Spo25803 (gene)

Overview
NameSpo25803
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionthioredoxin F2
Locationchr4 : 11583735 .. 11587338 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACAACAAAAAAAAAGAAAAAGATTACAAGAATAACAAGATATTCTAACAGCACATTGCCTAACTACCACAAACTACAAAGAGAAAACAGAACACTCTCTCCCACACACCACATAACACTAACACCAAACCAATTTCACTCTTGTTCAAAATCTTCCAAAAACAGCAAAAAAAAAAAAAAAAAAAACTCCAATTCAATCAAATTCAATGTCTCTCCACCTCTCACTCTCTCATCAATCATGGACATCCCCGGCTCACCCGATCACCTCATCGGATCCAACCCGGAGCTCCGTCCCCGGAACTGGGTTATCGAGGCGGGTCGATTTTCTTGGGAGTTGTAAGAGTAATGGAGTTTCTGTTATTAAGAGAAAAGATAGAAGAATAATGAGAGGTGGTGAAGTTAGAGCAAGTATGGAACAAGCTTTGGGTACCCAAGAAATGGAAGCCATTGTAGGGAAAGTGACTGAAGTTAATAAGGACACTTTTTGGCCTATTGTTAAGGCTGCTGGTGATAAACCTGTTGTTCTTGATATGTTTACTCAATGGTAATATAATTACTCTTAACCCCACAACTTTGTTTATTTTTCAATTGTTATTGGTGATTAGTTTAGTTGGTAGTTTCATCATTTGATTGAATTTGTTAGCTAACTAGATTATTTCCAAGGCTATCAAGTTTAAATTGGATTAGTGGCGGATTTTGAACAGTTTAAGTAACGGGGACTAGTAGAAAAATTAAGCAATGATGGCATGGGGATATACAATTATATTTGGCAATCAACGGTTAGAAGTTAGCTGTAGCGGATTGTATTAGCAGTTTTGAGTAGATGTGTTGTATTAGCTGGTTTGACTAGCTTGTTGTATTAGTTGTGTTAGAAAGTAAGTGTGAGTATTGTGTCCCATATCGGAAGATTAAGCAAAGAGCTTCTAGTTTATAAGCTAAATGTGTTATGTTCATGGGCTTCTGTTTCCTCCTTGTCTCTTGCCAAATTTAGTTGAATATGAATTTCCAATTGAATGGCAACTTAATTGTTATAATTTGGCAAGGTGAAATAAAGACTATTGAGGAATTTATGATTTTTCAAGCATTCCTATTTTGTTAATTATAGCTAAAATCAACAGAATGAGCAGCTAAAAAGTTGGTGATCCTCTGTATACAACTACTGCACTAAAATGTGGTGGATCGAGCTCCAAAATTTTCATAATTGAAGGGTTTTGGGAATTTATTCAAACTTTGGCGGAGCTTGATTTTTGCTCAATAATATGTGATCTTGTTTTGCGTTTATCTTGAATTTGACATACTGTTGTAGTAATGAGGTACTCCTATGTGACTTCAGAAAGAGAGCAGAGTTTATGGCTAAATTTGATTGATGACAATAAGCCAATCATACAGCTAGTTTATTGGCTTAGTATATCCCAAACAGAACGGTTCTCGTTATGTTTTCTTTTCTTTGTAATTTGTGAGATATCTTGATTGCAATCTGCCATTATTAGTAGTTTAGTACTGTACTTTGAATACCTTGTTTAATTTCTGAGATGTTTGGCCTAGGCAGGCTGCCTGGTGATGTCATAAACTCGTACTCCGAATTTCTCTGGATTATCGAATCCATACCAACTTCTGTATCACACAGACATGAGAATTGTATGATTATGTGATAGAAATACTCCTCAATTCACATTCTAAGTTGCCAGCATTTCGATTTGAAAACATTCCCTAATCGTAGTCTATGAGGTCAATACAATCACTTCCGCAGACAAATTTTCTGCTGATGTATTGTATTCAGTAAGAATGTTTGCATGCAAATGCATTCCTCTTCCACTTTCAATCTGCTGTGAATTTTCTGAGCTAGCTTGTTGTGCTCTAATCTTCAGATCTTGTCCTAGTTGTTATTTTTTATACTACTTAATTCACATTCCAAGATGCGGGATTTTCAATTTGAAAACGTTACCTAAACATAGTGTACAATCAGTTATGTGGAGATTTTTTTTATTTTTTTTGCTGATGTACTGTATTCAGTAAGAATGTTTTCGCATTATCTGTTGTGAATTTTCTGAACAAGTTGTGCAGGGTAAACCTGTTGGCTACTTCCACTTCCTGCAATTGTCATGATTCATGAAATTGTTGTGCTCTAATCTTCAGATTGTCCTAGTTGTTGTTTTTTATAATTGTTGTGCTATGTTCTGTTCGACTATTTGGTTTGAACTTATATTATATGAACTTATCTGAACTTATTTTATCTGAAAAAAACTTATTTTGTCTGAAATAAACTTATTTGTGCGTGAAAATGTCCGAATTTTTTTTATTTTTTCTGAACTTAATTGGACTTATGTGAACTTAATTGGACTTATTTGAACTTATTTTTTATGGAAAAAGTCAAAATAAGTCGAACAAAACAAAGCCTAAGCTGTTTCCACCCAACATACTGAAGTCTGAACTCCATCTTGCAAAGTCCACACTGTCATGAAATTGTTGTGATCTTCGAGTTGACATTAATTGTGCTTGAATACAAAGACATCTCTGTGTGCTACATTGCCATATTTTTGCTGTGTTTCATGGAAATGAGTTTTTTTGTTTCCTGCAGTTGTTCATACATTATAATCTGTGATTACTGTAAACAATTTTTCTGTTCAATAAGTTGGCTCTAACTCGTTGTTTTACAAACTGCGAAGGTGTGGACCGTGTAAAGCAATGGCTCCAAAATACGAAAAGCTAGCAGAGGAGTATCTTGATGTCATCTTTCTCAAGCTCGATTGTAACCAGGAAAACAAGGTACTAATTAACCGCGCTATAATCATGTTTTAATCTATAACTTTTTCATCTGCCAAAACAGAATTAGAAACATAATATGGTTTTTGTAAATGTTTACAGACATTAGCAAAGGAATTAGGCATCAGAGTAGTTCCTACTTTCAAGATTCTGAAGGAAAACAGTGTTGTGGGAGAAGTTACAGGGGCAAAATATGATAAATTGCTAGAAGCCATACAAGCTGCTCGAAGTAGTTGATCAAACATTCGATCAAGTGTTTGTGTGTGTATATATGCTGGGTTTGTAAGATCATCCTTGCAACGGGCTCGGGCTCGGGCCAGGGAGTCGGAAAGGAGACACGGTCGAAAATGGCTTGTACTTGGTTGTAACCATTGTGTCTGCTGAGAATCTTGTATGAACAAGGGCTGTAATTGTATATTTCTGTATCAAGTTAAGGAAATCAGAGCACTCTACATGAAGTAGTTCCTATTATTTTCTGTTCCAGTTTTTTTTTTTTTGGTGTGCGCAAATGAGCCACAAGAGCAATATAAACTATAAATGGAAAAGTTGGAATTCGAACCTGTGATCTATCGTACACAGACCCTCAATCTTAACCACTAGGCTAAGACATCATTGGTTCTGTTACGGTTATTGGCAGTTGTAGACTTGCAGTGCAGTTATTAGTTGTGCAGTTGTGCTTGCTTGCCCTGGGCTAGCCACAATCTAAATTATGTTAACATAAACCAACCTAAATTAGTGGTGACACACAATCGATGTACCTATGTTGCACATAAACGACAAAATTCTGCCATGCGCCGTTTCGGAAACGCTCAAAAACAGGGAAACACGTTTCGGAAAGGC

mRNA sequence

GTACAACAAAAAAAAAGAAAAAGATTACAAGAATAACAAGATATTCTAACAGCACATTGCCTAACTACCACAAACTACAAAGAGAAAACAGAACACTCTCTCCCACACACCACATAACACTAACACCAAACCAATTTCACTCTTGTTCAAAATCTTCCAAAAACAGCAAAAAAAAAAAAAAAAAAAACTCCAATTCAATCAAATTCAATGTCTCTCCACCTCTCACTCTCTCATCAATCATGGACATCCCCGGCTCACCCGATCACCTCATCGGATCCAACCCGGAGCTCCGTCCCCGGAACTGGGTTATCGAGGCGGGTCGATTTTCTTGGGAGTTGTAAGAGTAATGGAGTTTCTGTTATTAAGAGAAAAGATAGAAGAATAATGAGAGGTGGTGAAGTTAGAGCAAGTATGGAACAAGCTTTGGGTACCCAAGAAATGGAAGCCATTGTAGGGAAAGTGACTGAAGTTAATAAGGACACTTTTTGGCCTATTGTTAAGGCTGCTGGTGATAAACCTGTTGTTCTTGATATGTTTACTCAATGGTGTGGACCGTGTAAAGCAATGGCTCCAAAATACGAAAAGCTAGCAGAGGAGTATCTTGATGTCATCTTTCTCAAGCTCGATTGTAACCAGGAAAACAAGACATTAGCAAAGGAATTAGGCATCAGAGTAGTTCCTACTTTCAAGATTCTGAAGGAAAACAGTGTTGTGGGAGAAGTTACAGGGGCAAAATATGATAAATTGCTAGAAGCCATACAAGCTGCTCGAAGTAGTTGATCAAACATTCGATCAAGTGTTTGTGTGTGTATATATGCTGGGTTTGTAAGATCATCCTTGCAACGGGCTCGGGCTCGGGCCAGGGAGTCGGAAAGGAGACACGGTCGAAAATGGCTTGTACTTGGTTGTAACCATTGTGTCTGCTGAGAATCTTGTATGAACAAGGGCTGTAATTGTATATTTCTGTATCAAGTTAAGGAAATCAGAGCACTCTACATGAAGTAGTTCCTATTATTTTCTGTTCCAGTTTTTTTTTTTTTGGTGTGCGCAAATGAGCCACAAGAGCAATATAAACTATAAATGGAAAAGTTGGAATTCGAACCTGTGATCTATCGTACACAGACCCTCAATCTTAACCACTAGGCTAAGACATCATTGGTTCTGTTACGGTTATTGGCAGTTGTAGACTTGCAGTGCAGTTATTAGTTGTGCAGTTGTGCTTGCTTGCCCTGGGCTAGCCACAATCTAAATTATGTTAACATAAACCAACCTAAATTAGTGGTGACACACAATCGATGTACCTATGTTGCACATAAACGACAAAATTCTGCCATGCGCCGTTTCGGAAACGCTCAAAAACAGGGAAACACGTTTCGGAAAGGC

Coding sequence (CDS)

ATGTCTCTCCACCTCTCACTCTCTCATCAATCATGGACATCCCCGGCTCACCCGATCACCTCATCGGATCCAACCCGGAGCTCCGTCCCCGGAACTGGGTTATCGAGGCGGGTCGATTTTCTTGGGAGTTGTAAGAGTAATGGAGTTTCTGTTATTAAGAGAAAAGATAGAAGAATAATGAGAGGTGGTGAAGTTAGAGCAAGTATGGAACAAGCTTTGGGTACCCAAGAAATGGAAGCCATTGTAGGGAAAGTGACTGAAGTTAATAAGGACACTTTTTGGCCTATTGTTAAGGCTGCTGGTGATAAACCTGTTGTTCTTGATATGTTTACTCAATGGTGTGGACCGTGTAAAGCAATGGCTCCAAAATACGAAAAGCTAGCAGAGGAGTATCTTGATGTCATCTTTCTCAAGCTCGATTGTAACCAGGAAAACAAGACATTAGCAAAGGAATTAGGCATCAGAGTAGTTCCTACTTTCAAGATTCTGAAGGAAAACAGTGTTGTGGGAGAAGTTACAGGGGCAAAATATGATAAATTGCTAGAAGCCATACAAGCTGCTCGAAGTAGTTGA

Protein sequence

MSLHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKDRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25803.1Spo25803.1mRNA


Homology
[Close]
BLAST of Spo25803.1 vs. NCBI nr
Match: gi|135748|sp|P09856.2|TRXF_SPIOL (RecName: Full=Thioredoxin F-type, chloroplastic; Short=Trx-F; Flags: Precursor)

HSP 1 Score: 369.0 bits (946), Expect = 5.000e-99
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKDRRIM 60
           M+LHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCK NGV V+KRKDRR M
Sbjct: 1   MALHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKINGVFVVKRKDRRRM 60

Query: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120
           RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM
Sbjct: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120

Query: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180
           APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL
Sbjct: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180

Query: 181 LEAIQAARSS 191
           LEAIQAARSS
Sbjct: 181 LEAIQAARSS 190
[Close]
BLAST of Spo25803.1 vs. NCBI nr
Match: gi|731326206|ref|XP_010673902.1| (PREDICTED: thioredoxin F-type, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.9 bits (681), Expect = 2.600e-68
Identity = 138/190 (72.63%), Postives = 161/190 (84.74%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKDRRIM 60
           M+LH+SLSHQSW+SPA+PI+SSDP R  VPGT  SRRV+F GS KS G  +++R DR   
Sbjct: 1   MALHISLSHQSWSSPANPISSSDPARCCVPGTRFSRRVEFGGSSKSIG-GIVRRNDRV-- 60

Query: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120
             G++RASM+  +GTQ +EAIVGKVT+VNKDTFWPIVKAAGDK VVLDM+TQWCGPCKAM
Sbjct: 61  -RGQIRASMD--VGTQ-VEAIVGKVTQVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKAM 120

Query: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180
           APKYEKLAE+ LD++FLKLDCNQENK LAKELGIRVVPTFKILKE  +V EVTGAKYD L
Sbjct: 121 APKYEKLAEDNLDIVFLKLDCNQENKPLAKELGIRVVPTFKILKEGKIVEEVTGAKYDTL 180

Query: 181 LEAIQAARSS 191
           + AIQ  ++S
Sbjct: 181 VAAIQTVQNS 183
[Close]
BLAST of Spo25803.1 vs. NCBI nr
Match: gi|10835722|pdb|1FAA|A (Chain A, Crystal Structure Of Thioredoxin F From Spinach Chloroplast (Long Form))

HSP 1 Score: 241.5 bits (615), Expect = 1.200e-60
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 1 

		  

Query: 69  MEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLA 128
           +E ALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLA
Sbjct: 4   LELALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLA 63

Query: 129 EEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAAR 188
           EEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAAR
Sbjct: 64  EEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAAR 123

Query: 189 S 190
           S
Sbjct: 124 S 124
[Close]
BLAST of Spo25803.1 vs. NCBI nr
Match: gi|10835710|pdb|1F9M|A (Chain A, Crystal Structure Of Thioredoxin F From Spinach Chloroplast (Short Form))

HSP 1 Score: 228.8 bits (582), Expect = 8.000e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

		  

Query: 78  MEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFL 137
           MEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFL
Sbjct: 1   MEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFL 60

Query: 138 KLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 190
           KLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS
Sbjct: 61  KLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 112
[Close]
BLAST of Spo25803.1 vs. NCBI nr
Match: gi|152149372|pdb|2PU9|C (Chain C, Crystal Srtucture Of The Binary Complex Between Ferredoxin: Thioredoxin Reductase And Thioredoxin F)

HSP 1 Score: 223.0 bits (567), Expect = 4.400e-55
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1 

		  

Query: 79  EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLK 138
           EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGP KAMAPKYEKLAEEYLDVIFLK
Sbjct: 1   EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLK 60

Query: 139 LDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 190
           LDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS
Sbjct: 61  LDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 111
[Close]
BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FFX9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074970 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.800e-68
Identity = 138/190 (72.63%), Postives = 161/190 (84.74%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKDRRIM 60
           M+LH+SLSHQSW+SPA+PI+SSDP R  VPGT  SRRV+F GS KS G  +++R DR   
Sbjct: 1   MALHISLSHQSWSSPANPISSSDPARCCVPGTRFSRRVEFGGSSKSIG-GIVRRNDRV-- 60

Query: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120
             G++RASM+  +GTQ +EAIVGKVT+VNKDTFWPIVKAAGDK VVLDM+TQWCGPCKAM
Sbjct: 61  -RGQIRASMD--VGTQ-VEAIVGKVTQVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKAM 120

Query: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180
           APKYEKLAE+ LD++FLKLDCNQENK LAKELGIRVVPTFKILKE  +V EVTGAKYD L
Sbjct: 121 APKYEKLAEDNLDIVFLKLDCNQENKPLAKELGIRVVPTFKILKEGKIVEEVTGAKYDTL 180

Query: 181 LEAIQAARSS 191
           + AIQ  ++S
Sbjct: 181 VAAIQTVQNS 183
[Close]
BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Match: A0A0R0ID39_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G249200 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.300e-47
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQ-SWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSN----GVSVIKRK 60
           M+L+L +S    W S    + S+   RSS            LGSC  N     VS+   +
Sbjct: 1   MALNLCISPNCKWVSSPASLDSASSLRSS------------LGSCFGNINIASVSLSTSR 60

Query: 61  DRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCG 120
              + R G V  S+  +L T      VG+VTEVNKDTFWPIVKAAGDK VVLDM+TQWCG
Sbjct: 61  SLSLRRSGSV--SVRSSLETTGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCG 120

Query: 121 PCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGA 180
           PCK MAPK+++L+E+YLDV+FLKLDCNQEN+ LAKELGI VVPTFKILK+N VV EVTGA
Sbjct: 121 PCKVMAPKFQELSEKYLDVVFLKLDCNQENRPLAKELGINVVPTFKILKDNKVVKEVTGA 180

Query: 181 KYDKLLEAIQAARSS 191
           KYD L++AI   RSS
Sbjct: 181 KYDDLVDAIDKVRSS 181
[Close]
BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Match: K7LFX8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.300e-47
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQ-SWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSN----GVSVIKRK 60
           M+L+L +S    W S    + S+   RSS            LGSC  N     VS+   +
Sbjct: 56  MALNLCISPNCKWVSSPASLDSASSLRSS------------LGSCFGNINIASVSLSTSR 115

Query: 61  DRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCG 120
              + R G V  S+  +L T      VG+VTEVNKDTFWPIVKAAGDK VVLDM+TQWCG
Sbjct: 116 SLSLRRSGSV--SVRSSLETTGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCG 175

Query: 121 PCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGA 180
           PCK MAPK+++L+E+YLDV+FLKLDCNQEN+ LAKELGI VVPTFKILK+N VV EVTGA
Sbjct: 176 PCKVMAPKFQELSEKYLDVVFLKLDCNQENRPLAKELGINVVPTFKILKDNKVVKEVTGA 235

Query: 181 KYDKLLEAIQAARSS 191
           KYD L++AI   RSS
Sbjct: 236 KYDDLVDAIDKVRSS 236
[Close]
BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Match: A0A0B2R4V2_GLYSO (Thioredoxin F-type, chloroplastic OS=Glycine soja GN=glysoja_004985 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.000e-47
Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQ-SWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSN----GVSVIKRK 60
           M+L+L +S    W S    + S+   RSS            LGSC  N     VS+   +
Sbjct: 1   MALNLCISPNCKWVSSPASLDSASSLRSS------------LGSCFGNINIASVSLSTSR 60

Query: 61  DRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCG 120
              + R G V  S+  +L T      VG+VTEVNKDTFWPIVKAAGDK VVLDM+TQWCG
Sbjct: 61  SLSLRRSGSV--SVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCG 120

Query: 121 PCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGA 180
           PCK MAPK+++L+E+YLDV+FLKLDCNQEN+ LAKELGI+ VPTFKILK+N VV EVTGA
Sbjct: 121 PCKVMAPKFQELSEKYLDVVFLKLDCNQENRPLAKELGIKAVPTFKILKDNKVVKEVTGA 180

Query: 181 KYDKLLEAIQAARSS 191
           KYD L++AI   RSS
Sbjct: 181 KYDDLVDAIDKVRSS 181
[Close]
BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Match: A0A0B2S899_GLYSO (Thioredoxin F-type, chloroplastic OS=Glycine soja GN=glysoja_000980 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.000e-46
Identity = 98/154 (63.64%), Postives = 117/154 (75.97%), Query Frame = 1 

		  

Query: 41  LGSCKSN----GVSVIKRKDRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPI 100
           LGSC  N     VS+   +   + R G V  S+  +L T      VG+VTEVNKDTFWPI
Sbjct: 28  LGSCFGNINIASVSLSTTRSLSLRRSGSV--SVRSSLETAGPTVTVGQVTEVNKDTFWPI 87

Query: 101 VKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV 160
           VKAAGDK VVLDM+TQWCGPCK MAPK+++L+E+YLDV+FLKLDCNQ+N+ LAKELGI+ 
Sbjct: 88  VKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNRPLAKELGIKA 147

Query: 161 VPTFKILKENSVVGEVTGAKYDKLLEAIQAARSS 191
           VPTFKILK+N VV EVTGAKYD L++AI   RSS
Sbjct: 148 VPTFKILKDNKVVKEVTGAKYDDLVDAIDKVRSS 179
[Close]
BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Match: TRXF_SPIOL (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 369.0 bits (946), Expect = 3.100e-101
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKDRRIM 60
           M+LHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCK NGV V+KRKDRR M
Sbjct: 1   MALHLSLSHQSWTSPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKINGVFVVKRKDRRRM 60

Query: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120
           RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM
Sbjct: 61  RGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAM 120

Query: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180
           APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL
Sbjct: 121 APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180

Query: 181 LEAIQAARSS 191
           LEAIQAARSS
Sbjct: 181 LEAIQAARSS 190
[Close]
BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.600e-57
Identity = 122/198 (61.62%), Postives = 145/198 (73.23%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWT-SPAHPITSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIK----RK 60
           M++ LSLSHQSW  S A PITS DP RS        +RV+   +C + G +  K    + 
Sbjct: 1   MAMQLSLSHQSWAKSLASPITSFDPARSP------PKRVELGPNCLNGGATAGKLMREKV 60

Query: 61  DRRIMRGGE---VRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQ 120
             R+   G    V+AS+E A+G  E E +VGKVTEV+KDTFWPI   AGDKPVVLDM+TQ
Sbjct: 61  GERMRMSGRSCCVKASLETAVGA-ESETLVGKVTEVDKDTFWPIANGAGDKPVVLDMYTQ 120

Query: 121 WCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEV 180
           WCGPCK MAPKY++LAE+ LDV+FLKLDCNQENK LAKELGIRVVPTFKILK   +V EV
Sbjct: 121 WCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEV 180

Query: 181 TGAKYDKLLEAIQAARSS 191
           TGAK+DKL+ AI+AARSS
Sbjct: 181 TGAKFDKLVAAIEAARSS 191
[Close]
BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.300e-46
Identity = 108/196 (55.10%), Postives = 135/196 (68.88%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSS-----DPTRSS--VPGTGLSRRVDFLGSCKSNGVSVIK 60
           M L L L+    +    PITS+      P +    +P +G++ ++ F     S G  V+ 
Sbjct: 1   MPLSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFC----SGGGGVLD 60

Query: 61  RKDRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQW 120
              RRI     VR S+E       +   VG+VTEV+KDTFWPIVKAAGDK VVLDM+TQW
Sbjct: 61  -SGRRI-GSCVVRCSLET------VNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQW 120

Query: 121 CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVT 180
           CGPCK +APKY++L+E+Y D++FLKLDCNQ+NK LAKELGIRVVPTFKILK+N VV EVT
Sbjct: 121 CGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVT 180

Query: 181 GAKYDKLLEAIQAARS 190
           GAKY+ LL AI+AARS
Sbjct: 181 GAKYEDLLAAIEAARS 184
[Close]
BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.100e-45
Identity = 98/172 (56.98%), Postives = 120/172 (69.77%), Query Frame = 1 

		  

Query: 20  TSSDPTRSSVPGTGLSRRVDFLGSCKSNGVSVIKRKD-RRIMRGGEVRASMEQALGTQEM 79
           T  D   SS P    S    F  +  S+ +   KR   +R+     +  S+  +L T   
Sbjct: 15  TVFDSASSSKPSLASS----FSTTSFSSSILCSKRVGLQRLSLRRSISVSVRSSLETAGP 74

Query: 80  EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLK 139
              VGKVTEVNKDTFWPIV AAGDK VVLDMFT+WCGPCK +AP YE+L+++YLDV+FLK
Sbjct: 75  TVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLK 134

Query: 140 LDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARSS 191
           LDCNQ+NK+LAKELGI+VVPTFKILK+N +V EVTGAK+D L+ AI   RSS
Sbjct: 135 LDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVRSS 182
[Close]
BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.200e-45
Identity = 92/159 (57.86%), Postives = 115/159 (72.33%), Query Frame = 1 

		  

Query: 32  TGLSRRVDFLGSCKSNGVSVIKRKDRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKD 91
           +G++     +G C    +  +KR D  ++R              Q +   VG+VTEV+KD
Sbjct: 34  SGVATTTRRIGLCS---LDYVKRGDSSVVR-----------CSLQTVNVSVGQVTEVDKD 93

Query: 92  TFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKE 151
           TFWPIVKAAG+K VVLDM+TQWCGPCK +APKY+ L+E+Y DV+FLKLDCN EN+ LAKE
Sbjct: 94  TFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKE 153

Query: 152 LGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARSS 191
           LGIRVVPTFKILK+N VV EVTGAKYD L+ AI+ ARS+
Sbjct: 154 LGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSA 178
[Close]
BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Match: AT5G16400.1 (thioredoxin F2)

HSP 1 Score: 185.3 bits (469), Expect = 3.600e-47
Identity = 108/196 (55.10%), Postives = 135/196 (68.88%), Query Frame = 1 

		  

Query: 1   MSLHLSLSHQSWTSPAHPITSS-----DPTRSS--VPGTGLSRRVDFLGSCKSNGVSVIK 60
           M L L L+    +    PITS+      P +    +P +G++ ++ F     S G  V+ 
Sbjct: 1   MPLSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFC----SGGGGVLD 60

Query: 61  RKDRRIMRGGEVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQW 120
              RRI     VR S+E       +   VG+VTEV+KDTFWPIVKAAGDK VVLDM+TQW
Sbjct: 61  -SGRRI-GSCVVRCSLET------VNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQW 120

Query: 121 CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVT 180
           CGPCK +APKY++L+E+Y D++FLKLDCNQ+NK LAKELGIRVVPTFKILK+N VV EVT
Sbjct: 121 CGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVT 180

Query: 181 GAKYDKLLEAIQAARS 190
           GAKY+ LL AI+AARS
Sbjct: 181 GAKYEDLLAAIEAARS 184
[Close]
BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Match: AT3G02730.1 (thioredoxin F-type 1)

HSP 1 Score: 177.9 bits (450), Expect = 5.700e-45
Identity = 87/126 (69.05%), Postives = 104/126 (82.54%), Query Frame = 1 

		  

Query: 65  VRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKY 124
           VR S+E       +   VG+VTEV+KDTFWPIVKAAG+K VVLDM+TQWCGPCK +APKY
Sbjct: 56  VRCSLET------VNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKY 115

Query: 125 EKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAI 184
           + L+E+Y DV+FLKLDCN +N+ LAKELGIRVVPTFKILK+N VV EVTGAKYD L+ AI
Sbjct: 116 KALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAI 175

Query: 185 QAARSS 191
           + ARS+
Sbjct: 176 ETARSA 175
[Close]
BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Match: AT3G51030.1 (thioredoxin H-type 1)

HSP 1 Score: 72.4 bits (176), Expect = 3.400e-13
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 1 

		  

Query: 105 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 164
           VV+D    WCGPC+ +AP +  LA++  +V+FLK+D   E K++A +  I+ +PTF  LK
Sbjct: 31  VVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD-TDELKSVASDWAIQAMPTFMFLK 90

Query: 165 ENSVVGEVTGAKYDKLLEAI 185
           E  ++ +V GAK D+L   I
Sbjct: 91  EGKILDKVVGAKKDELQSTI 109
[Close]
BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1)

HSP 1 Score: 72.4 bits (176), Expect = 3.400e-13
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 1 

		  

Query: 77  EMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIF 136
           E +A    +   + + F   +K AGD+ V++D +  WCG C+AM PK  K A+E+ +++F
Sbjct: 88  ERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILF 147

Query: 137 LKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTG-----AKYDKLLEAIQ 186
           LK++ + ENK+L K L ++V+P F   +     G+V       AK+ KL EAI+
Sbjct: 148 LKVNFD-ENKSLCKSLNVKVLPYFHFYR--GADGQVESFSCSLAKFQKLREAIE 198
[Close]
BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Match: AT5G42980.1 (thioredoxin 3)

HSP 1 Score: 70.1 bits (170), Expect = 1.700e-12
Identity = 32/91 (35.16%), Postives = 59/91 (64.84%), Query Frame = 1 

		  

Query: 97  VKAAGD--KPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI 156
           +KAA +  K +V+D    WC PC+ +AP +  LA+++LDV+F K+D ++ N T+A+E  +
Sbjct: 20  LKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN-TVAEEFKV 79

Query: 157 RVVPTFKILKENSVVGEVTGAKYDKLLEAIQ 186
           + +PTF  +KE  +   V GA  ++++  ++
Sbjct: 80  QAMPTFIFMKEGEIKETVVGAAKEEIIANLE 109
The following BLAST results are available for this feature:
BLAST of Spo25803.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|135748|sp|P09856.2|TRXF_SPIOL5.0e-9997.3RecName: Full=Thioredoxin F-ty... [more]
gi|731326206|ref|XP_010673902.1|2.6e-6872.6PREDICTED: thioredoxin F-type,... [more]
gi|10835722|pdb|1FAA|A1.2e-6098.3Chain A, Crystal Structure Of ... [more]
gi|10835710|pdb|1F9M|A8.0e-57100.Chain A, Crystal Structure Of ... [more]
gi|152149372|pdb|2PU9|C4.4e-5599.1Chain C, Crystal Srtucture Of ... [more]
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BLAST of Spo25803.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8FFX9_BETVU1.8e-6872.6Uncharacterized protein OS=Bet... [more]
A0A0R0ID39_SOYBN2.3e-4756.4Uncharacterized protein OS=Gly... [more]
K7LFX8_SOYBN2.3e-4756.4Uncharacterized protein OS=Gly... [more]
A0A0B2R4V2_GLYSO4.0e-4755.9Thioredoxin F-type, chloroplas... [more]
A0A0B2S899_GLYSO2.0e-4663.6Thioredoxin F-type, chloroplas... [more]
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BLAST of Spo25803.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TRXF_SPIOL3.1e-10197.3Thioredoxin F-type, chloroplas... [more]
TRXF_MESCR3.6e-5761.6Thioredoxin F-type, chloroplas... [more]
TRXF2_ARATH6.3e-4655.1Thioredoxin F2, chloroplastic ... [more]
TRXF_PEA1.1e-4556.9Thioredoxin F-type, chloroplas... [more]
TRXF_BRANA9.2e-4557.8Thioredoxin F-type, chloroplas... [more]
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BLAST of Spo25803.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G16400.13.6e-4755.1thioredoxin F2[more]
AT3G02730.15.7e-4569.0thioredoxin F-type 1[more]
AT3G51030.13.4e-1342.5thioredoxin H-type 1[more]
AT4G26160.13.4e-1335.9atypical CYS HIS rich thiored... [more]
AT5G42980.11.7e-1235.1thioredoxin 3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 10..186
score: 7.4
IPR012336Thioredoxin-like foldGENE3D3.40.30.10coord: 79..186
score: 3.6
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 69..187
score: 8.29
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 85..185
score: 2.1
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 67..189
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 106..124
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 105..113
score: 3.7E-5coord: 153..164
score: 3.7E-5coord: 113..122
score: 3.
NoneNo IPR availablePANTHERPTHR10438:SF258THIOREDOXIN F1, CHLOROPLASTIC-RELATEDcoord: 10..186
score: 7.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009620 response to fungus
biological_process GO:0032259 methylation
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0032957 inositol trisphosphate metabolic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006000 fructose metabolic process
biological_process GO:0015976 carbon utilization
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0009744 response to sucrose
biological_process GO:0009611 response to wounding
biological_process GO:0016310 phosphorylation
biological_process GO:0043562 cellular response to nitrogen levels
biological_process GO:0016311 dephosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0019530 taurine metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006417 regulation of translation
biological_process GO:0009408 response to heat
biological_process GO:0009410 response to xenobiotic stimulus
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0007165 signal transduction
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0010229 inflorescence development
biological_process GO:0048825 cotyledon development
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0045176 apical protein localization
biological_process GO:0048513 animal organ development
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006646 phosphatidylethanolamine biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006457 protein folding
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0006396 RNA processing
biological_process GO:0006629 lipid metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009658 chloroplast organization
biological_process GO:0010118 stomatal movement
biological_process GO:0010343 singlet oxygen-mediated programmed cell death
biological_process GO:0009414 response to water deprivation
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009640 photomorphogenesis
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006281 DNA repair
biological_process GO:0044237 cellular metabolic process
biological_process GO:0042793 plastid transcription
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0009583 detection of light stimulus
biological_process GO:0010617 circadian regulation of calcium ion oscillation
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0046283 anthocyanin-containing compound metabolic process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0010260 animal organ senescence
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0030154 cell differentiation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009637 response to blue light
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031307 integral component of mitochondrial outer membrane
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005773 vacuole
cellular_component GO:0000786 nucleosome
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005770 late endosome
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009705 plant-type vacuole membrane
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0008194 UDP-glycosyltransferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0003913 DNA photolyase activity
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0004351 glutamate decarboxylase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004834 tryptophan synthase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity
molecular_function GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity
molecular_function GO:0047325 inositol tetrakisphosphate 1-kinase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0051119 sugar transmembrane transporter activity
molecular_function GO:0004306 ethanolamine-phosphate cytidylyltransferase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008483 transaminase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0005543 phospholipid binding
molecular_function GO:0043565 sequence-specific DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo154470.79Barchart | Table
Spo267900.79Barchart | Table
Spo281460.76Barchart | Table
Spo223630.74Barchart | Table
Spo003140.74Barchart | Table
Spo133170.74Barchart | Table
Spo267390.74Barchart | Table
Spo229210.74Barchart | Table
Spo083370.73Barchart | Table
Spo213500.73Barchart | Table
Spo194310.72Barchart | Table
Spo091800.72Barchart | Table
Spo185890.72Barchart | Table
Spo167890.71Barchart | Table
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