Spo26304 (gene) | SpinachBase

Overview


Name	Spo26304
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Hydroxyproline-rich glycoprotein family protein
Location	chr4 : 90296774 .. 90298223 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTAGGCTTAAGCATTATCAGACGTACTGCGGTTCATGTTATTGGAGCAGAAACGGTAGTTTCCCTTGTCTATCCATACTGCACACAATATCATCCATACTGCTAATGTTTGCATAGTGAACATGAGATGTAAATTAATAGTTTCTCACACTTGAATTATTCTACTTATTAAGGGTGAAACTACTTGTTATGAAATTGTGTACACTGAAAGAAACCTTAATTATTCATACCTTTTGTGTATTCTTCATTGCTCATGTACTCTGTGTGACATCGATTTATGACATCAGGTACATGGAGAGTGTGAGGTCATATATTACATATCTAAACCTCGGTTCGAGAACCCAGGCAACAAGTTGTTTAGGATATCTTGCAATACATCAATGATAAGCTAATTATATGATTCACTAGATTTCCCTCTTGATACATCAATGATAACCTGTTAATCATGAAACAAGAACTTTAAAACACGAGAGTGCATTGGTGCTGAAAAGAACTTTCATATGTACTCGCCCATATCTTTTCCCATGAACTCTTCACTCTCTATATTTTCTGCTGACTTATGCATACTTGGCTTTGGCAATAACCCATAACTACTTGGAGATCTAGGAAGGCTTCTCAGTTTTAATTATTTGTTTTATTTTTATGTTCTGTCTTTTTTTTGAGGGAATGTTCTTCTGTCTTTTTAAAATTCTTGCATAATCGTATGATATTATATATTTCTTTCCCGTCCAATCGTCCATTGATTGTCTTGACCATTACTCCGTATGTGGTACTGGTGTTATGTGTTTCATAATGAAAAAATGCTAGTTTTATTATTTCGAGAACTGTGATAATCATCTGATATTTGGATATTTGCAGAGAAATGTGAAAGATAGCCATGAAGATTCTTTTATAAGAGAAAAGAGGATCATCGGGCAATCAGCCCCACTGTTTACTCTGCAGAAATTCAAACCAGCTGAAAAGATAAGACAATTGCAGACATCGTCTTCAAGGAAGTTTCATTCTTATGCTTTGCCTAAACCAGGTGATACAACTAGGATTTCTGCTAGATCTGAGAATCGTGTTTTAAGCACCAAGCCAAATCCTCTGCTTGCTGAAAATTTATATCATTCACCCTCTCTGGTGCCGAACACGTATGAAAATCTTGTACGAACTGAAATGCATAACTTCCATGCATAAAGCTGAGGTTGCTAGAGAGGAGACAGAGTTGGGATTCTATATTGATTTGACGCCCTGTTGTTATCCATTGATTGTATTCTTTGTTAGATAATTTTTTGCAAAGTATTAGGTTTTATATTTGAGGGAGTTTTGATGTAATCATACCCATGTAAATGATATTTTTTTATTCATATTTTTTGAAATATAATAAGTTAACGTGAAAATATTCCCTATTGCTGCTATGGAAGCTGCCGAAGCTAGCTTGTTATAGCAGCGTTTTTTTAATA

mRNA sequence

ATGGTGGTAGGCTTAAGCATTATCAGACGTACTGCGGTTCATGTTATTGGAGCAGAAACGAGAAATGTGAAAGATAGCCATGAAGATTCTTTTATAAGAGAAAAGAGGATCATCGGGCAATCAGCCCCACTGTTTACTCTGCAGAAATTCAAACCAGCTGAAAAGATAAGACAATTGCAGACATCGTCTTCAAGGAAGTTTCATTCTTATGCTTTGCCTAAACCAGGTGATACAACTAGGATTTCTGCTAGATCTGAGAATCGTGTTTTAAGCACCAAGCCAAATCCTCTGCTTGCTGAAAATTTATATCATTCACCCTCTCTGGTGCCGAACACGTATGAAAATCTTGTACGAACTGAAATGCATAACTTCCATGCATAAAGCTGAGGTTGCTAGAGAGGAGACAGAGTTGGGATTCTATATTGATTTGACGCCCTGTTGTTATCCATTGATTGTATTCTTTGTTAGATAATTTTTTGCAAAGTATTAGGTTTTATATTTGAGGGAGTTTTGATGTAATCATACCCATGTAAATGATATTTTTTTATTCATATTTTTTGAAATATAATAAGTTAACGTGAAAATATTCCCTATTGCTGCTATGGAAGCTGCCGAAGCTAGCTTGTTATAGCAGCGTTTTTTTAATA

Coding sequence (CDS)

ATGGTGGTAGGCTTAAGCATTATCAGACGTACTGCGGTTCATGTTATTGGAGCAGAAACGAGAAATGTGAAAGATAGCCATGAAGATTCTTTTATAAGAGAAAAGAGGATCATCGGGCAATCAGCCCCACTGTTTACTCTGCAGAAATTCAAACCAGCTGAAAAGATAAGACAATTGCAGACATCGTCTTCAAGGAAGTTTCATTCTTATGCTTTGCCTAAACCAGGTGATACAACTAGGATTTCTGCTAGATCTGAGAATCGTGTTTTAAGCACCAAGCCAAATCCTCTGCTTGCTGAAAATTTATATCATTCACCCTCTCTGGTGCCGAACACGTATGAAAATCTTGTACGAACTGAAATGCATAACTTCCATGCATAA

Protein sequence

MVVGLSIIRRTAVHVIGAETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTRISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTEMHNFHA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26304.1	Spo26304.1	mRNA

Homology

[Close]

BLAST of Spo26304.1 vs. NCBI nr
Match: gi|902217401|gb|KNA17684.1| (hypothetical protein SOVF_077670 [Spinacia oleracea])

HSP 1 Score: 201.8 bits (512), Expect = 6.900e-49
Identity = 103/106 (97.17%), Postives = 103/106 (97.17%), Query Frame = 1


		  
Query: 21  RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 80
           RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR
Sbjct: 8   RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 67

Query: 81  ISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTEMHNFHA 127
           ISARSENRVLSTKPNPLLAEN YHSPSLVPNTYE LVRTEMHN HA
Sbjct: 68  ISARSENRVLSTKPNPLLAEN-YHSPSLVPNTYEKLVRTEMHNLHA 112

[Close]

BLAST of Spo26304.1 vs. NCBI nr
Match: gi|902231556|gb|KNA22315.1| (hypothetical protein SOVF_035160 [Spinacia oleracea])

HSP 1 Score: 193.4 bits (490), Expect = 2.500e-46
Identity = 100/124 (80.65%), Postives = 108/124 (87.10%), Query Frame = 1


		  
Query: 5   LSIIRRTAVHVIGAETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPA--EKIRQLQTS 64
           + + ++    ++  E RNVKDSHEDSFIREKRIIGQSAPLFTLQKFK A  EKIRQLQTS
Sbjct: 1   MKLFQKNICKILIFEQRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKTADLEKIRQLQTS 60

Query: 65  SSRKFHSYALPKPGDTTRISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTEMH 124
           SSRKFHSY LPKPGDT+RISARSENRVLSTKPN +LAENLYHSPSLVPNTYE LVRTEMH
Sbjct: 61  SSRKFHSYDLPKPGDTSRISARSENRVLSTKPNHVLAENLYHSPSLVPNTYEKLVRTEMH 120

Query: 125 NFHA 127
           N HA
Sbjct: 121 NSHA 124

[Close]

BLAST of Spo26304.1 vs. NCBI nr
Match: gi|902236106|gb|KNA24211.1| (hypothetical protein SOVF_017590 [Spinacia oleracea])

HSP 1 Score: 165.2 bits (417), Expect = 7.200e-38
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1


		  
Query: 21  RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 80
           +NVKDS+EDSFIREKRI+ QSAPLFT +K +PAEKI+QLQ SSS+KFHSYALPKPGDT+R
Sbjct: 296 KNVKDSNEDSFIREKRILSQSAPLFTQRKSEPAEKIKQLQPSSSKKFHSYALPKPGDTSR 355

Query: 81  ISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTE 121
           ISARSENRV STKPNPL AENLYHS  LVPNTYE LVRTE
Sbjct: 356 ISARSENRVSSTKPNPLQAENLYHSSPLVPNTYEKLVRTE 395

[Close]

BLAST of Spo26304.1 vs. NCBI nr
Match: gi|731343014|ref|XP_010682679.1| (PREDICTED: uncharacterized protein At2g33490-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 118.2 bits (295), Expect = 1.000e-23
Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 1


		  
Query: 22  NVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTRI 81
           NVK+SHEDSF+++++I+ QSAPLF  +KF+PAE+IRQL+ SSSRK +SY LPKPGD +RI
Sbjct: 296 NVKNSHEDSFVKDRKILSQSAPLFPQRKFEPAERIRQLRPSSSRKINSYVLPKPGDVSRI 355

Query: 82  SARSENRVLSTKPNPLL---AENLYHSPSLVPNTYENLVRTE 121
           SA S+  V  T+    L   +ENLYHS  L PNTYE LV TE
Sbjct: 356 SAGSQISVSQTQTRSNLNMHSENLYHSYPLQPNTYEKLVGTE 397

[Close]

BLAST of Spo26304.1 vs. NCBI nr
Match: gi|449445582|ref|XP_004140551.1| (PREDICTED: uncharacterized protein At2g33490 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 2.900e-10
Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 1


		  
Query: 12  AVHVIGAETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYA 71
           A H + A   N+  +  +SF    R + QSAPLF  +KF  AE++RQ++ SS+RKFH+Y 
Sbjct: 299 AFHHVEALKENLDRNRRNSFSFGGRTVSQSAPLFPDKKFDAAERVRQMRPSSTRKFHTYV 358

Query: 72  LPKPGDTTRISARSENRVLSTKPNPLLAENLY-HSPSLVPNTYENLVRTEMHNFH 126
           LP P DT   ++R     L      +  +NL  HS  L P  Y+ LV  E  + H
Sbjct: 359 LPTPADTKGSNSRVPGNPLPNTIQTIRQQNLMRHSSPLEPRNYDKLVGDENASGH 413

[Close]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFE1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077670 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.800e-49
Identity = 103/106 (97.17%), Postives = 103/106 (97.17%), Query Frame = 1


		  
Query: 21  RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 80
           RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR
Sbjct: 8   RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 67

Query: 81  ISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTEMHNFHA 127
           ISARSENRVLSTKPNPLLAEN YHSPSLVPNTYE LVRTEMHN HA
Sbjct: 68  ISARSENRVLSTKPNPLLAEN-YHSPSLVPNTYEKLVRTEMHNLHA 112

[Close]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRZ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035160 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.700e-46
Identity = 100/124 (80.65%), Postives = 108/124 (87.10%), Query Frame = 1


		  
Query: 5   LSIIRRTAVHVIGAETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPA--EKIRQLQTS 64
           + + ++    ++  E RNVKDSHEDSFIREKRIIGQSAPLFTLQKFK A  EKIRQLQTS
Sbjct: 1   MKLFQKNICKILIFEQRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKTADLEKIRQLQTS 60

Query: 65  SSRKFHSYALPKPGDTTRISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTEMH 124
           SSRKFHSY LPKPGDT+RISARSENRVLSTKPN +LAENLYHSPSLVPNTYE LVRTEMH
Sbjct: 61  SSRKFHSYDLPKPGDTSRISARSENRVLSTKPNHVLAENLYHSPSLVPNTYEKLVRTEMH 120

Query: 125 NFHA 127
           N HA
Sbjct: 121 NSHA 124

[Close]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXH0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_017590 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.000e-38
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1


		  
Query: 21  RNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTR 80
           +NVKDS+EDSFIREKRI+ QSAPLFT +K +PAEKI+QLQ SSS+KFHSYALPKPGDT+R
Sbjct: 296 KNVKDSNEDSFIREKRILSQSAPLFTQRKSEPAEKIKQLQPSSSKKFHSYALPKPGDTSR 355

Query: 81  ISARSENRVLSTKPNPLLAENLYHSPSLVPNTYENLVRTE 121
           ISARSENRV STKPNPL AENLYHS  LVPNTYE LVRTE
Sbjct: 356 ISARSENRVSSTKPNPLQAENLYHSSPLVPNTYEKLVRTE 395

[Close]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C559_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150000 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.000e-24
Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 1


		  
Query: 22  NVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYALPKPGDTTRI 81
           NVK+SHEDSF+++++I+ QSAPLF  +KF+PAE+IRQL+ SSSRK +SY LPKPGD +RI
Sbjct: 296 NVKNSHEDSFVKDRKILSQSAPLFPQRKFEPAERIRQLRPSSSRKINSYVLPKPGDVSRI 355

Query: 82  SARSENRVLSTKPNPLL---AENLYHSPSLVPNTYENLVRTE 121
           SA S+  V  T+    L   +ENLYHS  L PNTYE LV TE
Sbjct: 356 SAGSQISVSQTQTRSNLNMHSENLYHSYPLQPNTYEKLVGTE 397

[Close]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K9I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091980 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.000e-10
Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 1


		  
Query: 12  AVHVIGAETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKPAEKIRQLQTSSSRKFHSYA 71
           A H + A   N+  +  +SF    R + QSAPLF  +KF  AE++RQ++ SS+RKFH+Y 
Sbjct: 299 AFHHVEALKENLDRNRRNSFSFGGRTVSQSAPLFPDKKFDAAERVRQMRPSSTRKFHTYV 358

Query: 72  LPKPGDTTRISARSENRVLSTKPNPLLAENLY-HSPSLVPNTYENLVRTEMHNFH 126
           LP P DT   ++R     L      +  +NL  HS  L P  Y+ LV  E  + H
Sbjct: 359 LPTPADTKGSNSRVPGNPLPNTIQTIRQQNLMRHSSPLEPRNYDKLVGDENASGH 413

[Close]

BLAST of Spo26304.1 vs. ExPASy Swiss-Prot
Match: Y2349_ARATH (Uncharacterized protein At2g33490 OS=Arabidopsis thaliana GN=At2g33490 PE=4 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.500e-6
Identity = 33/95 (34.74%), Postives = 56/95 (58.95%), Query Frame = 1


		  
Query: 19  ETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKP-AEKIRQLQTSSSRKFHSYALPKPGD 78
           E  N + SH  SF R+ R + QSAPLF   +  P +EK+ +++++ +RKF++YALP P +
Sbjct: 311 EEGNYRKSH--SFRRDVRAVSQSAPLFPENRTTPPSEKLLRMRSTLTRKFNTYALPTPVE 370

Query: 79  TTR----ISARSENRVLSTKPNPLLAENLYHSPSL 109
           TTR     ++     V S+ P   + + +++S  L
Sbjct: 371 TTRSPSSTTSPGHKNVGSSNPTKAITKQIWYSSPL 403

[Close]

BLAST of Spo26304.1 vs. TAIR (Arabidopsis)
Match: AT2G33490.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-7
Identity = 33/95 (34.74%), Postives = 56/95 (58.95%), Query Frame = 1


		  
Query: 19  ETRNVKDSHEDSFIREKRIIGQSAPLFTLQKFKP-AEKIRQLQTSSSRKFHSYALPKPGD 78
           E  N + SH  SF R+ R + QSAPLF   +  P +EK+ +++++ +RKF++YALP P +
Sbjct: 311 EEGNYRKSH--SFRRDVRAVSQSAPLFPENRTTPPSEKLLRMRSTLTRKFNTYALPTPVE 370

Query: 79  TTR----ISARSENRVLSTKPNPLLAENLYHSPSL 109
           TTR     ++     V S+ P   + + +++S  L
Sbjct: 371 TTRSPSSTTSPGHKNVGSSNPTKAITKQIWYSSPL 403

The following BLAST results are available for this feature:

BLAST of Spo26304.1 vs. NCBI nr
BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
BLAST of Spo26304.1 vs. ExPASy Swiss-Prot
BLAST of Spo26304.1 vs. TAIR (Arabidopsis)

BLAST of Spo26304.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902217401\|gb\|KNA17684.1\|	6.9e-49	97.1	hypothetical protein SOVF_0776...	[more]
gi\|902231556\|gb\|KNA22315.1\|	2.5e-46	80.6	hypothetical protein SOVF_0351...	[more]
gi\|902236106\|gb\|KNA24211.1\|	7.2e-38	83.0	hypothetical protein SOVF_0175...	[more]
gi\|731343014\|ref\|XP_010682679.1\|	1.0e-23	60.7	PREDICTED: uncharacterized pro...	[more]
gi\|449445582\|ref\|XP_004140551.1\|	2.9e-10	38.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo26304.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RFE1_SPIOL	4.8e-49	97.1	Uncharacterized protein OS=Spi...	[more]
A0A0K9RRZ2_SPIOL	1.7e-46	80.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9RXH0_SPIOL	5.0e-38	83.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8C559_BETVU	7.0e-24	60.7	Uncharacterized protein OS=Bet...	[more]
A0A0A0K9I2_CUCSA	2.0e-10	38.2	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo26304.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
Y2349_ARATH	2.5e-6	34.7	Uncharacterized protein At2g33...	[more]

BLAST of Spo26304.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G33490.1	1.4e-7	34.7	hydroxyproline-rich glycoprote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34119	FAMILY NOT NAMED	coord: 30..121 score: 4.2
None	No IPR available	PANTHER	PTHR34119:SF2	SUBFAMILY NOT NAMED	coord: 30..121 score: 4.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006810	transport
biological_process	GO:0006474	N-terminal protein amino acid acetylation
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0009555	pollen development
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006412	translation
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0007033	vacuole organization
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0071554	cell wall organization or biogenesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0006950	response to stress
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007030	Golgi organization
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0008654	phospholipid biosynthetic process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0031248	protein acetyltransferase complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000325	plant-type vacuole
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain
molecular_function	GO:0004596	peptide alpha-N-acetyltransferase activity
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0008553	proton-exporting ATPase activity, phosphorylative mechanism
molecular_function	GO:0020037	heme binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0004602	glutathione peroxidase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22436	0.73	Barchart \| Table
Spo17344	0.70	Barchart \| Table
Spo03416	0.69	Barchart \| Table
Spo20912	0.69	Barchart \| Table
Spo01187	0.68	Barchart \| Table
Spo25659	0.68	Barchart \| Table
Spo15585	0.68	Barchart \| Table
Spo11980	0.67	Barchart \| Table
Spo07685	0.67	Barchart \| Table
Spo11435	0.67	Barchart \| Table
Spo21600	0.67	Barchart \| Table
Spo24935	0.67	Barchart \| Table
Spo24146	0.67	Barchart \| Table
Spo26013	0.66	Barchart \| Table
Spo02648	0.66	Barchart \| Table
Spo05444	0.66	Barchart \| Table
Spo05621	0.66	Barchart \| Table
Spo16804	0.66	Barchart \| Table
Spo18027	0.66	Barchart \| Table
Spo18285	0.66	Barchart \| Table
Spo19217	0.66	Barchart \| Table
Spo21833	0.66	Barchart \| Table
Spo23459	0.66	Barchart \| Table
Spo23745	0.66	Barchart \| Table
Spo24736	0.66	Barchart \| Table
Spo17726	0.65	Barchart \| Table
Spo14393	0.65	Barchart \| Table
Spo11688	0.65	Barchart \| Table