTGACTTGGAAGATGTAAATGGAAATTAGGAGGGAGAATGTCCTTGTGTTTGACTTTTGAGACAATGTTTCACCTATCCAAAGAATATGACGGCATGCTATTGATAATCTGTTAACACTAAATATCAGAAAGTGTGTTCTCTAAACAATTACTGGTCAAGCAGAAAAAAAGATGTTGACAAGAAAGACAAAGCCATTTTCTTCTATAGACCTTTTTCTACGTATCAATATCCTTGTGTGAAATCACAGATCATATCAGTGCCTTATCACATTATCATAATTGATTTGCATATTCGTGTCCCATGACAGGTTGGTGTTACACATTATTTCTCGTTGCTAAAAGCCAAGAAGGAGCTGGGTTACATTCCAATGGTGAGCCCCGAAGAAGGCATGGCAGCAACGATTTCATACTGGAAAGATAGGAAGAAGAGAAGCCTAGATGGGCCTACGATATATGCATGGATATTCTGCGTGTTTGGAATGTCTGCTCTGATAAGTGTCGCCCTCTTTCCAGATTTCGGTCCTCTTTCACCCATAAAAACTCTGGCTCTCTTCTTTTATCAATCAATACGTAATATACGGATAATTAGCTTTTTAGCTGTAGGGGCACATGTTGCAGAGAGCATTTACGCATGGCACCTTGCCAAAAAAGTGGATCCTGCAAATGCAAAGGGTTGGTTTTTGCAGACTTTTGTTTTGGGGATCTTCTCGTTGCGTTTACTGTTGAAAAGGGCTCGAAACTAGCTAAGCCAGCTTCTATGCTCAAATTTTTAAAGCATGTTTGAGATTTCATATCATTTAGCGTGGACATACATATGATATTCAAGTAGTCAAGCACACTTGAAGGATGTTGCTTTGCTTGTGTTTCACTGTCTTTTGTAAACTTTCTTTCACTAGCTTGATTGATGGCACTTCCCGTTGTATACTTTTTGTTATGATCTCAAAGTACATGATGTAAAATGTAATTAGTATTGGGCTCGAGCGATACCTTGAGTTATTACAGGGATAACAATTATTCTGTTACATGGAATTGATAATTGATTTTTTTTATATTTTTTTTATTATTATTGTCGTTACCATTATTTCATGACCGAGCCGAAGGAGTAGGCTCAATATTACAAGGAGAAGACGTAATACTCTCCAAGTTCCCCAGCATAAAAGGTATTTCCAAAACCTCCAATACCTTCCTTTCTTGAACAAGATTTTGTTCTATAGATCTCTGTATTCTTGAGTTATAAAAAGTATCTCATTCATTCAGTTTGTTGATAAAAGTCGGATGATCAAACCTTGGTGACAAGATAGGCAAACAAGCAAAGATGCGGAAAAATACAGGAAATTTAAGGGAGGAGGAAGAAAGATGTTAATGATGACAACTTGACAAGAGAGGTTATTATCAAGGGAGATGGTTACCTTTCAATTCAAAACACAATTCGGGAACTCATCCTCCTACAATCTTTGCCCAAATTTCTCAGGCTGGAAATATATTGCTGTAACCTTTAACTCGTTTCTTACTGTTGCTGTAACCAAGAAGTGGAAGGTTTGAGCAACCTTTCACTCATTTCTTATTGTTGCTGTAACCAAGAAGTGGGAAGTTTATCAACTACTAGTAGTTGTGTAAGACAGCTTACATTTG GTATGACTTGTATCACTGTCCAACTGTAGATAGACCAGCAAAGGTGTGGAGGAGAGAGAAAAATCGAAAGCATTCGAAATGCAGTTGAGCGAAAATGAGGGAATCGAAGGGAAGACGATGGTGGTGACTGGTGGTTTGGGCTACTTGGGTGCTTCTCTCTGCCTCGAGCTTCTCCGACGAGGTGCTCGCCAGGTCCGATCCCTCGACCTCCGTTCAGTTTCACCTTGGTCCTCTCAACTCTCTCTCAATCCTGCCTTTCTTCACGTCCGAGGGGACATTACGAGCCAAAAGGATGTCAAGAAGGCTCTAAAAGGGGCGGATTGCGTTTTCCATGTTGCTTCCTATGGCATGTCGGGTAAAGAAATGCTTCAAAATGGTCGTATTGACAATGTTAATATAAATGGAACCTGCCTTATACTGGATGCATGCATGGATTTTGGGATCAAGAGGCTTGTCTATGTGAGTACTTGCAATGTTGTTTTTGGGGGAAAAGAGATCATCAATGGGGATGAAACTCTGCCTTATCAACCTCCAGATTACCATGCTGATCCTTATGGCCGCAGCAAATCCATTGCTGAACAGCTAGTCCTGAAATATAATGGTCGCCCTTTCAGGGAGAAAAATGGTGAACATCTTTACACCTGTGCCATTCGTCCTGCTGGTATATATGGACCTGGTGAAGAGAGACACTTTCCACGGATAGTGAATTTTGCAAAGTTAGGTCTGGTGGTATTTAGAGTTGGTGATCCAACTATTAAATCAGACTGGGTTTATGTGGATAATCTTGTAGTGGCTCTTCTATTGGCAAGTATGGGGCTTTTAGATGATATTCCTGGGAGAGAGGGATGCCCTGTAGCAGCTGGACAGTCATACTTCATCTCTGACGGGTGTCCAGTTAATTCTTTTGAGTTCGTCCGTCCTCTTTTGAGGAGCCTGGACTATGATCTACCAAACACCTCATTGAGTTTACCCTCGGCTCTTGTGGTTGGAAATATATTTTTGGTTGTCTATACCATTCTTTACCCATGGCTTAACAAATCATGGCTTCCACAACCATTGCTTCTTCCTGCTGAAGTATACAAGGTTGGTGTTACACATTATTTCTCGTTGCTAAAAGCCAAGAAGGAGCTGGGTTACATTCCAATGGTGAGCCCCGAAGAAGGCATGGCAGCAACGATTTCATACTGGAAAGATAGGAAGAAGAGAAGCCTAGATGGGCCTACGATATATGCATGGATATTCTGCGTGTTTGGAATGTCTGCTCTGATAAGTGTCGCCCTCTTTCCAGATTTCGGTCCTCTTTCACCCATAAAAACTCTGGCTCTCTTCTTTTATCAATCAATACGTAATATACGGATAATTAGCTTTTTAGCTGTAGGGGCACATGTTGCAGAGAGCATTTACGCATGGCACCTTGCCAAAAAAGTGGATCCTGCAAATGCAAAGGGTTGGTTTTTGCAGACTTTTGTTTTGGGGATCTTCTCGTTGCGTTTACTGTTGAAAAGGGCTCGAAACTAGCTAAGCCAGCTTCTATGCTCAAATTTTTAAAGCATGTTTGAGATTTCATATCATTTAGCGTGGACATACATATGATATTCAAGTAGTCAAGCACACTTGAAGGATGTTGCTTTGCTTGTGTTTCACTGTCTTTTGTAAACTTTCTTTCACTAGCTTGATTGATGGCACTTCCCGTTGTATACTTTTTGTTATGATCTCAAAGTACATGATGTAAAATGTAATTAGTATTGGGCTCGAGCGATACCTTGAGTTATTACAGGGATAACAATTATTCTGTTACATGGAATTGATAATTGATTTTTTTTATATTTTTTTTATTATTATTGTCGTTACCATTATTTCATGACCGAGCCGAAGGAGTAGGCTCAATATTACAAGGAGAAGACGTAATACTCTCCAAGTTCCCCAGCATAAAAGTTTGTTGATAAAAGTCGGATGATCAAACCTTGGTGACAAGATAGGCAAACAAGCAAAGATGCGGAAAAATACAGGAAATTTAAGGGAGGAGGAAGAAAGATGTTAATGATGACAACTTGACAAGAGAGGTTATTATCAAGGGAGATGGTTACCTTTCAATTCAAAACACAATTCGGGAACTCATCCTCCTACAATCTTTGCCCAAATTTCTCAGGCTGGAAATATATTGCTGTAACCTTTAACTCGTTTCTTACTGTTGCTGTAACCAAGAAGTGGAAGGTTTGAGCAACCTTTCACTCATTTCTTATTGTTGCTGTAACCAAGAAGTGGGAAGTTTATCAACTACTAGTAGTTGTGTAAGACAGCTTACATTTG ATGCAGTTGAGCGAAAATGAGGGAATCGAAGGGAAGACGATGGTGGTGACTGGTGGTTTGGGCTACTTGGGTGCTTCTCTCTGCCTCGAGCTTCTCCGACGAGGTGCTCGCCAGGTCCGATCCCTCGACCTCCGTTCAGTTTCACCTTGGTCCTCTCAACTCTCTCTCAATCCTGCCTTTCTTCACGTCCGAGGGGACATTACGAGCCAAAAGGATGTCAAGAAGGCTCTAAAAGGGGCGGATTGCGTTTTCCATGTTGCTTCCTATGGCATGTCGGGTAAAGAAATGCTTCAAAATGGTCGTATTGACAATGTTAATATAAATGGAACCTGCCTTATACTGGATGCATGCATGGATTTTGGGATCAAGAGGCTTGTCTATGTGAGTACTTGCAATGTTGTTTTTGGGGGAAAAGAGATCATCAATGGGGATGAAACTCTGCCTTATCAACCTCCAGATTACCATGCTGATCCTTATGGCCGCAGCAAATCCATTGCTGAACAGCTAGTCCTGAAATATAATGGTCGCCCTTTCAGGGAGAAAAATGGTGAACATCTTTACACCTGTGCCATTCGTCCTGCTGGTATATATGGACCTGGTGAAGAGAGACACTTTCCACGGATAGTGAATTTTGCAAAGTTAGGTCTGGTGGTATTTAGAGTTGGTGATCCAACTATTAAATCAGACTGGGTTTATGTGGATAATCTTGTAGTGGCTCTTCTATTGGCAAGTATGGGGCTTTTAGATGATATTCCTGGGAGAGAGGGATGCCCTGTAGCAGCTGGACAGTCATACTTCATCTCTGACGGGTGTCCAGTTAATTCTTTTGAGTTCGTCCGTCCTCTTTTGAGGAGCCTGGACTATGATCTACCAAACACCTCATTGAGTTTACCCTCGGCTCTTGTGGTTGGAAATATATTTTTGGTTGTCTATACCATTCTTTACCCATGGCTTAACAAATCATGGCTTCCACAACCATTGCTTCTTCCTGCTGAAGTATACAAGGTTGGTGTTACACATTATTTCTCGTTGCTAAAAGCCAAGAAGGAGCTGGGTTACATTCCAATGGTGAGCCCCGAAGAAGGCATGGCAGCAACGATTTCATACTGGAAAGATAGGAAGAAGAGAAGCCTAGATGGGCCTACGATATATGCATGGATATTCTGCGTGTTTGGAATGTCTGCTCTGATAAGTGTCGCCCTCTTTCCAGATTTCGGTCCTCTTTCACCCATAAAAACTCTGGCTCTCTTCTTTTATCAATCAATACGTAATATACGGATAATTAGCTTTTTAGCTGTAGGGGCACATGTTGCAGAGAGCATTTACGCATGGCACCTTGCCAAAAAAGTGGATCCTGCAAATGCAAAGGGTTGGTTTTTGCAGACTTTTGTTTTGGGGATCTTCTCGTTGCGTTTACTGTTGAAAAGGGCTCGAAACTAG MQLSENEGIEGKTMVVTGGLGYLGASLCLELLRRGARQVRSLDLRSVSPWSSQLSLNPAFLHVRGDITSQKDVKKALKGADCVFHVASYGMSGKEMLQNGRIDNVNINGTCLILDACMDFGIKRLVYVSTCNVVFGGKEIINGDETLPYQPPDYHADPYGRSKSIAEQLVLKYNGRPFREKNGEHLYTCAIRPAGIYGPGEERHFPRIVNFAKLGLVVFRVGDPTIKSDWVYVDNLVVALLLASMGLLDDIPGREGCPVAAGQSYFISDGCPVNSFEFVRPLLRSLDYDLPNTSLSLPSALVVGNIFLVVYTILYPWLNKSWLPQPLLLPAEVYKVGVTHYFSLLKAKKELGYIPMVSPEEGMAATISYWKDRKKRSLDGPTIYAWIFCVFGMSALISVALFPDFGPLSPIKTLALFFYQSIRNIRIISFLAVGAHVAESIYAWHLAKKVDPANAKGWFLQTFVLGIFSLRLLLKRARN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25435.1 vs. NCBI nr
Match: gi|902176728|gb|KNA08826.1| (hypothetical protein SOVF_159030 [Spinacia oleracea]) HSP 1 Score: 981.1 bits (2535), Expect = 6.900e-283 Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 1
BLAST of Spo25435.1 vs. NCBI nr
Match: gi|731314449|ref|XP_010686662.1| (PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 835.5 bits (2157), Expect = 4.700e-239 Identity = 399/479 (83.30%), Postives = 437/479 (91.23%), Query Frame = 1
BLAST of Spo25435.1 vs. NCBI nr
Match: gi|694394466|ref|XP_009372627.1| (PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Pyrus x bretschneideri]) HSP 1 Score: 730.3 bits (1884), Expect = 2.100e-207 Identity = 336/480 (70.00%), Postives = 407/480 (84.79%), Query Frame = 1
BLAST of Spo25435.1 vs. NCBI nr
Match: gi|657963522|ref|XP_008373374.1| (PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Malus domestica]) HSP 1 Score: 728.8 bits (1880), Expect = 6.200e-207 Identity = 335/480 (69.79%), Postives = 407/480 (84.79%), Query Frame = 1
BLAST of Spo25435.1 vs. NCBI nr
Match: gi|694451449|ref|XP_009350894.1| (PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Pyrus x bretschneideri]) HSP 1 Score: 726.9 bits (1875), Expect = 2.400e-206 Identity = 335/480 (69.79%), Postives = 406/480 (84.58%), Query Frame = 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQM3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_159030 PE=3 SV=1) HSP 1 Score: 981.1 bits (2535), Expect = 4.800e-283 Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FU49_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013980 PE=3 SV=1) HSP 1 Score: 835.5 bits (2157), Expect = 3.300e-239 Identity = 399/479 (83.30%), Postives = 437/479 (91.23%), Query Frame = 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Match: M5WPD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004912mg PE=3 SV=1) HSP 1 Score: 721.8 bits (1862), Expect = 5.300e-205 Identity = 338/480 (70.42%), Postives = 404/480 (84.17%), Query Frame = 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Match: U5GRQ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s00660g PE=3 SV=1) HSP 1 Score: 719.9 bits (1857), Expect = 2.000e-204 Identity = 333/479 (69.52%), Postives = 405/479 (84.55%), Query Frame = 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Match: K7WNV1_SOLTU (3-beta-hydroxy-delta5-steroid dehydrogenase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 719.5 bits (1856), Expect = 2.600e-204 Identity = 339/478 (70.92%), Postives = 404/478 (84.52%), Query Frame = 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Match: D42E1_DANRE (Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 2.900e-79 Identity = 177/389 (45.50%), Postives = 234/389 (60.15%), Query Frame = 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Match: D42E1_MOUSE (Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-77 Identity = 173/347 (49.86%), Postives = 219/347 (63.11%), Query Frame = 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Match: D42E1_MACFA (Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-77 Identity = 169/344 (49.13%), Postives = 216/344 (62.79%), Query Frame = 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Match: D42E1_HUMAN (Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2) HSP 1 Score: 287.0 bits (733), Expect = 3.900e-76 Identity = 168/344 (48.84%), Postives = 211/344 (61.34%), Query Frame = 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Match: D42E1_BOVIN (Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2) HSP 1 Score: 286.2 bits (731), Expect = 6.700e-76 Identity = 166/344 (48.26%), Postives = 210/344 (61.05%), Query Frame = 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Match: AT2G33630.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 670.6 bits (1729), Expect = 7.100e-193 Identity = 317/478 (66.32%), Postives = 384/478 (80.33%), Query Frame = 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Match: AT1G47290.2 (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1) HSP 1 Score: 201.4 bits (511), Expect = 1.200e-51 Identity = 134/387 (34.63%), Postives = 205/387 (52.97%), Query Frame = 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Match: AT2G26260.1 (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2) HSP 1 Score: 183.3 bits (464), Expect = 3.400e-46 Identity = 123/363 (33.88%), Postives = 189/363 (52.07%), Query Frame = 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Match: AT2G43420.1 (3-beta hydroxysteroid dehydrogenase/isomerase family protein) HSP 1 Score: 141.4 bits (355), Expect = 1.500e-33 Identity = 115/378 (30.42%), Postives = 182/378 (48.15%), Query Frame = 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Match: AT4G33360.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 5.000e-13 Identity = 97/379 (25.59%), Postives = 161/379 (42.48%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25435.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo25435.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo25435.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo25435.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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