Spo26416 (gene) | SpinachBase

Overview


Name	Spo26416
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Myb domain protein 107
Location	SpoScf_01155 : 65858 .. 66573 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGGAGATCACCGTGTTGCGATGAAAGTGGGCTAAATAAAGGGCCATGGACACCGGAGGAGGACAAGAAGCTAGTGGATTACATTGACAGACACGGCCATGGAAGTTGGCGAGCTCTACCAAAACTGGCTGGCTTGAACTGCTGTTGAAAGAGCTGCAGGCTTCGCTGGACCAACTACCTTCGTCCTGATATCAAATGCGGAAAGTTCTCTGAGGATGAAGAGCAAACCATCATCAACCTTCGCTATGTGCTTGGCAACAAGTATGTCCATGTCCATCAGACAATTTTACTAACAGCAAATTTACTGCATTGTATGCGTCTAATATCTTCTTATGCATTTGTATTATTGTCTGGTTGATTGAAGGTGGTCGGTCTGCAATAGCAAGCCATCTTTCAGGGAGCACGAACAACGAGATTAAAAACTTCTGGAACACCCACCTGAAAAAAAAGCTTCTGCAGATAGGTATCGACCATGTGACTCACAGGCCGAGGACAGACCTCAACCTGCTAGCTAACCTCCCTCAGTTGCTCATGGCTGTCAACCTCAGAAATAGTCTCATGATGAACAACAGTACTGGCAATGGGATTCCTACTTTGGAGGATACACTCAGGTTGTTGGAATCTGATGCCACCCAACTCGCGAAATTCCACATATTCAACAAGTTGCAGGTGAAGCCCAAGCAGCAGCTATCTACCTACTGGGGCCTCTAA

mRNA sequence

ATGATGGGGAGATCACCGTGTTGCGATGAAAGTGGGCTAAATAAAGGGCCATGGACACCGGAGGAGGACAAGAAGCTAGTGGATTACATTGACAGACACGGCCATGGAAGCTTCGCTGGACCAACTACCTTCGTCCTGATATCAAATGCGGAAAGTTCTCTGAGGATGAAGAGCAAACCATCATCAACCTTCGCTATGTGCTTGGCAACAAGTGGTCGGTCTGCAATAGCAAGCCATCTTTCAGGGAGCACGAACAACGAGATTAAAAACTTCTGGAACACCCACCTGAAAAAAAAGCTTCTGCAGATAGGTATCGACCATGTGACTCACAGGCCGAGGACAGACCTCAACCTGCTAGCTAACCTCCCTCAGTTGCTCATGGCTGTCAACCTCAGAAATAGTCTCATGATGAACAACAGTACTGGCAATGGGATTCCTACTTTGGAGGATACACTCAGGTTGTTGGAATCTGATGCCACCCAACTCGCGAAATTCCACATATTCAACAAGTTGCAGGTGAAGCCCAAGCAGCAGCTATCTACCTACTGGGGCCTCTAA

Coding sequence (CDS)

ATGATGGGGAGATCACCGTGTTGCGATGAAAGTGGGCTAAATAAAGGGCCATGGACACCGGAGGAGGACAAGAAGCTAGTGGATTACATTGACAGACACGGCCATGGAAGCTTCGCTGGACCAACTACCTTCGTCCTGATATCAAATGCGGAAAGTTCTCTGAGGATGAAGAGCAAACCATCATCAACCTTCGCTATGTGCTTGGCAACAAGTGGTCGGTCTGCAATAGCAAGCCATCTTTCAGGGAGCACGAACAACGAGATTAAAAACTTCTGGAACACCCACCTGAAAAAAAAGCTTCTGCAGATAGGTATCGACCATGTGACTCACAGGCCGAGGACAGACCTCAACCTGCTAGCTAACCTCCCTCAGTTGCTCATGGCTGTCAACCTCAGAAATAGTCTCATGATGAACAACAGTACTGGCAATGGGATTCCTACTTTGGAGGATACACTCAGGTTGTTGGAATCTGATGCCACCCAACTCGCGAAATTCCACATATTCAACAAGTTGCAGGTGAAGCCCAAGCAGCAGCTATCTACCTACTGGGGCCTCTAA

Protein sequence

MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKPKQQLSTYWGL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26416.1	Spo26416.1	mRNA

Homology

[Close]

BLAST of Spo26416.1 vs. NCBI nr
Match: gi|902219716|gb|KNA18385.1| (hypothetical protein SOVF_071230 [Spinacia oleracea])

HSP 1 Score: 257.7 bits (657), Expect = 1.600e-65
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

		  
Query: 56  MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD 115
           MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD
Sbjct: 1   MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD 60

Query: 116 LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP 175
           LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP
Sbjct: 61  LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP 120

Query: 176 KQQLSTYWGL 186
           KQQLSTYWGL
Sbjct: 121 KQQLSTYWGL 130

[Close]

BLAST of Spo26416.1 vs. NCBI nr
Match: gi|902226784|gb|KNA20480.1| (hypothetical protein SOVF_052010 [Spinacia oleracea])

HSP 1 Score: 245.0 bits (624), Expect = 1.000e-61
Identity = 129/188 (68.62%), Postives = 138/188 (73.40%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDESGL KGPWTPEEDKKLVDYIDRHGHGS+        ++    S R++   
Sbjct: 1   MMGRSPCCDESGLKKGPWTPEEDKKLVDYIDRHGHGSWRALPKLAGLNRCGKSCRLRWTN 60

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                            T     +  G   SAIASHL G T+NEIKNFWNTHLKKKLLQ+
Sbjct: 61  YLRPDIKRGKFSEDEEQTIINLHSVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLLQM 120

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 172
           GID VTHRPRTDLNLLANLPQLLMA NL NSLMMNNSTGNGIPTLEDTLRLLESDATQLA
Sbjct: 121 GIDPVTHRPRTDLNLLANLPQLLMAANLSNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 180

[Close]

BLAST of Spo26416.1 vs. NCBI nr
Match: gi|731320966|ref|XP_010671094.1| (PREDICTED: transcription factor MYB39 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 204.9 bits (520), Expect = 1.200e-49
Identity = 114/189 (60.32%), Postives = 129/189 (68.25%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDESGL KGPWTPEEDK+L DYI RHGHGS+        ++    S R++   
Sbjct: 1   MMGRSPCCDESGLKKGPWTPEEDKQLTDYIQRHGHGSWRALPKLAGLNRCGKSCRLRWTN 60

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                        +   T     +  G   SAIASHL G T+NEIKN WNTHLKKKLLQ+
Sbjct: 61  YLRPDIKRGKFTDEEQQTIINLHSVLGNKWSAIASHLPGRTDNEIKNLWNTHLKKKLLQM 120

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGN-GIPTLEDTLRLLESDATQL 172
           GID VTHRPRTDLNLLANLPQLLMA N+ +SLMMN  +GN G  TLEDTLRL+ESDA QL
Sbjct: 121 GIDPVTHRPRTDLNLLANLPQLLMAANISSSLMMN--SGNIGNHTLEDTLRLIESDAAQL 180

[Close]

BLAST of Spo26416.1 vs. NCBI nr
Match: gi|590639216|ref|XP_007029608.1| (Myb domain protein 107 [Theobroma cacao])

HSP 1 Score: 171.4 bits (433), Expect = 1.500e-39
Identity = 104/191 (54.45%), Postives = 121/191 (63.35%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDE+GL KGPWTPEED  LVDYI +HGHGS+        ++    S R++   
Sbjct: 20  MMGRSPCCDENGLKKGPWTPEEDSILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTN 79

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                        +   T     A  G   SAIA+HL G T+NEIKNFWNTHLKKKLLQ+
Sbjct: 80  YLRPDIKRGKFSEEEEQTIINLHAVLGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLLQM 139

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 174
           GID VTHRPRTDLN+LANLPQLL A N   S +MN      IP L++ LR L+SDA QLA
Sbjct: 140 GIDPVTHRPRTDLNILANLPQLLAAANF--SSLMN------IP-LDNALR-LQSDAAQLA 199

[Close]

BLAST of Spo26416.1 vs. NCBI nr
Match: gi|297737290|emb|CBI26491.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 164.5 bits (415), Expect = 1.800e-37
Identity = 97/191 (50.79%), Postives = 118/191 (61.78%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           M RSP  +ESGL KGPWTPEED+KLV+YI RHGHGS+        ++    S R++    
Sbjct: 1   MARSP--EESGLKKGPWTPEEDQKLVEYIQRHGHGSWRALPKLAGLNRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                       +  +T     +  G   SAIA+HL G T+NEIKNFWNTHLKKKL+Q+G
Sbjct: 61  LRPDIKRGKFSDEEENTIINLHSVLGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLMQMG 120

Query: 122 IDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAK 176
           ID VTHRPRTDLN+LANLPQLL A NL  SL +NN   N +         L+SDATQLAK
Sbjct: 121 IDPVTHRPRTDLNILANLPQLLAAANLSTSL-VNNPWDNAL--------RLQSDATQLAK 180

[Close]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFX9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071230 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.100e-65
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

		  
Query: 56  MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD 115
           MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD
Sbjct: 1   MKSKPSSTFAMCLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIGIDHVTHRPRTD 60

Query: 116 LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP 175
           LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP
Sbjct: 61  LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAKFHIFNKLQVKP 120

Query: 176 KQQLSTYWGL 186
           KQQLSTYWGL
Sbjct: 121 KQQLSTYWGL 130

[Close]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLU6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052010 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.300e-62
Identity = 129/188 (68.62%), Postives = 138/188 (73.40%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDESGL KGPWTPEEDKKLVDYIDRHGHGS+        ++    S R++   
Sbjct: 1   MMGRSPCCDESGLKKGPWTPEEDKKLVDYIDRHGHGSWRALPKLAGLNRCGKSCRLRWTN 60

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                            T     +  G   SAIASHL G T+NEIKNFWNTHLKKKLLQ+
Sbjct: 61  YLRPDIKRGKFSEDEEQTIINLHSVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLLQM 120

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 172
           GID VTHRPRTDLNLLANLPQLLMA NL NSLMMNNSTGNGIPTLEDTLRLLESDATQLA
Sbjct: 121 GIDPVTHRPRTDLNLLANLPQLLMAANLSNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 180

[Close]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSV0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049670 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.400e-50
Identity = 114/189 (60.32%), Postives = 129/189 (68.25%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDESGL KGPWTPEEDK+L DYI RHGHGS+        ++    S R++   
Sbjct: 1   MMGRSPCCDESGLKKGPWTPEEDKQLTDYIQRHGHGSWRALPKLAGLNRCGKSCRLRWTN 60

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                        +   T     +  G   SAIASHL G T+NEIKN WNTHLKKKLLQ+
Sbjct: 61  YLRPDIKRGKFTDEEQQTIINLHSVLGNKWSAIASHLPGRTDNEIKNLWNTHLKKKLLQM 120

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGN-GIPTLEDTLRLLESDATQL 172
           GID VTHRPRTDLNLLANLPQLLMA N+ +SLMMN  +GN G  TLEDTLRL+ESDA QL
Sbjct: 121 GIDPVTHRPRTDLNLLANLPQLLMAANISSSLMMN--SGNIGNHTLEDTLRLIESDAAQL 180

[Close]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Match: A0A061EYD8_THECC (Myb domain protein 107 OS=Theobroma cacao GN=TCM_025488 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.000e-39
Identity = 104/191 (54.45%), Postives = 121/191 (63.35%), Query Frame = 1

		  
Query: 1   MMGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 60
           MMGRSPCCDE+GL KGPWTPEED  LVDYI +HGHGS+        ++    S R++   
Sbjct: 20  MMGRSPCCDENGLKKGPWTPEEDSILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTN 79

Query: 61  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 120
                        +   T     A  G   SAIA+HL G T+NEIKNFWNTHLKKKLLQ+
Sbjct: 80  YLRPDIKRGKFSEEEEQTIINLHAVLGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLLQM 139

Query: 121 GIDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 174
           GID VTHRPRTDLN+LANLPQLL A N   S +MN      IP L++ LR L+SDA QLA
Sbjct: 140 GIDPVTHRPRTDLNILANLPQLLAAANF--SSLMN------IP-LDNALR-LQSDAAQLA 199

[Close]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Match: W9QDG2_9ROSA (Transcription factor OS=Morus notabilis GN=L484_019668 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.300e-37
Identity = 99/192 (51.56%), Postives = 120/192 (62.50%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSP  DE+GL KGPWTPEED+KLVDYI R+GHGS+        ++    S R++    
Sbjct: 1   MGRSPSSDENGLKKGPWTPEEDQKLVDYIRRNGHGSWRALPKLAGLNRCGKSCRLRWTNY 60

Query: 62  ----------SKPSSTFAMCL-ATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                     ++      + L A  G   S IA HL G T+NEIKNFWNTHLKKKLLQ+G
Sbjct: 61  LRPDIKRGKFTEDEEKLIINLHAVLGNKWSTIAGHLPGRTDNEIKNFWNTHLKKKLLQMG 120

Query: 122 IDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDT--LRLLESDATQL 174
           ID VTHRPRTDLN+L+NLPQL+ A N   +  +NN++ N  P   DT  LRL  SD  QL
Sbjct: 121 IDPVTHRPRTDLNILSNLPQLIAAANFATT-FLNNTSNNNNPFSLDTSNLRLSYSDTAQL 180

[Close]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.100e-26
Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 1

		  
Query: 2   MGRSPCCDES-GLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 61
           MGRSPCCD+  G+ KGPW PEED KL  YI+ +G+G++        ++    S R++   
Sbjct: 1   MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMN 60

Query: 62  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 121
                           ST     A  G   S IA HL G T+NEIKN+WNTH++KKLLQ+
Sbjct: 61  YLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM 120

Query: 122 GIDHVTHRPRT-DLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRL 155
           GID VTH PRT DL+ + ++ Q+L A  + N    NN+  N    LED L+L
Sbjct: 121 GIDPVTHEPRTNDLSPILDVSQMLAAA-INNGQFGNNNLLNNNTALEDILKL 171

[Close]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Match: MYB28_ARATH (Transcription factor MYB28 OS=Arabidopsis thaliana GN=MYB28 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.300e-19
Identity = 54/128 (42.19%), Postives = 67/128 (52.34%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           M R PCC   GL KG WT EEDKKL+ YI  HG G +        +     S R++    
Sbjct: 1   MSRKPCCVGEGLKKGAWTTEEDKKLISYIHDHGEGGWRDIPQKAGLKRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 113
                      S+      M  A+ G   S IA HL   T+NEIKN+WNTHLKK+L++ G
Sbjct: 61  LKPEIKRGEFSSEEEQIIIMLHASRGNKWSVIARHLPRRTDNEIKNYWNTHLKKRLMEQG 120

[Close]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.400e-19
Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           M R+PCC E G+ KG WTPEED+KL+ Y+  HG G +        +     S R++    
Sbjct: 1   MVRTPCCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKAGLKRCGKSCRLRWANY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 113
                       +   T     A  G   +AIA+ L+G T+NEIKN+WNT+LKK+L Q G
Sbjct: 61  LRPDIKRGEFSPEEDDTIIKLHALKGNKWAAIATSLAGRTDNEIKNYWNTNLKKRLKQKG 120

[Close]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.100e-18
Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSPCC++   NKG WT EED KL+ YI  HG G +        +     S R++    
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 62  SKPS---STFAM----------CLATSGRSAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 113
            +P      F +           L  +  S IA+ L G T+NEIKN+WNTH+K+KLL+ G
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

[Close]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Match: MYB29_ARATH (Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.400e-18
Identity = 55/128 (42.97%), Postives = 65/128 (50.78%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           M R PCC   GL KG WT EEDKKL+ YI  HG G +        +     S R++    
Sbjct: 1   MSRKPCCVGEGLKKGAWTAEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANY 60

Query: 62  SKPS-----------STFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 113
            KP                M  A+ G   S IA HL   T+NEIKN+WNTHLKK L+  G
Sbjct: 61  LKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEIKNYWNTHLKKLLIDKG 120

[Close]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Match: AT3G02940.1 (myb domain protein 107)

HSP 1 Score: 148.3 bits (373), Expect = 4.700e-36
Identity = 83/188 (44.15%), Postives = 112/188 (59.57%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSPCCDESGL KGPWTPEED+KL+++I +HGHGS+        ++    S R++    
Sbjct: 1   MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                      ++   T     +  G   S+IA HL G T+NEIKN+WNTH++KKL+Q+G
Sbjct: 61  LRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKLIQMG 120

Query: 122 IDHVTHRPRTD-LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 172
           ID VTHRPRTD LN+LA LPQLL A N  N L +N +              ++ DAT +A
Sbjct: 121 IDPVTHRPRTDHLNVLAALPQLLAAANFNNLLNLNQN--------------IQLDATSVA 174

[Close]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Match: AT1G34670.1 (myb domain protein 93)

HSP 1 Score: 145.6 bits (366), Expect = 3.100e-35
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSPCCDE+GL KGPWTPEED+KL+DYI +HGHGS+        ++    S R++    
Sbjct: 1   MGRSPCCDENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                      ++   T     +  G   SAIA+HL G T+NEIKNFWNTHLKKKL+Q+G
Sbjct: 61  LRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKLIQMG 120

Query: 122 IDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAK 172
           ID VTH+PRTD  L A+LPQL+   NL++ +   +   +           ++ +A QLA 
Sbjct: 121 IDPVTHQPRTD--LFASLPQLIALANLKDLIEQTSQFSS-----------MQGEAAQLAN 174

[Close]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Match: AT5G16770.1 (myb domain protein 9)

HSP 1 Score: 141.7 bits (356), Expect = 4.400e-34
Identity = 82/188 (43.62%), Postives = 109/188 (57.98%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSPCCDE+GL KGPWT EED KL+D+I +HGHGS+        ++    S R++    
Sbjct: 1   MGRSPCCDENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                       +   T     +  G   S+IA +L G T+NEIKN+WNTHL+KKLLQ+G
Sbjct: 61  LRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQMG 120

Query: 122 IDHVTHRPRTD-LNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLA 172
           ID VTHRPRTD LN+LA LPQL+ A N  + L +N +              ++ DAT LA
Sbjct: 121 IDPVTHRPRTDHLNVLAALPQLIAAANFNSLLNLNQN--------------VQLDATTLA 174

[Close]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Match: AT5G65230.1 (myb domain protein 53)

HSP 1 Score: 126.7 bits (317), Expect = 1.500e-29
Identity = 76/187 (40.64%), Postives = 105/187 (56.15%), Query Frame = 1

		  
Query: 2   MGRSPCCDESGLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK---- 61
           MGRSP  DE+GL KGPW PEED KL++YI +HGH S++       ++    S R++    
Sbjct: 1   MGRSPSSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLRWTNY 60

Query: 62  -----------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQIG 121
                      ++   T     A  G   S IASHL G T+NEIKNFWNTHLKKKL+Q+G
Sbjct: 61  LRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKLIQMG 120

Query: 122 IDHVTHRPRTDLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRLLESDATQLAK 172
            D +TH+PRTD ++ ++L QL+   NLR  + +        P  +  L  L+   T++AK
Sbjct: 121 FDPMTHQPRTD-DIFSSLSQLMSLSNLRGLVDLQQQ----FPMEDQALLNLQ---TEMAK 179

[Close]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Match: AT4G17785.1 (myb domain protein 39)

HSP 1 Score: 121.3 bits (303), Expect = 6.200e-28
Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 1

		  
Query: 2   MGRSPCCDES-GLNKGPWTPEEDKKLVDYIDRHGHGSFAGPTTFVLISNAESSLRMK--- 61
           MGRSPCCD+  G+ KGPW PEED KL  YI+ +G+G++        ++    S R++   
Sbjct: 1   MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMN 60

Query: 62  ------------SKPSSTFAMCLATSGR--SAIASHLSGSTNNEIKNFWNTHLKKKLLQI 121
                           ST     A  G   S IA HL G T+NEIKN+WNTH++KKLLQ+
Sbjct: 61  YLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM 120

Query: 122 GIDHVTHRPRT-DLNLLANLPQLLMAVNLRNSLMMNNSTGNGIPTLEDTLRL 155
           GID VTH PRT DL+ + ++ Q+L A  + N    NN+  N    LED L+L
Sbjct: 121 GIDPVTHEPRTNDLSPILDVSQMLAAA-INNGQFGNNNLLNNNTALEDILKL 171

The following BLAST results are available for this feature:

BLAST of Spo26416.1 vs. NCBI nr
BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
BLAST of Spo26416.1 vs. TAIR (Arabidopsis)

BLAST of Spo26416.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902219716\|gb\|KNA18385.1\|	1.6e-65	100.	hypothetical protein SOVF_0712...	[more]
gi\|902226784\|gb\|KNA20480.1\|	1.0e-61	68.6	hypothetical protein SOVF_0520...	[more]
gi\|731320966\|ref\|XP_010671094.1\|	1.2e-49	60.3	PREDICTED: transcription facto...	[more]
gi\|590639216\|ref\|XP_007029608.1\|	1.5e-39	54.4	Myb domain protein 107 [Theobr...	[more]
gi\|297737290\|emb\|CBI26491.3\|	1.8e-37	50.7	unnamed protein product [Vitis...	[more]

BLAST of Spo26416.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RFX9_SPIOL	1.1e-65	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RLU6_SPIOL	7.3e-62	68.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CSV0_BETVU	8.4e-50	60.3	Uncharacterized protein OS=Bet...	[more]
A0A061EYD8_THECC	1.0e-39	54.4	Myb domain protein 107 OS=Theo...	[more]
W9QDG2_9ROSA	1.3e-37	51.5	Transcription factor OS=Morus ...	[more]

BLAST of Spo26416.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
MYB39_ARATH	1.1e-26	42.4	Transcription factor MYB39 OS=...	[more]
MYB28_ARATH	1.3e-19	42.1	Transcription factor MYB28 OS=...	[more]
MYB34_ARATH	8.4e-19	39.8	Transcription factor MYB34 OS=...	[more]
MYB32_ARATH	1.1e-18	41.4	Transcription factor MYB32 OS=...	[more]
MYB29_ARATH	1.4e-18	42.9	Transcription factor MYB29 OS=...	[more]

BLAST of Spo26416.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT3G02940.1	4.7e-36	44.1	myb domain protein 107	[more]
AT1G34670.1	3.1e-35	42.7	myb domain protein 93	[more]
AT5G16770.1	4.4e-34	43.6	myb domain protein 9	[more]
AT5G65230.1	1.5e-29	40.6	myb domain protein 53	[more]
AT4G17785.1	6.2e-28	42.4	myb domain protein 39	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 15..39 score: 1.
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 14..98 score: 1.
IPR009057	Homeodomain-like	GENE3D	1.10.10.60		coord: 6..36 score: 1.0E-16coord: 72..102 score: 1.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 15..97 score: 1.0
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 10..96 score: 7
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 68..171 score: 6.7E-48coord: 1..37 score: 6.7
None	No IPR available	PANTHER	PTHR10641:SF537	F21H2.9 PROTEIN-RELATED	coord: 68..171 score: 6.7E-48coord: 1..37 score: 6.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006996	organelle organization
biological_process	GO:0043933	protein-containing complex subunit organization
cellular_component	GO:0000785	chromatin
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0015299	solute:proton antiporter activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18766	0.72	Barchart \| Table
Spo16679	0.71	Barchart \| Table
Spo09998	0.68	Barchart \| Table
Spo10253	0.66	Barchart \| Table