Spo26206 (gene)

Overview
NameSpo26206
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCDO504
LocationSpoScf_01890 : 86104 .. 86686 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAATTGTTGAGCAAAAAGCTGAAAATAAAAACGCAAATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGTAATTTCTCCCCTCCTCCCTTTCTCCATGACTCTATTCTGTAGTTTTGTTAAGCAACATCACTGATCACTGCATCACTGACAAAATCCAATTGCTGTTAAAATTTAGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTCAATTTCTACCTTATTTCTCCGCTTCTAAAATTGCCCATCTCACAGTTTATAGCATTCTTTCTGAAATTTCGGAAATTTTGATAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTGTATGTGTATTTTTCTTGTACAATTCAATCAATTTCTGTTTCTTGTTTGTTCAATTCAATTTTGTTCTAAATTTCCCCATTTTTTGGGGTTTGTTGTTGATTTCAGTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTAA

mRNA sequence

ATGCCAAAATTGTTGAGCAAAAAGCTGAAAATAAAAACGCAAATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTAA

Coding sequence (CDS)

ATGCCAAAATTGTTGAGCAAAAAGCTGAAAATAAAAACGCAAATGGATCCTCGTCTATGGCACAAAGTTGCTGCTATCTCTGGGGCAGTAGCTGTTGGATTAGGCGCATATGGTGCTCATGGATTCAAACCCAAAGAACCCGCCTATAAACAGGTTTGGCAAACAGCGTCCTTGTACCATTTGGTTCACACTGCAGCTTTGTTAGCTACCCCCATGACCAAATATCCTAACATTTTTGGAGGTCTGATGAGTGCTGGAATAGTCTTATTTTCAGGGACGTAA

Protein sequence

MPKLLSKKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIFGGLMSAGIVLFSGT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26206.1Spo26206.1mRNA


Homology
[Close]
BLAST of Spo26206.1 vs. NCBI nr
Match: gi|902200983|gb|KNA13870.1| (hypothetical protein SOVF_112670 [Spinacia oleracea])

HSP 1 Score: 164.9 bits (416), Expect = 6.900e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

		  

Query: 15 MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 74
          MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK
Sbjct: 1  MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60

Query: 75 YPNIFGGLMSAGIVLFSGT 94
          YPNIFGGLMSAGIVLFSGT
Sbjct: 61 YPNIFGGLMSAGIVLFSGT 79
[Close]
BLAST of Spo26206.1 vs. NCBI nr
Match: gi|731371198|ref|XP_010665968.1| (PREDICTED: transmembrane protein 256 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 161.0 bits (406), Expect = 1.000e-36
Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 1 

		  

Query: 3  KLLSKKLKIKTQ-MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHL 62
          KLLS+KLK++TQ MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHL
Sbjct: 8  KLLSRKLKVQTQTMDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHL 67

Query: 63 VHTAALLATPMTKYPNIFGGLMSAGIVLFSGT 94
          VHTAALLA PMTK PNIFGG MS GI+LFSGT
Sbjct: 68 VHTAALLAAPMTKNPNIFGGFMSTGILLFSGT 99
[Close]
BLAST of Spo26206.1 vs. NCBI nr
Match: gi|870843247|gb|KMS96463.1| (hypothetical protein BVRB_9g225170 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 148.7 bits (374), Expect = 5.100e-33
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 1 

		  

Query: 15 MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 74
          MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHLVHTAALLA PMTK
Sbjct: 1  MDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHLVHTAALLAAPMTK 60

Query: 75 YPNIFGGLMSAGIVLFSGT 94
           PNIFGG MS GI+LFSGT
Sbjct: 61 NPNIFGGFMSTGILLFSGT 79
[Close]
BLAST of Spo26206.1 vs. NCBI nr
Match: gi|565482350|ref|XP_006298815.1| (hypothetical protein CARUB_v10014921mg [Capsella rubella])

HSP 1 Score: 142.5 bits (358), Expect = 3.700e-31
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 1 

		  

Query: 7  KKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAA 66
          +  + +  MDPR+WHKVAA+SG  A+GLG YGAHGFKP+ P+YKQVWQTASLYHLVHTAA
Sbjct: 10 RDFRARRSMDPRIWHKVAAVSGMAALGLGTYGAHGFKPENPSYKQVWQTASLYHLVHTAA 69

Query: 67 LLATPMTKYPNIFGGLMSAGIVLFSGT 94
          L++ P TKYPNIFGGL++AGIV FSGT
Sbjct: 70 LVSAPTTKYPNIFGGLLTAGIVAFSGT 96
[Close]
BLAST of Spo26206.1 vs. NCBI nr
Match: gi|565394714|ref|XP_006363001.1| (PREDICTED: transmembrane protein 256 homolog [Solanum tuberosum])

HSP 1 Score: 140.6 bits (353), Expect = 1.400e-30
Identity = 64/91 (70.33%), Postives = 77/91 (84.62%), Query Frame = 1 

		  

Query: 3   KLLSKKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLV 62
           K  S K +  ++MDP++WHK+AAISG  AVGLGAYGAHGFKP+ P YK+VW TASLYHLV
Sbjct: 21  KTSSSKNQKSSKMDPQIWHKIAAISGVAAVGLGAYGAHGFKPQNPTYKEVWHTASLYHLV 80

Query: 63  HTAALLATPMTKYPNIFGGLMSAGIVLFSGT 94
           HTAALLA P+TK+PNIFGGL++ GI+ FSGT
Sbjct: 81  HTAALLAAPITKHPNIFGGLLTGGIMAFSGT 111
[Close]
BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2Y6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112670 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.800e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

		  

Query: 15 MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 74
          MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK
Sbjct: 1  MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 60

Query: 75 YPNIFGGLMSAGIVLFSGT 94
          YPNIFGGLMSAGIVLFSGT
Sbjct: 61 YPNIFGGLMSAGIVLFSGT 79
[Close]
BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B909_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225170 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.600e-33
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 1 

		  

Query: 15 MDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTK 74
          MDPRLWHK+AAISGA+AVGLGAYGAHGFKP +PAYKQVW TASLYHLVHTAALLA PMTK
Sbjct: 1  MDPRLWHKIAAISGALAVGLGAYGAHGFKPNDPAYKQVWHTASLYHLVHTAALLAAPMTK 60

Query: 75 YPNIFGGLMSAGIVLFSGT 94
           PNIFGG MS GI+LFSGT
Sbjct: 61 NPNIFGGFMSTGILLFSGT 79
[Close]
BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Match: R0I5R7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014921mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.600e-31
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 1 

		  

Query: 7  KKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAA 66
          +  + +  MDPR+WHKVAA+SG  A+GLG YGAHGFKP+ P+YKQVWQTASLYHLVHTAA
Sbjct: 10 RDFRARRSMDPRIWHKVAAVSGMAALGLGTYGAHGFKPENPSYKQVWQTASLYHLVHTAA 69

Query: 67 LLATPMTKYPNIFGGLMSAGIVLFSGT 94
          L++ P TKYPNIFGGL++AGIV FSGT
Sbjct: 70 LVSAPTTKYPNIFGGLLTAGIVAFSGT 96
[Close]
BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Match: M1A6E0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006126 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.800e-31
Identity = 64/91 (70.33%), Postives = 77/91 (84.62%), Query Frame = 1 

		  

Query: 3   KLLSKKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLV 62
           K  S K +  ++MDP++WHK+AAISG  AVGLGAYGAHGFKP+ P YK+VW TASLYHLV
Sbjct: 21  KTSSSKNQKSSKMDPQIWHKIAAISGVAAVGLGAYGAHGFKPQNPTYKEVWHTASLYHLV 80

Query: 63  HTAALLATPMTKYPNIFGGLMSAGIVLFSGT 94
           HTAALLA P+TK+PNIFGGL++ GI+ FSGT
Sbjct: 81  HTAALLAAPITKHPNIFGGLLTGGIMAFSGT 111
[Close]
BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Match: D7L8K1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899300 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.800e-30
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 1 

		  

Query: 7  KKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAA 66
          + ++ +  MDPR+WHKVAAISG  A+GLG YGAH FKP+ P+YKQVWQTASLYHLVHTAA
Sbjct: 10 RDIRGRRSMDPRIWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAA 69

Query: 67 LLATPMTKYPNIFGGLMSAGIVLFSGT 94
          L++ P TKYPNIFGGL++AGIV FSGT
Sbjct: 70 LVSAPSTKYPNIFGGLLTAGIVAFSGT 96
[Close]
BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Match: TM256_BUFGR (Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.100e-14
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 1 

		  

Query: 18 RLWHKVAAISGAVAVGLGAYGAHGFK--PKEPAYKQVWQTASLYHLVHTAALLATPMTKY 77
          R+W ++ A+SGA+AV  GAYGAHGF+   ++   K++++T + YH +H+ ALLA P  + 
Sbjct: 5  RVWGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRR 64

Query: 78 PNIFGGLMSAGIVLFSGT 94
          P + G L+++GIVLFSGT
Sbjct: 65 PLLAGSLLTSGIVLFSGT 82
[Close]
BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Match: TM256_DANRE (Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.400e-8
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1 

		  

Query: 19 LWHKVAAISGAVAVGLGAYGAHGFKPKEPA--YKQVWQTASLYHLVHTAALLATPMTKYP 78
          L  +VA ISGA+AV  GAYGAHGF+  E +   ++++ TA+ YH  H+ ALL     + P
Sbjct: 6  LVQRVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKP 65

Query: 79 NIFGGLMSAGIVLFSG 93
           + G ++  G+  F G
Sbjct: 66 ALAGVILLTGMGCFCG 81
[Close]
BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Match: YWDK_BACSU (UPF0382 membrane protein YwdK OS=Bacillus subtilis (strain 168) GN=ywdK PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 7.500e-8
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 1 

		  

Query: 23 VAAISGAVAVGLGAYGAHGFKPKEP-AYKQVWQTASLYHLVH-----TAALLATPMTKYP 82
          + AI+  +AVGLGA+GAHG + K P  Y QVW T   YH+ H       A LA  ++   
Sbjct: 7  LGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIG 66

Query: 83 NI--FGGLMSAGIVLFSGT 94
          ++   G LM AGIVLFSG+
Sbjct: 67 SVTTAGWLMFAGIVLFSGS 85
[Close]
BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Match: TM256_BOVIN (Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.800e-7
Identity = 27/74 (36.49%), Postives = 47/74 (63.51%), Query Frame = 1 

		  

Query: 20 WHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIF 79
          + ++ A+SGA A+GL +YGAHG +  +   K+++   + +H +H+ ALLA P+ + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 80 GGLMSAGIVLFSGT 94
          G L+++G  LF  T
Sbjct: 68 GLLLASGTTLFCTT 81
[Close]
BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Match: TM256_MOUSE (Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.800e-6
Identity = 26/71 (36.62%), Postives = 45/71 (63.38%), Query Frame = 1 

		  

Query: 20 WHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAALLATPMTKYPNIF 79
          + ++ A+SGA A+GL +YGAHG +  +   K+++  A+ +H +H+ ALL  P  + P   
Sbjct: 8  FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 80 GGLMSAGIVLF 91
          G L+++G  LF
Sbjct: 68 GLLLASGTTLF 78
[Close]
BLAST of Spo26206.1 vs. TAIR (Arabidopsis)
Match: AT2G04900.1 (unknown protein)

HSP 1 Score: 139.0 bits (349), Expect = 1.400e-33
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 1 

		  

Query: 7  KKLKIKTQMDPRLWHKVAAISGAVAVGLGAYGAHGFKPKEPAYKQVWQTASLYHLVHTAA 66
          + ++ +  MDPR+WHKVAAISG  A+GLG YGAH FKP+ P+YKQVWQTASLYHLVHTAA
Sbjct: 10 RDIRGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAA 69

Query: 67 LLATPMTKYPNIFGGLMSAGIVLFSGT 94
          L++ P TKYPNIFGGL++AGIV FSGT
Sbjct: 70 LVSAPSTKYPNIFGGLLTAGIVAFSGT 96
The following BLAST results are available for this feature:
BLAST of Spo26206.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902200983|gb|KNA13870.1|6.9e-38100.hypothetical protein SOVF_1126... [more]
gi|731371198|ref|XP_010665968.1|1.0e-3684.7PREDICTED: transmembrane prote... [more]
gi|870843247|gb|KMS96463.1|5.1e-3387.3hypothetical protein BVRB_9g22... [more]
gi|565482350|ref|XP_006298815.1|3.7e-3172.4hypothetical protein CARUB_v10... [more]
gi|565394714|ref|XP_006363001.1|1.4e-3070.3PREDICTED: transmembrane prote... [more]
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BLAST of Spo26206.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R2Y6_SPIOL4.8e-38100.Uncharacterized protein OS=Spi... [more]
A0A0J8B909_BETVU3.6e-3387.3Uncharacterized protein OS=Bet... [more]
R0I5R7_9BRAS2.6e-3172.4Uncharacterized protein OS=Cap... [more]
M1A6E0_SOLTU9.8e-3170.3Uncharacterized protein OS=Sol... [more]
D7L8K1_ARALL2.8e-3072.4Putative uncharacterized prote... [more]
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BLAST of Spo26206.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TM256_BUFGR3.1e-1447.4Transmembrane protein 256 homo... [more]
TM256_DANRE3.4e-840.7Transmembrane protein 256 OS=D... [more]
YWDK_BACSU7.5e-845.5UPF0382 membrane protein YwdK ... [more]
TM256_BOVIN4.8e-736.4Transmembrane protein 256 OS=B... [more]
TM256_MOUSE1.8e-636.6Transmembrane protein 256 OS=M... [more]
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BLAST of Spo26206.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G04900.11.4e-3372.4unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006696Protein of unknown function DUF423PFAMPF04241DUF423coord: 34..93
score: 1.0
NoneNo IPR availablePANTHERPTHR10584SUGAR KINASEcoord: 16..80
score: 3.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0009060 aerobic respiration
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0006281 DNA repair
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0019915 lipid storage
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0009909 regulation of flower development
biological_process GO:0050826 response to freezing
biological_process GO:0006396 RNA processing
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006284 base-excision repair
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0009635 response to herbicide
biological_process GO:0048440 carpel development
biological_process GO:0010048 vernalization response
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007165 signal transduction
biological_process GO:0044070 regulation of anion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006820 anion transport
biological_process GO:0008152 metabolic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0018920 glyphosate metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0045185 maintenance of protein location
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0009536 plastid
cellular_component GO:0005750 mitochondrial respiratory chain complex III
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015267 channel activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0052822 DNA-3-methylguanine glycosylase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0008725 DNA-3-methyladenine glycosylase activity
molecular_function GO:0052821 DNA-7-methyladenine glycosylase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0043916 DNA-7-methylguanine glycosylase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0047763 caffeate O-methyltransferase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0008308 voltage-gated anion channel activity
RNA-Seq Expression