Spo26381 (gene)

Overview
NameSpo26381
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTranslation initiation factor IF-2
LocationSpoScf_01201 : 109435 .. 112520 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACCCAACCTAAAAGCTCAAAAGTAGCGGAGTAACATTTTTGGAACCTCTAATTCCTAGTATCGATTCAAAAATTTCACCATTAACAAGCAAAAGTACTACACAAAACCCTTGTTTGTTCACCATTCCAAACATTTTCCATTTCCTTTCTCCTCTAATTGGGCGGTGTGGAAATGCCTTCAGAAGACGCAAAACCATTGAAGAAAGAGGAGCTTGAAGACGACGAAGACGATGACGAGGTGCCTATTTCTGTAACCCGCAACAAAAACAAGAAACCCAGTAATTCTCCTGCAACTGCGACGCCCAAGCCGAAACCCAAAGTGACTAAAAAAGAAGAAGATTCAAGCGACGACGATGTCCCTCTGAAGAAACCAACTCCTAAATCAACCAAACCCAAAAAGGAAGAAGTTGATACTAAGAAAATTGTTGCCAAAGATGACAAGGTTTGTCTCTCCTTTCCAATTTCTTTTGGGTTTGTTGTAATTTTAATTTAATTTCTGGGTTGTTGTAATTTTGATTGTTTCTATGTGTTTTTTTCTGGGTTTGTTGTAATTTTAATTATATTTGCGATTTCTTCTGGGGTTTTAGAAAAAAATCAAGAAGAAAAAGGAGGAGGAAACGGTGAAGATTGAGGTGAAGAAGAGGGAGAGAAAGGTGTATAGTTTACCTGGGCAAAAACGCGATCCTCCTGAAGAAGTAAGCTCTAACAATTTTGGTTTTTGTAAATAAAATAATTTTGTAGGTGTTTTGATTTTATAATGTGAGTGATATCTCATTATCTTGTTTGCAGAGAGATCCTTTGAGGATTTTCTATGAGACATTGTATCAGCAAGTGCCCACCAGTGAACTGGCTGCAATTTGGTGAGCATTTTTTCATTTCTAATTAAGACATTATTGTTTATTACTTCTATGAGTAGTTTATAATGTAATATGAGATTGAAAAGAGGAAGATCGAATAGACTGAATGTTGTGTACTAACAGAGAGGAAAGGGGTAATCTTTTCCAGTTGTCTAACCTTCCTCATTATGCTTGCACGAAATGATAAACTTTGGTAGAACTTGCAATTTGTAATTTTAGAGTTTATGATTTTTGTATGGTTCTTGCAATTTGCAAATGTCTCTTAAGGTTATGGTTAGGAAAAGCTGCCCAATAGTAAACCTTTACATGCCTCAAGGGCCAAGCTTTCCATTTTCCGAGGATTCTCCTGCTTGAGGGCTCAGGGTATTGTAGTGACTTAGTCCCTGGAATTTTTATGGATTATGTTACTTTGTCAGCTTCGTTAATGTATTTGAGACTTGAGAAATCAATTTTACATCAGCGTTTGCTGTTATTTTATTGGCACTCAGTGTGCATTGACACAGTAGGCCTATTTTATGGTGTTCTGATGTAGCTGAAGTTCCTCCTTTTCTGAACCAAATTATTATGTTTCTTTTTTTCTTGTAATATGTCTTTCCAAAGTTTGTCCTCTGATGACTATCCACTTTCAATTTGCTTGATTTTCCATTCCTATTGACTAAAGTCAACCAGTAATTTCTTACATATAATCTTCACTCTTTAAATTTATTTCAGATTGAATTCAGGTGTATGTCTTTGTTGAGTCGTTGTAGTAGTTGGTTTGTTAATCTGTTGGGAGTTACAGATAACGTTATTCTTCCTCCATTTTTTAATAATTGCACCATTTGGGTTTTAACACTATTCCTATATTCTTATATAGTCATTTTTTTGTGATTTATATGTGGGAAAAATATATTCATGTGAGATCTTGTTAGATTCGTCTCGAAATATAATTTCAAATTATCAATTTTTTTTAATTTTTTAAAATGTATAATGAGCGATATTAGTATTTAAAATAGTACATTAGCAAGCGTGAAATCTCAAATGGCGCAATTATAAAAAAAATGGAGGAAGTATATGATTTTTTTCTTAGTATTATAGAATCACCGTTGCATCATATCTATAAGTTTAACACTTAAACTGTTAAGTTATTTGCAAGTTTGAAAAAGTTGAAATTGAATTTCTTGAGATGCTACGTTGGCCTTTTAAATTGACACCGTAGTTAGTGTTTAATCTTGAAACCTGAGAAGCACATCATTGTTTGAAGCCGCATCTTTGGCTAATAGAGTGTTTCACAGACTGAAGTCTTTTGTTAATTCTAACGTGAAAAGGTATGAAGTGCACAGCATGATTAATCATTACAGTTCATTACAGTTCATGGAAACTTTCTACTTGACGAGGCAGAGTTAGACTTAATATGATTAATCTGCAATAGTTACTTTTATGTTTATGATTTACTTGTCAGTGTATCTTTGAGCTTCCAAGGACGCAGATACTTCAAAGTTTGTGTTTTTATAGATACAAACATCTTATCTGAAACATCTTATCTAGTTGTGAGTTGCGAGTTGCGAGTTGCTACGTGGCACCACTTTAACTGCTTAACCATAAGAATCTATCGCATGTGCATTCTTTAGCTAATTTTTTTCTGTATTTATATTGTTATATGCTTAGTGTTATATTTTCTCTGTGGTGCATAAATTTGCAGGATGATGGAATCTGGTTTGCTTCCATTGAAGGATGCGACGCAGGTGTATGAGAAGAAAATGAAGAAGAGTAAGAACCAAAGAGTTACTTCCCCATTAAAACATGTGAAGACAGTTAAGGAGACCAAATCCGTGACTGTTAAAAAGAAAGTAGTTTCTTCCACCCCAAAGTCCTCAGACAAAAAGAAGAAAATAGAAACCACTACTGCGACGAAACAATCAAAGAAGCGCAAGGCTGTAAGCTCTGAAGAAGATGCAACCTCTGAGGAAGATTCGGAAGATGATTTTGTTCTGTCAACTAGGAAGAAGGTAAAGAGAGCCAGAGTCAATTAACTTAATGATATCAGTAAAAAGTAAAGGATTCATGATGATTTTTAGAGATGAAAAGTTTGATAGGTAACCTGATTTGTATTGACATATGAGCAAATCTTTTAGATTTATCAGTGAAAAAAACGGTGTAAGAAATTCTGGTGTTCCGTTGTTTGTCTCGTAACTTAATCCACGCGATGCATGGACAATGTGGCATACTTTTTGGGGCTAATGTGCAG

mRNA sequence

ATTACCCAACCTAAAAGCTCAAAAGTAGCGGAGTAACATTTTTGGAACCTCTAATTCCTAGTATCGATTCAAAAATTTCACCATTAACAAGCAAAAGTACTACACAAAACCCTTGTTTGTTCACCATTCCAAACATTTTCCATTTCCTTTCTCCTCTAATTGGGCGGTGTGGAAATGCCTTCAGAAGACGCAAAACCATTGAAGAAAGAGGAGCTTGAAGACGACGAAGACGATGACGAGGTGCCTATTTCTGTAACCCGCAACAAAAACAAGAAACCCAGTAATTCTCCTGCAACTGCGACGCCCAAGCCGAAACCCAAAGTGACTAAAAAAGAAGAAGATTCAAGCGACGACGATGTCCCTCTGAAGAAACCAACTCCTAAATCAACCAAACCCAAAAAGGAAGAAGTTGATACTAAGAAAATTGTTGCCAAAGATGACAAGAAAAAAATCAAGAAGAAAAAGGAGGAGGAAACGGTGAAGATTGAGGTGAAGAAGAGGGAGAGAAAGGTGTATAGTTTACCTGGGCAAAAACGCGATCCTCCTGAAGAAAGAGATCCTTTGAGGATTTTCTATGAGACATTGTATCAGCAAGTGCCCACCAGTGAACTGGCTGCAATTTGGATGATGGAATCTGGTTTGCTTCCATTGAAGGATGCGACGCAGGTGTATGAGAAGAAAATGAAGAAGAGTAAGAACCAAAGAGTTACTTCCCCATTAAAACATGTGAAGACAGTTAAGGAGACCAAATCCGTGACTGTTAAAAAGAAAGTAGTTTCTTCCACCCCAAAGTCCTCAGACAAAAAGAAGAAAATAGAAACCACTACTGCGACGAAACAATCAAAGAAGCGCAAGGCTGTAAGCTCTGAAGAAGATGCAACCTCTGAGGAAGATTCGGAAGATGATTTTGTTCTGTCAACTAGGAAGAAGGTAAAGAGAGCCAGAGTCAATTAACTTAATGATATCAGTAAAAAGTAAAGGATTCATGATGATTTTTAGAGATGAAAAGTTTGATAGGTAACCTGATTTGTATTGACATATGAGCAAATCTTTTAGATTTATCAGTGAAAAAAACGGTGTAAGAAATTCTGGTGTTCCGTTGTTTGTCTCGTAACTTAATCCACGCGATGCATGGACAATGTGGCATACTTTTTGGGGCTAATGTGCAG

Coding sequence (CDS)

ATGCCTTCAGAAGACGCAAAACCATTGAAGAAAGAGGAGCTTGAAGACGACGAAGACGATGACGAGGTGCCTATTTCTGTAACCCGCAACAAAAACAAGAAACCCAGTAATTCTCCTGCAACTGCGACGCCCAAGCCGAAACCCAAAGTGACTAAAAAAGAAGAAGATTCAAGCGACGACGATGTCCCTCTGAAGAAACCAACTCCTAAATCAACCAAACCCAAAAAGGAAGAAGTTGATACTAAGAAAATTGTTGCCAAAGATGACAAGAAAAAAATCAAGAAGAAAAAGGAGGAGGAAACGGTGAAGATTGAGGTGAAGAAGAGGGAGAGAAAGGTGTATAGTTTACCTGGGCAAAAACGCGATCCTCCTGAAGAAAGAGATCCTTTGAGGATTTTCTATGAGACATTGTATCAGCAAGTGCCCACCAGTGAACTGGCTGCAATTTGGATGATGGAATCTGGTTTGCTTCCATTGAAGGATGCGACGCAGGTGTATGAGAAGAAAATGAAGAAGAGTAAGAACCAAAGAGTTACTTCCCCATTAAAACATGTGAAGACAGTTAAGGAGACCAAATCCGTGACTGTTAAAAAGAAAGTAGTTTCTTCCACCCCAAAGTCCTCAGACAAAAAGAAGAAAATAGAAACCACTACTGCGACGAAACAATCAAAGAAGCGCAAGGCTGTAAGCTCTGAAGAAGATGCAACCTCTGAGGAAGATTCGGAAGATGATTTTGTTCTGTCAACTAGGAAGAAGGTAAAGAGAGCCAGAGTCAATTAA

Protein sequence

MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDDDVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTSPLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEEDSEDDFVLSTRKKVKRARVN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26381.1Spo26381.1mRNA


Homology
[Close]
BLAST of Spo26381.1 vs. NCBI nr
Match: gi|902166411|gb|KNA07222.1| (hypothetical protein SOVF_173870 [Spinacia oleracea])

HSP 1 Score: 450.7 bits (1158), Expect = 1.800e-123
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD
Sbjct: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60

Query: 61  DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK 120
           DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK
Sbjct: 61  DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK 120

Query: 121 RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS 180
           RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS
Sbjct: 121 RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS 180

Query: 181 PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED 240
           PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED
Sbjct: 181 PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED 240

Query: 241 SEDDFVLSTRKKVKRARVN 260
           SEDDFVLSTRKKVKRARVN
Sbjct: 241 SEDDFVLSTRKKVKRARVN 259
[Close]
BLAST of Spo26381.1 vs. NCBI nr
Match: gi|731360522|ref|XP_010691867.1| (PREDICTED: neurofilament heavy polypeptide isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 288.5 bits (737), Expect = 1.200e-74
Identity = 186/264 (70.45%), Postives = 214/264 (81.06%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNK--NKKPSNSPATATPKPKPKVTKKEEDSS 60
           MPSEDAKP+KKEE+EDD DDDE PIS  RN    KKP+ SP++ATPK K KV  K+E+SS
Sbjct: 1   MPSEDAKPVKKEEIEDD-DDDEKPISQVRNNINKKKPAISPSSATPKQKSKV--KKEESS 60

Query: 61  DDDVPLKKPT---PKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYS 120
           DDD   KKPT   PK TKPKKE          D+K+KIKK K+EE VK+E KKRE+K+Y 
Sbjct: 61  DDDFSSKKPTKSTPKPTKPKKE----------DNKQKIKKIKKEEKVKVEAKKREKKMYD 120

Query: 121 LPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKN 180
            PGQKRDPPE+RDPLRIFYETLYQQ PTSELAA+WMMESGLLPLK+A QVYE KMKK KN
Sbjct: 121 FPGQKRDPPEQRDPLRIFYETLYQQKPTSELAAVWMMESGLLPLKEAKQVYENKMKK-KN 180

Query: 181 QRVTSPLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDA 240
           Q++TSP+KHVKTVKETKSVTVKKKVV+STPKSS   KK ET+T  KQS+KRKA SSEE++
Sbjct: 181 QKITSPVKHVKTVKETKSVTVKKKVVASTPKSS-STKKTETSTVKKQSRKRKAESSEENS 240

Query: 241 TSEEDSEDDFVLSTRKKVKRARVN 260
           +SEEDSE+D+ LS RK  K+ARVN
Sbjct: 241 SSEEDSEEDYALSNRKVAKKARVN 249
[Close]
BLAST of Spo26381.1 vs. NCBI nr
Match: gi|698521955|ref|XP_009757789.1| (PREDICTED: uncharacterized protein DDB_G0283697 [Nicotiana sylvestris])

HSP 1 Score: 187.2 bits (474), Expect = 3.600e-44
Identity = 142/268 (52.99%), Postives = 183/268 (68.28%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           MPSED+KP+KKEE +D+E      I    N  KKP+N+ A+ +  PK    KKEE   D 
Sbjct: 1   MPSEDSKPVKKEEFDDEES-----IGSLLNNKKKPNNNAASKSQPPKSSKVKKEEKDDDF 60

Query: 61  DVPLKKPTPKSTKPKKEEVDT---KKIVAKDDKKKIKKKKEEETVK------IEVKKRER 120
           + P+ K TPK+ KPKKEE  +   KK  +K DKK +KK++ E+  K        VKKRE+
Sbjct: 61  EEPISKKTPKNLKPKKEEESSSMSKKSSSKTDKKVVKKEEVEDKKKGTKNADSNVKKREK 120

Query: 121 KVYSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMK 180
           KVY LPGQKRDPPEERDP+RIFYE+LYQQVP SELAAIWMMESGLLP   A +V EKK K
Sbjct: 121 KVYDLPGQKRDPPEERDPIRIFYESLYQQVPNSELAAIWMMESGLLPKDLAKKVLEKKQK 180

Query: 181 KSKNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIETTTATK-QSKKRKAV 240
           K++ Q++ S +K V TVK+ T+S+TV KK  SSTP S+  KK  ++   +K QSKKRK  
Sbjct: 181 KAQQQKLGSSMKTVVTVKKNTESITVTKK-TSSTPLSTQTKKTPDSGAKSKQQSKKRK-- 240

Query: 241 SSEEDATSEEDSEDDFVLSTRKKVKRAR 258
             ++D++ +EDS+DDFV S+ K  K+ R
Sbjct: 241 --KDDSSEDEDSDDDFV-SSLKSAKKQR 257
[Close]
BLAST of Spo26381.1 vs. NCBI nr
Match: gi|697129631|ref|XP_009618876.1| (PREDICTED: uncharacterized protein DDB_G0283697 [Nicotiana tomentosiformis])

HSP 1 Score: 181.4 bits (459), Expect = 2.000e-42
Identity = 138/269 (51.30%), Postives = 178/269 (66.17%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           MPSED+KP+KKEE +D+E      I    N  KKP+N+ A+ +  PK    KKEE   D 
Sbjct: 1   MPSEDSKPVKKEEFDDEES-----IGSLLNNKKKPNNNAASKSQPPKNAKVKKEEKDDDF 60

Query: 61  DVPLKKPTPKSTKPKKEEVDT---KKIVAKDDKKKIKKKKEEETVK------IEVKKRER 120
           + P+ K TPK+ K KKEE  +   KK  +K DKK +KK++ E+  K        VKKRE+
Sbjct: 61  EEPISKKTPKNLKLKKEEESSSMSKKNSSKTDKKVVKKEELEDKKKGTKNADSNVKKREK 120

Query: 121 KVYSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMK 180
           KVY LPGQKRDPPEERDPLRIFYE+LYQQVP SELAAIWMMESGLLP   A +V EKK K
Sbjct: 121 KVYDLPGQKRDPPEERDPLRIFYESLYQQVPNSELAAIWMMESGLLPKDLAKKVLEKKQK 180

Query: 181 KSKNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVS 240
           K + Q++ SP+K V TVK+ T+S+TV KK  S+   +  KK       + +QSKKRK   
Sbjct: 181 KVQQQKLGSPMKTVVTVKKNTESITVTKKTSSTFLSTQTKKTPDSGAKSKQQSKKRK--- 240

Query: 241 SEEDATSEEDSEDDFVLSTRKKVKRARVN 260
            ++D++ +EDS+DDFV S+ K  K+ R +
Sbjct: 241 -KDDSSEDEDSDDDFV-SSLKSAKKQRAS 259
[Close]
BLAST of Spo26381.1 vs. NCBI nr
Match: gi|565350185|ref|XP_006342054.1| (PREDICTED: neurofilament heavy polypeptide [Solanum tuberosum])

HSP 1 Score: 178.3 bits (451), Expect = 1.700e-41
Identity = 139/268 (51.87%), Postives = 180/268 (67.16%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           M SED+KP++K E +D E      I    N  KKP+N+  + +  PK    KKEE   D 
Sbjct: 1   MLSEDSKPVRKVESDDGES-----IGSLLNSKKKPNNNGGSKSQPPKNAKMKKEEKDDDF 60

Query: 61  DVPLKKPTPKSTKPKKEEVD--TKKIVAKDDKKKIKKKKEEETVKIE-----VKKRERKV 120
           + P+ K +PK+ KPKKEE    +KK  +K DKK +KK++E++    +     VKKRE+KV
Sbjct: 61  EEPISKKSPKNVKPKKEEPSPMSKKSSSKTDKKVVKKEEEDKKKGTKNGVTIVKKREKKV 120

Query: 121 YSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKS 180
           Y LPGQKRD PEERDPLRIFYE+LYQQVP SELAAIWMMESGLLP   A +V+EKK KK+
Sbjct: 121 YDLPGQKRDAPEERDPLRIFYESLYQQVPESELAAIWMMESGLLPKDLAKKVFEKKQKKA 180

Query: 181 KNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIETTTATK-QSKKRKAVSS 240
           +  ++ SP+K V TVK+ T+SVT+KK   SST  S+ KKK  ++   +K QSKKRK    
Sbjct: 181 QQLKLGSPMKTVVTVKKTTESVTIKKTTSSSTSLSTQKKKTPDSGAKSKQQSKKRKL--- 240

Query: 241 EEDATSEEDSEDDFVLSTRKKVKRARVN 260
            +D +SEEDS+DDFV +T K  KR R +
Sbjct: 241 -KDDSSEEDSDDDFV-ATLKSTKRQRAS 258
[Close]
BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ01_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173870 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.200e-123
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD
Sbjct: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60

Query: 61  DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK 120
           DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK
Sbjct: 61  DVPLKKPTPKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYSLPGQK 120

Query: 121 RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS 180
           RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS
Sbjct: 121 RDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTS 180

Query: 181 PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED 240
           PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED
Sbjct: 181 PLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDATSEED 240

Query: 241 SEDDFVLSTRKKVKRARVN 260
           SEDDFVLSTRKKVKRARVN
Sbjct: 241 SEDDFVLSTRKKVKRARVN 259
[Close]
BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFW4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016310 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.100e-75
Identity = 186/264 (70.45%), Postives = 214/264 (81.06%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNK--NKKPSNSPATATPKPKPKVTKKEEDSS 60
           MPSEDAKP+KKEE+EDD DDDE PIS  RN    KKP+ SP++ATPK K KV  K+E+SS
Sbjct: 1   MPSEDAKPVKKEEIEDD-DDDEKPISQVRNNINKKKPAISPSSATPKQKSKV--KKEESS 60

Query: 61  DDDVPLKKPT---PKSTKPKKEEVDTKKIVAKDDKKKIKKKKEEETVKIEVKKRERKVYS 120
           DDD   KKPT   PK TKPKKE          D+K+KIKK K+EE VK+E KKRE+K+Y 
Sbjct: 61  DDDFSSKKPTKSTPKPTKPKKE----------DNKQKIKKIKKEEKVKVEAKKREKKMYD 120

Query: 121 LPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKN 180
            PGQKRDPPE+RDPLRIFYETLYQQ PTSELAA+WMMESGLLPLK+A QVYE KMKK KN
Sbjct: 121 FPGQKRDPPEQRDPLRIFYETLYQQKPTSELAAVWMMESGLLPLKEAKQVYENKMKK-KN 180

Query: 181 QRVTSPLKHVKTVKETKSVTVKKKVVSSTPKSSDKKKKIETTTATKQSKKRKAVSSEEDA 240
           Q++TSP+KHVKTVKETKSVTVKKKVV+STPKSS   KK ET+T  KQS+KRKA SSEE++
Sbjct: 181 QKITSPVKHVKTVKETKSVTVKKKVVASTPKSS-STKKTETSTVKKQSRKRKAESSEENS 240

Query: 241 TSEEDSEDDFVLSTRKKVKRARVN 260
           +SEEDSE+D+ LS RK  K+ARVN
Sbjct: 241 SSEEDSEEDYALSNRKVAKKARVN 249
[Close]
BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Match: M1ALK5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009865 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.200e-41
Identity = 139/268 (51.87%), Postives = 180/268 (67.16%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           M SED+KP++K E +D E      I    N  KKP+N+  + +  PK    KKEE   D 
Sbjct: 1   MLSEDSKPVRKVESDDGES-----IGSLLNSKKKPNNNGGSKSQPPKNAKMKKEEKDDDF 60

Query: 61  DVPLKKPTPKSTKPKKEEVD--TKKIVAKDDKKKIKKKKEEETVKIE-----VKKRERKV 120
           + P+ K +PK+ KPKKEE    +KK  +K DKK +KK++E++    +     VKKRE+KV
Sbjct: 61  EEPISKKSPKNVKPKKEEPSPMSKKSSSKTDKKVVKKEEEDKKKGTKNGVTIVKKREKKV 120

Query: 121 YSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKS 180
           Y LPGQKRD PEERDPLRIFYE+LYQQVP SELAAIWMMESGLLP   A +V+EKK KK+
Sbjct: 121 YDLPGQKRDAPEERDPLRIFYESLYQQVPESELAAIWMMESGLLPKDLAKKVFEKKQKKA 180

Query: 181 KNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIETTTATK-QSKKRKAVSS 240
           +  ++ SP+K V TVK+ T+SVT+KK   SST  S+ KKK  ++   +K QSKKRK    
Sbjct: 181 QQLKLGSPMKTVVTVKKTTESVTIKKTTSSSTSLSTQKKKTPDSGAKSKQQSKKRKL--- 240

Query: 241 EEDATSEEDSEDDFVLSTRKKVKRARVN 260
            +D +SEEDS+DDFV +T K  KR R +
Sbjct: 241 -KDDSSEEDSDDDFV-ATLKSTKRQRAS 258
[Close]
BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Match: K4BVM6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.500e-39
Identity = 134/269 (49.81%), Postives = 179/269 (66.54%), Query Frame = 1 

		  

Query: 1   MPSEDAKPLKKEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 60
           M SED+KP++K E +D E      I    N  KKP+N+ A+ +   K    KKEE   D 
Sbjct: 1   MSSEDSKPVRKVESDDGES-----IGSLFNSKKKPNNNAASKSQPLKKAKIKKEEKDDDF 60

Query: 61  DVPLKKPTPKSTKPKKEEVD--TKKIVAKDDKKKIKKKKEEETVKIE-----VKKRERKV 120
           + P+ K +PK  KPKKEE    +KK  ++ DKK +KK++E++    +     VKK+E+KV
Sbjct: 61  EEPISKKSPKIVKPKKEEPSPVSKKSSSRTDKKVVKKEEEDKKKGTKNGDTVVKKKEKKV 120

Query: 121 YSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQVYEKKMKKS 180
           Y LPGQKRD PEERDPLRIFYE+LYQQVP SELAAIWMMESGLLP   A +V+EKK KK+
Sbjct: 121 YDLPGQKRDAPEERDPLRIFYESLYQQVPESELAAIWMMESGLLPKDLAKKVFEKKQKKA 180

Query: 181 KNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIET--TTATKQSKKRKAVS 240
           +  ++ SPLK V TVK+ T+SVT+KK   SST  S+ KKK  ++  T + ++SKKRK   
Sbjct: 181 QQLKLGSPLKTVVTVKKTTESVTIKKTTSSSTTPSTQKKKTPDSGKTESMQRSKKRKL-- 240

Query: 241 SEEDATSEEDSEDDFVLSTRKKVKRARVN 260
             +D +SEEDS+D F+ +T K  KR + +
Sbjct: 241 --KDDSSEEDSDDGFI-ATLKSTKRQKAS 259
[Close]
BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HJB8_SOLCH (Putative nucleolar protein 58-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.700e-37
Identity = 121/217 (55.76%), Postives = 154/217 (70.97%), Query Frame = 1 

		  

Query: 52  KKEEDSSDDDVPLKKPTPKSTKPKKEEVD--TKKIVAKDDKKKIKKKKEEETVKIE---- 111
           KKEE   D + P+ K +PK+ KPKKEE    +KK  +K DKK +KK++E++    +    
Sbjct: 2   KKEEKDDDFEEPISKKSPKNVKPKKEEPSPMSKKSSSKTDKKVVKKEEEDKKKGTKNGDT 61

Query: 112 -VKKRERKVYSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQ 171
            VKKRE+KVY LPGQKRD PEERDPLRIFYE+LYQQVP SELAAIWMMESGLLP   A +
Sbjct: 62  IVKKREKKVYDLPGQKRDAPEERDPLRIFYESLYQQVPESELAAIWMMESGLLPKDLAKK 121

Query: 172 VYEKKMKKSKNQRVTSPLKHVKTVKE-TKSVTVKKKVVSSTPKSSDKKKKIETTTATK-Q 231
           V+EKK KK++  ++ SP+K V TVK+ T+SVT+KK   SST  S+ KKK  ++   +K Q
Sbjct: 122 VFEKKQKKAQQLKLGSPMKTVVTVKKTTESVTIKKTTSSSTSLSTQKKKTPDSGAKSKQQ 181

Query: 232 SKKRKAVSSEEDATSEEDSEDDFVLSTRKKVKRARVN 260
           SKKRK     +D +SEEDS+DDFV +T K  KR R +
Sbjct: 182 SKKRKL----KDDSSEEDSDDDFV-ATLKSTKRQRAS 213
[Close]
BLAST of Spo26381.1 vs. TAIR (Arabidopsis)
Match: AT1G19990.1 (unknown protein)

HSP 1 Score: 121.7 bits (304), Expect = 6.600e-28
Identity = 117/277 (42.24%), Postives = 162/277 (58.48%), Query Frame = 1 

		  

Query: 2   PSEDAKPLK-KEELEDDEDDDEVPISVTRNKNKKPSNSPATATPKPKPKVTKKEEDSSDD 61
           PSED K +K KEE E+D        S++    KKP+N     + K K +   + +D  DD
Sbjct: 3   PSEDVKAMKMKEEAEEDNK------SLSSFAKKKPTNGNNAGSKKLKKE---ENDDDDDD 62

Query: 62  DVPLKKPTPKS-TKP--KKEEVDTKKIVAKDDKKKI-------------KKKKEEETVKI 121
           + P+K     S  KP  KKEE+D       D+KK +             KK ++EE VK 
Sbjct: 63  NKPIKSSVSGSRAKPVKKKEEIDK-----DDEKKPVSKRNSSVGVSKENKKPEKEEEVK- 122

Query: 122 EVKKRERKVYSLPGQKRDPPEERDPLRIFYETLYQQVPTSELAAIWMMESGLLPLKDATQ 181
             KKRERKVY LPGQKR+ P+ERDPLRIFYE+LY+Q+PTS++A IW+MESGLLP + A +
Sbjct: 123 --KKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAEKAKK 182

Query: 182 VYEKKMKKSKNQRVTSPLKHVKTV--KETKSVTVKKKVVSSTPKS--SDKKKKIETTTAT 241
           V EKK++  K  +++SP+K   +     +KSVTVKKK V  +P    S+KKK  ++   T
Sbjct: 183 VLEKKLQ--KGGKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALSNKKKGNDSKPTT 242

Query: 242 KQSKKRKAVSSEEDATSEEDSEDDFVLSTRKKVKRAR 258
           K+ KK          + ++DS+DDF+ S   K  RA+
Sbjct: 243 KKRKKN---------SDDDDSDDDFLASRVSKKARAK 251
[Close]
BLAST of Spo26381.1 vs. TAIR (Arabidopsis)
Match: AT5G11600.1 (unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.300e-12
Identity = 81/236 (34.32%), Postives = 119/236 (50.42%), Query Frame = 1 

		  

Query: 26  SVTRNKNKKPSNSPATATPKPKPKV-TKKEEDSSDDDVPLKK-PTPKSTKPKKEEVDTKK 85
           S+   K    S+ P  +  KP+  V T   +  +   VP+    T  +T      V  K 
Sbjct: 30  SIKDKKKIATSSRPIMSDSKPRSSVSTVTAKSEAKPKVPINSVKTIATTSAAASLVKGKA 89

Query: 86  IVAKDDKKKIKKKKEEETVKIEVK---KRERKVYSLPGQKRDPPEERDPLRIFYETLYQQ 145
                    +K K    TV + VK   KRE+KVYSL GQK DPPEER+PLRIFYE+L +Q
Sbjct: 90  QTTSTVVSLVKAKTTSATVSL-VKGKAKREKKVYSLAGQKFDPPEEREPLRIFYESLSKQ 149

Query: 146 VPTSELAAIWMMESGLLPLKDATQVYEKKMKKSKNQRVTSPLKHVKTVKETKSVTVKKKV 205
           +P SE+A  W+ME G+L  + A + +EKK +K K  R+ +P K                 
Sbjct: 150 IPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSK----------------- 209

Query: 206 VSSTPKSSDKKKKIETTTATK----QSKKRKAVSSEEDATSEEDSEDDFVLSTRKK 253
             S P  S K +  + T+A+K     ++K+K V  ++D     D +DDF+LS +++
Sbjct: 210 --SAPTFSSKAESSQRTSASKNNGLDARKKKKVVDDDD-----DDDDDFILSHKRR 240
The following BLAST results are available for this feature:
BLAST of Spo26381.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902166411|gb|KNA07222.1|1.8e-123100.hypothetical protein SOVF_1738... [more]
gi|731360522|ref|XP_010691867.1|1.2e-7470.4PREDICTED: neurofilament heavy... [more]
gi|698521955|ref|XP_009757789.1|3.6e-4452.9PREDICTED: uncharacterized pro... [more]
gi|697129631|ref|XP_009618876.1|2.0e-4251.3PREDICTED: uncharacterized pro... [more]
gi|565350185|ref|XP_006342054.1|1.7e-4151.8PREDICTED: neurofilament heavy... [more]
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BLAST of Spo26381.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QJ01_SPIOL1.2e-123100.Uncharacterized protein OS=Spi... [more]
A0A0J8BFW4_BETVU8.1e-7570.4Uncharacterized protein OS=Bet... [more]
M1ALK5_SOLTU1.2e-4151.8Uncharacterized protein OS=Sol... [more]
K4BVM6_SOLLC5.5e-3949.8Uncharacterized protein OS=Sol... [more]
A0A0V0HJB8_SOLCH6.7e-3755.7Putative nucleolar protein 58-... [more]
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BLAST of Spo26381.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26381.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G19990.16.6e-2842.2unknown protein[more]
AT5G11600.11.3e-1234.3unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor
NoneNo IPR availablePANTHERPTHR33828FAMILY NOT NAMEDcoord: 10..258
score: 2.0
NoneNo IPR availablePANTHERPTHR33828:SF2SUBFAMILY NOT NAMEDcoord: 10..258
score: 2.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006310 DNA recombination
biological_process GO:0051103 DNA ligation involved in DNA repair
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0065003 protein-containing complex assembly
biological_process GO:0007076 mitotic chromosome condensation
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0006996 organelle organization
biological_process GO:0034654 nucleobase-containing compound biosynthetic process
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0006260 DNA replication
biological_process GO:0006281 DNA repair
biological_process GO:0008152 metabolic process
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0051013 microtubule severing
biological_process GO:0001510 RNA methylation
biological_process GO:0006364 rRNA processing
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005663 DNA replication factor C complex
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0005732 small nucleolar ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005874 microtubule
cellular_component GO:0005829 cytosol
cellular_component GO:0008352 katanin complex
cellular_component GO:0031981 nuclear lumen
cellular_component GO:0034457 Mpp10 complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0005488 binding
molecular_function GO:0003689 DNA clamp loader activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003910 DNA ligase (ATP) activity
molecular_function GO:0005524 ATP binding
RNA-Seq Expression