Spo26126 (gene)

Overview
NameSpo26126
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2 (1.97.1.12) (PSI-B) (PsaB)
LocationSpoScf_16137 : 72 .. 440 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCTCACTTTGGGCAATTTGCAATCATTTTTCTGTGGACTTCCGGAAATCTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGGTACAGGACCCTTTACACGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCTGCTGTAGAAGCTTTTACTCGGGGAGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGG

mRNA sequence

ATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCTCACTTTGGGCAATTTGCAATCATTTTTCTGTGGACTTCCGGAAATCTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGGTACAGGACCCTTTACACGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCTGCTGTAGAAGCTTTTACTCGGGGAGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGG

Coding sequence (CDS)

ATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCTCACTTTGGGCAATTTGCAATCATTTTTCTGTGGACTTCCGGAAATCTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGGTACAGGACCCTTTACACGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCTGCTGTAGAAGCTTTTACTCGGGGAGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGG

Protein sequence

MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLWTSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26126.1Spo26126.1mRNA


Homology
[Close]
BLAST of Spo26126.1 vs. NCBI nr
Match: gi|1002165408|ref|YP_009235539.1| (PsaB (chloroplast) [Cynanchum wilfordii])

HSP 1 Score: 268.9 bits (686), Expect = 4.500e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. NCBI nr
Match: gi|657302859|ref|YP_009041086.1| (photosystem I P700 chlorophyll a apoprotein A2 [Rhazya stricta])

HSP 1 Score: 268.9 bits (686), Expect = 4.500e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. NCBI nr
Match: gi|404474524|ref|YP_006666029.1| (photosystem I P700 apoprotein A2 (chloroplast) [Capsicum annuum])

HSP 1 Score: 268.9 bits (686), Expect = 4.500e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. NCBI nr
Match: gi|229577753|ref|YP_002836089.1| (photosystem I P700 apoprotein A2 [Megaleranthis saniculifolia])

HSP 1 Score: 268.9 bits (686), Expect = 4.500e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. NCBI nr
Match: gi|671743318|ref|YP_009050848.1| (photosystem I P700 apoprotein A2 (chloroplast) [Camellia pubicosta])

HSP 1 Score: 268.9 bits (686), Expect = 4.500e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Match: A0A0S1EH81_9LAMI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Plantago media GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.100e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Match: A0A0U2EU00_9APIA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Fatsia japonica GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.100e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Match: D3WD75_9MAGN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Berberidopsis corallina GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.100e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Match: A0A076FJ31_9DIPS (Photosystem I P700 apoprotein A2 (Fragment) OS=Viburnum lutescens GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.100e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Match: A0A076FHH4_9DIPS (Photosystem I P700 apoprotein A2 (Fragment) OS=Viburnum clemensae GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.100e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Match: PSAB_ILLOL (Photosystem I P700 chlorophyll a apoprotein A2 OS=Illicium oligandrum GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-71
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Match: PSAB_LIRTU (Photosystem I P700 chlorophyll a apoprotein A2 OS=Liriodendron tulipifera GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-71
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Match: PSAB_CALFG (Photosystem I P700 chlorophyll a apoprotein A2 OS=Calycanthus floridus var. glaucus GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-71
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Match: PSAB_BUXMI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Buxus microphylla GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-71
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Match: PSAB_SOLBU (Photosystem I P700 chlorophyll a apoprotein A2 OS=Solanum bulbocastanum GN=psaB PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-71
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. TAIR (Arabidopsis)
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 267.7 bits (683), Expect = 3.500e-72
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1 

		  

Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQ AIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFE+WVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQW 124
           YQW
Sbjct: 121 YQW 123
[Close]
BLAST of Spo26126.1 vs. TAIR (Arabidopsis)
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 90.9 bits (224), Expect = 5.900e-19
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1 

		  

Query: 8   FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQFAIIFLWTSGNLF 67
           FS+ +A+ P TT  IW   A AHDF+SH    EE + + +F++HFGQ +IIFLW SG  F
Sbjct: 32  FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 91

Query: 68  HVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALG 112
           H A   N+E+W+ DP H+ P A  +W P  GQ  +     GG  G
Sbjct: 92  HGARFSNYEAWLSDPTHIGPSAQVVW-PIVGQEILNGDVGGGFRG 134
The following BLAST results are available for this feature:
BLAST of Spo26126.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|1002165408|ref|YP_009235539.1|4.5e-6999.1PsaB (chloroplast) [Cynanchum ... [more]
gi|657302859|ref|YP_009041086.1|4.5e-6999.1photosystem I P700 chlorophyll... [more]
gi|404474524|ref|YP_006666029.1|4.5e-6999.1photosystem I P700 apoprotein ... [more]
gi|229577753|ref|YP_002836089.1|4.5e-6999.1photosystem I P700 apoprotein ... [more]
gi|671743318|ref|YP_009050848.1|4.5e-6999.1photosystem I P700 apoprotein ... [more]
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BLAST of Spo26126.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0S1EH81_9LAMI3.1e-6999.1Photosystem I P700 chlorophyll... [more]
A0A0U2EU00_9APIA3.1e-6999.1Photosystem I P700 chlorophyll... [more]
D3WD75_9MAGN3.1e-6999.1Photosystem I P700 chlorophyll... [more]
A0A076FJ31_9DIPS3.1e-6999.1Photosystem I P700 apoprotein ... [more]
A0A076FHH4_9DIPS3.1e-6999.1Photosystem I P700 apoprotein ... [more]
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BLAST of Spo26126.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSAB_ILLOL2.8e-7199.1Photosystem I P700 chlorophyll... [more]
PSAB_LIRTU2.8e-7199.1Photosystem I P700 chlorophyll... [more]
PSAB_CALFG2.8e-7199.1Photosystem I P700 chlorophyll... [more]
PSAB_BUXMI2.8e-7199.1Photosystem I P700 chlorophyll... [more]
PSAB_SOLBU2.8e-7199.1Photosystem I P700 chlorophyll... [more]
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BLAST of Spo26126.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00340.13.5e-7298.3Photosystem I, PsaA/PsaB prote... [more]
ATCG00350.15.9e-1944.7Photosystem I, PsaA/PsaB prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBGENE3D1.20.1130.10coord: 4..123
score: 1.6
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 8..123
score: 5.4
IPR001280Photosystem I PsaA/PsaBunknownSSF81558Photosystem I subunits PsaA/PsaBcoord: 4..123
score: 5.36
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 3..123
score: 2.7
NoneNo IPR availablePANTHERPTHR30128:SF4PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2coord: 3..123
score: 2.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009987 cellular process
biological_process GO:0006812 cation transport
biological_process GO:0015917 aminophospholipid transport
biological_process GO:0009635 response to herbicide
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0043412 macromolecule modification
biological_process GO:0065007 biological regulation
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0015979 photosynthesis
biological_process GO:0009409 response to cold
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0045332 phospholipid translocation
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0070143 mitochondrial alanyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0007129 synapsis
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0016572 histone phosphorylation
biological_process GO:0006814 sodium ion transport
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0009630 gravitropism
biological_process GO:0006342 chromatin silencing
biological_process GO:0009920 cell plate formation involved in plant-type cell wall biogenesis
biological_process GO:0015074 DNA integration
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0034968 histone lysine methylation
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006554 lysine catabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0009769 photosynthesis, light harvesting in photosystem II
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009853 photorespiration
cellular_component GO:0009523 photosystem II
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031361 integral component of thylakoid membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0044425 membrane part
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005840 ribosome
cellular_component GO:0009522 photosystem I
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005739 mitochondrion
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005819 spindle
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009524 phragmoplast
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0009574 preprophase band
cellular_component GO:0030981 cortical microtubule cytoskeleton
cellular_component GO:0005874 microtubule
cellular_component GO:0031966 mitochondrial membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0004813 alanine-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0008777 acetylornithine deacetylase activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity
molecular_function GO:0005488 binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0018024 histone-lysine N-methyltransferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0032549 ribonucleoside binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0005524 ATP binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0010242 oxygen evolving activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity
molecular_function GO:0004012 phospholipid-translocating ATPase activity
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0020037 heme binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0000049 tRNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo042770.90Barchart | Table
Spo062010.90Barchart | Table
Spo247070.90Barchart | Table
Spo028510.89Barchart | Table
Spo255550.88Barchart | Table
Spo247170.87Barchart | Table
Spo106270.87Barchart | Table
Spo255380.86Barchart | Table
Spo058750.85Barchart | Table
Spo224450.84Barchart | Table
Spo170100.83Barchart | Table
Spo084400.82Barchart | Table
Spo261270.81Barchart | Table
Spo161960.81Barchart | Table
Spo062000.80Barchart | Table
Spo247080.80Barchart | Table
Spo180440.79Barchart | Table
Spo017480.79Barchart | Table
Spo250040.79Barchart | Table
Spo225720.78Barchart | Table
Spo042780.77Barchart | Table
Spo094130.77Barchart | Table
Spo195600.76Barchart | Table
Spo255370.76Barchart | Table
Spo247180.76Barchart | Table
Spo247190.75Barchart | Table
Spo164840.75Barchart | Table
Spo054120.75Barchart | Table
Spo214390.74Barchart | Table
Spo119040.74Barchart | Table
Spo148160.74Barchart | Table
Spo211710.73Barchart | Table
Spo164850.73Barchart | Table
Spo179230.73Barchart | Table
Spo006260.71Barchart | Table
Spo040840.71Barchart | Table
Spo164900.71Barchart | Table
Spo176180.71Barchart | Table
Spo219460.70Barchart | Table
Spo139570.70Barchart | Table
Spo168950.69Barchart | Table
Spo024850.69Barchart | Table
Spo257070.68Barchart | Table
Spo163840.68Barchart | Table
Spo242020.68Barchart | Table
Spo159380.68Barchart | Table
Spo190780.67Barchart | Table
Spo195610.67Barchart | Table
Spo109470.67Barchart | Table
Spo085240.67Barchart | Table
Spo199750.66Barchart | Table
Spo225730.66Barchart | Table
Spo105500.66Barchart | Table
Spo181790.66Barchart | Table
Spo073550.66Barchart | Table
Spo063830.66Barchart | Table
Spo047030.66Barchart | Table
Spo130530.65Barchart | Table
Spo024980.65Barchart | Table
Spo126600.65Barchart | Table