Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTACTCTCATATATTTTGCCGGCTTTTTCAAACGAGAAAAAATGCAATAGAGCTTCCCTAACAAAAATAAAAATCTTGCATTATCAATCCCCAATTTCCGATTCACAATCCCTTAAACCCTAATCAGTAAAACCCACAACTACAGTCTACAGCACCCGAGAGAAAGAGAAAAGAAACAACAATGGCGTGGCGAACTGGATCATTCTCAAGGTCTTTCCTCAACGCTACCAGATCTCCTTCCATCCGACGTTCCACCACCTTCCGCCGCCCTACTTCACCGCTCCTCCCTAATTCCGTCCGAAATTCTCGCCGCCTTTCTTTCACGAACCCTAGGTAACATCCACATTTCTCAAATTTTCAGTTCAGTTATTTCCCCCCAAATTCTTCGTTTCCATTTATGCAAATGTGAATGCTACATTTTGTCAGGAGCTTTGACGTATTGGGGTGCGCTCAATCGCTGATGCCGATGCATAACGTGGTGGCCGACGCTCGATTGACATCGCACATTGCTGTCGACGCCAGGGCTTGTTGCGAGCTGTCTCAGGGTACCTTCTGCCGCACTTGTCAAGATCGCTAATTTCATCTCCCTCTTTTTATCTCTCTTCCTTCCTCACTTCGTGAGTCTCATTGTTTTGTTGTGGCATTGTATATTATGCAATTATATTTGATTTCCCATCTAATTAATTTCAACTACTATTATGGTATTGATAATGGTTGATTTGCTTAACTGTTGTGTGTTTGGTAGTAATTAGACATTTGTTTTTCGTTAGAGACTAGCAAGACAGTGGCTGAAATTGAAGTTTCATTATTTTTGAAATACAGGGGTGTTAAGACTAATTGTTGATGCTAGAAGTTCTTCTGAACTTGAATTTGATGATCAGATTTGTAGATTCGGACATTATATACTACTTGAGGGTTAGGATTTAGATTACCAAGAATTTAACATGTTTCTCTGCGCCTTGAACTTTAAGATCTTCACTGCTTGAAGGGAGACATTTTCTGACCATAGGCTTTTCTGACCATAGGCTTTTCTGACCATAGGGAAATAGTTAGGAAAACTCGCATCCTAATTGATAAAAAAGTGAGGCCCTCTATGACGCAGTCACGCAGAGGGTTTTGGCTGCGCGAGGTGAAGGCAACACATGTGCATCACTTGTACAGGTGCACTTTTTTAGCAGAAGAAATACATGTATATTAATAGGAAGAGATAGAGAGAGCAATCAAACAAAAACATAGAACAATGGTGAATGAGGTTTAATGTGTGGGCTTCACATGCTCCTCATTGGCACCTAAGGCAAGACAAGGGGCTTCCGCTTTAGCCTTGACGGCATCATTTTCCTCGTCACACCCTTGTTTTTTAAGCCAAAAACACATAATTTGGTTTGTCAGAACTAATATGGATTCCAATGACAATGACTATATGTCTTCATATATTTGGTTCTCTCCATTTTTTCTGTCTCTCTCTCCTTTTATCCCTTCTGTTGATGGATATACGAATTTGTACATATAGAAACCTAGGAATTTTAAAATTATCTTTTAACTAATTAGGGTACAGCTATGTATTATGAGTGTTACTCTTATAATAGTATTTATGCAAAATCGTTGATCTGATTTCAATGAACATAATATTTTGGAAGAGAGAGATAGTTGGACAGAATTCTCATACCTTCATCCCCACGAACTTATTCTAAAATATAAAGGTCCATTATTAAACTCTATGTGTGTCTACACGCACATGACTGTTCTCATATTGGAGAAGCAGTGAAAAAGTAACCACATTATGAGTTTTCGTGGTTATTCATCACATTGCCAATTAGTTTTTTTTGGATAGAACTTTCGTTAGACTTGGTTTTGGTTTTCTATGTCATGAGAAATTCAGGCCCATTTGCATGTTGAGTTGATTAATGTTGTGAGCTTTTTAATTATAAAACTGGATAATTATCTTGATAAACATAGCTTATTCTAGTTCTAGTTGAGTTAAAAACTACATTAATGTCGTGAGCTTTTTCTAACATGTAGAACTAGTGTTTTTAAAGACAATTTAAGCCTTCGATAGTGGAAGGTGATGATAAAGAAAAACGGTTAGCGATCAGGAGTTGATCTGTATTGCTGATATCTTGATAAACATAGCTTATTTTCAGAAATCTAGTTCATGCGTCTCTTTTGAACTTCTTCTTTCTTCCACACAACTCATCACCAACTCAGGAAACACCTCTTTTTTTTTTTGACAATGGTGAACCCTAAAAATATTACCAGTTTTCTTCTCTTGCTCTCCAATTAAATGTTGTCTAGAAAAGAACTAGGCTAATGGGTGCTTCCATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNGTGTAATAACCTATGTCACTCAGAGACTTCATTTCACATCCAGTATCCGTGTCAGATTACACTCTGGCATGAATATGAACATTGAACACTATGAAACTTCATTTGGGCCAAAATCATGATAGATTTTTCACAAAACAGTTACGTCGGATACTTCAGACATGTTAACATATGTAGCAACCTTTGATGGTTATTTCCTTGTACATAGAAGCTTAAGAATTGTAACTATTGTTGTTTTTGCTAGATTTTTTTTTTATTAATTAGATAAGAAACACTACTATAAACACCCTCGATTATATTGGTAAACATTGAAGGACACACTACTGGTTGTAATTGTAATTAGTAAGCAACAAGGAACTAGAGAATCGCAATTTAGCATCATGGTTTGGAAGTCTGAAAAGAAACCTTTATTGATTTCCTTTTCGATTTAAGGACAAAGATGTTGAGTTGGCACAATGAGTAGGAGCCGTATTCCTTATGACTACGCTTAACCACACTGAATGATAGTGAAGAGCAGGATATGTTATATATGGGTTGGCTGCCTATCAAGCTTACTTGTCCATCTGGCTCCAAACTTTTTTGATCACTTGTGATTTCAAATTGTTGTTTGTCATGGTATTAGTTGAGCATGGATATAAAATTAGTAAATTACGGTTCCAGTGTTTTCTCTAGGATATTCCTTCCTTTCAAGTTATTTCTCAGGACTCGCAAAAATGTTAAATCATTAAAATACCATGCACTATTACATGGTTGCATCATGAGTTTGAAAATAGTCACTTAGTTTAGACGAAAATTGATGACCATCCTGAGCTTTACTTCCTTCAAATGTGATATCACATTACTTTTAGGGCTTTGGAGTTGAGAAGATTATCTTGATTTTGAGTTCTGCTTACATTTTAGACGTATAAATGATGCCTTGCAACAACTTGATTCATGGTGTTCGCGTCAGCATGACACTTTTACTTCACTGTTAATTTATTTTCTTATATGTTTTAGGTACTTAAATTGCCTGAGTTGGTAAAGGAAAAAAAAGGAATTCTCTCAAGTTGATGGTGATATTGTTGCATGGAGCACTCTGATGTAGGCAGCAGGAGTCTTCAGAAGTAGGTGTTGTCTACACTTTCCTTATGTTCTGTTGGAAAGTTTACTCTAAATAACCTGATCAAGATCAAATTAAAATTTCCTTGGAAACGCGTGCAGATAATCTTTTTGTCAATACTTTGTGTAGGTGACATTTTCTCTGTTGATTTCATTTAAGAAATTAATGGTACCCAATTTGGTATGTCTTCTGTTGTGCTTGCTGCTGCTTGCATGTTTTTATTTTTATTTTTTTTATTTTTATGAGTTGTGTATTTCTTTCTCTATTTGCAGTGAATCAAATCTTTCTCCCTCCCTTCCCTTCCCTTCCCTTCCCTTCCTATGTCTGGGCAACATCTAGTTGAAAATGGCATACCTGTTGGACGGAGATTGTTTATCACTCCATTACGTTGATGAATGGTTCTTCAAATAGTACTCCTTCCATTCCTAAATAAGTGTCCTATTTGGAAGAATGCGCGGGGATTAAGAAAAATGAGAAGTGTGTAAGAAAACAATGATTGAGAGTATTTTTTTTAGGAAAGGATAAAGTAGATAATTGTTTACTGATAAAGTACAAATAAAAGTGGATGTGGGGATAAAGAAGTGTAGAATGTGTAAGAAAAAACAATCATGATTTATAGAAAAGTGGGAGAAGTGTATGTCCAAAATTGAAAAGCGGACACTTATTAGGGAACGCTATAAATAGAAATAGGACACTTATTTAGGAACAGGGGGAGTATCAAACTAGGGATTACTAGACGAACTTTGAGATGCTGCTGTGAGTTATGGTCTTTAACTTGTTGAGCTATGCATAGGATCTTTTTTGAAAGGAAGGGTGTTAACAGGTGATAGGATAGAGACTCCGGGTGCTGGAATCTGGCCGCATAAGATTCCATTTTAATCAACATGATATCATCATGTTCTGTCTCCCGTTGTTATTACCAAATTGTCAAATGAACTACTTGTATGATTTTATAGTGAGTAGACCAACCACAGTGCAGAGCATGGAGCCTCGCCTATTGGTCCTATGGGTGGATACAGACTCAGAGTCACTTACCTGGTTAATTAGGGAAGAGGTCAGATAACTCGTTTTTTTCTCTTTCTTTTTGGGCAAGTGAGTGAAGACATCACATTATGACAAAAACCATACTTACCTCGGGGAATTGTAAATGTGATGTGCCTTTCTAAACTCCACTAGCAACCATCTGTTTATTTGCAAGATCATGATTAGAAGGGTCTTTATGAACACTCTGTAGTATTTTATTCATTAGCTGCCCTGGTTAATTTTGTGGTGGAAGTTAGGCTTGGGTTGAGGTGGGGAAAATAGAGGAGGAGTGAATATACTTCATAGTATTTACCTTTGTACATTTATTAATGAATTGCATTCATTAAACGAAAATGTAAAATGTAGCTTAAATGATTATGGATGAATCAGAAATTTTATATTGAAATACTTAACTAAACAATCAGTACACTAACATTTATTTTAATGAAAACATGTAATAAGTCTGTGTACATTGAGTCACTTGTTCACAATCCACACCCCTTAAGGCTTTGTTGGCAAAACCTTTTTGTAAATTTACCCTAAATAAATAAATGCTAAATGTAAAAGGCAGAGCTGCAAGATAGTATACAGAGTTGCAGAAGATTGGTTAGCAGTGCACAGATAGTTTGTGGCTGTGGTTTAAAGGATCTTATTTAGAGATGTTAGAATGAACTTGAGAAATGACCAGGATCTTAGATCACAAAGGTTCCTATTTAATTTCTGCCTTGAAAAGAGCCGAGTCGGTCGATCAGGCTCCATATTTAAGTGTGGGGTGGTCCAAACTATTGTACTTCAATTTGCCCTTATTCTTCTTATCAGGCTTACTGAAAAGTATGGGCTAGAAGCAGAAAGTTGCTTTAGCAACTTTGGAACACATCAATCTTGATCAAATGTTGTTACTTTAAAATAAAATAAAATAGAAAAGGGTAAGAAAAGCAGTACAGATTACTTGAACAATTTCCTACCATCCTCCAATCACTAAAGAATCTTGTTCTTGAATTATTATAGTCCTACTTGATTTGGGAAATAAAGAGAGATGATTGAACCAAAACCCTGACAGAAACCCTGCTGCACTGAAAGATGAGATAAGATATTTGGTTATGTGTTAATAATAATTCATGTGTATCTTAATAGAGAAGCATCCTTTTCCACTTGGATGATTAA ATTTACTCTCATATATTTTGCCGGCTTTTTCAAACGAGAAAAAATGCAATAGAGCTTCCCTAACAAAAATAAAAATCTTGCATTATCAATCCCCAATTTCCGATTCACAATCCCTTAAACCCTAATCAGTAAAACCCACAACTACAGTCTACAGCACCCGAGAGAAAGAGAAAAGAAACAACAATGGCGTGGCGAACTGGATCATTCTCAAGGTCTTTCCTCAACGCTACCAGATCTCCTTCCATCCGACGTTCCACCACCTTCCGCCGCCCTACTTCACCGCTCCTCCCTAATTCCGTCCGAAATTCTCGCCGCCTTTCTTTCACGAACCCTAGGAGCTTTGACGTATTGGGGTGCGCTCAATCGCTGATGCCGATGCATAACGTGGTGGCCGACGCTCGATTGACATCGCACATTGCTGTCGACGCCAGGGCTTGTTGCGAGCTGTCTCAGGGGGTGTTAAGACTAATTGTTGATGCTAGAAGTTCTTCTGAACTTGAATTTGATGATCAGATTTGTAGATTCGGACATTATATACTACTTGAGGGGTACAGCTATGTACTTAAATTGCCTGAGTTGACCAACCACAGTGCAGAGCATGGAGCCTCGCCTATTGGTCCTATGGGTGGATACAGACTCAGAGTCACTTACCTGAGAAGCATCCTTTTCCACTTGGATGATTAA ATGGCGTGGCGAACTGGATCATTCTCAAGGTCTTTCCTCAACGCTACCAGATCTCCTTCCATCCGACGTTCCACCACCTTCCGCCGCCCTACTTCACCGCTCCTCCCTAATTCCGTCCGAAATTCTCGCCGCCTTTCTTTCACGAACCCTAGGAGCTTTGACGTATTGGGGTGCGCTCAATCGCTGATGCCGATGCATAACGTGGTGGCCGACGCTCGATTGACATCGCACATTGCTGTCGACGCCAGGGCTTGTTGCGAGCTGTCTCAGGGGGTGTTAAGACTAATTGTTGATGCTAGAAGTTCTTCTGAACTTGAATTTGATGATCAGATTTGTAGATTCGGACATTATATACTACTTGAGGGGTACAGCTATGTACTTAAATTGCCTGAGTTGACCAACCACAGTGCAGAGCATGGAGCCTCGCCTATTGGTCCTATGGGTGGATACAGACTCAGAGTCACTTACCTGAGAAGCATCCTTTTCCACTTGGATGATTAA MAWRTGSFSRSFLNATRSPSIRRSTTFRRPTSPLLPNSVRNSRRLSFTNPRSFDVLGCAQSLMPMHNVVADARLTSHIAVDARACCELSQGVLRLIVDARSSSELEFDDQICRFGHYILLEGYSYVLKLPELTNHSAEHGASPIGPMGGYRLRVTYLRSILFHLDD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26185.1 vs. NCBI nr
Match: gi|902157100|gb|KNA06092.1| (hypothetical protein SOVF_184310 isoform A [Spinacia oleracea]) HSP 1 Score: 181.4 bits (459), Expect = 1.300e-42 Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 1
BLAST of Spo26185.1 vs. NCBI nr
Match: gi|902157101|gb|KNA06093.1| (hypothetical protein SOVF_184310 isoform B [Spinacia oleracea]) HSP 1 Score: 181.0 bits (458), Expect = 1.700e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo26185.1 vs. NCBI nr
Match: gi|731337010|ref|XP_010679562.1| (PREDICTED: uncharacterized protein LOC104894897 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 152.5 bits (384), Expect = 6.400e-34 Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 1
BLAST of Spo26185.1 vs. NCBI nr
Match: gi|902220737|gb|KNA18688.1| (hypothetical protein SOVF_068440 [Spinacia oleracea]) HSP 1 Score: 123.2 bits (308), Expect = 4.100e-25 Identity = 70/95 (73.68%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of Spo26185.1 vs. NCBI nr
Match: gi|719970452|ref|XP_010271403.1| (PREDICTED: uncharacterized protein LOC104607453 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 106.7 bits (265), Expect = 4.000e-20 Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFQ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184310 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 8.900e-43 Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 1
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHC5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184310 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.200e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C855_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127570 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.400e-34 Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 1
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGR8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_068440 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.900e-25 Identity = 70/95 (73.68%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Match: A0A151SC95_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025737 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.200e-17 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 1
BLAST of Spo26185.1 vs. TAIR (Arabidopsis)
Match: AT4G34265.1 (unknown protein) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-14 Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 1
BLAST of Spo26185.1 vs. TAIR (Arabidopsis)
Match: AT2G15000.4 (unknown protein) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-14 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 1
BLAST of Spo26185.1 vs. TAIR (Arabidopsis)
Match: AT4G17310.1 (unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 6.000e-6 Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26185.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26185.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26185.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo26185.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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