Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTTCATTGACGAGGGGTCTATAGATCTGGTGTAGCCGTGACAAATATGATTTCCGTCTGATTCGTCTGATTGTAGTCGAAAGATTGACATCCTCTTCGATCCCGCATACATCTTTACCAAAGAATGGGTACTTACTACACTGAAACTATGTAGTTTTATTGAAATCTAACGCAAAAACACAACAGAATGGAAAGAGATCATATTTTCAACATCTAAATCAGCCAACTATTCAGGTTGATATGGAGTATTATTATTTTTTGGTTCTACTACGAGGAGTTCCCACCGCCTTTGACGAGGTACCTCGATGGGCGGCATCCCTCCCAGTTTAGATTTTTTCCATTCCCAAGGCTCGAACCCTAGACCTTGGTTAAGGAGCAAGAGACCCTTAACCACTAATGTCAATCTCAATTGATTGATATGGAGTATTATAAGATAGCACTCGTAGAGTCATAGCAGCTCGACTCGACTCTGCTCGCCTCGTTTAAACTCTTAGAACCGGGTTTTTTTTCTTATTTTTTTACTTTAAGGATTAGAACCGGGTTTTTAGATGGATAGATCTATCTGCAAATTCAATATCACCGTGTCCCTCCCATACACGCTTCTGATGAATGATGAACTGATGATGACACACTTTCCCAATGTCGCAAAAAAATCTTACCAAAACACCAGCTTGAGGTTGAAGAATAACGAATTTAAGATGGTCAATCTTGCTGCTATGGAGGCGGCGCGTCTTATACCGCGGCGGTTGTGGTGGTGGTCGGGTCAATGGTTTCATCTTATTTCAACGAAGGTATAATTGTTTTTGCTTTTTTTTTTGGTAGTTTTAACACCCAATTACACAATTCTGTACATTGTGAATGGAATTTGTTGAATTCTTAGGTTTGTCGGTGAAAAATCGTTGGATAATTCGGTGATCACGGGGGTGAATTTTGCGGGCTAGGGTTTTGGTTTTTAGTTGTAATGCAATTAATCAATCCCCAAATTGCGGGGTTCATGTTCCATAGATTGCAGATTTACTTGCTTGAGCACCCTCGTCCATTTTTTATATTAAGAAGGAAATGATCTTTTTATTTAGGCTTCCAACCAAAATTGGGGTTGAGGTCTTTGGGCAATTGATATTTAAGTAGAATTTCAATTTAACTTTTCTGAAAATTGAAGATGATGCTTATGCTTATTGATGGTCATACATTGTTCTTGGCAGCATGGTTTTGATGGGAAGTTGAAGGGTGGGTTTACAACAAATTAGGTTCTGAGCAGAAAAATTTGCGATAAGTCAAGCATTCTATTGTTGTCAAAGATGACGAGCAACATCTAAATCAGCCAACTATTTTAAGCAGGTAAGAAAAACTAATGCTTGCAAGTAACTTGCCTTTGATAAGATGATATTTATATACCCTATGCTACAAGTCAGTTAGTTTTTTAACTTTTGCAAGTGCTTGAATGAGGAAGTCTTGGCCTCAAGTGACTTGTGTCCATATGGACACAAGTGACTTGTAATTGGTACCCGCTAATTTGGTATTGGTACTAAGACTAGTATGGTATTGGTATACCAATACATTGCTAAGAAGTACCAATACAAATTATTTGTGTTATTGGTACTGACATAAGTTGTGTTGGTACTAAAAATAATTGTATTTGAGTCACTTGTGTCCATATGGACACAAGCCACTTGAGGTTTAGCAATCCTCGTGCTTGAATACTTTTCTAGTTTTCTGATAAGTTTATAACTTATAAGATTCTAGAATTCAGTAGTCTGAGTCCTTCATTATTGTTTTATCAAGTGCTTTAGTGGGTTGTTACTGAGACGTTTAATGTTCCTTCGAATATCTTTAAACTCTGTGTTAAATAAAAATCGTCAAACCTCGTTAATAAATCATACACTAACCAAAGTTTTTAAGTTCTCTTTTGTTTCTGGTCTTTCGAAGGACTTTCAATTCCAACCAAATCCCTTAATCTCAGCAGAAAGGAAGATAAAGAAAGGGTGACTCCCACCTCATTTCAATATCACTTAGGTACTTAACTTGTCATGTATCACTTAGCTTGTCAGTTGATAGTTTGTTACCACAGCTTGCGTGTATACATTATTGATCGCTGATGAATAAGAAGGCAATAACGCACAACTAATTAATATACTACGTATATAGGAAAGAAAGTTTCTGAAAGTTTCCATTTTAGGCGTCCTGTAAATAAAAATTTGCCAAGCTCATTACCCATTTCTAACAGCATAAGGAGCATATACATGCTATTATAAATACCATGCATACCTTTGTTTCCATCCACCAGTTGTGCGTCAAAATATATTTTTCACCTTATTCTTCATCTTCCTGACATAACACCCATTCTTGATCACACCAGTCTCCTCAACAGATTAGTGCCATAAAGTGGCTCTAGTCTCTAGTTTGAGTCTTGTCCACGTTACTTGGTAAGTTTTCTTTTTATGTAGTATGGCTCAAGTGCTAATTTTGCATTATTTTGGAAAAATCTTCACATAGATGTTAATTGTTATTTGATCTTTCATCCTTATGTTAACTGTTAAGTAGTAGTCATGGAGTAATACTCGTTCCTCTGCTTTGGTAGTCTGGATTCCCTAATAAGTAAAATAGAAACATGGCTGTAATTGAGTTAGACTAATTATTCGGGCCGTCTCCATTGCATGCCTACACTGTTACTAAACTTCATCACAGCATGTGCAAAAACAAACAAAACAAAACGATGCAGTTCTGTTTTTCCACCGTGCATGACTCAGTAAACCATCTTAGGTTCACTGGTTGACTTCTTTTATGCTCATTCTGTGCACAAATTCAGGTACCATTATAGGTGAACGAAACCTATAAATATAGGGTATTTAAAGAATGGGGGCTGATTCTGATCTTTGGTTCGGCTAATAGTTCAAAGTTAGACGATAAAGTAAGGAAGGGCAGTTTTGTTCATATACTCTTTGGAGAAGTTATATAACTGCATTGAAGTCCTAACTCCTAAATGAATATTTATTCATAATGTAGTAGATTTTACCTACGCATTGTTTTATCCCTTAGAAACTGACTTTTATGTTAAATTTAGCTATGTAAAAGAATATCCTTGCTTATCTTTACAGTAACGATAATCAGGTATTATTTAACAAAATTCTCTAGGACATAATTAATCTGTAGCTCATCATGCGGACCTTGGCAAGTTTGGCATTGGATTATTCAGTTAGAGACTTGGAGTGTGAATTTTGTTTAACTTTTTTAATTTTAAATTTAGTACAATATAATTATTTGTAACTTATTAGATTTCAATGTTTTGATACAGGTTTATTGTTGTATTAACTCTACTAGCACAACTTGGACTCTCCATAGGAGATGGTGGTGATGGCCATAATCCCTTCAAATTTCGTGGAATATATGAATGGATTATCCAAGTTTCACTAATATTAGGTATTATTTTAATAGTGATTCTTATATATTTTATTAGATGTACATTTTTGCAAAAAGTACACCACCCACTATCCAACTCCCTAATCTTCCCACCAGCCCAAGCCACTGAAATTTCTAGCCACCCTTCTAATACTCTTTCAGAAACCTATGTCTTACGTAGATTACCGGAAGAGATTTATACGTATTCAACTGAACGTTCTAATGATTTTAGTCATATACTTCGTATATTGTATGATATGCAATTTTCCTTTTGTTGATAAGGGAGAAGCTGTGCATCCATGTTTTTCACTCTCACTATACTAGGTCATGGTTTCCGAAGCACGATTTTCGTTCTACACTGTGCCGTCATGATTATTTTGACGGTTTTGCCGATTACTAATTGGTACAGTGTAAAAAACTATGTTTATATGGTACATGCATAAATGAATTTTATTTTAAATGAAATATTTTAATAAAAATCATAGTTTTTGACTCTGATAAAAATCATAGTTTTTGACTCTGATAAAAATCATAGCTTGTGTAAAACTGTCAATATTTTGTGATTTCAATCCTTGATGTATGAATACCTTGTACGAGTTTACGAAATTGTTAAGTATCGTCACACACCATGGATGCCACAAATGATGTGTTATGTGTGCAACACTTCGTGACTTCGATCTCAAAGGCTGCAAAACCTACGTTGCTTTGCTTGTCTGTGTTGGTGTTCCGTTGCTTTTCTGGTTTCAGGCAAACATTGTCTATCTTTTGTTATGCTATTGGTGTAGCTTTTATGTCCTTTGTAAAACATGTAGGCTGCACCTTTGCTTGGGTTGCAGCTCTATGTTGTAACCTTCGCGTTAATACATTTGTTTCGTGTATAACAAGAATACTTGTGGTGTTTATGGTATCACGGAAGGAGGAAAAACAAGAATGCAAACGTCAATTATCGAGTATTACTGATCGTTGTTTTTATTTCCTCAATTCTGAAAATGTAATTACATTGTAGTACCACCATAGAAGATTGTTCTTCCTAAATTGTCATAATGTTCCCTATCATAGACTCCATAATGCCAATTATCGGTATACTTTTCAGTTTGTTTAGGGCTAATCTTTTGATGGTTTGAATCTAAAACTACAAGACGAGCACAAAATGCAGATAATGTAGCATCTTCAACCGGATAATAACCGTTTCCGATGGGAGGAAGAGGCTGACCAGGTGGGCTATATGCCTCTCCACCAACTGCAATATAAGTCGCGCCATTTGCCAGACCGGTGAATAGCTCTCGTGGCCAATAACCAACAATGGTGTCTGGTTTACCTGGATCGCGTAGTAGAAGCCACCAATGCCCTGTTTTAGGATCCTTTTCAACGTATTATGGGCATTAGTTTAGCA GCCTTCATTGACGAGGGGTCTATAGATCTGGTGTAGCCGTGACAAATATGATTTCCGTCTGATTCGTCTGATTGTAGTCGAAAGATTGACATCCTCTTCGATCCCGCATACATCTTTACCAAAGAATGGGTACTTACTACACTGAAACTATGTAGTTTTATTGAAATCTAACGCAAAAACACAACAGAATGGAAAGAGATCATATTTTCAACATCTAAATCAGCCAACTATTCAGGTTGATATGGAGTATTATTATTTTTTGGTTCTACTACGAGGAGTTCCCACCGCCTTTGACGAGGTACCTCGATGGGCGGCATCCCTCCCAGTTTAGATTTTTTCCATTCCCAAGGCTCGAACCCTAGACCTTGGTTAAGGAGCAAGAGACCCTTAACCACTAATGTCAATCTCAATTGATTGATATGGAGTATTATAAGATAGCACTCGTAGAGTCATAGCAGCTCGACTCGACTCTGCTCGCCTCGTTTAAACTCTTAGAACCGGGTTTTTTTTCTTATTTTTTTACTTTAAGGATTAGAACCGGGTTTTTAGATGGATAGATCTATCTGCAAATTCAATATCACCGTGTCCCTCCCATACACGCTTCTGATGAATGATGAACTGATGATGACACACTTTCCCAATGTCGCAAAAAAATCTTACCAAAACACCAGCTTGAGGTTGAAGAATAACGAATTTAAGATGGTCAATCTTGCTGCTATGGAGGCGGCGCGTCTTATACCGCGGCGGTTGTGGTGGTGGTCGGGTCAATGGTTTCATCTTATTTCAACGAAGCATGGTTTTGATGGGAAGTTGAAGGGTGGGTTTACAACAAATTAGGTTCTGAGCAGAAAAATTTGCGATAAGTCAAGCATTCTATTGTTGTCAAAGATGACGAGCAACATCTAAATCAGCCAACTATTTTAAGCAGGTTTATTGTTGTATTAACTCTACTAGCACAACTTGGACTCTCCATAGGAGATGGTGGTGATGGCCATAATCCCTTCAAATTTCGTGGAATATATGAATGGATTATCCAAGTTTCACTAATATTAGGTATTATTTTAATAGTGATTCTTATATATTTTATTAGATGTACATTTTTGCAAAAAGTACACCACCCACTATCCAACTCCCTAATCTTCCCACCAGCCCAAGCCACTGAAATTTCTAGCCACCCTTCTAATACTCTTTCAGAAACCTATGTCTTACGTAGATTACCGGAAGAGATTTATACGTATTCAACTGAACGTTCTAATGATTTTAGTCATATACTTCGTATATTGTATGATATGCAATTTTCCTTTTGTTGATAAGGGAGAAGCTGTGCATCCATGTTTTTCACTCTCACTATACTAGGTCATGGTTTCCGAAGCACGATTTTCGTTCTACACTGTGCCGTCATGATTATTTTGACGGTTTTGCCGATTACTAATTGGTACAGTGTAAAAAACTATGTTTATATGGTACATGCATAAATGAATTTTATTTTAAATGAAATATTTTAATAAAAATCATAGTTTTTGACTCTGATAAAAATCATAGTTTTTGACTCTGATAAAAATCATAGCTTGTGTAAAACTGTCAATATTTTGTGATTTCAATCCTTGATGTATGAATACCTTGTACGAGTTTACGAAATTGTTAAGTATCGTCACACACCATGGATGCCACAAATGATGTGTTATGTGTGCAACACTTCGTGACTTCGATCTCAAAGGCTGCAAAACCTACGTTGCTTTGCTTGTCTGTGTTGGTGTTCCGTTGCTTTTCTGGTTTCAGGCAAACATTGTCTATCTTTTGTTATGCTATTGGTGTAGCTTTTATGTCCTTTGTAAAACATGTAGGCTGCACCTTTGCTTGGGTTGCAGCTCTATGTTGTAACCTTCGCGTTAATACATTTGTTTCGTGTATAACAAGAATACTTGTGGTGTTTATGGTATCACGGAAGGAGGAAAAACAAGAATGCAAACGTCAATTATCGAGTATTACTGATCGTTGTTTTTATTTCCTCAATTCTGAAAATGTAATTACATTGTAGTACCACCATAGAAGATTGTTCTTCCTAAATTGTCATAATGTTCCCTATCATAGACTCCATAATGCCAATTATCGGTATACTTTTCAGTTTGTTTAGGGCTAATCTTTTGATGGTTTGAATCTAAAACTACAAGACGAGCACAAAATGCAGATAATGTAGCATCTTCAACCGGATAATAACCGTTTCCGATGGGAGGAAGAGGCTGACCAGGTGGGCTATATGCCTCTCCACCAACTGCAATATAAGTCGCGCCATTTGCCAGACCGGTGAATAGCTCTCGTGGCCAATAACCAACAATGGTGTCTGGTTTACCTGGATCGCGTAGTAGAAGCCACCAATGCCCTGTTTTAGGATCCTTTTCAACGTATTATGGGCATTAGTTTAGCA ATGGATAGATCTATCTGCAAATTCAATATCACCGTGTCCCTCCCATACACGCTTCTGATGAATGATGAACTGATGATGACACACTTTCCCAATGTCGCAAAAAAATCTTACCAAAACACCAGCTTGAGGTTGAAGAATAACGAATTTAAGATGGTCAATCTTGCTGCTATGGAGGCGGCGCGTCTTATACCGCGGCGGTTGTGGTGGTGGTCGGGTCAATGGTTTCATCTTATTTCAACGAAGCATGGTTTTGATGGGAAGTTGAAGGGTGGGTTTACAACAAATTAG MDRSICKFNITVSLPYTLLMNDELMMTHFPNVAKKSYQNTSLRLKNNEFKMVNLAAMEAARLIPRRLWWWSGQWFHLISTKHGFDGKLKGGFTTN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25987.1 vs. NCBI nr
Match: gi|902198746|gb|KNA13784.1| (hypothetical protein SOVF_113680 [Spinacia oleracea]) HSP 1 Score: 101.3 bits (251), Expect = 9.600e-19 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 1
BLAST of Spo25987.1 vs. NCBI nr
Match: gi|902198745|gb|KNA13783.1| (hypothetical protein SOVF_113670, partial [Spinacia oleracea]) HSP 1 Score: 82.4 bits (202), Expect = 4.600e-13 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 1
BLAST of Spo25987.1 vs. NCBI nr
Match: gi|902198747|gb|KNA13785.1| (hypothetical protein SOVF_113690 [Spinacia oleracea]) HSP 1 Score: 73.9 bits (180), Expect = 1.600e-10 Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Spo25987.1 vs. NCBI nr
Match: gi|902130998|gb|KNA04227.1| (hypothetical protein SOVF_201670 [Spinacia oleracea]) HSP 1 Score: 60.1 bits (144), Expect = 2.500e-6 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
BLAST of Spo25987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4B3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113680 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.700e-19 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 1
BLAST of Spo25987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2P5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_113670 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.200e-13 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 1
BLAST of Spo25987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2Q2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113690 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.100e-10 Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Spo25987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAB8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_201670 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.700e-6 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25987.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Spo25987.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Spo25987.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo25987.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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