Spo26019 (gene) | SpinachBase

Overview


Name	Spo26019
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	chr6 : 40556615 .. 40565724 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCGGGTGATCGAAAACGCGATCATTCCTAACAAGTTTAGCCACAATCACCCATAAACCAACAAACAATGTTCCAACAACAAATTCTCAATTTTTTATCCCACTCTAAACTAGCCAACTCCCACCAAACGCATCGTCAAAGAGATTAACCGGTCATACTTAATTATTCATTGTAAGTTCGTCCAATTCACCTGCAAAATTGGAAGAACACAAAACTCAAAGCTCAAAAATCTGAAGACTTCATCCATGGATTCCGCACAGAACGCGGCAGCAGGAAACAATGGCGTGGTAAATGCACAAGGAAACAATAACAACAGTACCAACAACGAAGGAGCAACCTCGGATGATGCGAAGCAAAACCTAAGTGACGTCACCAACTCCATTGAAAAAACTTTGGGTCTTCTTCATCAGCTTTATCTCACTGTTTCTTCCTTCAATGTTGCCTCCCAGCTTCCTCTCCTTCAACGCATGTACTCTCTTTCCTAAAAACCCTAATTTACTCTTCGTTTTTCCGATGATTTTTGTTTACTGAAAATTTAGGGTCTTGTTTTGCGTTTTGTTAGAAATTCTCTGGTGACGGAGCTCGATAATATGATGAAATTGTCTGGAAAGTGCAATATTCAGGTTCCCATGGAGATTCTCAAGTCAGTATCCCTCCCCCCCTTTCGCTGTTTTAATTTTGATTTATATGTTTCCTAATTTCTCCCCGTTTTTGGTTAATTTACATTTTTGTTGTGTGCGTTTCGTTAGTTTAATTGATGATGGGAAGAATCCAGATGATTTCACCAAGGATGTTCTTAATAGCTGTATTGCTAAAAATCAGATCACCAAAGGCAAAACTGATGCTTTTAAGGTAAATCGATCATCTCTTTCATATTTTGAACTACTATGGAATTGAAATCCTGCACATGAATGGTATATTATCCCGTTCCGGATTAGTCTGTCCAAATTTGATTGATTTAAGTAGGGATTGGATTTGGATGTTGGTGGGAGAGACCTCTGATCATTTATGACTTGTGCAAATATATAGCAAAACCACTTGTTGATTTATCAGGTTAATGATTATGTCCACTGGTGTGCCGTTACTGAACTGTCATTACTATTTGAATTGTTTGAGGAACACCATTTCACTTGCCTGTATGTGTTTATTTATTCACTCTTTTATTGATTTTTTTTTGTCTCTTCATCATATTCTCTCTTCTGTCATTGGGTTGACATGAGGAAGTGTATTAGATATGACGGGTGTGTATGTCCGTATGGTTATATTTCTAGCTCCCTTTATATCACCTAAAATACACTAAAAGTGAGAATTTTGTAGGGTAAATTTTGAGAATTTTTGGTTGGTTTAGATAATTTGTAGGGTAAATCTGAAATTATAATGAGCTATTCATCCTCTCCAATCCCAAAGCTTGATTACTCAGTCAACACTGAGCTATATAATTAGAAGAGGATCACCATGCTTGTTGGGAAAGTATTTGAAAAGAAAGGTATATTGTTTATATTAATCAAATCTAACTGCACAATATAGTCCAAAGGATCAAATGGTATTTGTATGTTGTACAAACTAAAATGTACAAACTAAAATGTATTAGTAGAAAACAAGCATGGAGTTGACACACTCTGTTTCTAACAGTCTAACCTATGGTTCTTTGTTTACTACAAAAGCGCATTCTATCTGTTTCATTTTACTTGCCACATTGGGCTGTTTTTGAGAGTATATTGGCTCAAATGGGGCAAAAAAAAAGTGTGACAGAGAGAATATATATGTTCCAATAATTTCAGAAAAGATAAGTTCAATTAAGATTTGTTTAGCATAAGCAAGTTCAGATAAGTCAAAATCACTTGAATAGAACACATCTATAAAAACTATAGAACACATATAAAGGTGTATTTTGTTACATATAAAAAGTATGACATCGATGTTTGTAGGTATGACAAGGGGCCAACTTTGGCCTACGCCCGTGTGTGCATCTAGACTTTGCTTTCTTCTCTCTTTATTCACCAAATATGTGACTCTTGTGTGTCTTCTCTGTTTGATGGTTATTTATAAAACTTTGATTAGTAACAACGTTTTTTATTTGGTTTGCAGAGTTTGCGCAAACATATGCTTGAGGAGCTTGATGAAGCTTTTCCCTCTGAAGTGGATGCGTACAGAGATATACGTGCCTCATCTGCCGCTGTAAGTTTGGATATTGTTATGTGTATGCAAACCTTTTTTTTTAAAAATAATTCTTAAATCATTTATGGTGACTAACTTATTGCACAAACTATATTGAGAACTTGTCTGTCTATAATAGCTAGGATGGTAGCTTCATGCCTGTCTTGCTACCAGTATATCTGACCATCTTTTAAATAATTAAGAACTCTATTGAAGGGTTAATGTTTTTATCAGCAATCTGACTGCTAGGCTTCATACAGGAGATGAAAAGGTTGGCCCAAGCCCAGAGTGCACTGCCTAATGGAGATGTGAAGGTCAAGGGTGAGCTATAGGTTCTGATATCTGCAAGCAATCAGGTTTCTTTGTCAGTTACTTTACAATCTGTGTAGCTTTAAGCTGTGTATTTGAGTATCTCCATTCACAATATGGGTGGCAGTTGTATAATGAAGGTTTTTTTTAGCTTAATTGCATCCATTATTTTACTTTTTTTACACGTGATTGCCTGTATGTTGTATCCTTTGCTGTCAATGTCATGTAGTCTTCAACTAGGTCTTCTGTGCATAATACTTGTTAGGAGATGTTAATGAATTATAATATACCATTGTAAGACTGAAACAAGATTAAGAATTATGAGTGCACTTGATTGCTCACATGTTTTATACTGAAGCTTGACATGGTCTTGTGGGAGTTCTAGCATTTGATGTTTTCCTGGTCTGTCTATGATTGAGGTGGATTAAGAATTTTTTTCTTATTTTTTTAAGGGTTTACTTTAAAGTTGCAACAACTTTAGGTCTGTTTGATGTTTATATATTTGTTAAGTATAGTGAGACAAGTGGGGAATGTGAGTGAACCAGGTTGGTGAGGTTAGCTTAGTATCTTGTAGTAAGCCTGTAAGAGTAGAAATTGGGAAAGTTGTTTCGGGGTTTATGAAGGATAGGCTTGTGCATCCCTACACGTTGTTCGTTTTTGGGTAAAACGATAATCTGTTCGATGTGATATAGAATCTTCTTGAGTAACTTGAGGTGTATTTGAGATCTTTACTTCAATTTTTGGTTGTCGCAAGAGTTTTAAATTTAGTAATAATGTAACTGGGTTAAATAATAGTTATGATCCTTACACACTTTGTGGGCATGCTTGTGAGATTGAATACTGTATGGATTACTCAAAGCGGCAATTTTTCCTCAGGTTAGTTATGCAATGATTTTCTTCTTGGCATGCTGGAATAATGTCCTTGTTGCCTCATTGGGTCACTCTATGAATTTTTGAGAATCATATATTGTATTCATTCGATTGGGTTAAGAATGTGTTGAACTGGTTATTAGGATACTTAAAAGTTCCAGTATGGACATTAGGACTCTAAGGCATAGAGTGCTTCTGTTGTCACTGAGATTGTGTTTTGAAGTTTTCTGTGAACAATGCATGAGCTGGGGATAAAATGATGCTTTTTTAATCCAAACTAGCTCTTGACCCCGTTCAAAGAACGACAATTATATAGTGGTTGTTTAGCCGTCTTTTAAAGTTCTAATTTTATTGACGACGTGTGATTTTAGTGGGAAATATATGGTTTAATAGAAGTTGAATTTAAAGGTTGAAAGAATATATAAATTAAATGATGAATTAATGTTAGTGTTAAAGGGGGAGATGGAGTGGAAGAGACTGACTGAATATATTGGACTATCGGTGAATTGATTTTGAATGAGAAAGATGGAAGTAGAAGATCGAGGCGTAGGAGCTGTAAAATATAGTGTAAAAATATAGTAAACAGCAAAAAGAAAAATTGAAAAACAAACCAAGTTGATGAATGAGAGGAGGGGATGACACATCACACATGTCATCTAATCATCCATGGTTCGCTTTTAAAATACTAGGTAGAGATAAAAGATCTTTCATGAGGATGTTGATGATTGATTACAGCTAGTAAATGAGACCTCTGGACATTGGTATGGCTTTGCATGATGGAACTGGGGAACAGATAGAAAGAGATAGGTGAGAGAGAAATCGTCATGAATATTATTGAGGATTTTATTTAGCTTTATTTTTCATTTTGGGAGAGAACAAGCCTCTCGAGTCTTATATTTCCAGTCCTTGTTCTGTTTTCCAGAACTATCAATAAAAATCATCGTCTTCTTTGCTTTAAATATGTCCAAGCTATATCAATTTTTTACAAGATACTCCATTACACACTGTCTCTATAAACCGTCTGATTTCCTGGATTCTAGCATGAAAGAATGTGGAAACAAGGTAACTGAGAAAGCTCATACTTTATTGCTGCGAAGTGGAGCTACATCAAAGAAGAAAATGAAGTAAGTGATATTTCTTTATCCTTCAACCAAGTGCTAGCGCCTACTGATTCTGACAAATTTATAACAAAGCATTCAGTGGTTGTAACAACTTGGCCACAGTGGATTATGCGTTAAGTTTGCCTGTGTTGATGTGTTCTCCTTTGGTGCTGCCATGAGAACTGACGATTAATAACTGTTCTGAGGGAACTTATTCAATGTTTTATGGAAAGCAATATGTAGTAATATGTTTGTTCCTCTCTTGATAAGAAATAATCTTTTTGTCTCAACTCTTAAGCAGTTCTATTGTGAGAGAACCTAGTAGTCGGAAATTCAAAAGGTATTTCTAGAACCTAAGAACTGAATAAGATATCTGATCTAAACAGCTTAGAGCTGGTGGTAAGATAGTAAATTTACAAATTCATTATCTGCGAAGGCGGTAATTTCTCTAGATTGCATGGGCCTTAACTTACTGAAAATTCTCTCGTGCTTGTTAAAATGAGCTTGGTACAGAAAGGAAGGAACATAATCTGTAAAGAAGTATTGAACGACCACATGGCTGTAAAAGGGGAAATGTCAGGGTCGGTCACGTGACTGCATGGCATGCAGGGCGGAAGAAAGAAAGGACATTATATACAAATGACAAGTTTGAGTTTTGCCATTGTTTCCCGAGGAGCCGTACAAATAAAATTCTCGCCTCCTTGGGCCTAGATCGAGGATAGTGAGACGCCTATTATATCAGATGACGATATTTATCGCTCTTGGTTATTGGACCTGGGTGAAAAAGAGATTAGGAATGTGATCATTTATTGAAAAGAAAAAGGTCATCTCTCTCAGCAAGAAAAGAGAGCAGAGCAAGATGTTACTGAAACTCAGATATAATAGCTACTTTTGATAAGGTTAGAGTGAGAACACCGAGGAGGAAAGAGGTGGAGTTTTTGTACTGATAACTAGCAGAGTAAAAAAAATAAGCCAGGTGAGAAATATTTCTCTACCTTTAAACAGACTTGGAAAAAAGACCACCTCTAAGAAGGAAAAAGCACTCCCTTAGAAATTGTGTTTGGTTATATAGAGTATGTTTGGCCAATCTTCTTAAAAACTTTTGTTTCCGTTAAGTAATTTTCTAGAAACAGTTTCAAGAAACAAAAATGTTTGGCCACAAAATTCTAGAAGTGCTTCTAAAAAACGGAAATAGTTTACCTTGTTTTGCCCATTATATTTTATAACTATTTTAAACCATTATCTATATTATTATTTATTATTATAATTATATCATCATCATCTTATTTCCTCAGCCCTTTGATATAATATAGATGGCTCTGATTACGTTAATCAATTTAAGATATAATTTCCCTTTTTTTTCTTTTTAAAATCATGTTCAAATTCTCATCTTTCTCTCTTCTCTAAGAATCCAATCCCACACAGTTCTTGGTTGATAATAGTCTCTTTAATTTTCTTTGTTTCTCTCCATTTTACCATATTTACTGACCACCGTATGGAACACAAGTTTCCAACTAATGGATACCCAAAATTAACCTTCTTCATTATCACGAAGAAGAACTATAGTAGATCCATATTAGATCGACAAAGAGGATAGCTAATTATAGAGCAGTTGGTGCATGGTTGTGGCGGAGCGCGGTCGTAGAGTGATTGGATTCTGATTACTGGGTCGGAGTTTACAAGGAAAAGCAAGAGTTGCCGACGTTGAGGTCCCCAATGAAATTGAGGAGCAAACAAGGTTGGTGGTGTTCAATCTCGGAAGAGATTTGGTGGTGACAATGGAGGGCGTAAGGGGAAAGGTAACAGTACCATGGTTTTAGGTGGGATGTAGGGTCATTTCTAAAACATGAAGGGTATTATGGCACATAGAAAATGATGCATTAAGTTAAATGGCTCCTTGAGAAACAGCTAGAGAAGCTTCAGTTTAGATCTTTTGTTTCTGAGCCCATTAGAAGCTATCTTGGGCTTCTTGAGAATCAGAACTCTTTTTACTTTACCCCCTGTTTGGCCTATTATTTGTTTCTCAAGTGGAGAAGCTGTTCTAGGAGCTTGGCCAAACCTCAGAGTAACCACTTGTCACTTACTCACTTTGGAATTTGGGATATTTGTCTTCTTTTACAGGTCTACTATGTTACAGAATTTTGCATTCCAGGATATATATATACCACAAATTATATAGTGTAATCACTTCAACAACAATGTTATTTGTCATTTTTGTAGGATTAGGTTGTGATCTTAGCTTCTTTTTAGATCCATAAGTCTAGAAGCTTTCCGCGAATTGTCTTTCTCAGATGTAACATTTGATTGATCCTCTGTCTCCCCCCCCCCTTCCCGTAACTGGTGGTCTTGTAGTACCGTAGACTTGTTTGGGATGAGAATAAAAAATAGTTTCGTGTAATGTCAGCAAGATAAATAGCATGTTGAAACGTATCACAATCAGAGAAGGATCTGGTTACTTGGATTTTCTTCCTTGTCTAGAGTGTGTTTTCTACTATTCTAATGGAGTACAAATTTGGTTGCTTGTGTTTTGTGTGAGATCTAATTTTTTTTTTTGTAATATTGTAGCTACCCTTAGGTTAAATATTTTTGACTAATTTGTAGTTAGGTGTAAGATGAGAACAGAGAATTATGGAGCTTTTCTTTTGTATGTTTATTTACAATTACCTTGCTTTTTGATGATGTTTTACTTTGAGTCGTTATTTAGTTTGTTGCATACATGCTGGAAACACGCTGACAAGGGTATATATTTCCTACCCGACACTTCAATTCTCACACAGATACTTCAATTGCTATTGAACCATATATTTGTAGAGGAAAAATTGAAGAAGAAAAGGAACAGGAAGAGAAATAATGTGATATATGCTCAGAAAACGGGTTTCGCATCAATGTTTTAACAAGAACTACCAAGCAAGTCAAAAGGAAATGTTGATTTATGTATTTTTAATGTGAAAAGCACATGTAAGCAGTCTGTTAAAATCAAGAATATGTTAATAAATGTCGTTTCTTGCAACCGTGTCTAATTTTAGGACTTCTCTTGTGTCTGACATATCGAGCTCCAGTGTGTGCCACATACCCCAATCATTTTGGGACTAAGGCTTGGTTGTTGTTGTGTGTACCACATACATATCTCTCATATTTGTGTTTGAATAACTTAGTGTTGAAGGCTCTTTTCTTTGTTCTGTTTTGGGGCTGGGCCATGTGGCATGTTGGCAGTTTTATTGGATAGATAGGAATTCTACGTATCATAGAACCGTTTCAAATTTGTAATAGAGGTAGATGCCCAATCACTATTTATATTGGCTGAAAGCTGCTGAACATAAAACTAAAATTATGTATATAGTAAAAGCTCCACGTTCGCAGACTGTATCAGACCCATAATTCCCACCAGTTTGGGATACAATTATGTTCCATAAGATAGGTTGGTTCTACACTGCTGTAGTTTCTAGATGATGCTAATGAGTCATCTGCTGATTCTATCATGTAGAAGTTTTCTTGGTTGTTTGTCTCCTGCTCAAAACTCTTAAATTCTTCAAATTTATCATTGCACAAAATCTCATCCTGAGTGTAATAATCTTCTGGCTTAGCTATGAGCTTCTCTGGTGAGCTTAAAGAAAAAGATTCTCCGTTACTGCTGCATGTAGCTGGAGCTGAGTCACTTGTGCTGTCTTTAGGTCTTTCTTTTAAACCCCTTAATCGCTGCACCTGCTCAAAAGAGAGATGAAAAACGTGAATACTGGATGTTAGAAACTTAGAACAAGAACCCTTTATCTTTGAAGATTAAGTTCAATTGACTGGTTGACACTATACCTCAATTATCAAGGTCTGATTCTCTTTTTTAAGAACCTCAAACTTAGAGGCAAGACTGTCATAATGAGCTTTCAAGATGCTGTAATCACGCTCTGTCTGTTTTGACTTGCTTCGAGCTCTCCTGTTCTGAAACCATACAGAAACCTGTCGAGGATGAAGTCCGAGCTGGTTAGCAATCCGCTGCTTTGTTTTCGACCCTGGTCTTGATTCTGAATTGAACATCAATTCCAAGGATTTAATTTGCTCGTCACTAAATCTTCTCTTGTTGCAGTTCTTATTTGTTTGCTCCGATGCTACAGGATCAATATCCATACCTGTGGTTCATGTGTGTTTGTGTGTATGTTTTTTCTTTGGCTTTGCAGTTGGCATATAGAATTCTGCTGCTGACAGCAATTTATAGGCTTTTGAGATGGGTGATGCTTTTGGATTAGGAGAGTGTTAGTTCGAGGAAATTTTGGCTCTGATGGATATAGCTGTACTCTTTTACACAAGCAGTAGAGTTTGTGTTTGTGATTGGGTGTGAACCTGTGAAAATAAGGTTTCTCAGTTAAATATATGTATGCCAAATGGATTTCACTAAGATGTTGGGCCCCTGTATTTGATTATGATGTTGGTGCCGTGTCATAGGAGATTCTAGTGGAGTAGGAGAATCTTGTTTGGGACTCCATTAATACACTGTGGCAATCATTTGTGTTGGATAACTCAGAAGTTGGAGAAAACCTTAGCTAAGAGAGTCGATTGTCAATTTTAACACCCCCTATCCTCCTGTTTGTGACGAATGATCCGTGACCATTCACTTCTCGGCCATTTTAGAGATCAAATTATGGAAGGTCCTGTTTGTAACGAATGATCCTTGACCATCCAC

mRNA sequence

ATTGCGGGTGATCGAAAACGCGATCATTCCTAACAAGTTTAGCCACAATCACCCATAAACCAACAAACAATGTTCCAACAACAAATTCTCAATTTTTTATCCCACTCTAAACTAGCCAACTCCCACCAAACGCATCGTCAAAGAGATTAACCGGTCATACTTAATTATTCATTGTAAGTTCGTCCAATTCACCTGCAAAATTGGAAGAACACAAAACTCAAAGCTCAAAAATCTGAAGACTTCATCCATGGATTCCGCACAGAACGCGGCAGCAGGAAACAATGGCGTGGTAAATGCACAAGGAAACAATAACAACAGTACCAACAACGAAGGAGCAACCTCGGATGATGCGAAGCAAAACCTAAGTGACGTCACCAACTCCATTGAAAAAACTTTGGGTCTTCTTCATCAGCTTTATCTCACTGTTTCTTCCTTCAATGTTGCCTCCCAGCTTCCTCTCCTTCAACGCATAAATTCTCTGGTGACGGAGCTCGATAATATGATGAAATTGTCTGGAAAGTGCAATATTCAGGTTCCCATGGAGATTCTCAATTTAATTGATGATGGGAAGAATCCAGATGATTTCACCAAGGATGTTCTTAATAGCTGTATTGCTAAAAATCAGATCACCAAAGGCAAAACTGATGCTTTTAAGAGTTTGCGCAAACATATGCTTGAGGAGCTTGATGAAGCTTTTCCCTCTGAAGTGGATGCGTACAGAGATATACGTGCCTCATCTGCCGCTGAGATGAAAAGGTTGGCCCAAGCCCAGAGTGCACTGCCTAATGGAGATGTGAAGGTCAAGGGTGAGCTATAGGTTCTGATATCTGCAAGCAATCAGGTTTCTTTGTCAGTTACTTTACAATCTGTGTAGCTTTAAGCTGTGTATTTGAGTATCTCCATTCACAATATGGGTGGCAGTTGTATAATGAAGGTTTTTTTTAGCTTAATTGCATCCATTATTTTACTTTTTTTACACGTGATTGCCTGTATGTTGTATCCTTTGCTGTCAATGTCATGTAGTCTTCAACTAGGTCTTCTGTGCATAATACTTGTTAGGAGATGTTAATGAATTATAATATACCATTGTAAGACTGAAACAAGATTAAGAATTATGAGTGCACTTGATTGCTCACATGTTTTATACTGAAGCTTGACATGGTCTTGTGGGAGTTCTAGCATTTGATGTTTTCCTGGTCTGTCTATGATTGAGGTGGATTAAGAATTTTTTTCTTATTTTTTTAAGGGTTTACTTTAAAGTTGCAACAACTTTAGGTCTGTTTGATGTTTATATATTTGTTAAGTATAGTGAGACAAGTGGGGAATGTGAGTGAACCAGGTTGGTGAGGTTAGCTTAGTATCTTGTAGTAAGCCTGTAAGAGTAGAAATTGGGAAAGTTGTTTCGGGGTTTATGAAGGATAGGCTTGTGCATCCCTACACGTTGTTCGTTTTTGGGTAAAACGATAATCTGTTCGATGTGATATAGAATCTTCTTGAGTAACTTGAGGTGTATTTGAGATCTTTACTTCAATTTTTGGTTGTCGCAAGAGTTTTAAATTTAGTAATAATGTAACTGGGTTAAATAATAGTTATGATCCTTACACACTTTGTGGGCATGCTTGTGAGATTGAATACTGTATGGATTACTCAAAGCGGCAATTTTTCCTCAGGTTAGTTATGCAATGATTTTCTTCTTGGCATGCTGGAATAATGTCCTTGTTGCCTCATTGGGTCACTCTATGAATTTTTGAGAATCATATATTGTATTCATTCGATTGGGTTAAGAATGTGTTGAACTGGTTATTAGGATACTTAAAAGTTCCAGTATGGACATTAGGACTCTAAGGCATAGAGTGCTTCTGTTGTCACTGAGATTGTGTTTTGAAGTTTTCTGTGAACAATGCATGAGCTGGGGATAAAATGATGCTTTTTTAATCCAAACTAGCTCTTGACCCCGTTCAAAGAACGACAATTATATAGTGGTTGTTTAGCCGTCTTTTAAAGTTCTAATTTTATTGACGACGTGTGATTTTAGTGGGAAATATATGGTTTAATAGAAGTTGAATTTAAAGGTTGAAAGAATATATAAATTAAATGATGAATTAATGTTAGTGTTAAAGGGGGAGATGGAGTGGAAGAGACTGACTGAATATATTGGACTATCGGTGAATTGATTTTGAATGAGAAAGATGGAAGTAGAAGATCGAGGCGTAGGAGCTGTAAAATATAGTGTAAAAATATAGTAAACAGCAAAAAGAAAAATTGAAAAACAAACCAAGTTGATGAATGAGAGGAGGGGATGACACATCACACATGTCATCTAATCATCCATGGTTCGCTTTTAAAATACTAGGTAGAGATAAAAGATCTTTCATGAGGATGTTGATGATTGATTACAGCTAGTAAATGAGACCTCTGGACATTGGTATGGCTTTGCATGATGGAACTGGGGAACAGATAGAAAGAGATAGGTGAGAGAGAAATCGTCATGAATATTATTGAGGATTTTATTTAGCTTTATTTTTCATTTTGGGAGAGAACAAGCCTCTCGAGTCTTATATTTCCAGTCCTTGTTCTGTTTTCCAGAACTATCAATAAAAATCATCGTCTTCTTTGCTTTAAATATGTCCAAGCTATATCAATTTTTTACAAGATACTCCATTACACACTGTCTCTATAAACCGTCTGATTTCCTGGATTCTAGCATGAAAGAATGTGGAAACAAGGTAACTGAGAAAGCTCATACTTTATTGCTGCGAAGTGGAGCTACATCAAAGAAGAAAATGAAGTAAGTGATATTTCTTTATCCTTCAACCAAGTGCTAGCGCCTACTGATTCTGACAAATTTATAACAAAGCATTCAGTGGTTGTAACAACTTGGCCACAGTGGATTATGCGTTAAGTTTGCCTGTGTTGATGTGTTCTCCTTTGGTGCTGCCATGAGAACTGACGATTAATAACTGTTCTGAGGGAACTTATTCAATGTTTTATGGAAAGCAATATGTAGTAATATGTTTGTTCCTCTCTTGATAAGAAATAATCTTTTTGTCTCAACTCTTAAGCAGTTCTATTGTGAGAGAACCTAGTAGTCGGAAATTCAAAAGGTATTTCTAGAACCTAAGAACTGAATAAGATATCTGATCTAAACAGCTTAGAGCTGGTGGTAAGATAGTAAATTTACAAATTCATTATCTGCGAAGGCGGTAATTTCTCTAGATTGCATGGGCCTTAACTTACTGAAAATTCTCTCGTGCTTGTTAAAATGAGCTTGGTACAGAAAGGAAGGAACATAATCTGTAAAGAAGTATTGAACGACCACATGGCTGTAAAAGGGGAAATGTCAGGGTCGGTCACGTGACTGCATGGCATGCAGGGCGGAAGAAAGAAAGGACATTATATACAAATGACAAGTTTGAGTTTTGCCATTGTTTCCCGAGGAGCCGTACAAATAAAATTCTCGCCTCCTTGGGCCTAGATCGAGGATAGTGAGACGCCTATTATATCAGATGACGATATTTATCGCTCTTGGTTATTGGACCTGGGTGAAAAAGAGATTAGGAATGTGATCATTTATTGAAAAGAAAAAGGTCATCTCTCTCAGCAAGAAAAGAGAGCAGAGCAAGATGTTACTGAAACTCAGATATAATAGCTACTTTTGATAAGGTTAGAGTGAGAACACCGAGGAGGAAAGAGGTGGAGTTTTTGTACTGATAACTAGCAGAGTAAAAAAAATAAGCCAGGTGAGAAATATTTCTCTACCTTTAAACAGACTTGGAAAAAAGACCACCTCTAAGAAGGAAAAAGCACTCCCTTAGAAATTGTGTTTGGTTATATAGAGTATGTTTGGCCAATCTTCTTAAAAACTTTTGTTTCCGTTAAGTAATTTTCTAGAAACAGTTTCAAGAAACAAAAATGTTTGGCCACAAAATTCTAGAAGTGCTTCTAAAAAACGGAAATAGTTTACCTTGTTTTGCCCATTATATTTTATAACTATTTTAAACCATTATCTATATTATTATTTATTATTATAATTATATCATCATCATCTTATTTCCTCAGCCCTTTGATATAATATAGATGGCTCTGATTACGTTAATCAATTTAAGATATAATTTCCCTTTTTTTTCTTTTTAAAATCATGTTCAAATTCTCATCTTTCTCTCTTCTCTAAGAATCCAATCCCACACAGTTCTTGGTTGATAATAGTCTCTTTAATTTTCTTTGTTTCTCTCCATTTTACCATATTTACTGACCACCGTATGGAACACAAGTTTCCAACTAATGGATACCCAAAATTAACCTTCTTCATTATCACGAAGAAGAACTATAGTAGATCCATATTAGATCGACAAAGAGGATAGCTAATTATAGAGCAGTTGGTGCATGGTTGTGGCGGAGCGCGGTCGTAGAGTGATTGGATTCTGATTACTGGGTCGGAGTTTACAAGGAAAAGCAAGAGTTGCCGACGTTGAGGTCCCCAATGAAATTGAGGAGCAAACAAGGTTGGTGGTGTTCAATCTCGGAAGAGATTTGGTGGTGACAATGGAGGGCGTAAGGGGAAAGGTAACAGTACCATGGTTTTAGGTGGGATGTAGGGTCATTTCTAAAACATGAAGGGTATTATGGCACATAGAAAATGATGCATTAAGTTAAATGGCTCCTTGAGAAACAGCTAGAGAAGCTTCAGTTTAGATCTTTTGTTTCTGAGCCCATTAGAAGCTATCTTGGGCTTCTTGAGAATCAGAACTCTTTTTACTTTACCCCCTGTTTGGCCTATTATTTGTTTCTCAAGTGGAGAAGCTGTTCTAGGAGCTTGGCCAAACCTCAGAGTAACCACTTGTCACTTACTCACTTTGGAATTTGGGATATTTGTCTTCTTTTACAGGTCTACTATGTTACAGAATTTTGCATTCCAGGATATATATATACCACAAATTATATAGTGTAATCACTTCAACAACAATGTTATTTGTCATTTTTGTAGGATTAGGTTGTGATCTTAGCTTCTTTTTAGATCCATAAGTCTAGAAGCTTTCCGCGAATTGTCTTTCTCAGATGTAACATTTGATTGATCCTCTGTCTCCCCCCCCCCTTCCCGTAACTGGTGGTCTTGTAGTACCGTAGACTTGTTTGGGATGAGAATAAAAAATAGTTTCGTGTAATGTCAGCAAGATAAATAGCATGTTGAAACGTATCACAATCAGAGAAGGATCTGGTTACTTGGATTTTCTTCCTTGTCTAGAGTGTGTTTTCTACTATTCTAATGGAGTACAAATTTGGTTGCTTGTGTTTTGTGTGAGATCTAATTTTTTTTTTTGTAATATTGTAGCTACCCTTAGGTTAAATATTTTTGACTAATTTGTAGTTAGGTGTAAGATGAGAACAGAGAATTATGGAGCTTTTCTTTTGTATGTTTATTTACAATTACCTTGCTTTTTGATGATGTTTTACTTTGAGTCGTTATTTAGTTTGTTGCATACATGCTGGAAACACGCTGACAAGGGTATATATTTCCTACCCGACACTTCAATTCTCACACAGATACTTCAATTGCTATTGAACCATATATTTGTAGAGGAAAAATTGAAGAAGAAAAGGAACAGGAAGAGAAATAATGTGATATATGCTCAGAAAACGGGTTTCGCATCAATGTTTTAACAAGAACTACCAAGCAAGTCAAAAGGAAATGTTGATTTATGTATTTTTAATGTGAAAAGCACATGTAAGCAGTCTGTTAAAATCAAGAATATGTTAATAAATGTCGTTTCTTGCAACCGTGTCTAATTTTAGGACTTCTCTTGTGTCTGACATATCGAGCTCCAGTGTGTGCCACATACCCCAATCATTTTGGGACTAAGGCTTGGTTGTTGTTGTGTGTACCACATACATATCTCTCATATTTGTGTTTGAATAACTTAGTGTTGAAGGCTCTTTTCTTTGTTCTGTTTTGGGGCTGGGCCATGTGGCATGTTGGCAGTTTTATTGGATAGATAGGAATTCTACGTATCATAGAACCGTTTCAAATTTGTAATAGAGGTAGATGCCCAATCACTATTTATATTGGCTGAAAGCTGCTGAACATAAAACTAAAATTATGTATATAGTAAAAGCTCCACGTTCGCAGACTGTATCAGACCCATAATTCCCACCAGTTTGGGATACAATTATGTTCCATAAGATAGGTTGGTTCTACACTGCTGTAGTTTCTAGATGATGCTAATGAGTCATCTGCTGATTCTATCATGTAGAAGTTTTCTTGGTTGTTTGTCTCCTGCTCAAAACTCTTAAATTCTTCAAATTTATCATTGCACAAAATCTCATCCTGAGTGTAATAATCTTCTGGCTTAGCTATGAGCTTCTCTGGTGAGCTTAAAGAAAAAGATTCTCCGTTACTGCTGCATGTAGCTGGAGCTGAGTCACTTGTGCTGTCTTTAGGTCTTTCTTTTAAACCCCTTAATCGCTGCACCTGCTCAAAAGAGAGATGAAAAACGTGAATACTGGATGTTAGAAACTTAGAACAAGAACCCTTTATCTTTGAAGATTAAGTTCAATTGACTGGTTGACACTATACCTCAATTATCAAGGTCTGATTCTCTTTTTTAAGAACCTCAAACTTAGAGGCAAGACTGTCATAATGAGCTTTCAAGATGCTGTAATCACGCTCTGTCTGTTTTGACTTGCTTCGAGCTCTCCTGTTCTGAAACCATACAGAAACCTGTCGAGGATGAAGTCCGAGCTGGTTAGCAATCCGCTGCTTTGTTTTCGACCCTGGTCTTGATTCTGAATTGAACATCAATTCCAAGGATTTAATTTGCTCGTCACTAAATCTTCTCTTGTTGCAGTTCTTATTTGTTTGCTCCGATGCTACAGGATCAATATCCATACCTGTGGTTCATGTGTGTTTGTGTGTATGTTTTTTCTTTGGCTTTGCAGTTGGCATATAGAATTCTGCTGCTGACAGCAATTTATAGGCTTTTGAGATGGGTGATGCTTTTGGATTAGGAGAGTGTTAGTTCGAGGAAATTTTGGCTCTGATGGATATAGCTGTACTCTTTTACACAAGCAGTAGAGTTTGTGTTTGTGATTGGGTGTGAACCTGTGAAAATAAGGTTTCTCAGTTAAATATATGTATGCCAAATGGATTTCACTAAGATGTTGGGCCCCTGTATTTGATTATGATGTTGGTGCCGTGTCATAGGAGATTCTAGTGGAGTAGGAGAATCTTGTTTGGGACTCCATTAATACACTGTGGCAATCATTTGTGTTGGATAACTCAGAAGTTGGAGAAAACCTTAGCTAAGAGAGTCGATTGTCAATTTTAACACCCCCTATCCTCCTGTTTGTGACGAATGATCCGTGACCATTCACTTCTCGGCCATTTTAGAGATCAAATTATGGAAGGTCCTGTTTGTAACGAATGATCCTTGACCATCCAC

Coding sequence (CDS)

ATGGATTCCGCACAGAACGCGGCAGCAGGAAACAATGGCGTGGTAAATGCACAAGGAAACAATAACAACAGTACCAACAACGAAGGAGCAACCTCGGATGATGCGAAGCAAAACCTAAGTGACGTCACCAACTCCATTGAAAAAACTTTGGGTCTTCTTCATCAGCTTTATCTCACTGTTTCTTCCTTCAATGTTGCCTCCCAGCTTCCTCTCCTTCAACGCATAAATTCTCTGGTGACGGAGCTCGATAATATGATGAAATTGTCTGGAAAGTGCAATATTCAGGTTCCCATGGAGATTCTCAATTTAATTGATGATGGGAAGAATCCAGATGATTTCACCAAGGATGTTCTTAATAGCTGTATTGCTAAAAATCAGATCACCAAAGGCAAAACTGATGCTTTTAAGAGTTTGCGCAAACATATGCTTGAGGAGCTTGATGAAGCTTTTCCCTCTGAAGTGGATGCGTACAGAGATATACGTGCCTCATCTGCCGCTGAGATGAAAAGGTTGGCCCAAGCCCAGAGTGCACTGCCTAATGGAGATGTGAAGGTCAAGGGTGAGCTATAG

Protein sequence

MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPNGDVKVKGEL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26019.1	Spo26019.1	mRNA

Homology

[Close]

BLAST of Spo26019.1 vs. NCBI nr
Match: gi|902228269|gb|KNA21036.1| (hypothetical protein SOVF_046890 [Spinacia oleracea])

HSP 1 Score: 353.6 bits (906), Expect = 2.100e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV 60
           MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV
Sbjct: 1   MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV 60

Query: 61  SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS 120
           SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS
Sbjct: 61  SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS 120

Query: 121 CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN 180
           CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN
Sbjct: 121 CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN 180

Query: 181 GDVKVKGEL 190
           GDVKVKGEL
Sbjct: 181 GDVKVKGEL 189

[Close]

BLAST of Spo26019.1 vs. NCBI nr
Match: gi|731331911|ref|XP_010676908.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 316.2 bits (809), Expect = 3.800e-83
Identity = 169/193 (87.56%), Postives = 182/193 (94.30%), Query Frame = 1


		  
Query: 1   MDSAQNAAA--GNNGVVNAQGNNNN--STNNEGATSDDAKQNLSDVTNSIEKTLGLLHQL 60
           MDSAQN AA  GNNG++NAQGNNNN  S+NN+G  SDDAKQNLSDVTNSI+KTLGLLHQL
Sbjct: 1   MDSAQNTAAVGGNNGIINAQGNNNNNNSSNNDGTISDDAKQNLSDVTNSIDKTLGLLHQL 60

Query: 61  YLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKD 120
           YLTVSSFNVASQLPLLQRINSLV ELDNMMKLS KCNIQ+PME+LNLIDDGKNPD+FTKD
Sbjct: 61  YLTVSSFNVASQLPLLQRINSLVMELDNMMKLSSKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQS 180
           VLNSCIAKNQITKGK DAFKSLRKH+LEEL++AFPSEV+AYRDIRASSAAEMKR+AQAQS
Sbjct: 121 VLNSCIAKNQITKGKADAFKSLRKHLLEELEQAFPSEVEAYRDIRASSAAEMKRMAQAQS 180

Query: 181 ALPNGDVKVKGEL 190
           ALPNGDVKVK EL
Sbjct: 181 ALPNGDVKVKSEL 193

[Close]

BLAST of Spo26019.1 vs. NCBI nr
Match: gi|590675228|ref|XP_007039389.1| (Mediator complex, subunit Med10 isoform 1 [Theobroma cacao])

HSP 1 Score: 262.3 bits (669), Expect = 6.500e-67
Identity = 141/194 (72.68%), Postives = 166/194 (85.57%), Query Frame = 1


		  
Query: 1   MDSAQNAA-----AGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQ 60
           MDS+Q++      +G NG+V++Q N+  +       +DD KQNL+ V NSI+KTLGLLHQ
Sbjct: 1   MDSSQSSTLGTGGSGGNGIVSSQTNDTRTAT----PNDDPKQNLTQVINSIQKTLGLLHQ 60

Query: 61  LYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTK 120
           LYLTVSSFN ASQLPLLQR+NSLV+ELDNM KLS KCNIQVPME+LNLIDDGKNPD+FT+
Sbjct: 61  LYLTVSSFNAASQLPLLQRLNSLVSELDNMAKLSEKCNIQVPMEVLNLIDDGKNPDEFTR 120

Query: 121 DVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQ 180
           DVLNSCIAKNQ+TKGKTDAFKSLRKH+LEEL++ FP EV++YR+IRASSAAE KRLAQ+Q
Sbjct: 121 DVLNSCIAKNQVTKGKTDAFKSLRKHLLEELEQTFPDEVESYREIRASSAAECKRLAQSQ 180

Query: 181 SALPNGDVKVKGEL 190
           S LPNGDVKVK EL
Sbjct: 181 SMLPNGDVKVKTEL 190

[Close]

BLAST of Spo26019.1 vs. NCBI nr
Match: gi|567893466|ref|XP_006439221.1| (hypothetical protein CICLE_v10022441mg [Citrus clementina])

HSP 1 Score: 261.2 bits (666), Expect = 1.400e-66
Identity = 135/182 (74.18%), Postives = 160/182 (87.91%), Query Frame = 1


		  
Query: 8   AAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTVSSFNVAS 67
           A+G NG+V+ Q N+  +       +DD KQNL+ V NS++KTLGLLHQLYLTVSSFN AS
Sbjct: 10  ASGGNGMVSNQANDTTTV-----AADDPKQNLNQVINSVQKTLGLLHQLYLTVSSFNAAS 69

Query: 68  QLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNSCIAKNQI 127
           QLPLLQR+NSLV+ELDNM+KLS KCNIQVPME+LNLIDDGKNPD+FT+DV+NSCIAKNQ+
Sbjct: 70  QLPLLQRLNSLVSELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQV 129

Query: 128 TKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPNGDVKVKG 187
           TKGKTDAFKSLRKH+L+EL++ FP EV+AYR+IRA+SAAE KRLAQ+QS LPNGDVKVK 
Sbjct: 130 TKGKTDAFKSLRKHLLDELEQTFPDEVEAYREIRANSAAEAKRLAQSQSMLPNGDVKVKS 186

Query: 188 EL 190
           EL
Sbjct: 190 EL 186

[Close]

BLAST of Spo26019.1 vs. NCBI nr
Match: gi|297742438|emb|CBI34587.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 260.8 bits (665), Expect = 1.900e-66
Identity = 141/194 (72.68%), Postives = 166/194 (85.57%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGN-----NGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQ 60
           M+S+QNAA+G      NG+   Q N   +    GA S+D KQNL+ V NSI+KTLGLLHQ
Sbjct: 91  MESSQNAASGTGVSGGNGITIPQINAAAAAATAGAGSEDPKQNLNQVINSIQKTLGLLHQ 150

Query: 61  LYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTK 120
           LYLTVSSFNVASQLPLLQR+N+LV+ELDNM KLS KCNIQVPME+LNLID+GKNPD+FT+
Sbjct: 151 LYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKCNIQVPMEVLNLIDEGKNPDEFTR 210

Query: 121 DVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQ 180
           DVLNSCIAKNQITKGKTD+FK LR+H+LEEL++AFP EV++YR+IRA+SAAE KRLAQAQ
Sbjct: 211 DVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPDEVESYREIRAASAAESKRLAQAQ 270

Query: 181 SALPNGDVKVKGEL 190
           S LPNGD+KVK EL
Sbjct: 271 SVLPNGDLKVKTEL 284

[Close]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RND4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046890 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.500e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV 60
           MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV
Sbjct: 1   MDSAQNAAAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTV 60

Query: 61  SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS 120
           SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS
Sbjct: 61  SSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNS 120

Query: 121 CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN 180
           CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN
Sbjct: 121 CIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPN 180

Query: 181 GDVKVKGEL 190
           GDVKVKGEL
Sbjct: 181 GDVKVKGEL 189

[Close]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CK91_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g104020 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.600e-83
Identity = 169/193 (87.56%), Postives = 182/193 (94.30%), Query Frame = 1


		  
Query: 1   MDSAQNAAA--GNNGVVNAQGNNNN--STNNEGATSDDAKQNLSDVTNSIEKTLGLLHQL 60
           MDSAQN AA  GNNG++NAQGNNNN  S+NN+G  SDDAKQNLSDVTNSI+KTLGLLHQL
Sbjct: 1   MDSAQNTAAVGGNNGIINAQGNNNNNNSSNNDGTISDDAKQNLSDVTNSIDKTLGLLHQL 60

Query: 61  YLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKD 120
           YLTVSSFNVASQLPLLQRINSLV ELDNMMKLS KCNIQ+PME+LNLIDDGKNPD+FTKD
Sbjct: 61  YLTVSSFNVASQLPLLQRINSLVMELDNMMKLSSKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQS 180
           VLNSCIAKNQITKGK DAFKSLRKH+LEEL++AFPSEV+AYRDIRASSAAEMKR+AQAQS
Sbjct: 121 VLNSCIAKNQITKGKADAFKSLRKHLLEELEQAFPSEVEAYRDIRASSAAEMKRMAQAQS 180

Query: 181 ALPNGDVKVKGEL 190
           ALPNGDVKVK EL
Sbjct: 181 ALPNGDVKVKSEL 193

[Close]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Match: A0A061G211_THECC (Mediator complex, subunit Med10 isoform 1 OS=Theobroma cacao GN=TCM_015646 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.500e-67
Identity = 141/194 (72.68%), Postives = 166/194 (85.57%), Query Frame = 1


		  
Query: 1   MDSAQNAA-----AGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQ 60
           MDS+Q++      +G NG+V++Q N+  +       +DD KQNL+ V NSI+KTLGLLHQ
Sbjct: 1   MDSSQSSTLGTGGSGGNGIVSSQTNDTRTAT----PNDDPKQNLTQVINSIQKTLGLLHQ 60

Query: 61  LYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTK 120
           LYLTVSSFN ASQLPLLQR+NSLV+ELDNM KLS KCNIQVPME+LNLIDDGKNPD+FT+
Sbjct: 61  LYLTVSSFNAASQLPLLQRLNSLVSELDNMAKLSEKCNIQVPMEVLNLIDDGKNPDEFTR 120

Query: 121 DVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQ 180
           DVLNSCIAKNQ+TKGKTDAFKSLRKH+LEEL++ FP EV++YR+IRASSAAE KRLAQ+Q
Sbjct: 121 DVLNSCIAKNQVTKGKTDAFKSLRKHLLEELEQTFPDEVESYREIRASSAAECKRLAQSQ 180

Query: 181 SALPNGDVKVKGEL 190
           S LPNGDVKVK EL
Sbjct: 181 SMLPNGDVKVKTEL 190

[Close]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Match: V4TRE3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022441mg PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.000e-66
Identity = 135/182 (74.18%), Postives = 160/182 (87.91%), Query Frame = 1


		  
Query: 8   AAGNNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLTVSSFNVAS 67
           A+G NG+V+ Q N+  +       +DD KQNL+ V NS++KTLGLLHQLYLTVSSFN AS
Sbjct: 10  ASGGNGMVSNQANDTTTV-----AADDPKQNLNQVINSVQKTLGLLHQLYLTVSSFNAAS 69

Query: 68  QLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLNSCIAKNQI 127
           QLPLLQR+NSLV+ELDNM+KLS KCNIQVPME+LNLIDDGKNPD+FT+DV+NSCIAKNQ+
Sbjct: 70  QLPLLQRLNSLVSELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQV 129

Query: 128 TKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSALPNGDVKVKG 187
           TKGKTDAFKSLRKH+L+EL++ FP EV+AYR+IRA+SAAE KRLAQ+QS LPNGDVKVK 
Sbjct: 130 TKGKTDAFKSLRKHLLDELEQTFPDEVEAYREIRANSAAEAKRLAQSQSMLPNGDVKVKS 186

Query: 188 EL 190
           EL
Sbjct: 190 EL 186

[Close]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Match: F6HU73_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02580 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.300e-66
Identity = 141/194 (72.68%), Postives = 166/194 (85.57%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGN-----NGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQ 60
           M+S+QNAA+G      NG+   Q N   +    GA S+D KQNL+ V NSI+KTLGLLHQ
Sbjct: 1   MESSQNAASGTGVSGGNGITIPQINAAAAAATAGAGSEDPKQNLNQVINSIQKTLGLLHQ 60

Query: 61  LYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTK 120
           LYLTVSSFNVASQLPLLQR+N+LV+ELDNM KLS KCNIQVPME+LNLID+GKNPD+FT+
Sbjct: 61  LYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKCNIQVPMEVLNLIDEGKNPDEFTR 120

Query: 121 DVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQ 180
           DVLNSCIAKNQITKGKTD+FK LR+H+LEEL++AFP EV++YR+IRA+SAAE KRLAQAQ
Sbjct: 121 DVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPDEVESYREIRAASAAESKRLAQAQ 180

Query: 181 SALPNGDVKVKGEL 190
           S LPNGD+KVK EL
Sbjct: 181 SVLPNGDLKVKTEL 194

[Close]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Match: MD10B_ARATH (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.100e-65
Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 1


		  
Query: 1   MDSAQNAAAG---NNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLY 60
           MD  QN +AG   +NG +  Q N+  ST      +DD+K+NLS V NSIEKTLG+LHQL+
Sbjct: 1   MDPTQNTSAGIGGSNGTIRYQTNDGTSTVT---VADDSKENLSQVINSIEKTLGVLHQLH 60

Query: 61  LTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDV 120
           LTV+SF  ASQL LLQR+NSLV ELDNM KLS KCNIQ+PME+LNLIDDGKNPD+FTKDV
Sbjct: 61  LTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKDV 120

Query: 121 LNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSA 180
           LNSCIA+NQ+TKGKTDAFK LRKH+LEEL++ FP EVD YR+IRASSAA  KRLAQ+QS 
Sbjct: 121 LNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQSV 180

Query: 181 LPNGDVKVKGEL 190
           LPNGD KVK EL
Sbjct: 181 LPNGDAKVKNEL 189

[Close]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Match: MD10A_ARATH (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana GN=MED10A PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.500e-58
Identity = 130/191 (68.06%), Postives = 147/191 (76.96%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGNNGVVNAQGNNNNSTN-NEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLT 60
           MD  QN  AG   +     N +  T  N  AT DD+ + L+ + NS +K L LLHQL LT
Sbjct: 1   MDQTQNTIAGIGEI-----NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLT 60

Query: 61  VSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLN 120
           VSSF  ASQL LLQR+NSLV ELDNM KLS KCNIQVP+E+LNLIDDGKNPD+FTKDVLN
Sbjct: 61  VSSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLN 120

Query: 121 -SCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSAL 180
            +CIAKNQ+TKGK+DAFK LRKH+LEEL++AFP EVD YRDIRAS AAE KRLAQ QS L
Sbjct: 121 KNCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVL 180

Query: 181 PNGDVKVKGEL 190
           PNGD KVK EL
Sbjct: 181 PNGDAKVKSEL 186

[Close]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Match: MED10_AEDAE (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti GN=MED10 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.500e-18
Identity = 45/123 (36.59%), Postives = 77/123 (62.60%), Query Frame = 1


		  
Query: 39  LSDVTNSIEKTLGLLHQLYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPM 98
           L ++ N +E  +  + Q+ + VS F    Q  L Q+I SLVT L  + KL  + ++ VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EILNLIDDGKNPDDFTKDVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYR 158
           E+ + ID G+NP  +TKD ++  + KN+  KGK D+++  + ++++ELDE FP+E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124

Query: 159 DIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Match: MED10_ANOGA (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae GN=MED10 PE=3 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 9.500e-18
Identity = 44/123 (35.77%), Postives = 75/123 (60.98%), Query Frame = 1


		  
Query: 39  LSDVTNSIEKTLGLLHQLYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPM 98
           L ++ N +E  +  + Q+ + VS F    Q  L Q+I SLVT L  + KL  + ++ VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EILNLIDDGKNPDDFTKDVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYR 158
           E+ + ID G+NP  +TKD ++  + KN+  KGK D+++  + ++++EL E FP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124

Query: 159 DIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Match: MED10_MOUSE (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus GN=Med10 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.800e-15
Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 1


		  
Query: 46  IEKTLGLLHQLYLTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCN-IQVPMEILNLI 105
           +EK +  + QL + VS F  +SQ  L Q++N +VT L ++ K   + + I VP+E+   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDDFTKDVLNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIR 162
           D G+NP  +TK+ L   +AKN+  KGK D  K  +  +++EL + FP ++  YR IR
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of Spo26019.1 vs. TAIR (Arabidopsis)
Match: AT1G26665.2 (Mediator complex, subunit Med10)

HSP 1 Score: 248.4 bits (633), Expect = 3.400e-66
Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 1


		  
Query: 1   MDSAQNAAAG---NNGVVNAQGNNNNSTNNEGATSDDAKQNLSDVTNSIEKTLGLLHQLY 60
           MD  QN +AG   +NG +  Q N+  ST      +DD+K+NLS V NSIEKTLG+LHQL+
Sbjct: 1   MDPTQNTSAGIGGSNGTIRYQTNDGTSTVT---VADDSKENLSQVINSIEKTLGVLHQLH 60

Query: 61  LTVSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDV 120
           LTV+SF  ASQL LLQR+NSLV ELDNM KLS KCNIQ+PME+LNLIDDGKNPD+FTKDV
Sbjct: 61  LTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKDV 120

Query: 121 LNSCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSA 180
           LNSCIA+NQ+TKGKTDAFK LRKH+LEEL++ FP EVD YR+IRASSAA  KRLAQ+QS 
Sbjct: 121 LNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQSV 180

Query: 181 LPNGDVKVKGEL 190
           LPNGD KVK EL
Sbjct: 181 LPNGDAKVKNEL 189

[Close]

BLAST of Spo26019.1 vs. TAIR (Arabidopsis)
Match: AT5G41910.1 (Mediator complex, subunit Med10)

HSP 1 Score: 225.3 bits (573), Expect = 3.100e-59
Identity = 130/191 (68.06%), Postives = 147/191 (76.96%), Query Frame = 1


		  
Query: 1   MDSAQNAAAGNNGVVNAQGNNNNSTN-NEGATSDDAKQNLSDVTNSIEKTLGLLHQLYLT 60
           MD  QN  AG   +     N +  T  N  AT DD+ + L+ + NS +K L LLHQL LT
Sbjct: 1   MDQTQNTIAGIGEI-----NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLT 60

Query: 61  VSSFNVASQLPLLQRINSLVTELDNMMKLSGKCNIQVPMEILNLIDDGKNPDDFTKDVLN 120
           VSSF  ASQL LLQR+NSLV ELDNM KLS KCNIQVP+E+LNLIDDGKNPD+FTKDVLN
Sbjct: 61  VSSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLN 120

Query: 121 -SCIAKNQITKGKTDAFKSLRKHMLEELDEAFPSEVDAYRDIRASSAAEMKRLAQAQSAL 180
            +CIAKNQ+TKGK+DAFK LRKH+LEEL++AFP EVD YRDIRAS AAE KRLAQ QS L
Sbjct: 121 KNCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVL 180

Query: 181 PNGDVKVKGEL 190
           PNGD KVK EL
Sbjct: 181 PNGDAKVKSEL 186

The following BLAST results are available for this feature:

BLAST of Spo26019.1 vs. NCBI nr
BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
BLAST of Spo26019.1 vs. TAIR (Arabidopsis)

BLAST of Spo26019.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228269\|gb\|KNA21036.1\|	2.1e-94	100.	hypothetical protein SOVF_0468...	[more]
gi\|731331911\|ref\|XP_010676908.1\|	3.8e-83	87.5	PREDICTED: mediator of RNA pol...	[more]
gi\|590675228\|ref\|XP_007039389.1\|	6.5e-67	72.6	Mediator complex, subunit Med1...	[more]
gi\|567893466\|ref\|XP_006439221.1\|	1.4e-66	74.1	hypothetical protein CICLE_v10...	[more]
gi\|297742438\|emb\|CBI34587.3\|	1.9e-66	72.6	unnamed protein product [Vitis...	[more]

BLAST of Spo26019.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RND4_SPIOL	1.5e-94	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CK91_BETVU	2.6e-83	87.5	Uncharacterized protein OS=Bet...	[more]
A0A061G211_THECC	4.5e-67	72.6	Mediator complex, subunit Med1...	[more]
V4TRE3_9ROSI	1.0e-66	74.1	Uncharacterized protein OS=Cit...	[more]
F6HU73_VITVI	1.3e-66	72.6	Putative uncharacterized prote...	[more]

BLAST of Spo26019.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
MD10B_ARATH	6.1e-65	70.8	Mediator of RNA polymerase II ...	[more]
MD10A_ARATH	5.5e-58	68.0	Mediator of RNA polymerase II ...	[more]
MED10_AEDAE	1.5e-18	36.5	Mediator of RNA polymerase II ...	[more]
MED10_ANOGA	9.5e-18	35.7	Mediator of RNA polymerase II ...	[more]
MED10_MOUSE	5.8e-15	37.6	Mediator of RNA polymerase II ...	[more]

BLAST of Spo26019.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G26665.2	3.4e-66	70.8	Mediator complex, subunit Med1...	[more]
AT5G41910.1	3.1e-59	68.0	Mediator complex, subunit Med1...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 44..158 score: 1.2
None	No IPR available	PANTHER	PTHR13345	NUT2 AND UXT	coord: 32..189 score: 6.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008152	metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0046862	chromoplast membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0009916	alternative oxidase activity
molecular_function	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016881	acid-amino acid ligase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0046872	metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19938	0.70	Barchart \| Table
Spo14537	0.68	Barchart \| Table
Spo09659	0.67	Barchart \| Table
Spo19018	0.67	Barchart \| Table
Spo20695	0.66	Barchart \| Table
Spo13614	0.66	Barchart \| Table
Spo24133	0.65	Barchart \| Table
Spo02932	0.65	Barchart \| Table