Spo26205 (gene) | SpinachBase

Overview


Name	Spo26205
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	CDO504
Location	SpoScf_01890 : 76048 .. 81759 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTGTTGAGCAAAAAGCTGAAAATAAAAACGCAAATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGTAATTTCTCCCCTCCTCCCTTTCTCCATGACTCTATTCTGTAGTTTTGTTAAGCAACATCACTGATCACTGCATCACTGACAAAATCCAATTGCTGTTAAAATTTAGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTCAATTTCTACCTTATTTCTCCGCTTCTAAAATTCCCCATCTCACAGTTTATAGCATTCTTTCTGAAATTTGGGAAAATTTTGATAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTGTATGTGTATTTTTCTTGTACAATTCAATCAATTTCTGTTTCTTGTTTGTTCAATTCAATTTTGTTCTAAATTTCCCCATTTTTTGGGGTTTGTTGTTGATTTCAGTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTAAGTTTTTTGCCTCTTCAACTTCAATGTGTAATTATTTTTGTTGGTGAAGTTCATTACTTTATGTTTCCTAAGTGAATTGGGTATTGGATTATTGTGTTATTGTGGATGTGCAACTGATGAATATTGGTCGTTTGAGAAAATGCAACTGAGATGATGATAGTGGTTTATCTAGTTCATTATGTAAATGTAATCAGCTGTAATCATTCAACATGTACATGTATCCAAGCTGGATCAGACTGCCATTTTCAGAAAAAATTAATTGTTTTGGCCTTAGCTGAAGTGTTTTAGTGTCTATGTCCAAGTCTGAGTACCAGGTTGTCGATACAAGTGTGTAAGGTGAAAATGAAGAGCCTATGTAACATAGCTAGCACCTTTCTATTTAATAAGGAAACTTGAGTGAAAATGAGGAAGATAGTCTCCATTGTGCTAGAGGATTCATATTGGAATGTGGATCATATTGCTTCATCACTTGTTAGTCTTTTATTGTGATTTACGAGTTGCTCGAGTAAGTGTTTAGGAAATTGGCTGCTTGGACTTTAGTAAAAATTGACTGGAGATTTGTGTCTAGTTTCTTGAGATAAAATTATTACAAGTGATGGTTTTGAAAGTGACAATTGTGCTTCCTCACTTTAGATTTTCATTTTAGGTGGTGGACTTTGTTGTTTGTATTACCTTTGAACGAGGATCATGGTGTTGTTCCCAAACATTTATTTTTTACACTTTAGGCCTTTTAATGTCTATTGGGTCAAAATTAATGTTCCACACACCCTCTTTATTCTCATATGCACACGTCCAAATCTTTATGTTACCATTTACAATAATTTGAGTGTTGTATTGGTTTCACGACATCGCATGCTGATACATGAATATTGTGTCTAACACGAGTTTTGTGCTCATAGACTGTGCAATGTATTTGTATAAATAGCAGGTCGCGATGTCATGTTATTTACTGTTAATATTACCTCAACGCTTATGACAGGCATCTGATAAGAAATAAGAACAGGTTTTGGGATAGAAGTTAAGATGTAAATAAACTTAACAGATGAAGTGGAGTGACAACTTCTGTTTGACCTTCCATTGGAATGCGATATTTTTCTTTTGTTTGGATTTGTTGAGGGGGGGAGGAGGGGTGTGATATTGACCTTTTTGTAGTACTGAAACGTCTGAAAGTTTGACCATAAGTCACTTACTAAATGCTATTCCCCTATCCTCAAATGACTTTCTTATTTGGTTATTTGTCTCGCCTTTTGATTGCTCATTTGTTGAAGAGGTGTTAAGTTATAGATTCAAAGAATAACTAAACCTCACAAGTCACAACTTGTCAAAATTCCAAATCTTAGCCTTTTTTTTTCCTACTGAAAAGAGAAATCATAACTGTCTACTCAGAAGTGTTTCACGAAGATTTAAACCTAATTTTTCAATTGTGTGAAGTTGGATGATCAGCTTTGTAGATGGTTGACAAAGTCTAATAGTTTTTGGAGGTCACCATTGTCTAGTAGAGTTTTGCATAGGTGGTAGTATAATATCATAGAATGAAGCATTAGTCGGTGAATAAGAGTATAAGACTATTACTCTTTTCAGTGTTTCATTTCGTTTTTAATGAGGGGGACATGCAATACAAATCTCTTTCACTAATTCTTTGTATGTATTTCAAAGGCTCCTTTAGGAATTCAATTTGTCCAATAACATGTTTAATGTACAAACATTTAATATGCATGAGTTAAGAAGCCCTTTGTGACATACCCATTTCTTGGACGCCGATACTATTAATGTAAACATCAACTTGTCAGGACACTGGATATAAGTAGAATTCTAGTAATATTACTGTGCGCAACTTCTTGGCACTTGCTGGGTTGCATATGTAGTGCCTTTTGCTACCTATTGGTTTGACATATGCGCATCACCCCTAGTGTACGAGCTCATTAAAGCTCCGAGGATTCGTTTTTACAACATTTTCTTTACTGTAAACTAGGAATCAATTCATGTTTTGTTGACATAGCTCTAACAAAGAAGAACCTTTACAGTTGTTGGGTTGAAGTTTCATATACTTAAACCCACCCTCCCCTTAGTTTGACTGAGGAGAAGCTGTGTGAGAAGGACTGTTTATGCTATTCTAGAATTTGTCGTGGCTGTTGAATATCTTGGTTGCTGCATTTTTGCTGTTCTAGATCTTCTATACGTGCAAAATTTCGAAGTGATGACATGATATTTTTTGAGACAGTCTACTGTTTTTAAGTTAGGTTATGTCCCATGTCCAAAGCTTGGGAGAGGTATTTGAAGTTAAATCAGAAAAATAGAAGAGAAAAGATGCCCGAAATAAGGGTTCATAGTTGTCATTATTATTTCTGGAGATAACATGAATACATGATAACACTTAACACCTGGTACTTTTATGAGTCATGTTCATGCATGGTCAATTGGTCATGGCCTTTTCATAGGACTTACATGAGTGAGTCTGTGAGAGTAAGTCTAGTTTANGGGGGGGGGGGGGGGGGGGGGATTCTTGGAATTGGGGTCACCTGTAGGTCATCATTAGTTCATTGGATTAAGAGGAAATGGAGGATCATTTAGACTGAGAGGTCCTCAGTTCACTGTTGCAGATAAAGGTATATTTGTTTCAATAGTTTGAATGCTTTCTCTTATTTTTGGCTATGTTATGCTACTCATAGGTTGACCGCTAGCGTTATGTGGTTTACATGGATTATTTTAATGCATTTGAAGTACCTTGTGCCTTTTCTTGCCTACTTAGCGTCTGAATGAGACTGGTATGGTTAGACATTGGTGTTGTGATAGAAATTTAGTCAGTTATTGACCTATAGTCCAGCTGCAGTAGGAGAGAGATGCGTTCTGCTAACTATCTCGAAGACTTTCTTGAGGTTTATTTGTTTTTTCAAGAGCCCTACCCTTTATCCTCAGATACCATTCTCATTGTCAACATACTGGTATTATAACGATGATAATGATAATGAGCAAGTGCATGACTGCACAGGCTGATGTGAGTTTGAAGCTGAGTTGTTGTCTACATTGGTATAATGATATGGGACTAAAAAGTGGACTGTGTACACAATTATCACTTAAAGTATTAGATACTATTTTTTGACAGAAGGATCCGATGCTATTAATTGCGATTAACAGGTGAATAGGTTTTAAGGAGATTGTGCCTGAAATTAAATCGATAATGGGTGGACTTGAAAAATCTTAAATTAGGACCTTATACTTGGTATACTTTAGGAAGACATATTACACGAAGTACTCCGTACATAGTATTTATATTGTTTGGAAACGGAACGTAAATGTTCCCATGTGCTGCTTATTTTCCAAAAGTATTCCTATTTGTTAGTTAAAATTGATCTTCTGATGAACTCTAAATGTAATTGGGAAATCTCTTTTCCCTGGGGAATTTTCTTAATGAAATGCAATGTCATATTACCAGTCATGGCCTAATTGCAACAAACTGCCTGTGTGAATTATGGAAGACGCTGACCCAGCTTGGCAATTGGTTCTTTAGAATAATTTGAAATTTGGATTAATTGTCACTATCATTTAAATGATTGTTTCTCTAAGCATTGAATTCTGTCATATCCTAGAGGAAGTTCTCTGCCAGTGAGGTTACATTTTTATTTAGGGAAGTGAGTGTTGGCCTCAATGTAAACTGTTGATATTAGTGTTGTCCTACTGTCACTTCTTAAGCTTGGAACCTACTTTCACTCTTAAGCTTGCAACCTCCCCTGCAGTAGGCGCACAAGTAGGACTTTATGGATTTACGGAGAAGTAGTAGCCTAGTTGGTAGTCACGGGAAGCCTTAAATCATCAAAAATTGTCTGATAAGACTACGAGAGAGGAGGGATGATTTTGGTTTGAATTTACAGCAATGTATGCAGTATGATGGTTGATGATATTTCTTTTGGGGGAAGTGATTGTGTTCGATCTTCAAGTGGCATAGGCTTTATAAAGATAGTGACACAGCTAATTGAAACGAATTCCAACAGTGTATTCGGTTGGTATTCACCTCTAGCTTAAGAGGTAGCAACTTTCGCAAAGCTACATTGGTGCATTTTGGTTGTTCCTGCATGAGAAGATTCCATGATAGTCTTGAACTACTGCCAATCACTTTAACAAATCCATCATTGTTTAGCAGGTGCAATGGTATTAATGATATTTCCAGCGGCTATTTTTACTTAAAAGTTGAAACTGATCACCCTGACTTGTGGTTTTGTCCAGAGCAGTATTTAGTTATAGCATATAGGCGTCAAATATGAAGCTTGTAGAATGGCTGGTTAAACTCGAAGAATATTTACATGTAGAGAATCTTTTATTCGGTAAAAGGGTCATTCCTGGAAGTATCTTGAAATCTGGATTTTACTACGTGTATGCCTTTCCTTAAGAAATTTTCTTCTCTCTGCAAAGAGCTTAACATTACTATTGCAGAAGTGATCATGCAACATGCCTATCTTCATTTGCTTATTAGTTCTGTTGCGAATTATATTTCCAGATATGCTTTCTGAAGTCTGAAATTACTTGTCTAAATTTAAGGCACATATGTTTTTGGCAAAATTTAAGGCGCATTTAAACTGCAGAGAAGTGTGATAACATTTCTACGTTGAACTGATATGGTAAGACAATTATTTTGCAGGTGCTACAGCGTGGCATACCTAGAAGACAGAAAGTACAATAGGTTAGCGCCTATTGGTGGCTTTGCATTTATAGCTGGCTGGGCTAGTTTGCTTTTCTGAAAGTTTAAGGTACAAAAAACAGCAATTGCATACTATCCTTTCCCCACACCCAAGTGCTCATGTGTTGAATAACTGATTATCGGCTACAAAATTTCTACTGAGACTGGTACAAATATCTCAAAATGACTGAGATTCTGCAATAATAATCGACTGTATATGAATGGGTTGTTATTTGTTAAGCTATAGAGTTATTTGAGCTTTACTTGTGTATGTTGAGTGCGCTAATGCGATGTATCGCAATATCATTGATCACTTCGAGTCTTGAAACCTTATTTCTTGAAGTGTATACGAAATGTTTACGTAACACCAACAAACTTGTAGCTTCCATTTACAACTTGAATTTCTTTTTTTGACATGATACAACTTGAATTTGAAGGAATGCTAAATAAGGTACTTTGTTA

mRNA sequence

AAAATTGTTGAGCAAAAAGCTGAAAATAAAAACGCAAATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTGCTACAGCGTGGCATACCTAGAAGACAGAAAGTACAATAGGTTAGCGCCTATTGGTGGCTTTGCATTTATAGCTGGCTGGGCTAGTTTGCTTTTCTGAAAGTTTAAGGTACAAAAAACAGCAATTGCATACTATCCTTTCCCCACACCCAAGTGCTCATGTGTTGAATAACTGATTATCGGCTACAAAATTTCTACTGAGACTGGTACAAATATCTCAAAATGACTGAGATTCTGCAATAATAATCGACTGTATATGAATGGGTTGTTATTTGTTAAGCTATAGAGTTATTTGAGCTTTACTTGTGTATGTTGAGTGCGCTAATGCGATGTATCGCAATATCATTGATCACTTCGAGTCTTGAAACCTTATTTCTTGAAGTGTATACGAAATGTTTACGTAACACCAACAAACTTGTAGCTTCCATTTACAACTTGAATTTCTTTTTTTGACATGATACAACTTGAATTTGAAGGAATGCTAAATAAGGTACTTTGTTA

Coding sequence (CDS)

ATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTGCTACAGCGTGGCATACCTAGAAGACAGAAAGTACAATAGGTTAGCGCCTATTGGTGGCTTTGCATTTATAGCTGGCTGGGCTAGTTTGCTTTTCTGA

Protein sequence

MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26205.1	Spo26205.1	mRNA

Homology

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BLAST of Spo26205.1 vs. NCBI nr
Match: gi|902200983|gb|KNA13870.1| (hypothetical protein SOVF_112670 [Spinacia oleracea])

HSP 1 Score: 232.6 bits (592), Expect = 3.200e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK
Sbjct: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF
Sbjct: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 111

[Close]

BLAST of Spo26205.1 vs. NCBI nr
Match: gi|731371198|ref|XP_010665968.1| (PREDICTED: transmembrane protein 256 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 213.8 bits (543), Expect = 1.600e-52
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHLVHTAALLA PMTK
Sbjct: 21  MDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHLVHTAALLAAPMTK 80

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
            PNIFGG MS GI+LFSGTCYSVAYLEDR+YNRLAPIGGFAFIAGW SLLF
Sbjct: 81  NPNIFGGFMSTGILLFSGTCYSVAYLEDRRYNRLAPIGGFAFIAGWTSLLF 131

[Close]

BLAST of Spo26205.1 vs. NCBI nr
Match: gi|870843247|gb|KMS96463.1| (hypothetical protein BVRB_9g225170 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 213.8 bits (543), Expect = 1.600e-52
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHLVHTAALLA PMTK
Sbjct: 1   MDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHLVHTAALLAAPMTK 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
            PNIFGG MS GI+LFSGTCYSVAYLEDR+YNRLAPIGGFAFIAGW SLLF
Sbjct: 61  NPNIFGGFMSTGILLFSGTCYSVAYLEDRRYNRLAPIGGFAFIAGWTSLLF 111

[Close]

BLAST of Spo26205.1 vs. NCBI nr
Match: gi|848859947|ref|XP_012830836.1| (PREDICTED: transmembrane protein 256 homolog [Erythranthe guttata])

HSP 1 Score: 196.4 bits (498), Expect = 2.600e-47
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHKVAA+SG  A+GLG+YGAHGFKPK P+YK+VW TASLYHLVHTAALLA P+T 
Sbjct: 1   MDPRLWHKVAALSGVAALGLGSYGAHGFKPKNPSYKEVWHTASLYHLVHTAALLAAPITS 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
            PNIFGGL++ GIV FSGTCY+VAYLEDR Y+RLAPIGGFAFI  WASLLF
Sbjct: 61  RPNIFGGLLTTGIVTFSGTCYAVAYLEDRTYSRLAPIGGFAFIGAWASLLF 111

[Close]

BLAST of Spo26205.1 vs. NCBI nr
Match: gi|1002848814|ref|XP_006650594.2| (PREDICTED: transmembrane protein 256 homolog isoform X2 [Oryza brachyantha])

HSP 1 Score: 194.5 bits (493), Expect = 9.800e-47
Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDP LWHKVAA+SG  A+GLG YGAH F+PK PAYK+VW TASLYHLVHTAALL  P+TK
Sbjct: 35  MDPMLWHKVAAVSGVAALGLGTYGAHMFRPKNPAYKEVWHTASLYHLVHTAALLGAPVTK 94

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           +PN+FGGL++AGIVLFSGTCY+VAYLEDRKY+  AP+GGFAFIA WASLLF
Sbjct: 95  HPNVFGGLLTAGIVLFSGTCYTVAYLEDRKYSSTAPLGGFAFIAAWASLLF 145

[Close]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2Y6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112670 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.300e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK
Sbjct: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF
Sbjct: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 111

[Close]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B909_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225170 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.100e-52
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHLVHTAALLA PMTK
Sbjct: 1   MDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHLVHTAALLAAPMTK 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
            PNIFGG MS GI+LFSGTCYSVAYLEDR+YNRLAPIGGFAFIAGW SLLF
Sbjct: 61  NPNIFGGFMSTGILLFSGTCYSVAYLEDRRYNRLAPIGGFAFIAGWTSLLF 111

[Close]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Match: A0A022RRY2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016693mg PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.800e-47
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPRLWHKVAA+SG  A+GLG+YGAHGFKPK P+YK+VW TASLYHLVHTAALLA P+T 
Sbjct: 1   MDPRLWHKVAALSGVAALGLGSYGAHGFKPKNPSYKEVWHTASLYHLVHTAALLAAPITS 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
            PNIFGGL++ GIV FSGTCY+VAYLEDR Y+RLAPIGGFAFI  WASLLF
Sbjct: 61  RPNIFGGLLTTGIVTFSGTCYAVAYLEDRTYSRLAPIGGFAFIGAWASLLF 111

[Close]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Match: M1A6E0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006126 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.900e-47
Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDP++WHK+AAISG  AVGLGAYGAHGFKP+ P YK+VW TASLYHLVHTAALLA P+TK
Sbjct: 33  MDPQIWHKIAAISGVAAVGLGAYGAHGFKPQNPTYKEVWHTASLYHLVHTAALLAAPITK 92

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           +PNIFGGL++ GI+ FSGTCY+VA LEDRKY+ LAP GGFAFIA WASLLF
Sbjct: 93  HPNIFGGLLTGGIMAFSGTCYAVALLEDRKYSTLAPFGGFAFIAAWASLLF 143

[Close]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Match: K4CEX6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.500e-46
Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDP++WHK+AAISG  AVGLGAYGAHGFKP+ P YK+VW TASLYHLVHTAALLA P+TK
Sbjct: 1   MDPQIWHKIAAISGVAAVGLGAYGAHGFKPQNPTYKEVWNTASLYHLVHTAALLAAPITK 60

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           +PNIFGGL++ GI+ FSG+CY+VA LEDRKY+ LAP+GGFAFIA WASLLF
Sbjct: 61  HPNIFGGLLTGGIMAFSGSCYAVALLEDRKYSTLAPLGGFAFIAAWASLLF 111

[Close]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Match: TM256_BUFGR (Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.000e-20
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1

		  
Query: 4   RLWHKVAAISGAVAVGLGAYGAHGFK--PKEPAYKQVWQTASLYHLVHTAALLATPMTKY 63
           R+W ++ A+SGA+AV  GAYGAHGF+   ++   K++++T + YH +H+ ALLA P  + 
Sbjct: 5   RVWGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRR 64

Query: 64  PNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASL 110
           P + G L+++GIVLFSGT Y  A   D    + AP GG   I GWA++
Sbjct: 65  PLLAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAAM 112

[Close]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Match: TM256_DANRE (Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.000e-16
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 1

		  
Query: 5   LWHKVAAISGAVAVGLGAYGAHGFKPKEPA--YKQVWQTASLYHLVHTAALLATPMTKYP 64
           L  +VA ISGA+AV  GAYGAHGF+  E +   ++++ TA+ YH  H+ ALL     + P
Sbjct: 6   LVQRVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKP 65

Query: 65  NIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASL 110
            + G ++  G+  F G  Y      D  +++LAPIGG   I GWA++
Sbjct: 66  ALAGVILLTGMGCFCGPLYHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

[Close]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Match: TM256_BOVIN (Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.400e-14
Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 1

		  
Query: 6   WHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIF 65
           + ++ A+SGA A+GL +YGAHG +  +   K+++   + +H +H+ ALLA P+ + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 66  GGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASL 110
           G L+++G  LF  T Y  A   D  +  LAP+GG   + GW +L
Sbjct: 68  GLLLASGTTLFCTTFYYQALSGDPSFQNLAPVGGSLLLLGWLAL 111

[Close]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Match: YWDK_BACSU (UPF0382 membrane protein YwdK OS=Bacillus subtilis (strain 168) GN=ywdK PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 3.200e-13
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1

		  
Query: 9   VAAISGAVAVGLGAYGAHGFKPKEP-AYKQVWQTASLYHLVHT-----AALLATPMTKYP 68
           + AI+  +AVGLGA+GAHG + K P  Y QVW T   YH+ H       A LA  ++   
Sbjct: 7   LGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIG 66

Query: 69  NIF--GGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLL 111
           ++   G LM AGIVLFSG+ Y ++  +      + P+GG AFI  W  ++
Sbjct: 67  SVTTAGWLMFAGIVLFSGSLYILSVTQISILGAITPLGGVAFIISWIMIV 116

[Close]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Match: TM256_MOUSE (Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.100e-13
Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = 1

		  
Query: 6   WHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIF 65
           + ++ A+SGA A+GL +YGAHG +  +   K+++  A+ +H +H+ ALL  P  + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 66  GGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           G L+++G  LF  + Y  A   D     L P+GG   I GW +L F
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDTSIQTLGPVGGSLLILGWLALAF 113

[Close]

BLAST of Spo26205.1 vs. TAIR (Arabidopsis)
Match: AT2G04900.1 (unknown protein)

HSP 1 Score: 188.7 bits (478), Expect = 1.900e-48
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 1

		  
Query: 1   MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60
           MDPR+WHKVAAISG  A+GLG YGAH FKP+ P+YKQVWQTASLYHLVHTAAL++ P TK
Sbjct: 18  MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61  YPNIFGGLMSAGIVLFSGTCYSVAYLEDRKYNRLAPIGGFAFIAGWASLLF 112
           YPNIFGGL++AGIV FSGTCY VA  EDRK++ LAP GGFAFIA WA+LLF
Sbjct: 78  YPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128

The following BLAST results are available for this feature:

BLAST of Spo26205.1 vs. NCBI nr
BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
BLAST of Spo26205.1 vs. TAIR (Arabidopsis)

BLAST of Spo26205.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902200983\|gb\|KNA13870.1\|	3.2e-58	100.	hypothetical protein SOVF_1126...	[more]
gi\|731371198\|ref\|XP_010665968.1\|	1.6e-52	89.1	PREDICTED: transmembrane prote...	[more]
gi\|870843247\|gb\|KMS96463.1\|	1.6e-52	89.1	hypothetical protein BVRB_9g22...	[more]
gi\|848859947\|ref\|XP_012830836.1\|	2.6e-47	80.1	PREDICTED: transmembrane prote...	[more]
gi\|1002848814\|ref\|XP_006650594.2\|	9.8e-47	78.3	PREDICTED: transmembrane prote...	[more]

BLAST of Spo26205.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9R2Y6_SPIOL	2.3e-58	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B909_BETVU	1.1e-52	89.1	Uncharacterized protein OS=Bet...	[more]
A0A022RRY2_ERYGU	1.8e-47	80.1	Uncharacterized protein OS=Ery...	[more]
M1A6E0_SOLTU	8.9e-47	78.3	Uncharacterized protein OS=Sol...	[more]
K4CEX6_SOLLC	1.5e-46	77.4	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo26205.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
TM256_BUFGR	2.0e-20	44.4	Transmembrane protein 256 homo...	[more]
TM256_DANRE	4.0e-16	40.1	Transmembrane protein 256 OS=D...	[more]
TM256_BOVIN	6.4e-14	36.5	Transmembrane protein 256 OS=B...	[more]
YWDK_BACSU	3.2e-13	40.0	UPF0382 membrane protein YwdK ...	[more]
TM256_MOUSE	7.1e-13	35.8	Transmembrane protein 256 OS=M...	[more]

BLAST of Spo26205.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G04900.1	1.9e-48	77.4	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006696	Protein of unknown function DUF423	PFAM	PF04241	DUF423	coord: 20..99 score: 2.6
None	No IPR available	PANTHER	PTHR10584	SUGAR KINASE	coord: 2..66 score: 3.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0051301	cell division
biological_process	GO:0048825	cotyledon development
biological_process	GO:0006281	DNA repair
biological_process	GO:0009880	embryonic pattern specification
biological_process	GO:0019915	lipid storage
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0010100	negative regulation of photomorphogenesis
biological_process	GO:0010072	primary shoot apical meristem specification
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0050826	response to freezing
biological_process	GO:0006396	RNA processing
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0009845	seed germination
biological_process	GO:0048575	short-day photoperiodism, flowering
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006284	base-excision repair
biological_process	GO:0009853	photorespiration
biological_process	GO:0009811	stilbene biosynthetic process
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0032259	methylation
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0048440	carpel development
biological_process	GO:0010048	vernalization response
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007165	signal transduction
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006820	anion transport
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0006508	proteolysis
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0045185	maintenance of protein location
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009809	lignin biosynthetic process
biological_process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0009536	plastid
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0045281	succinate dehydrogenase complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0000159	protein phosphatase type 2A complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0019888	protein phosphatase regulator activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0047763	caffeate O-methyltransferase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043916	DNA-7-methylguanine glycosylase activity
molecular_function	GO:0052821	DNA-7-methyladenine glycosylase activity
molecular_function	GO:0052822	DNA-3-methylguanine glycosylase activity
molecular_function	GO:0008725	DNA-3-methyladenine glycosylase activity
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0015267	channel activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26206	1.00	Barchart \| Table
Spo18143	0.75	Barchart \| Table
Spo13789	0.75	Barchart \| Table
Spo19658	0.73	Barchart \| Table
Spo24213	0.70	Barchart \| Table
Spo06277	0.69	Barchart \| Table
Spo05415	0.69	Barchart \| Table
Spo25779	0.68	Barchart \| Table
Spo06711	0.68	Barchart \| Table
Spo23067	0.68	Barchart \| Table
Spo24203	0.67	Barchart \| Table
Spo10211	0.67	Barchart \| Table
Spo13877	0.67	Barchart \| Table
Spo25346	0.67	Barchart \| Table
Spo06718	0.67	Barchart \| Table
Spo01183	0.66	Barchart \| Table
Spo14378	0.66	Barchart \| Table
Spo26313	0.66	Barchart \| Table
Spo08712	0.65	Barchart \| Table
Spo17039	0.65	Barchart \| Table