Spo25714 (gene)

Overview
NameSpo25714
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionProtein YIPF
LocationSpoScf_00836 : 265117 .. 265917 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAACAAATTCACCATCCCGCCGGTGTCCTTCCCGTCGTCAGGACCGTCGCCAGCAACACCCGCTACCACCACCCCCGGTCCCACCGGCCGCAATCCACCAGGCATGCTCCACCAACGCCAAGTCCCAACGGCACCATTTCAACCACCGCGTCCCTCCTCCATCCCTTTCATGTCCTTCGACATCGGATCCGCCGCCGCCTCTTCATCTTCCACCTCCTTCCCACCTCCACAACTACGCCAGGACATAGCCTCCTCCTCCGGCGGCCTCTTCTCCGACGAAATCCCTCTCCTGGAAGAACTCGAGATCAACCCATCCCTAATATGGCGCAAAACTCGCTCCTTACTCAACCCATTCCGAGTCGACTCATACCTCCACTCTGACCCCGACCTCTCCGGCCCTTTCCTCTACTACATTGCCTTCGGACTCTTCCAATTACTCGCCGGAAAAGTTCAATTCGGCGTCATCTTAGGCTGGATTGCGATCTCCTCCATCTTTGTTTACTCGATGTTAAACTTTCTAGCTGGAAAAAATGGGAATTTGGATTTGTATCGGTGTTTCAGCGTGGTTGGGTATTGTTTGATGCCAATTGTAATCTACTCTGCTGCCTCACTCTTTCTCCCTCCTGCCGGAACTACAGTTGGGTTTATTGTTGCTGCAGTTTTCGTGATTTGGTCAACTAGGGTTTGCTCTCGGCTTCTGGCGGTTGATGAATTGGGAGCTTCCGAACATCGTGGGTTGATTGCTTATCCTTGTTTCTTGATTTACTGTCTGTTTTCTATGCTTGTTATGTTTTGA

mRNA sequence

ATGTCCAACAAATTCACCATCCCGCCGGTGTCCTTCCCGTCGTCAGGACCGTCGCCAGCAACACCCGCTACCACCACCCCCGGTCCCACCGGCCGCAATCCACCAGGCATGCTCCACCAACGCCAAGTCCCAACGGCACCATTTCAACCACCGCGTCCCTCCTCCATCCCTTTCATGTCCTTCGACATCGGATCCGCCGCCGCCTCTTCATCTTCCACCTCCTTCCCACCTCCACAACTACGCCAGGACATAGCCTCCTCCTCCGGCGGCCTCTTCTCCGACGAAATCCCTCTCCTGGAAGAACTCGAGATCAACCCATCCCTAATATGGCGCAAAACTCGCTCCTTACTCAACCCATTCCGAGTCGACTCATACCTCCACTCTGACCCCGACCTCTCCGGCCCTTTCCTCTACTACATTGCCTTCGGACTCTTCCAATTACTCGCCGGAAAAGTTCAATTCGGCGTCATCTTAGGCTGGATTGCGATCTCCTCCATCTTTGTTTACTCGATGTTAAACTTTCTAGCTGGAAAAAATGGGAATTTGGATTTGTATCGGTGTTTCAGCGTGGTTGGGTATTGTTTGATGCCAATTGTAATCTACTCTGCTGCCTCACTCTTTCTCCCTCCTGCCGGAACTACAGTTGGGTTTATTGTTGCTGCAGTTTTCGTGATTTGGTCAACTAGGGTTTGCTCTCGGCTTCTGGCGGTTGATGAATTGGGAGCTTCCGAACATCGTGGGTTGATTGCTTATCCTTGTTTCTTGATTTACTGTCTGTTTTCTATGCTTGTTATGTTTTGA

Coding sequence (CDS)

ATGTCCAACAAATTCACCATCCCGCCGGTGTCCTTCCCGTCGTCAGGACCGTCGCCAGCAACACCCGCTACCACCACCCCCGGTCCCACCGGCCGCAATCCACCAGGCATGCTCCACCAACGCCAAGTCCCAACGGCACCATTTCAACCACCGCGTCCCTCCTCCATCCCTTTCATGTCCTTCGACATCGGATCCGCCGCCGCCTCTTCATCTTCCACCTCCTTCCCACCTCCACAACTACGCCAGGACATAGCCTCCTCCTCCGGCGGCCTCTTCTCCGACGAAATCCCTCTCCTGGAAGAACTCGAGATCAACCCATCCCTAATATGGCGCAAAACTCGCTCCTTACTCAACCCATTCCGAGTCGACTCATACCTCCACTCTGACCCCGACCTCTCCGGCCCTTTCCTCTACTACATTGCCTTCGGACTCTTCCAATTACTCGCCGGAAAAGTTCAATTCGGCGTCATCTTAGGCTGGATTGCGATCTCCTCCATCTTTGTTTACTCGATGTTAAACTTTCTAGCTGGAAAAAATGGGAATTTGGATTTGTATCGGTGTTTCAGCGTGGTTGGGTATTGTTTGATGCCAATTGTAATCTACTCTGCTGCCTCACTCTTTCTCCCTCCTGCCGGAACTACAGTTGGGTTTATTGTTGCTGCAGTTTTCGTGATTTGGTCAACTAGGGTTTGCTCTCGGCTTCTGGCGGTTGATGAATTGGGAGCTTCCGAACATCGTGGGTTGATTGCTTATCCTTGTTTCTTGATTTACTGTCTGTTTTCTATGCTTGTTATGTTTTGA

Protein sequence

MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMSFDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25714.1Spo25714.1mRNA


Homology
BLAST of Spo25714.1 vs. NCBI nr
Match: gi|902164780|gb|KNA07004.1| (hypothetical protein SOVF_175890 [Spinacia oleracea])

HSP 1 Score: 520.8 bits (1340), Expect = 1.400e-144
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60
           MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS
Sbjct: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60

Query: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120
           FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF
Sbjct: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120

Query: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180
           RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG
Sbjct: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180

Query: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240
           NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL
Sbjct: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240

Query: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIYCLFSMLVMF
Sbjct: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 266

BLAST of Spo25714.1 vs. NCBI nr
Match: gi|902162752|gb|KNA06727.1| (hypothetical protein SOVF_178330 [Spinacia oleracea])

HSP 1 Score: 498.4 bits (1282), Expect = 7.600e-138
Identity = 256/266 (96.24%), Postives = 260/266 (97.74%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60
           MSNKFTIPPVSFPSSGPSP+T A+TTPGP GRNPPGMLHQRQVPTAPFQPPRPSS+PFMS
Sbjct: 1   MSNKFTIPPVSFPSSGPSPST-ASTTPGPGGRNPPGMLHQRQVPTAPFQPPRPSSLPFMS 60

Query: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120
           FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF
Sbjct: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120

Query: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180
           RVDS LHSDPDLSGPFLYYIAFGLFQLL GKVQFGVILGWIAISSIFVYS+LNFLAGKNG
Sbjct: 121 RVDSSLHSDPDLSGPFLYYIAFGLFQLLGGKVQFGVILGWIAISSIFVYSILNFLAGKNG 180

Query: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240
           NLDLYRCFSVVGYCLMPIVIYSAASLFLPP GTTVGFIVAA FVIWSTRVCSRLLAVDEL
Sbjct: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPTGTTVGFIVAAAFVIWSTRVCSRLLAVDEL 240

Query: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIYCLFSMLVMF
Sbjct: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 265

BLAST of Spo25714.1 vs. NCBI nr
Match: gi|731340470|ref|XP_010681411.1| (PREDICTED: protein YIPF5 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 429.1 bits (1102), Expect = 5.600e-117
Identity = 228/266 (85.71%), Postives = 239/266 (89.85%), Query Frame = 1

		  

Query: 4   KFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS--IPFMSF 63
           +FTIPPVSFPSSGPSPAT      GPT   PP ML QR++PTAPFQPPRPSS  IPFMSF
Sbjct: 6   EFTIPPVSFPSSGPSPAT---NPGGPTTTTPPTMLQQRRLPTAPFQPPRPSSSSIPFMSF 65

Query: 64  DIGSAAASSSSTSFPPPQLRQDIASSSG-GLFSDEIPLLEELEINPSLIWRKTRSLLNPF 123
           DIGSAA SSS++SFPPP LR DIASSS  GLF DE PLLEELEINP+LIWRKTRSLLNP 
Sbjct: 66  DIGSAATSSSTSSFPPPHLRNDIASSSSSGLFLDEPPLLEELEINPTLIWRKTRSLLNPI 125

Query: 124 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 183
           RVD  LHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIF+YS+LNFLAGKNG
Sbjct: 126 RVDPSLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFLYSILNFLAGKNG 185

Query: 184 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 243
           NLDLYRCFSVVGYCLMP+VIYSAASLFLPP GTT GF+VAAVFVIW+TRV SRLLAVDEL
Sbjct: 186 NLDLYRCFSVVGYCLMPVVIYSAASLFLPPTGTTAGFVVAAVFVIWATRVSSRLLAVDEL 245

Query: 244 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIY LFSMLVMF
Sbjct: 246 GASEHRGLIAYPCFLIYSLFSMLVMF 268

BLAST of Spo25714.1 vs. NCBI nr
Match: gi|729470243|ref|XP_010527322.1| (PREDICTED: protein YIPF5 homolog isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 291.2 bits (744), Expect = 1.800e-75
Identity = 164/273 (60.07%), Postives = 195/273 (71.43%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS--IPF 60
           M+  FT+PPV FPS G    TPAT           G + QR+ PTAPFQPPRPSS  IPF
Sbjct: 1   MAKDFTVPPVVFPSGG----TPAT-----------GNVQQRRAPTAPFQPPRPSSSAIPF 60

Query: 61  MSFDIGSAAASSSSTSFPPPQLRQDIASSS---GGL--FSDEIPLLEELEINPSLIWRKT 120
           MSFDIGSAA +SS+ S  P      IASSS   GG   F DE PLL+EL I+P  IW+KT
Sbjct: 61  MSFDIGSAAVASSAASVGP--FGGTIASSSSFGGGAASFEDEEPLLDELGIHPDQIWKKT 120

Query: 121 RSLLNPFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLN 180
           RS+LNPFR++  +H D DLSGP   Y+AF LFQLLAGK+QFGVILGWI +SSIF+Y + N
Sbjct: 121 RSILNPFRINQSVHMDSDLSGPIFLYLAFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFN 180

Query: 181 FLAGKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSR 240
            LAG+NGNL+L+ C S+VGYCL+P+VI SA SLF+P     V F++AAVFV+WSTR CS 
Sbjct: 181 MLAGRNGNLNLHTCTSLVGYCLLPVVILSAVSLFVPQGAGPVRFVLAAVFVLWSTRACSN 240

Query: 241 LLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
           L+     G  EHRGLIAY CFLIY LFS+LV+F
Sbjct: 241 LVVSLADGGDEHRGLIAYACFLIYTLFSLLVIF 256

BLAST of Spo25714.1 vs. NCBI nr
Match: gi|225464142|ref|XP_002265566.1| (PREDICTED: protein YIPF5 homolog [Vitis vinifera])

HSP 1 Score: 283.1 bits (723), Expect = 5.000e-73
Identity = 154/268 (57.46%), Postives = 191/268 (71.27%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPS--SIPF 60
           MS +F +PPV FP+ G          PGP        + QR++PTAPFQPPRP+  SIPF
Sbjct: 1   MSKEFNVPPVVFPAGG---------NPGPAA------VAQRRLPTAPFQPPRPANPSIPF 60

Query: 61  MSFDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLN 120
           MSFD+GSAAA+   TSFP PQ   +     G  F DE PLLEEL IN   IW KT S+LN
Sbjct: 61  MSFDVGSAAAA---TSFPAPQFGGNTIGI-GSNFDDEPPLLEELGINTKQIWNKTVSILN 120

Query: 121 PFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGK 180
           PFRV+  LH D DLSGPFL+ ++FGLFQLLAGK+ FG+ILGW+ ++++F+Y + N LAG+
Sbjct: 121 PFRVNPNLHEDADLSGPFLFLMSFGLFQLLAGKIHFGIILGWVIVAALFLYVVFNMLAGR 180

Query: 181 NGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVD 240
           NGNLDLYRC S++GYC++P+VI SA SLF+P  G  + F +AAVFV+WSTRVC+RLL   
Sbjct: 181 NGNLDLYRCLSLIGYCMLPLVILSAFSLFVPQGGLVI-FGMAAVFVLWSTRVCTRLLVEL 240

Query: 241 ELGASEHRGLIAYPCFLIYCLFSMLVMF 267
                EHRGLI Y CFLIY LFS+LV+F
Sbjct: 241 ASCGDEHRGLITYACFLIYMLFSLLVIF 248

BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QID2_SPIOL (Protein YIPF OS=Spinacia oleracea GN=SOVF_175890 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 9.900e-145
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60
           MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS
Sbjct: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60

Query: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120
           FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF
Sbjct: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120

Query: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180
           RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG
Sbjct: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180

Query: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240
           NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL
Sbjct: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240

Query: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIYCLFSMLVMF
Sbjct: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 266

BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHJ1_SPIOL (Protein YIPF OS=Spinacia oleracea GN=SOVF_178330 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.300e-138
Identity = 256/266 (96.24%), Postives = 260/266 (97.74%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSSIPFMS 60
           MSNKFTIPPVSFPSSGPSP+T A+TTPGP GRNPPGMLHQRQVPTAPFQPPRPSS+PFMS
Sbjct: 1   MSNKFTIPPVSFPSSGPSPST-ASTTPGPGGRNPPGMLHQRQVPTAPFQPPRPSSLPFMS 60

Query: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120
           FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF
Sbjct: 61  FDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPF 120

Query: 121 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 180
           RVDS LHSDPDLSGPFLYYIAFGLFQLL GKVQFGVILGWIAISSIFVYS+LNFLAGKNG
Sbjct: 121 RVDSSLHSDPDLSGPFLYYIAFGLFQLLGGKVQFGVILGWIAISSIFVYSILNFLAGKNG 180

Query: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 240
           NLDLYRCFSVVGYCLMPIVIYSAASLFLPP GTTVGFIVAA FVIWSTRVCSRLLAVDEL
Sbjct: 181 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPTGTTVGFIVAAAFVIWSTRVCSRLLAVDEL 240

Query: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIYCLFSMLVMF
Sbjct: 241 GASEHRGLIAYPCFLIYCLFSMLVMF 265

BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4H8_BETVU (Protein YIPF OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g141340 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.900e-117
Identity = 228/266 (85.71%), Postives = 239/266 (89.85%), Query Frame = 1

		  

Query: 4   KFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS--IPFMSF 63
           +FTIPPVSFPSSGPSPAT      GPT   PP ML QR++PTAPFQPPRPSS  IPFMSF
Sbjct: 6   EFTIPPVSFPSSGPSPAT---NPGGPTTTTPPTMLQQRRLPTAPFQPPRPSSSSIPFMSF 65

Query: 64  DIGSAAASSSSTSFPPPQLRQDIASSSG-GLFSDEIPLLEELEINPSLIWRKTRSLLNPF 123
           DIGSAA SSS++SFPPP LR DIASSS  GLF DE PLLEELEINP+LIWRKTRSLLNP 
Sbjct: 66  DIGSAATSSSTSSFPPPHLRNDIASSSSSGLFLDEPPLLEELEINPTLIWRKTRSLLNPI 125

Query: 124 RVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNG 183
           RVD  LHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIF+YS+LNFLAGKNG
Sbjct: 126 RVDPSLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFLYSILNFLAGKNG 185

Query: 184 NLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDEL 243
           NLDLYRCFSVVGYCLMP+VIYSAASLFLPP GTT GF+VAAVFVIW+TRV SRLLAVDEL
Sbjct: 186 NLDLYRCFSVVGYCLMPVVIYSAASLFLPPTGTTAGFVVAAVFVIWATRVSSRLLAVDEL 245

Query: 244 GASEHRGLIAYPCFLIYCLFSMLVMF 267
           GASEHRGLIAYPCFLIY LFSMLVMF
Sbjct: 246 GASEHRGLIAYPCFLIYSLFSMLVMF 268

BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Match: F6HVQ5_VITVI (Protein YIPF OS=Vitis vinifera GN=VIT_13s0106g00730 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.500e-73
Identity = 154/268 (57.46%), Postives = 191/268 (71.27%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPS--SIPF 60
           MS +F +PPV FP+ G          PGP        + QR++PTAPFQPPRP+  SIPF
Sbjct: 1   MSKEFNVPPVVFPAGG---------NPGPAA------VAQRRLPTAPFQPPRPANPSIPF 60

Query: 61  MSFDIGSAAASSSSTSFPPPQLRQDIASSSGGLFSDEIPLLEELEINPSLIWRKTRSLLN 120
           MSFD+GSAAA+   TSFP PQ   +     G  F DE PLLEEL IN   IW KT S+LN
Sbjct: 61  MSFDVGSAAAA---TSFPAPQFGGNTIGI-GSNFDDEPPLLEELGINTKQIWNKTVSILN 120

Query: 121 PFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGK 180
           PFRV+  LH D DLSGPFL+ ++FGLFQLLAGK+ FG+ILGW+ ++++F+Y + N LAG+
Sbjct: 121 PFRVNPNLHEDADLSGPFLFLMSFGLFQLLAGKIHFGIILGWVIVAALFLYVVFNMLAGR 180

Query: 181 NGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVD 240
           NGNLDLYRC S++GYC++P+VI SA SLF+P  G  + F +AAVFV+WSTRVC+RLL   
Sbjct: 181 NGNLDLYRCLSLIGYCMLPLVILSAFSLFVPQGGLVI-FGMAAVFVLWSTRVCTRLLVEL 240

Query: 241 ELGASEHRGLIAYPCFLIYCLFSMLVMF 267
                EHRGLI Y CFLIY LFS+LV+F
Sbjct: 241 ASCGDEHRGLITYACFLIYMLFSLLVIF 248

BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Match: M4CM48_BRARP (Protein YIPF OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.300e-72
Identity = 155/271 (57.20%), Postives = 188/271 (69.37%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS--IPF 60
           M+  F IPPV FPS G      +T  P          + QR+ P APFQPPRPSS  IPF
Sbjct: 1   MTKDFAIPPVVFPSGG------STANPN---------VQQRRFPAAPFQPPRPSSSAIPF 60

Query: 61  MSFDIGSAAASSSSTSFPPPQLRQDIASSSGG---LFSDEIPLLEELEINPSLIWRKTRS 120
           MSFDIGSAAASS++ + P        AS  GG    F DE PLL+EL I+P  IW+KTRS
Sbjct: 61  MSFDIGSAAASSAAPAGPFTGTLNSSASFGGGGSSSFEDEEPLLDELGIHPDQIWKKTRS 120

Query: 121 LLNPFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFL 180
           +LNPFR++  +H D DLSGP   Y+A  LFQLLAGK+QFGVILGWI +SSIF+Y++ N L
Sbjct: 121 ILNPFRINQTVHHDSDLSGPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYAVFNML 180

Query: 181 AGKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLL 240
           AG+NGNL+L+ C S+VGYCL+P+VI SA SLF+P     V F+VA VFV+WSTR CS L+
Sbjct: 181 AGRNGNLNLHTCTSLVGYCLLPVVILSAVSLFVPQGAGAVRFVVAGVFVLWSTRACSALV 240

Query: 241 AVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
                G  EHRGLI+Y CFLIY LFS+LV+F
Sbjct: 241 VSLADGGEEHRGLISYACFLIYTLFSLLVIF 256

BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Match: YIPF7_BOVIN (Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.500e-26
Identity = 83/222 (37.39%), Postives = 126/222 (56.76%), Query Frame = 1

		  

Query: 49  QPPRPSSIPFMSFDIGSAAASSSSTSFPPPQLRQDIASSSGGL--FSDEIPLLEELEINP 108
           + P+P+ +P         A+S  S  F  P   QD  S S  +  F +E PLLEEL IN 
Sbjct: 44  EQPQPAFVPAEML-----ASSGYSGQFFQPASNQDYYSPSSYIDSFEEEPPLLEELGINF 103

Query: 109 SLIWRKTRSLLNPFR-VDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISS 168
             IW+KT ++LNP +  D  + ++ DL+GP L+ +A G   LLAGKVQFG + G  AI  
Sbjct: 104 DHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLAGKVQFGYVYGMSAIGC 163

Query: 169 IFVYSMLNFLAGKNGNLDLYRCF-SVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFV 228
           + ++++LN ++    +   Y C  SV+GYCL+P+VI S+ ++F    G T G + A V +
Sbjct: 164 LGIHALLNLMSSSGVS---YGCVASVLGYCLLPMVILSSCAIFFSLQG-TFGTVSALVII 223

Query: 229 IWSTRVCSRLLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
            W +   S++     L     + LIAYPC L+Y LF+++ +F
Sbjct: 224 GWCSLSASKIF-TSALAMEGQQLLIAYPCALLYGLFALVTVF 255

BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Match: YIPF5_DICDI (Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.000e-26
Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 1

		  

Query: 92  FSDEIPLLEELEINPSLIWRKTRSLLNPFR-VDSYLHSDPDLSGPFLYYIAFGLFQLLAG 151
           F +E+PLLEEL IN   I  KT S+LNP + +DS++  D DL GP L+ +  G   L++G
Sbjct: 41  FDNELPLLEELGINFDHIRSKTLSVLNPLKKIDSHIMDDTDLGGPILFGLLLGFSLLMSG 100

Query: 152 KVQFGVILGWIAISSIFVYSMLNFLAGKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPP 211
           K+QFG I G   I  + +Y +LN ++ K   +D+YR  SV+GYCL+P++  S  SL +  
Sbjct: 101 KIQFGYIYGLGLIGCVSMYIVLNLMSEKG--IDIYRVISVLGYCLLPMIFLSFTSLIINI 160

Query: 212 AGTTVGFIVAAVFVIWSTRVCSRLLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
            G  VG+I+    ++WST   S++  V  L   + R L+AYP  L+Y  F+++  F
Sbjct: 161 NG-MVGYILIGFAIVWSTYSASKMF-VKVLSMIDQRILVAYPVGLLYTGFALITAF 212

BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Match: YIPF5_XENTR (Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.100e-24
Identity = 71/196 (36.22%), Postives = 118/196 (60.20%), Query Frame = 1

		  

Query: 75  FPPPQLRQDIASSS--GGLFSDEIPLLEELEINPSLIWRKTRSLLNPFRV-DSYLHSDPD 134
           + P Q     A+ S  G  F DE PLLEEL IN   IW+KT ++L+P +V D  + ++ D
Sbjct: 66  YQPTQTYTPAATDSVYGSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETD 125

Query: 135 LSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNGNLDLYRCF-SV 194
           L+GP ++ +AFG   LLAGK+QFG + G  AI  + +Y +LN ++    +   + C  SV
Sbjct: 126 LAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLMSMTGVS---FGCVSSV 185

Query: 195 VGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDELGASEHRGLIA 254
           +GYCL+P++I S+ ++     G  +G ++AA+ + W +   S++  +  L     + L+A
Sbjct: 186 LGYCLLPMIILSSFAVIFSLQG-ILGIVLAALIIGWCSFSASKIF-ISALAMDGQQVLVA 245

Query: 255 YPCFLIYCLFSMLVMF 267
           YPC L+Y +F+++ +F
Sbjct: 246 YPCALLYGVFALISVF 256

BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Match: YIPF7_MOUSE (Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.900e-24
Identity = 82/243 (33.74%), Postives = 129/243 (53.09%), Query Frame = 1

		  

Query: 27  PGPTGRNPPGMLHQRQVPTAPFQPPRPSSIP-FMSFDIGSAAASSSSTSFPPPQLRQDIA 86
           P     N  G ++  + P A  QP  P+    F+  D G           P   L     
Sbjct: 23  PSCNDSNAYGNVYGYREPQATEQPSSPAPPEMFLPSDYGGQLFQ------PASNLDYYSQ 82

Query: 87  SSSGGLFSDEIPLLEELEINPSLIWRKTRSLLNPFR-VDSYLHSDPDLSGPFLYYIAFGL 146
           S S   F +E PLLEEL IN   IW+KT ++LNP +  D  + ++ DL+GP L+ +A G 
Sbjct: 83  SPSVDTFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGA 142

Query: 147 FQLLAGKVQFGVILGWIAISSIFVYSMLNFLAGKNGNLDLYRCF-SVVGYCLMPIVIYSA 206
             L+AGK QFG + G  AI  + ++++LN ++    +   Y C  SV+GYCL+P+V+ S+
Sbjct: 143 TLLMAGKAQFGYVYGMSAIGCLGIHALLNLMSNSGVS---YGCVASVLGYCLLPMVLLSS 202

Query: 207 ASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDELGASEHRGLIAYPCFLIYCLFSML 266
            ++F    G T+G + A + + W +   S++  +  L     + L+AYPC L+Y LF++L
Sbjct: 203 CAVFFSLQG-TIGTMSALLIITWCSLSASKIF-ISALAMEGQQLLVAYPCALLYGLFALL 254

BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Match: YIPF5_MACFA (Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.800e-23
Identity = 65/179 (36.31%), Postives = 108/179 (60.34%), Query Frame = 1

		  

Query: 89  GGLFSDEIPLLEELEINPSLIWRKTRSLLNPFRV-DSYLHSDPDLSGPFLYYIAFGLFQL 148
           G  F DE PLLEEL IN   IW+KT ++L+P +V D  + ++ DL+GP ++ +AFG   L
Sbjct: 83  GNSFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 149 LAGKVQFGVILGWIAISSIFVYSMLNFLAGKNGNLDLYRCFSVVGYCLMPIVIYSAASLF 208
           LAGK+QFG + G  AI  + ++ +LN ++    +       SV+GYCL+P+++ S+ ++ 
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVA--SVLGYCLLPMILLSSFAVI 202

Query: 209 LPPAGTTVGFIVAAVFVIWSTRVCSRLLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
               G  VG I+ A  + W +   S++  +  L     + L+AYPC L+Y +F+++ +F
Sbjct: 203 FSLQG-MVGIILTAGIIGWCSFSASKIF-ISALAMEGQQLLVAYPCALLYGVFALISVF 257

BLAST of Spo25714.1 vs. TAIR (Arabidopsis)
Match: AT2G36300.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 275.4 bits (703), Expect = 3.700e-74
Identity = 152/270 (56.30%), Postives = 187/270 (69.26%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS--IPF 60
           M+  F +PPV FPS G S            G N    + QR+ P  PFQPPRPSS  IPF
Sbjct: 1   MTKDFAVPPVVFPSGGSSG-----------GAN----VQQRRFPATPFQPPRPSSSAIPF 60

Query: 61  MSFDIGSAAASSSSTSFPPPQLRQDIASSSGGL--FSDEIPLLEELEINPSLIWRKTRSL 120
           MSFDIGSAAASS++ + P        +S  GG   F DE PLL+EL I+P  IW+KTRS+
Sbjct: 61  MSFDIGSAAASSATPAGPFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSI 120

Query: 121 LNPFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYSMLNFLA 180
           LNPFR++  +H D DLSGP   Y+A  LFQLLAGK+QFGVILGWI +SSIF+Y + N LA
Sbjct: 121 LNPFRINQAVHKDSDLSGPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLA 180

Query: 181 GKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRVCSRLLA 240
           G+NGNL+L+ C S+VGYCL+P+V+ SA SLF+P     V F++AA+FV+WSTR CS L+ 
Sbjct: 181 GRNGNLNLHTCTSLVGYCLLPVVVLSAVSLFVPQGAGPVRFVLAALFVLWSTRACSTLVV 240

Query: 241 VDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
               G  EHRGLIAY CFLIY LFS+LV+F
Sbjct: 241 SLADGGEEHRGLIAYACFLIYTLFSLLVIF 255

BLAST of Spo25714.1 vs. TAIR (Arabidopsis)
Match: AT3G52760.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 264.2 bits (674), Expect = 8.500e-71
Identity = 147/276 (53.26%), Postives = 183/276 (66.30%), Query Frame = 1

		  

Query: 1   MSNKFTIPPVSFPSSGPSPATPATTTPGPTGRNPPGMLHQRQVPTAPFQPPRPSS----I 60
           M+  F IPPV FP+SG SPAT                + QR+VPTAP+QPPR SS    I
Sbjct: 1   MTKDFPIPPVVFPTSGSSPAT--------------ANVQQRRVPTAPYQPPRQSSASSSI 60

Query: 61  PFMSFDIGSAAASSSSTSFPPPQLRQDIASSS------GGLFSDEIPLLEELEINPSLIW 120
           PF+ F+IGSAA      S P       IASS+         F DE PLL+EL I+P  IW
Sbjct: 61  PFIPFEIGSAA-----VSMPAGPFDGTIASSASFGRGVSASFEDEEPLLDELGIHPDQIW 120

Query: 121 RKTRSLLNPFRVDSYLHSDPDLSGPFLYYIAFGLFQLLAGKVQFGVILGWIAISSIFVYS 180
           +KTRS+LNPFR++  +H D DLSGP   Y+A  LFQLLAGK+QFGVILGW+ +SSIF+Y 
Sbjct: 121 KKTRSILNPFRINQTVHKDSDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYI 180

Query: 181 MLNFLAGKNGNLDLYRCFSVVGYCLMPIVIYSAASLFLPPAGTTVGFIVAAVFVIWSTRV 240
           + N LAG+NGNL+L+ C S+VGY L+P+VI SA SLF+P     V F++ A FV+W+TR 
Sbjct: 181 VFNMLAGRNGNLNLHTCTSLVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRA 240

Query: 241 CSRLLAVDELGASEHRGLIAYPCFLIYCLFSMLVMF 267
           CS L+     G  EHRGLI+Y CFLIY LFS+LV+F
Sbjct: 241 CSNLVVSLADGGEEHRGLISYACFLIYTLFSLLVIF 257

The following BLAST results are available for this feature:
BLAST of Spo25714.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902164780|gb|KNA07004.1|1.4e-144100.hypothetical protein SOVF_1758... [more]
gi|902162752|gb|KNA06727.1|7.6e-13896.2hypothetical protein SOVF_1783... [more]
gi|731340470|ref|XP_010681411.1|5.6e-11785.7PREDICTED: protein YIPF5 homol... [more]
gi|729470243|ref|XP_010527322.1|1.8e-7560.0PREDICTED: protein YIPF5 homol... [more]
gi|225464142|ref|XP_002265566.1|5.0e-7357.4PREDICTED: protein YIPF5 homol... [more]
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BLAST of Spo25714.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QID2_SPIOL9.9e-145100.Protein YIPF OS=Spinacia olera... [more]
A0A0K9QHJ1_SPIOL5.3e-13896.2Protein YIPF OS=Spinacia olera... [more]
A0A0J8C4H8_BETVU3.9e-11785.7Protein YIPF OS=Beta vulgaris ... [more]
F6HVQ5_VITVI3.5e-7357.4Protein YIPF OS=Vitis vinifera... [more]
M4CM48_BRARP1.3e-7257.2Protein YIPF OS=Brassica rapa ... [more]
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BLAST of Spo25714.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YIPF7_BOVIN3.5e-2637.3Protein YIPF7 OS=Bos taurus GN... [more]
YIPF5_DICDI6.0e-2640.3Protein YIPF5 homolog OS=Dicty... [more]
YIPF5_XENTR1.1e-2436.2Protein YIPF5 OS=Xenopus tropi... [more]
YIPF7_MOUSE1.9e-2433.7Protein YIPF7 OS=Mus musculus ... [more]
YIPF5_MACFA2.8e-2336.3Protein YIPF5 OS=Macaca fascic... [more]
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BLAST of Spo25714.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G36300.13.7e-7456.3Integral membrane Yip1 family ... [more]
AT3G52760.18.5e-7153.2Integral membrane Yip1 family ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 104..235
score: 1.1
NoneNo IPR availablePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 1..266
score: 3.3E
NoneNo IPR availablePANTHERPTHR21236:SF8INTEGRAL MEMBRANE YIP1 FAMILY PROTEINcoord: 1..266
score: 3.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010218 response to far red light
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009932 cell tip growth
biological_process GO:0071555 cell wall organization
biological_process GO:0055070 copper ion homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0017148 negative regulation of translation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009657 plastid organization
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0065007 biological regulation
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016573 histone acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009853 photorespiration
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0009056 catabolic process
biological_process GO:0044248 cellular catabolic process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0001101 response to acid chemical
biological_process GO:0009725 response to hormone
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0006950 response to stress
biological_process GO:0048767 root hair elongation
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0012505 endomembrane system
cellular_component GO:0044428 nuclear part
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0016020 membrane
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0000123 histone acetyltransferase complex
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression