Spo25859 (gene)

Overview
NameSpo25859
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCoiled-coil domain-containing protein, putative
Locationchr1 : 13394584 .. 13399627 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATTTCTTATATTTGGATCAACACTCCGGTAATTTGGTAACTCCCTATTTCGCTCTTGCTTCTTCTCCTTGCCGGAGCTCCGATCAGTGTGCTGCGCCGCGCCGCGCCCGCTCGCTCGACGGTATTGCAGAGCACCACTCCCCTGTGCGGAGGAGCTTCCGTTGCCCCTGGCTTCCCTCCGCCGCCTTCGAAGCTGTACAAATCGAAAGAGAAATTCAGGCAAACAACGATGCAAGCAAACAAGTACGGACTGCAAATCAGGGTTCCGAAATCCCAGCAAAAGCAGCAGCAAGCCAGAACATTGGTCCCCAAACCCTCTGCTTTCAACGACGACGACGACGACGATGTGGAGAGAGAAATTTCTCGCCAAGCTGCTAAGAAGAAGTCCAACAAAGAGGTAAGCTCTCTCCCTCTCTTATTTCTTAGGGTTTCGTGATTATCAAAATTGGGGGCAAATTAATGGTTAAAAAGTGTATCATTTGTTTGTAGGTTGAGGATCAGTACAAGAAAGCGTTAGAAGAAGACCCTTCCGTATTTGACTATGATGGTGTTTATGATGATATGAAATCGAAAATGGTTCAGCCGAAAGCCGAAGATAGACAGCAGCGCCAGGTAATTGTCTAATAATTTAGTCATTGTTTTTGGTAATTTGGATTCTATATGTTTAGGGTTTGGGAGGTGTTGTTGAACCTTTAATTGATATATGCAATCTTTTGGGTTACATTGAACAATCTTTTGGTAGGTGTTGTTGAACCGTTATCAATAATTTGACAAGCTCTATTTAGTAGCTAATCATTTGTGGTGGTGTAATTGCTATTTGTCATGAACTTTGCTTTTGCCTTTGGTTCTAGGTTTGATGCTCGCAGTCTAGCTAATGTATGGGGGCACTTTGAGTTTTCCGTTTAGACCAAAATCATTTGTTTCAGAAAATGGTTAGGCTGAACACTGGGGCTCATATCTTTGTTGGTTACTTTTTGTGGAGGTATAAGTAGGAAGTTTGTTAATCATGCTGTCATTTGGTTGATTGTGGGCATGGAAATTGTCTGTGGAAATTTCTGCAATAACGCTGCTTCCATTGCCTTTTCTTTTAAAAAAATATTTGTGTGGCTTATAGAATTCTGTTACAACTTTAAGCGGTGCCATCGTTTGAGTAAAAAATGTGATCTTTGAGAACTTCGATTTTAGAAGATGTTTGTTTACATTCCCCTATATGCACTCTACACCTAAACTGGAATTCTCATTGTAATGTCTAATCATACTGGTAGAGCACTTGGTTTTCTTGCTTTGCTTGGATCACCATCTGACACAATCAGTAGGCATGTTTGGTTATGTTGAGGGTATAGGGTGGGGAGTCTTGCCCTAACTTTTAACCATTTAGAGAGAATGATGTATTGAGACACAATGAACTTGTAACTCTGATGTTGTTTGACTTGATTCTTCAAGTTTTACATATTTTATTTTTGGAACTTTATCTTTCCTCTACTGCTTTGACCGGTATATAAATAAGCTAAAGGCGCATCAAGGTGATATGGGTCTTGTTGCTCCTAGGTGCGCTTCACTTGCGCTTCATCCCATGCCCCTCGTGCGCTTTAAGTGTACTTCATGCGCCTCAGGTGTGCTTCTTTGAATGCACTTCACCTAGAACTAAAAAAGCGCTTACCCCCTATCGCGAGCGCTTCAGCGCTTTAGGCACGCTTTTTCATACACCGCCTTTGACTCACCAATTAACCGTCTATCCCTCTTTCTAACCAATCTTTGACCTGTCCTTCTCCAATCTCTGCTTGTATGAACCTGTTATTTCTTGGTTATTTTGAAATATAAATTCAACCTTTGACCTTTCTTCTGATGCTTTAAATTTAAATATTTTAGCCAAAATACATACAAGCGCTGATGGAGAAAGCCAAAAAACGGGAAAGAGAACATGAGGTTGTTTATGAGAGGAAGCTTGCAAAAGAAAGAAACAAAGAGGATCACCTTTATGCAGATAAAGACAAGTTTGTCACCGGTGCTTACAAAAGGAAGCTTGCTGAGCAGGAGAAATGGATGGAGGAAGAACGCTTGCGTGAGTTACGTGAAGAGAAGGATAATGTAAGTTTTTGTCTTTGCTTTTTGATCTTTGTAGAGTATACGTGCGCTTGTTAAAATTGTGACCCCAACTTGATTTGCCACATTCAAAATGATTATGGTAGCAAGAATGCAAGATGCCTTATCAGTTATCACATGGAATGCATAACAACAAGCTTAGTAGTTTATTATAGTTGGTACTGAAATCTCAAGGAGTAACATATTGCCTTGTCTAATCCACCCATATGACTTTATTGTATTATGAGTTTTATTGTAAAGAGTACAATGTATTACTGGTGAAGTATAAAACAATCTATTATGAATTCTAAAAGATTAAATGCAGAAGAAACAGTCAGTGTTAAAACTGAATCATAATAACTTAGTACCCTATCATATTTATAAGCTTACAATGGCGAAGTAACTGAAAATAACTTTCTATGTTAACTACTTCCTCCGTTCTTTTATAATTGCAACATTTGAACTTTCATGTGTGCCAACGAATGGTTTTGACCGTTGTTATTTTTAATTATCTGTTAGTAAATATTATGAATTTTTGGTATTTTGAAAACATACATGACACTTATCCAACACATGACACTTATCCAACAACATATGACTTAAAAACTTTTTATTTTTATTCCTATATGAAACAAATGGCTTGAATGAACTCTTTAACAACAGCAAGGATGCAGTCCGCTCCTCCCACCAACTTTTTCTTTTGACCTTTCAATTTTACAAATCTAGCCTTGGCCTGGTCATCATTTCTGTAATTTTCCTTAATGCTTGTAGCCTTATATCCATTGTCTCAACCCCTAGCTTTTGAGCTCAGTAGTTGTCTAGCCATGCCCCAATTTTAGATTTAGGGTTCGATCTAAACCCTAGATCTGAAAACACCCATTGTTTTTAGGTGCACAATGTCCAATTGGATAACTTTTATGGGACTAGGACGAGTAGAAAGCTGTAGAATACAATAATTCCTTAATTAAAGTAGGTATTAGCAACCAAAAGCAATTTCAAAGGATTTTTCGGTATAAATATGGCCTATCTTGTAGAATGATTCATTATAAAGTTCTTCAATTAATATTCATTATCGAGAACCTTAGCTATTTATGTATTGGACTGTTGGAAGTCATTATATGTTTGCTGATACACTCCTTGTATATTTAGCACATACCCCGTACTTTGTTTCTTTTTGTCTGCACCATTTCTATTTTCATGGTGAACTTTGACCGTACCTTTCTACTTTCATACTTCCTCCTTTTCATTTTAGTGACACCTTCTTTAGGCACGCTGTCCAATGCATGATTTCAACATCAATATCTTTCGTTATCAATATGCAAAGTTATAACATTTGATATTTGAATAAATATATATTAAGACGAATCTAACAAGTCCCCATATGACATCACAAGAAGAAGTCAAAACAACTTATTTGATTAGTGTTAAACTCAAAATGTGTCCATTGATAAGAAAAGGAGGAAGTACAAGCAATATATAAGTATCATCCATGTGGGATCTTGTTAGTTTCGCCACAATATGCACTTTCATCAGTACTCAATATTTTCTTATTTGTTAAAATATGCAAATACATATATTAACGGGAAAAGGTGTGTGTTGGAGTCCTTGGGGATTGAATTTTAAAAAAAGGATGCTACTAAAAACAAAAACGGGAAGTATGTTTTTCAAGGTTAAGAATACCATCTTTTAGATGTGTGGATATTGGATGAACAATCTGTAATGGGAATATGCAGCTTGGTAACTATTTCTTTAAGATCAGCAAATTAGTGTTTTTCCTCAACACTACCATAGCAATTCTCATCTTAGATATTTAGGGCCACTTCCAGAAGTAACCACGAGATTAGTCAAGGGCCTCTGTTGCCTGTCTGTCCAGCCATCAGAAACTATAATCACTCCCGTATCTTTCCATGTACCTTTGTTGGTACTTGGGTTCTAAGTGTATTTGTAAGTGATTTGTTTCCTTTGAATGTTGTGGCTTTGATCCTATTATATCGATGTAACTAGCCAAAATGTGATTCTGTCCATGGATAAAGAAAAACTATTTCAACATCAAAAGCAACAAACTGTAGAGCGATGTGCTGTAATCCTGTTTGCTCTAGTTTTTGTTGTTTTTTATGTTGAAAAGTTAGCAGCATAACATTAATTTAATTAGAGCTCACATTATGTTAGAACTCAGATAATGTACGTTTAAATCAATTTAGAACAACTCATGGACGCAGTTGCATTCGTCATTTGTAATAGATGTAATTGGGACAGATTGCGGCCACCATGGCTTGAAACTTCAAATTACCTAAATTAATTGGTTTTTGAGTTGAAACATTATACTTCTATAGACATAATGTTTCACCGTTACATAACAGACGAGACAGCGAAAAGGGCGTGATTTTAATACTTATGGGGTTTATTCAGAGCGAGAAAGACGTTGTTTTTCTCATTTTTCTATGTGTTTATGCAATTATATTAACATCACTTTTTCTAGGCTTTGTAGTTGTGTTAATATTGTTTGTCTTCTTCGTGTTGCAGGTGACCAAGAAGAGTGACCTAGCAGATTTTTATTTCAACCTATCAAAAAATGTGGCATTTGGTGCTGAGGAAAAGTCCAAGAAGTCAAGTAGAGAAGACAAGGAGCCAGCACCTTCCAGAGAAGAGTTCAAACAACCGGGGAACCCAGAAAAGGAAACAGACTTAAATGAAAGAGTCGTGGGCCATCCGTCCCCCAGCTCAGCGGTAGTCTCACCTTCGAGATTGGATGATAGAGTTAAAGGAGAAGCAGCTGCTGTTGCTCCTGAGGTAAGACAAGACCCATCTGCAAACCCGGCACCTAACCCACCTGCAAACCCGGCACCTAACCCACAACTCGTTGATCAGCCTAAACAGGACCATCATAAGAAAAGTCAGGAAGCTCTTGCAGCGGCCAAAGAACGTTTCTTGGCAAGGAAAAAGGCAAAGATGGATTACTAA

mRNA sequence

CGATTTCTTATATTTGGATCAACACTCCGGTAATTTGGTAACTCCCTATTTCGCTCTTGCTTCTTCTCCTTGCCGGAGCTCCGATCAGTGTGCTGCGCCGCGCCGCGCCCGCTCGCTCGACGGTATTGCAGAGCACCACTCCCCTGTGCGGAGGAGCTTCCGTTGCCCCTGGCTTCCCTCCGCCGCCTTCGAAGCTGTACAAATCGAAAGAGAAATTCAGGCAAACAACGATGCAAGCAAACAAGTACGGACTGCAAATCAGGGTTCCGAAATCCCAGCAAAAGCAGCAGCAAGCCAGAACATTGGTCCCCAAACCCTCTGCTTTCAACGACGACGACGACGACGATGTGGAGAGAGAAATTTCTCGCCAAGCTGCTAAGAAGAAGTCCAACAAAGAGCCAAAATACATACAAGCGCTGATGGAGAAAGCCAAAAAACGGGAAAGAGAACATGAGGTTGTTTATGAGAGGAAGCTTGCAAAAGAAAGAAACAAAGAGGATCACCTTTATGCAGATAAAGACAAGTTTGTCACCGGTGCTTACAAAAGGAAGCTTGCTGAGCAGGAGAAATGGATGGAGGAAGAACGCTTGCGTGAGTTACGTGAAGAGAAGGATAATGTGACCAAGAAGAGTGACCTAGCAGATTTTTATTTCAACCTATCAAAAAATGTGGCATTTGGTGCTGAGGAAAAGTCCAAGAAGTCAAGTAGAGAAGACAAGGAGCCAGCACCTTCCAGAGAAGAGTTCAAACAACCGGGGAACCCAGAAAAGGAAACAGACTTAAATGAAAGAGTCGTGGGCCATCCGTCCCCCAGCTCAGCGGTAGTCTCACCTTCGAGATTGGATGATAGAGTTAAAGGAGAAGCAGCTGCTGTTGCTCCTGAGGTAAGACAAGACCCATCTGCAAACCCGGCACCTAACCCACCTGCAAACCCGGCACCTAACCCACAACTCGTTGATCAGCCTAAACAGGACCATCATAAGAAAAGTCAGGAAGCTCTTGCAGCGGCCAAAGAACGTTTCTTGGCAAGGAAAAAGGCAAAGATGGATTACTAA

Coding sequence (CDS)

ATGCAAGCAAACAAGTACGGACTGCAAATCAGGGTTCCGAAATCCCAGCAAAAGCAGCAGCAAGCCAGAACATTGGTCCCCAAACCCTCTGCTTTCAACGACGACGACGACGACGATGTGGAGAGAGAAATTTCTCGCCAAGCTGCTAAGAAGAAGTCCAACAAAGAGCCAAAATACATACAAGCGCTGATGGAGAAAGCCAAAAAACGGGAAAGAGAACATGAGGTTGTTTATGAGAGGAAGCTTGCAAAAGAAAGAAACAAAGAGGATCACCTTTATGCAGATAAAGACAAGTTTGTCACCGGTGCTTACAAAAGGAAGCTTGCTGAGCAGGAGAAATGGATGGAGGAAGAACGCTTGCGTGAGTTACGTGAAGAGAAGGATAATGTGACCAAGAAGAGTGACCTAGCAGATTTTTATTTCAACCTATCAAAAAATGTGGCATTTGGTGCTGAGGAAAAGTCCAAGAAGTCAAGTAGAGAAGACAAGGAGCCAGCACCTTCCAGAGAAGAGTTCAAACAACCGGGGAACCCAGAAAAGGAAACAGACTTAAATGAAAGAGTCGTGGGCCATCCGTCCCCCAGCTCAGCGGTAGTCTCACCTTCGAGATTGGATGATAGAGTTAAAGGAGAAGCAGCTGCTGTTGCTCCTGAGGTAAGACAAGACCCATCTGCAAACCCGGCACCTAACCCACCTGCAAACCCGGCACCTAACCCACAACTCGTTGATCAGCCTAAACAGGACCATCATAAGAAAAGTCAGGAAGCTCTTGCAGCGGCCAAAGAACGTTTCTTGGCAAGGAAAAAGGCAAAGATGGATTACTAA

Protein sequence

MQANKYGLQIRVPKSQQKQQQARTLVPKPSAFNDDDDDDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADFYFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVVSPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAAAKERFLARKKAKMDY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25859.1Spo25859.1mRNA


Homology
[Close]
BLAST of Spo25859.1 vs. NCBI nr
Match: gi|902226883|gb|KNA20516.1| (hypothetical protein SOVF_051690 [Spinacia oleracea])

HSP 1 Score: 442.6 bits (1137), Expect = 5.100e-121
Identity = 253/315 (80.32%), Postives = 263/315 (83.49%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKPSA----------------------------- 60
           MQANKYGLQIRVPKSQQKQQQARTLVPKPSA                             
Sbjct: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKPSAFNDDDDDDVEREISRQAAKKKSNKEVEDQ 60

Query: 61  ----FNDDDD--------DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYE 120
                 +D          DD++ ++ +  A+ +  ++PKYIQALMEKAKKREREHEVVYE
Sbjct: 61  YKKALEEDPSVFDYDGVYDDMKSKMVQPKAEDRQQRQPKYIQALMEKAKKREREHEVVYE 120

Query: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180
           RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF
Sbjct: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180

Query: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240
           YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV
Sbjct: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240

Query: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 275
           SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA
Sbjct: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 300
[Close]
BLAST of Spo25859.1 vs. NCBI nr
Match: gi|731344524|ref|XP_010683467.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 265.4 bits (677), Expect = 1.100e-67
Identity = 168/313 (53.67%), Postives = 205/313 (65.50%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKP------------------------------- 60
           MQ  KYGLQIR PKS+QK QQ R  VPKP                               
Sbjct: 1   MQEKKYGLQIRAPKSKQKNQQTRASVPKPFCFNDDDGDDVEGEISRQATKNKSLKDVEEQ 60

Query: 61  --SAFNDDDD--------DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYE 120
              A  +D          D+++ ++    A+ +  ++PKYIQ L EKA++REREHEVVYE
Sbjct: 61  YKKALEEDPSVFDYDGVYDEMKSKVVEPKAQDRQQRQPKYIQILKEKAQRREREHEVVYE 120

Query: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180
           RKLAKER K+DHL+ADKDKFVTGAYKRKLAEQ +W+EEERLRELREE+D+VTKKSDL DF
Sbjct: 121 RKLAKERTKDDHLFADKDKFVTGAYKRKLAEQARWIEEERLRELREERDDVTKKSDLTDF 180

Query: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240
           YFNL+KNVAFGA EKSKK  R++KEP   +EE K    PEK+ + N     H S SSAV 
Sbjct: 181 YFNLAKNVAFGASEKSKKPGRDEKEPTAVKEELKNQEKPEKDPESNPSPTEHLSTSSAVA 240

Query: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 273
           S SRL+DR  G+  +V   + ++  ANPAP+   +   NP   +Q KQDHHKKS++ALAA
Sbjct: 241 SSSRLEDR--GQEPSVVSNISRELVANPAPH--TSTETNPPPTNQAKQDHHKKSEDALAA 300
[Close]
BLAST of Spo25859.1 vs. NCBI nr
Match: gi|225464834|ref|XP_002271014.1| (PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 1.500e-48
Identity = 143/314 (45.54%), Postives = 185/314 (58.92%), Query Frame = 1 

		  

Query: 5   KYGLQIRVPKSQQKQQQARTLVPKP---------------------------------SA 64
           KYGLQ+RVP SQQK+Q  R  +P P                                  A
Sbjct: 3   KYGLQLRVPPSQQKKQPTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIEEQHKKA 62

Query: 65  FNDD----DDDDVEREIS----RQAAKKKSNKEPKYIQALMEKAKKREREHEVVYERKLA 124
             +D    D DDV  E+     R  A+ +  ++PKYIQ L+EKAK+REREHE++YE+KL 
Sbjct: 63  LEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEIIYEKKLV 122

Query: 125 KERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADFYFNL 184
           KER+K+D LYADKDKF+TGAYK+KLAEQ KW+EEERLRELREEKD+VTKKSDL+DFY+NL
Sbjct: 123 KERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDFYYNL 182

Query: 185 SKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETD-LNERVVGHPSPSSAVVSPS 244
           SKNVAFG  E +K   RE+K  A + E+     N   ++  +NE   GH        +PS
Sbjct: 183 SKNVAFGGIE-AKLRKREEKVDADTSEKGSSSTNTHTDSSVINEGHEGHEGHEGKTSTPS 242

Query: 245 R-----LDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEAL 272
           +     LD +   +A+A    + ++                  L  QPK DHHK+S++A+
Sbjct: 243 KESSQSLDIKPVSDASAQEKALAEE-----------------TLAQQPKSDHHKRSEDAV 298
[Close]
BLAST of Spo25859.1 vs. NCBI nr
Match: gi|460411382|ref|XP_004251091.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Solanum lycopersicum])

HSP 1 Score: 194.5 bits (493), Expect = 2.400e-46
Identity = 144/320 (45.00%), Postives = 190/320 (59.38%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQ-ARTLVPK------------------------------- 60
           M+ + YGLQ+RVP SQQK++Q AR   PK                               
Sbjct: 1   MKKSGYGLQLRVPPSQQKKKQPARPPPPKALGFGDGDDDDVEKEISRHASKNKALKDIEE 60

Query: 61  ---------PSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVY 120
                    PS F+ D   DD++ +  +  A+ +  ++PKYIQ LMEKAK+REREHEV+Y
Sbjct: 61  QHKKALEEDPSVFDYDGVYDDMKVKAVQPRAQDREERKPKYIQMLMEKAKQREREHEVIY 120

Query: 121 ERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLAD 180
           ERK+AKER+K+DHL+ADKDKFVT AYKRKL EQ KW+EEERLRELREE+D+VTKK+D++D
Sbjct: 121 ERKIAKERSKDDHLFADKDKFVTAAYKRKLQEQAKWLEEERLRELREERDDVTKKTDISD 180

Query: 181 FYFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERV-----VGHPS 240
           FYF+L KNVAFG E KSKK+    +  A   EE     NP    D++  +          
Sbjct: 181 FYFSLQKNVAFGGEGKSKKAVNHHEPEAVQTEE-----NPSSSADVHSHMSREIKTQDHE 240

Query: 241 PSSAVVSPSRLDDR--VKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHK 272
           PS +     R D    +K  +A ++ +  +  +++  P     PA +    DQPK DHHK
Sbjct: 241 PSVSPPCKERTDGAADMKPPSAGLSEKRAEKLTSDNVPTTTTEPAAS----DQPKVDHHK 300
[Close]
BLAST of Spo25859.1 vs. NCBI nr
Match: gi|697094558|ref|XP_009606905.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Nicotiana tomentosiformis])

HSP 1 Score: 193.7 bits (491), Expect = 4.100e-46
Identity = 134/315 (42.54%), Postives = 186/315 (59.05%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQA-------------------------------------- 60
           M+ + YGLQ+RVP SQQK++Q                                       
Sbjct: 2   MRKSGYGLQLRVPPSQQKKKQGGPTRPPLPTAALGFGDDDDDVEKEISRHASKNKALKDI 61

Query: 61  -----RTLVPKPSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEV 120
                + L   PS F+ D   DD++ +  +  A+ +  ++PKYIQ LMEKAK REREHE+
Sbjct: 62  EEQHKKALEEDPSVFDYDGVYDDMKMKAVQPRAQDREERKPKYIQMLMEKAKVREREHEI 121

Query: 121 VYERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDL 180
           +YERK+AKER+K+DHL+ADKDKFVT AYKRKL EQ KW+EEERLRELREE+D+VTKK+D+
Sbjct: 122 IYERKIAKERSKDDHLFADKDKFVTAAYKRKLQEQAKWLEEERLRELREERDDVTKKADI 181

Query: 181 ADFYFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSS 240
           +DFYFNL KNVAFG E KSK++    ++ A   EE K   +    +D++  +      +S
Sbjct: 182 SDFYFNLQKNVAFGGEGKSKRAENHHEQEAIRTEE-KPSSSANAHSDMSREIKRQDHEAS 241

Query: 241 AVVSPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEA 272
           A  SP R +   + +    +  + ++ +  PA +            DQPK DHHK++Q+A
Sbjct: 242 A--SPPRKERTDRADIKPHSDGLSEEGAVKPASDNGLTAVTESAASDQPKVDHHKRNQDA 301
[Close]
BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLX5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_051690 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.500e-121
Identity = 253/315 (80.32%), Postives = 263/315 (83.49%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKPSA----------------------------- 60
           MQANKYGLQIRVPKSQQKQQQARTLVPKPSA                             
Sbjct: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKPSAFNDDDDDDVEREISRQAAKKKSNKEVEDQ 60

Query: 61  ----FNDDDD--------DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYE 120
                 +D          DD++ ++ +  A+ +  ++PKYIQALMEKAKKREREHEVVYE
Sbjct: 61  YKKALEEDPSVFDYDGVYDDMKSKMVQPKAEDRQQRQPKYIQALMEKAKKREREHEVVYE 120

Query: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180
           RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF
Sbjct: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180

Query: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240
           YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV
Sbjct: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240

Query: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 275
           SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA
Sbjct: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 300
[Close]
BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C361_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g156830 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.700e-68
Identity = 168/313 (53.67%), Postives = 205/313 (65.50%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQARTLVPKP------------------------------- 60
           MQ  KYGLQIR PKS+QK QQ R  VPKP                               
Sbjct: 1   MQEKKYGLQIRAPKSKQKNQQTRASVPKPFCFNDDDGDDVEGEISRQATKNKSLKDVEEQ 60

Query: 61  --SAFNDDDD--------DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYE 120
              A  +D          D+++ ++    A+ +  ++PKYIQ L EKA++REREHEVVYE
Sbjct: 61  YKKALEEDPSVFDYDGVYDEMKSKVVEPKAQDRQQRQPKYIQILKEKAQRREREHEVVYE 120

Query: 121 RKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADF 180
           RKLAKER K+DHL+ADKDKFVTGAYKRKLAEQ +W+EEERLRELREE+D+VTKKSDL DF
Sbjct: 121 RKLAKERTKDDHLFADKDKFVTGAYKRKLAEQARWIEEERLRELREERDDVTKKSDLTDF 180

Query: 181 YFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERVVGHPSPSSAVV 240
           YFNL+KNVAFGA EKSKK  R++KEP   +EE K    PEK+ + N     H S SSAV 
Sbjct: 181 YFNLAKNVAFGASEKSKKPGRDEKEPTAVKEELKNQEKPEKDPESNPSPTEHLSTSSAVA 240

Query: 241 SPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEALAA 273
           S SRL+DR  G+  +V   + ++  ANPAP+   +   NP   +Q KQDHHKKS++ALAA
Sbjct: 241 SSSRLEDR--GQEPSVVSNISRELVANPAPH--TSTETNPPPTNQAKQDHHKKSEDALAA 300
[Close]
BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Match: A5ACY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01150 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.100e-48
Identity = 143/314 (45.54%), Postives = 185/314 (58.92%), Query Frame = 1 

		  

Query: 5   KYGLQIRVPKSQQKQQQARTLVPKP---------------------------------SA 64
           KYGLQ+RVP SQQK+Q  R  +P P                                  A
Sbjct: 3   KYGLQLRVPPSQQKKQPTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIEEQHKKA 62

Query: 65  FNDD----DDDDVEREIS----RQAAKKKSNKEPKYIQALMEKAKKREREHEVVYERKLA 124
             +D    D DDV  E+     R  A+ +  ++PKYIQ L+EKAK+REREHE++YE+KL 
Sbjct: 63  LEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEIIYEKKLV 122

Query: 125 KERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADFYFNL 184
           KER+K+D LYADKDKF+TGAYK+KLAEQ KW+EEERLRELREEKD+VTKKSDL+DFY+NL
Sbjct: 123 KERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDFYYNL 182

Query: 185 SKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETD-LNERVVGHPSPSSAVVSPS 244
           SKNVAFG  E +K   RE+K  A + E+     N   ++  +NE   GH        +PS
Sbjct: 183 SKNVAFGGIE-AKLRKREEKVDADTSEKGSSSTNTHTDSSVINEGHEGHEGHEGKTSTPS 242

Query: 245 R-----LDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHKKSQEAL 272
           +     LD +   +A+A    + ++                  L  QPK DHHK+S++A+
Sbjct: 243 KESSQSLDIKPVSDASAQEKALAEE-----------------TLAQQPKSDHHKRSEDAV 298
[Close]
BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Match: K4DA44_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.700e-46
Identity = 144/320 (45.00%), Postives = 190/320 (59.38%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQ-ARTLVPK------------------------------- 60
           M+ + YGLQ+RVP SQQK++Q AR   PK                               
Sbjct: 1   MKKSGYGLQLRVPPSQQKKKQPARPPPPKALGFGDGDDDDVEKEISRHASKNKALKDIEE 60

Query: 61  ---------PSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVY 120
                    PS F+ D   DD++ +  +  A+ +  ++PKYIQ LMEKAK+REREHEV+Y
Sbjct: 61  QHKKALEEDPSVFDYDGVYDDMKVKAVQPRAQDREERKPKYIQMLMEKAKQREREHEVIY 120

Query: 121 ERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLAD 180
           ERK+AKER+K+DHL+ADKDKFVT AYKRKL EQ KW+EEERLRELREE+D+VTKK+D++D
Sbjct: 121 ERKIAKERSKDDHLFADKDKFVTAAYKRKLQEQAKWLEEERLRELREERDDVTKKTDISD 180

Query: 181 FYFNLSKNVAFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNERV-----VGHPS 240
           FYF+L KNVAFG E KSKK+    +  A   EE     NP    D++  +          
Sbjct: 181 FYFSLQKNVAFGGEGKSKKAVNHHEPEAVQTEE-----NPSSSADVHSHMSREIKTQDHE 240

Query: 241 PSSAVVSPSRLDDR--VKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHHK 272
           PS +     R D    +K  +A ++ +  +  +++  P     PA +    DQPK DHHK
Sbjct: 241 PSVSPPCKERTDGAADMKPPSAGLSEKRAEKLTSDNVPTTTTEPAAS----DQPKVDHHK 300
[Close]
BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Match: A0A059A9X5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00541 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.900e-46
Identity = 141/321 (43.93%), Postives = 190/321 (59.19%), Query Frame = 1 

		  

Query: 5   KYGLQIRVPKSQQKQQQA-----------------------------------------R 64
           KYGLQ+R P SQQ+++Q                                          +
Sbjct: 3   KYGLQLRAPPSQQQKKQPTRPPLPPPAGFRDDDDDGVESEIARQSVKNRALREIEEQHKK 62

Query: 65  TLVPKPSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVYERKL 124
            L   PS F+ D   DD++ +I++  A  +  ++PKYIQ L++KA++R+RE E+VYERKL
Sbjct: 63  ALEEDPSVFDYDGVYDDMKAKIAQPRAMDREERKPKYIQKLLQKAEQRQREQEIVYERKL 122

Query: 125 AKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADFYFN 184
           AKER+KEDHLYADKDKFVTGAYKRKLAEQ KWMEEERLR++REEKD+VTKK DL DFY N
Sbjct: 123 AKERSKEDHLYADKDKFVTGAYKRKLAEQAKWMEEERLRQIREEKDDVTKKKDLTDFYVN 182

Query: 185 LSKNVAFGAEE-KSKKSSREDKEPAPSRE-EFKQPGN------PEK-ETDLNERVVGHPS 244
           L KNVAFGA   +S+K  +  +   P +  E ++P        PEK E  +N  + G  S
Sbjct: 183 LEKNVAFGASAPESRKMEKHAESKKPEKHVELQKPEKHVELQKPEKHEEKMNVNISGEGS 242

Query: 245 P---SSAVVSPSRLDDRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLVDQPKQDHH 272
               +++   PSR+ + ++ EA+  + +  +      A +  A   P P   ++P  DHH
Sbjct: 243 SLITTNSHAEPSRMPEGLQAEASPDSKKSFEAIHEKQATDASAQEKPEPSSSNKPLPDHH 302
[Close]
BLAST of Spo25859.1 vs. ExPASy Swiss-Prot
Match: NSRP1_DANRE (Nuclear speckle splicing regulatory protein 1 OS=Danio rerio GN=nsrp1 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.100e-6
Identity = 52/163 (31.90%), Postives = 91/163 (55.83%), Query Frame = 1 

		  

Query: 34  DDDDDDVEREISRQAAKKK----SNKEPKYIQALMEKAKKREREHEVVYERKLAKERNKE 93
           D+  DD++++  R  + KK     +K+PKYI  L+   ++R++E E   ERK+ KER  E
Sbjct: 74  DNVYDDIQKQ--RLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRDERKIQKEREAE 133

Query: 94  DHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLADFYFN-LSKNV- 153
              +ADK+ FVT AY++KL E+++ +E E+     E   +V K+ DL+ FY + L++ V 
Sbjct: 134 GEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSGFYRHFLNQTVG 193

Query: 154 -------AFGAEEKSKKSSREDKEPAPSREEFKQPGNPEKETD 184
                  +  +EEK+  S+  ++ P+P     ++    E  +D
Sbjct: 194 EEVVPDRSAQSEEKATSSAAAERSPSPESTANRRESEAESHSD 234
[Close]
BLAST of Spo25859.1 vs. TAIR (Arabidopsis)
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 161.4 bits (407), Expect = 8.000e-40
Identity = 118/271 (43.54%), Postives = 170/271 (62.73%), Query Frame = 1 

		  

Query: 18  KQQQARTLVPKPSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEV 77
           ++Q  + L   PSAF+ D+  DD++++      + +  ++P+YIQ LM++A++RE+EHE+
Sbjct: 55  EEQHKKALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEI 114

Query: 78  VYERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDL 137
           VYERKLAKER K++HL++DK+KFVTGAYKRKL EQ+KW+ EERLRELREE+D+VTKK DL
Sbjct: 115 VYERKLAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDL 174

Query: 138 ADFYFNLSKNVAFGA-----------EEKSKKSSREDKEPAPSREEF-KQPGNPEKETDL 197
           +DFYFN+ KNVAFGA           EE+ K    E++  A   EE  K+    EK+   
Sbjct: 175 SDFYFNIGKNVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKS 234

Query: 198 NERVVGHPSPSSAVVSPSRLD--DRVKGEAAAVAPEVRQDPSANPAPNPPANPAPNPQLV 257
            E+ V   SP S     SR    + ++ E A    E+  D +     +        P+ +
Sbjct: 235 PEKEV---SPDSGEFGSSRSKSLEPLEAEQAVSEKEMGSDGTEERKSSIKEAAKEVPKAI 294

Query: 258 DQPKQDHHKKSQEALAAAKERFLARKKAKMD 274
           +       K+ ++A+AAAKERFLARKKAK++
Sbjct: 295 ND-----QKRREDAIAAAKERFLARKKAKIE 317
[Close]
BLAST of Spo25859.1 vs. TAIR (Arabidopsis)
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 138.7 bits (348), Expect = 5.500e-33
Identity = 111/278 (39.93%), Postives = 153/278 (55.04%), Query Frame = 1 

		  

Query: 1   MQANKYGLQIRVPKSQQKQQQARTLV---------------------------------- 60
           ++  KYGLQIR P SQ+KQ  +R L+                                  
Sbjct: 140 VKIKKYGLQIRAP-SQKKQSSSRPLLRTASIFGEDDEENDVEKEISRQASKTKSLKKIEK 199

Query: 61  -------PKPSAFNDDDD-DDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREHEVVY 120
                    PSAF  D+  DD++ E +    + +   + +YIQ +M++A++RE+EHE+VY
Sbjct: 200 QHKKAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREKEHEIVY 259

Query: 121 ERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKSDLAD 180
           ERKLAKER K++HLY+DK+KFVTG +KRKL EQ+KW+EEERLRELREE+D+VTKK+DL++
Sbjct: 260 ERKLAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTKKNDLSE 319

Query: 181 FYFNLSKNVAFGA-----------EEKSKKSSREDKEPAPSREEFKQPGNPEKETDLNER 226
           FY N+ KNVAFGA           +E  K    E+     +R+E K+  +PEKE   +  
Sbjct: 320 FYINIGKNVAFGARDIEAREAGRLKELRKVDRLEELRKEETRKE-KKRKSPEKEVSPDSG 379
[Close]
BLAST of Spo25859.1 vs. TAIR (Arabidopsis)
Match: AT1G55928.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 129.0 bits (323), Expect = 4.400e-30
Identity = 86/177 (48.59%), Postives = 121/177 (68.36%), Query Frame = 1 

		  

Query: 18  KQQQARTLVPKPSAFNDD---DDDDVEREISRQAAKKKSNKEPKYIQALMEKAKKREREH 77
           ++Q  + L   P AF  D   DD   E  + R   +++ NK P Y Q + EKA +R++E 
Sbjct: 61  EEQHKKALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNK-PIYNQLMKEKADRRQKER 120

Query: 78  EVVYERKLAKERNKEDHLYADKDKFVTGAYKRKLAEQEKWMEEERLRELREEKDNVTKKS 137
           E+VYERKLAKER KE HL+ D+ K VTG+YKRKL E+++W+ EERLREL EEKD+VTKK 
Sbjct: 121 EIVYERKLAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSEERLRELGEEKDDVTKKK 180

Query: 138 DLADFYFNLSKNVAFGAEE-KSKKSSR-EDKEPAPSREEFKQPGNPEKETDLNERVV 190
           DL+DFYFN+ KNVAFGA + K++++ R +++   P  EE ++    + +T+  ERVV
Sbjct: 181 DLSDFYFNIGKNVAFGARDIKARETERLKEQRKVPKLEELRE----KMKTESPERVV 232
The following BLAST results are available for this feature:
BLAST of Spo25859.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902226883|gb|KNA20516.1|5.1e-12180.3hypothetical protein SOVF_0516... [more]
gi|731344524|ref|XP_010683467.1|1.1e-6753.6PREDICTED: nuclear speckle spl... [more]
gi|225464834|ref|XP_002271014.1|1.5e-4845.5PREDICTED: nuclear speckle spl... [more]
gi|460411382|ref|XP_004251091.1|2.4e-4645.0PREDICTED: nuclear speckle spl... [more]
gi|697094558|ref|XP_009606905.1|4.1e-4642.5PREDICTED: nuclear speckle spl... [more]
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BLAST of Spo25859.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RLX5_SPIOL3.5e-12180.3Uncharacterized protein OS=Spi... [more]
A0A0J8C361_BETVU7.7e-6853.6Uncharacterized protein OS=Bet... [more]
A5ACY7_VITVI1.1e-4845.5Putative uncharacterized prote... [more]
K4DA44_SOLLC1.7e-4645.0Uncharacterized protein OS=Sol... [more]
A0A059A9X5_EUCGR4.9e-4643.9Uncharacterized protein OS=Euc... [more]
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BLAST of Spo25859.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NSRP1_DANRE1.1e-631.9Nuclear speckle splicing regul... [more]
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BLAST of Spo25859.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G27285.18.0e-4043.5Coiled-coil domain-containing ... [more]
AT2G27280.15.5e-3339.9Coiled-coil domain-containing ... [more]
AT1G55928.14.4e-3048.5Coiled-coil domain-containing ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018612Domain of unknown function DUF2040PFAMPF09745DUF2040coord: 20..133
score: 2.1
NoneNo IPR availableunknownCoilCoilcoord: 106..133
scor
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 1..274
score: 3.8
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..274
score: 3.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0009888 tissue development
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0006396 RNA processing
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0010332 response to gamma radiation
biological_process GO:0009909 regulation of flower development
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0010638 positive regulation of organelle organization
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0050832 defense response to fungus
cellular_component GO:0016592 mediator complex
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo025180.70Barchart | Table
Spo039040.65Barchart | Table