Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATCAAATCAGAAACCCTAACTCGTCAATCCACAACCCCAAATTCATCCTCAGATCAAATCGATTCAATCGATCCAATCCTCCACATCCTCCGAATCATCCCATTCTCTTTCCTTCATCTTCCTCGCCTCCGCCTCAAACTCCCCTCACTCTCCCTCCCTTCCCCCATGACAGTTTTCTCTCTCATCCTCCTCACCTACTTCATGGTCGTCTCCGGAATTGTCTATGACGTTATCGTCGAACCCCCCGGCATCGGTTCCACTCAAGATCCCCGCACCGGGGCCGTTAAACCCGTCGTCTTCCTCGCGGGTCGGGTTAACGGGCAATACATTATTGAAGGGTTGTCTTCTGGGTTCATGTTTCTGCTTGGTGGTGTTGGAATCATTCTAATGGATCTTGCTCTTGATAAGAACCGCGATCGGAGTGTTCGAGTTTCGTATGCTTCTGCTGGGATTGCTTCCGTTGTTATTGCTTATATCATGAGTATGCTTTTTATTCGCATTAAGATCCCTGCTTATTTAAGGTCGTAA ATGGCGATCAAATCAGAAACCCTAACTCGTCAATCCACAACCCCAAATTCATCCTCAGATCAAATCGATTCAATCGATCCAATCCTCCACATCCTCCGAATCATCCCATTCTCTTTCCTTCATCTTCCTCGCCTCCGCCTCAAACTCCCCTCACTCTCCCTCCCTTCCCCCATGACAGTTTTCTCTCTCATCCTCCTCACCTACTTCATGGTCGTCTCCGGAATTGTCTATGACGTTATCGTCGAACCCCCCGGCATCGGTTCCACTCAAGATCCCCGCACCGGGGCCGTTAAACCCGTCGTCTTCCTCGCGGGTCGGGTTAACGGGCAATACATTATTGAAGGGTTGTCTTCTGGGTTCATGTTTCTGCTTGGTGGTGTTGGAATCATTCTAATGGATCTTGCTCTTGATAAGAACCGCGATCGGAGTGTTCGAGTTTCGTATGCTTCTGCTGGGATTGCTTCCGTTGTTATTGCTTATATCATGAGTATGCTTTTTATTCGCATTAAGATCCCTGCTTATTTAAGGTCGTAA ATGGCGATCAAATCAGAAACCCTAACTCGTCAATCCACAACCCCAAATTCATCCTCAGATCAAATCGATTCAATCGATCCAATCCTCCACATCCTCCGAATCATCCCATTCTCTTTCCTTCATCTTCCTCGCCTCCGCCTCAAACTCCCCTCACTCTCCCTCCCTTCCCCCATGACAGTTTTCTCTCTCATCCTCCTCACCTACTTCATGGTCGTCTCCGGAATTGTCTATGACGTTATCGTCGAACCCCCCGGCATCGGTTCCACTCAAGATCCCCGCACCGGGGCCGTTAAACCCGTCGTCTTCCTCGCGGGTCGGGTTAACGGGCAATACATTATTGAAGGGTTGTCTTCTGGGTTCATGTTTCTGCTTGGTGGTGTTGGAATCATTCTAATGGATCTTGCTCTTGATAAGAACCGCGATCGGAGTGTTCGAGTTTCGTATGCTTCTGCTGGGATTGCTTCCGTTGTTATTGCTTATATCATGAGTATGCTTTTTATTCGCATTAAGATCCCTGCTTATTTAAGGTCGTAA MAIKSETLTRQSTTPNSSSDQIDSIDPILHILRIIPFSFLHLPRLRLKLPSLSLPSPMTVFSLILLTYFMVVSGIVYDVIVEPPGIGSTQDPRTGAVKPVVFLAGRVNGQYIIEGLSSGFMFLLGGVGIILMDLALDKNRDRSVRVSYASAGIASVVIAYIMSMLFIRIKIPAYLRS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25470.1 vs. NCBI nr
Match: gi|902212547|gb|KNA17012.1| (hypothetical protein SOVF_083920 [Spinacia oleracea]) HSP 1 Score: 329.7 bits (844), Expect = 3.100e-87 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of Spo25470.1 vs. NCBI nr
Match: gi|731374500|ref|XP_010666984.1| (PREDICTED: oligosaccharyltransferase complex subunit ostc [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 283.5 bits (724), Expect = 2.500e-73 Identity = 152/176 (86.36%), Postives = 163/176 (92.61%), Query Frame = 1
BLAST of Spo25470.1 vs. NCBI nr
Match: gi|225445963|ref|XP_002265583.1| (PREDICTED: oligosaccharyltransferase complex subunit ostc [Vitis vinifera]) HSP 1 Score: 260.4 bits (664), Expect = 2.300e-66 Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 1
BLAST of Spo25470.1 vs. NCBI nr
Match: gi|449457213|ref|XP_004146343.1| (PREDICTED: oligosaccharyltransferase complex subunit OSTC [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 1.100e-65 Identity = 132/176 (75.00%), Postives = 156/176 (88.64%), Query Frame = 1
BLAST of Spo25470.1 vs. NCBI nr
Match: gi|700210404|gb|KGN65500.1| (hypothetical protein Csa_1G427500 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 1.100e-65 Identity = 132/176 (75.00%), Postives = 156/176 (88.64%), Query Frame = 1
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDT8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083920 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.200e-87 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7D3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_005870 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 1.800e-73 Identity = 152/176 (86.36%), Postives = 163/176 (92.61%), Query Frame = 1
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Match: D7SQF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00400 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.600e-66 Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 1
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LUD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G427500 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.000e-66 Identity = 132/176 (75.00%), Postives = 156/176 (88.64%), Query Frame = 1
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Match: A0A061GQJ8_THECC (Oligosaccharyltransferase complex/magnesium transporter family protein OS=Theobroma cacao GN=TCM_039631 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.300e-65 Identity = 133/176 (75.57%), Postives = 156/176 (88.64%), Query Frame = 1
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Match: OSTC_DANRE (Oligosaccharyltransferase complex subunit ostc OS=Danio rerio GN=ostc PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.900e-28 Identity = 65/142 (45.77%), Postives = 100/142 (70.42%), Query Frame = 1
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Match: OSTCA_XENLA (Oligosaccharyltransferase complex subunit ostc-A OS=Xenopus laevis GN=ostc-a PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.900e-28 Identity = 65/142 (45.77%), Postives = 99/142 (69.72%), Query Frame = 1
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Match: OSTCB_XENLA (Oligosaccharyltransferase complex subunit ostc-B OS=Xenopus laevis GN=ostc-b PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.900e-28 Identity = 66/142 (46.48%), Postives = 99/142 (69.72%), Query Frame = 1
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Match: OSTC_XENTR (Oligosaccharyltransferase complex subunit ostc OS=Xenopus tropicalis GN=ostc PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.500e-28 Identity = 65/142 (45.77%), Postives = 99/142 (69.72%), Query Frame = 1
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Match: OSTC_CHICK (Oligosaccharyltransferase complex subunit OSTC OS=Gallus gallus GN=OSTC PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.600e-28 Identity = 64/142 (45.07%), Postives = 99/142 (69.72%), Query Frame = 1
BLAST of Spo25470.1 vs. TAIR (Arabidopsis)
Match: AT4G29870.1 (Oligosaccharyltransferase complex/magnesium transporter family protein) HSP 1 Score: 253.1 bits (645), Expect = 1.300e-67 Identity = 129/164 (78.66%), Postives = 147/164 (89.63%), Query Frame = 1
BLAST of Spo25470.1 vs. TAIR (Arabidopsis)
Match: AT2G19340.1 (Oligosaccharyltransferase complex/magnesium transporter family protein) HSP 1 Score: 224.6 bits (571), Expect = 5.000e-59 Identity = 114/163 (69.94%), Postives = 142/163 (87.12%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25470.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25470.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25470.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25470.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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