Spo25523 (gene)

Overview
NameSpo25523
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L32
LocationSpoScf_01416 : 159797 .. 162989 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAGAGAAGCAGAAGCCCAAAACGTTTTTAAAAAAGCCTAGGTTTTATTGAAAGTCCACTATTTGCTACGAAGTTAGGGTTCATAAGCCCTCTTTATTTCTTCCCATTCCCCTTCGTCTTCATCATTCTTGCGCCGTCTATCCTCTGCTTCTACTCTCAGGTTTCTCTCTCTTCTTTCCCCTTTTCCTCTTCTTCTTCATGTTTCGAATTCATTTAATGTTAATGTATATTATTCACACCATATTTTTAGATTCTTAGATTCGGAATTTTGATTTTGAATCAATATTTGTGGCGTTTGTTGTAGTTGTTTTGTATTAATTTGTCGTGTGTCTGGTTTGTGATTTTGAAAATTCATTAAAGCTCATACAAAAGTTCGTTTTTCCGATTTTTCTGAGCGATAAATTAAGAAATTGGTTGAGATTGTTGCCCTGAAAGGTTAATATATTCAGAATATTATTTGGGTCTTAAATTATTTTGACGATTAGTGATCTAAATTTATAAGATTTAGAAAACTTCTTCTTTGATAGAAGTGTATGGCCCCAGTTTTTGTTGCATGATATTGCTAGTTCATTAAAATTGTAAACTAAACGTAGGAGCCGAAAAACCTCTTTCCATCTCTAGGGTTTCACTGCCATTCTTCTTCACTCATTGTAAGTTTTCTCTTTTCTCACTCATTTAGCCATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGGTATATTATCCGGTGTTTAATCGTCAATCTTTTATAGTTTTTTCAGATTCTGATAATCAATTTTATTCATCAATATCTTTATATTTTGATAGTTCAATTTTGATAGTTCAATGTTTATTTTGAATGAAATATCAGAATAAATGAACGTTTTACCGATTTTAGTTGTTATAATTCTTAGATTTTTGTACTAGTAGTGTAGTTTCAAATTTATTGCTGCTTGTTGAATTGTTCTATGTAAAATTTTATCTTATTATTGTAATATTATATTGGATTGGATAAGAATTGGATGCAATTTGAAGTATAACGCCCTTCATATATAGTGGGTAATTATTTTCGCAAAATAAAAGATTTGGTGCAATTTGAAATTGGTGTTCAATGCTCGATATCGGAACTGTTTATTATGTAGGGGTGTAGCAAGTTAGATTCTGTTTGTTTCAACTAAAAGAAATTTCAGAGGAAAGGAAATGATTTTTTCATGCGGAGCAATTTTCAAAGGAAAACATGAGGGAAAAATTACAAAGAAAAATAAAGTAGAAATGGAAATGAGAACAGAGAAAAGGATATCTAATACGGAGTAGATTAGAGTGCAAAATGTGACATTCGAAATTTGTTTTTTCCTAACTAAAGTTGTTTTCCATAGTTGAGAATTTTTTACCCTTACAAAACAAACAAGATCATGTTTTCTCTATCAAAATGAACAGAGCATTCTTATTTTTATTATTTTTTTGCTCTCAACTTGCATACGATACTCTTTCGAGTTTTAATTTGCATTGATATATTCATGTACTCCGTAACTAACACCAAGGAAGTTTACTTATTGTACCGAAGTGGAAACTTAGGTCCCCTATTAAATGCTGATTTATGAAGTGGTGATTTGCTTTAATGTGCTCTATGATCCCATGCCAATGTGAAAGTGTTTATCACACAATTAATTAGCTCAAGATTTGTTAGATATAACGCATATGTGTATTACAATCTCTGGTGTTATGAAGCATGTACTTGTTAACTTTAAGATCGACCTTTTTGAGTTGTACTGGCCTTTTTCATGGGTTTTCTTGTGGTCAAGTGAAGATAGGTGCAATACAATTAAAACTGTGGTTGTAATTTTATTGCTCTTAATTTCATTTCTTATCATTTATCATAGAGGACTCTCTGTATGTTGTCCATGTTCATGTAATTCATTAGCTTTACTGTAGAATTACAACTTGTTTACCTAGAGTGAAACATGGAATAATATGCTAACTTTTGCTGTAAAAAAAGAATAGTATGCTAATTGTAGTTCTGATGCATAACTTGTATTCCAATAAGTTTTTGCATATCTTTTTACGTAGTCTATTGGATCTGGTTGCCTTGACCGTGTAGAATTTGATTCATGTCTATTATGCCAATTAGACTCTGAAATGCTGTACTTAAAATTTTCTGAATGGTTATCGTGTGCAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGTAACAGATTTTCCCGTTGCACTCCTCTTGCCCTGCCTTTTGTTTTCAACTTTTGTTGTGTATTATCCTGACTGATAACCGTTATTTATTTTCCAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGATTCTTTTGTCAAATTTCATGTGGTTGGCTATGTTGTGGACCTGTTGAGTAAAAAAATGGATTTAGATCTTTTTAGAGACCTTCAATGTCTTAACTGTTATGTTCAATTTGTATTATGTTGGCAAGTTGCTCACAATTTTGAAAACTGGAGTTGATGTTATACGACTTCTTTATCAGTCTATTTTCAGCCTTTCAGGCATTAACTAACCATGACATGAGTGTTAATTTTTGAAAACCGTCTCTGCCCTTTTCTGCGAGATCACCTTTTTCCATGGGCATGGAGTGTGTTCTTTGCTTCACGCTATCAAGTTAATGTTAACTTGTCTTTAAGGTGGTGTTTAGTTTGACATTTAACGAGTTAGAAATGGTTCTATTCATGAGTTGAGACATTTTACTAGAGAATATATCAAGTGGGTTTCAAATCCACTTGATCCCCCTAAATTCTCTTACCCACCTAGCTGCCTAACCCTTCAAGATCCACAATCCATTTAGTGCGAGTTACAAACTCAGGATGTGTCTTAGGTGATCCTCCTACTGAGGATCACCATGGTGATTGGTGAATGAATCCTAGCC

mRNA sequence

GGAAAGAGAAGCAGAAGCCCAAAACGTTTTTAAAAAAGCCTAGGTTTTATTGAAAGTCCACTATTTGCTACGAAGTTAGGGTTCATAAGCCCTCTTTATTTCTTCCCATTCCCCTTCGTCTTCATCATTCTTGCGCCGTCTATCCTCTGCTTCTACTCTCAGCCATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGATTCTTTTGTCAAATTTCATGTGGTTGGCTATGTTGTGGACCTGTTGAGTAAAAAAATGGATTTAGATCTTTTTAGAGACCTTCAATGTCTTAACTGTTATGTTCAATTTGTATTATGTTGGCAAGTTGCTCACAATTTTGAAAACTGGAGTTGATGTTATACGACTTCTTTATCAGTCTATTTTCAGCCTTTCAGGCATTAACTAACCATGACATGAGTGTTAATTTTTGAAAACCGTCTCTGCCCTTTTCTGCGAGATCACCTTTTTCCATGGGCATGGAGTGTGTTCTTTGCTTCACGCTATCAAGTTAATGTTAACTTGTCTTTAAGGTGGTGTTTAGTTTGACATTTAACGAGTTAGAAATGGTTCTATTCATGAGTTGAGACATTTTACTAGAGAATATATCAAGTGGGTTTCAAATCCACTTGATCCCCCTAAATTCTCTTACCCACCTAGCTGCCTAACCCTTCAAGATCCACAATCCATTTAGTGCGAGTTACAAACTCAGGATGTGTCTTAGGTGATCCTCCTACTGAGGATCACCATGGTGATTGGTGAATGAATCCTAGCC

Coding sequence (CDS)

ATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGA

Protein sequence

MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINKLARLRSQEDE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25523.1Spo25523.1mRNA


Homology
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902205155|gb|KNA15105.1| (hypothetical protein SOVF_101290, partial [Spinacia oleracea])

HSP 1 Score: 264.6 bits (675), Expect = 9.200e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 29  MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 88

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV
Sbjct: 89  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 148

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 149 INKLARLRSQEDE 161
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902213767|gb|KNA17331.1| (hypothetical protein SOVF_080870 [Spinacia oleracea])

HSP 1 Score: 258.1 bits (658), Expect = 8.600e-66
Identity = 127/133 (95.49%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL+KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902228282|gb|KNA21043.1| (hypothetical protein SOVF_046840 [Spinacia oleracea])

HSP 1 Score: 256.9 bits (655), Expect = 1.900e-65
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|731319339|ref|XP_010670205.1| (PREDICTED: 60S ribosomal protein L32-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|731319500|ref|XP_010670302.1| (PREDICTED: 60S ribosomal protein L32-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 242.3 bits (617), Expect = 4.900e-61
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNV+ELELLMMHNRTYCAEIAHN STKKRK+IVERA QLD+V+
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVNELELLMMHNRTYCAEIAHNTSTKKRKEIVERATQLDVVI 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_101290 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.400e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 29  MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 88

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV
Sbjct: 89  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 148

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 149 INKLARLRSQEDE 161
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCT8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080870 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.000e-66
Identity = 127/133 (95.49%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL+KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046840 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.300e-65
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CYS5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039920 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.100e-63
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039910 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.400e-61
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNV+ELELLMMHNRTYCAEIAHN STKKRK+IVERA QLD+V+
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVNELELLMMHNRTYCAEIAHNTSTKKRKEIVERATQLDVVI 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 5.100e-58
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVV+N SELELLMMHNRTYCAEIAHN+STKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            N+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.600e-58
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKF+V+N SELELLMMHNRTYCAEIAHNISTKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=1 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Match: AT4G18100.1 (Ribosomal protein L32e)

HSP 1 Score: 224.9 bits (572), Expect = 2.900e-59
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVV+N SELELLMMHNRTYCAEIAHN+STKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            N+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Match: AT5G46430.1 (Ribosomal protein L32e)

HSP 1 Score: 224.2 bits (570), Expect = 4.900e-59
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKF+V+N SELELLMMHNRTYCAEIAHNISTKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133
The following BLAST results are available for this feature:
BLAST of Spo25523.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902205155|gb|KNA15105.1|9.2e-68100.hypothetical protein SOVF_1012... [more]
gi|902213767|gb|KNA17331.1|8.6e-6695.4hypothetical protein SOVF_0808... [more]
gi|902228282|gb|KNA21043.1|1.9e-6596.2hypothetical protein SOVF_0468... [more]
gi|731319339|ref|XP_010670205.1|1.2e-6292.4PREDICTED: 60S ribosomal prote... [more]
gi|731319500|ref|XP_010670302.1|4.9e-6188.7PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R6H6_SPIOL6.4e-68100.Uncharacterized protein (Fragm... [more]
A0A0K9RCT8_SPIOL6.0e-6695.4Uncharacterized protein OS=Spi... [more]
A0A0K9RNJ3_SPIOL1.3e-6596.2Uncharacterized protein OS=Spi... [more]
A0A0J8CYS5_BETVU8.1e-6392.4Uncharacterized protein OS=Bet... [more]
A0A0J8CZF4_BETVU3.4e-6188.7Uncharacterized protein OS=Bet... [more]
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BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL321_ARATH5.1e-5884.260S ribosomal protein L32-1 OS... [more]
RL322_ARATH8.6e-5884.260S ribosomal protein L32-2 OS... [more]
RL32_HUMAN3.9e-4266.160S ribosomal protein L32 OS=H... [more]
RL32_RAT3.9e-4266.160S ribosomal protein L32 OS=R... [more]
RL32_PIG3.9e-4266.160S ribosomal protein L32 OS=S... [more]
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BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G18100.12.9e-5984.2Ribosomal protein L32e[more]
AT5G46430.14.9e-5984.2Ribosomal protein L32e[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32ePRODOMPD003823coord: 20..123
score: 1.0
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 16..122
score: 1.3
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
score: 1.9
IPR001515Ribosomal protein L32eunknownSSF52042Ribosomal protein L32ecoord: 3..131
score: 6.54
NoneNo IPR availablePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 1..133
score: 8.4E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0022900 electron transport chain
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0016571 histone methylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000338 protein deneddylation
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0016579 protein deubiquitination
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0006412 translation
biological_process GO:0006414 translational elongation
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0051301 cell division
biological_process GO:0009790 embryo development
biological_process GO:0008152 metabolic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0006567 threonine catabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0001510 RNA methylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0070469 respiratory chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0005618 cell wall
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005874 microtubule
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0016592 mediator complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004073 aspartate-semialdehyde dehydrogenase activity
molecular_function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003852 2-isopropylmalate synthase activity
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0004055 argininosuccinate synthase activity
RNA-Seq Expression