Spo26421 (gene)

Overview
NameSpo26421
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNADH dehydrogenase 1 beta subcomplex subunit 8
LocationSpoScf_01155 : 122766 .. 129977 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGCAATGAATCTATTTGTAGTCATCTACATTACGTTCTCTTAGCCCATTAACATATGCTCAATCCTTCGGCCTAGGACATGAGAGTTTGACGAACCACCATTTTCAGTGTGTGTGGATCAACAACCGAACTCCCTCGTCAGTCGTCTCGCAAATCAAACCATCGCCGGTGAAAGAGAGAGTGAAATCAAATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGGTTTCTCTCTCCTCATTTTCTCTTTAGTTAAATACTCATAATTTGTTTTTCGCTTTACAATCGGACTTAATTCTGGTTTAATATTTTCTGAAATTGATTGCGGGCATTAGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGGTTAGGGTTCGATATTGATATTGATAGTTAGTAATTAAAATCAAAATCATTAGGGTTGAGTTATTAATTTTGTTGGTTTGGGAATTTCAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTGTAAGTTCTTTTTTCCTTTTTCTTTTATTAGGGTTTTGTCTGACATGTGATCTCAATTGGGTTAGCTGATGAGACATTTTGATTTGTTCATTTTCCTAATTTGGATAGAATAGTTGCTACGATTGTCTAGTTGCGAACCTTTGAATGTCTGTATTTAGGTAGAAGCATTTTACTGAGTATTTAAATTTGACTGCATTGCATTTGATTGCCATATGCTAGCTATAATTTCTTGCTGTAGTTCTTCCCAATTCCTCCATTTTAACAGCCCTTTCTGTAGATGGTAATAAATAGGGTAATGGTAATGGTAATGATTTTATATGTATGAGCTTTTGCTAGTAGACACATGGTAGGATTAGAAGCTCATACATATAAAATCATTACCATTACATATAAAATTGCCTTCTATTTGGCCCGACAGGTTTATGTAAATATGTTACAAAATACAAATGGATCTTTGTGTCTTGTGAATTTCTGTTAAGAGTACAATTTCTTCGGCGTGTTTTGTGTTTAAATCTCAAAATCCATGGGAATATGGGATTGAGAAATGGAGTCATGTCATCATGTCAAGTTAAGTTTTGCACTACCAGAAATAGAGGCATAGGAATCATTTACCAAGATGAATCCAGATAGTATTCTTTGTATCATCACTGATCACTAACATATGGTAGAGGTTTTGGAACATCGAATGAGCTCAATGACCTCGAGTAAGGTCTTTTTTATTCGTGCAATAGTTAGCTTCACTATAAAACTTGCCGAAAACAAGAAGTTAGGTACTTCCTTTATAATCACTTTTTATCTCCATGAGAGCATCTGAGCATGAGAAGACTGCTCTTTTGCTTTTTGTCTGACAGACGCTGGTGTGACCTTGCCTAATATCTGAACAAAGAGATTGTTAAGTATACTTAAATCATTGTAAATATCCATGCTTTACTTTGTCACTGGTCTTAGCTGTAGATATATGGTTTACTCTCTACCTCTAATTTTAGAAGGCTTGGGTGTTGGCTGAGTGGGTACTATGTTATTTATGGGTTTAAACCTTAGGTTTGAGGAGAGTTGATCCGTTATTTGTCTGAACTAGCTGTATAGCTCGGCGTTCTAGGACTGCATAATTAGGGTGGGAGCGTTGTTACATATTTAAATGTACTATGTTTCCTCCTAAAAAATAAAACATGTTGACAATTTGACATAAAGTCCTATTTATCAATAATGTTACCTAGTTTTGTTAGACTAGCTCAACTGTGTACTGATCAGTCCAGTATACCATGTACTAGTGAGCATGTTCTGTAACTTGATTGGGGGTGGGGTTAAGCCAACTAGGTTAGGGTGGATAAGTAAGGCTTTTAAGTTTGTTGTGAACCTTGTAATATGGCGCTTAAGACGCCATAAACTTGAGTGAGTTCCAGGGGTGAGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGCTTTAAAGTATGTCGTGAGCCTTGTCAAATGGCGCTAAAGACCCGAGTGTGTTTCGAGGGTGGGGGGAGTGGGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGTTGTTAAGTATGTCATGAAACTTGTAACATGGCGCTTCAGATGTTTAACTTGAGTGCTTTCTGTCTTTAACGTATGTGGATCGAAGTAACTTGAAGGTAACAAAAGTTACATGGCAGCATGAGTAACTAGTAACAAATATTTGTTCTACTATTCTTTCTTTCCTGTTTTTTTCCCCTTGTACTTTTGCTTGTGTGCTAGTTTTCAACAGTTTGATGGTAGTGATCTATTGGTCTTTTTTTCTACCAAGTTCTTTACTTGTCTACCTGTCCCCCCCACCTGTTGGGTTGCTAAAGTGTTGAAGTTGTAATCAAGGACATGTTTAGCCAAGCTTCTCGAAAAGAACATTTTCTCCACTTTTCCAGAAGCTATATCTACATAAATTTTAGTTGTTTGACCTTAGTTTTAAAAAGCGCGCTTTTTTGCGCTTAAAGCTCGGAAGCTCAGAAGCTCACACCAAAACGCTTCTACCAGCCGAAGCCCAGCGACATACAAGAAGCGCGCGCTTCCTAGCGCTTCGGTGCTTCTGCGCTTCCTAGCGCTTTTGCGCTTCCTGTAGTCTAGGCACTTCAGACCCTTCTTTTCTATAACAAATAAAGCCACGTGACTCTAATCTTCTTTTTAAAAGTATCACGTGATTTTTTTTTTTAAAAAGCGAATATTTGGGAAGTTTTTGAAAACCTTAGTGCAATTTTCTCCCGTAGCCGGATTTCTCTAGCCTTCTCGCCGGATTTCTCCCGTCTGATTCTGAATTTTTCTTTCATCGTTTTGATTTCTCTATTTTTTTTCCATCTTTTCTTTCCATATTTTCTCCATATGTTCTGAACTTTTGAAAATTTATTATTTCTTTTCGGGTGTGCTTCGCCTACGAAAAGCGTGCGCTTTCGCTTTGCGCTTAAGCTCCAGGGCCCTTTTGCGCTTCAATGCGCTTCGCGCTTTTTAAAACTAAGTGTTTGACCAATCTAATTCGAGAAGTGTTTTTTTAAGAAACAAAAAACTCTTACAGTGTTTGGCCCATTTTTAATGAACTTTTGGCCTCTTTATTTTTTATTCCTTCCTCTCCCTTCTCCCCTAGCCCACTCTGTCCTTTTCTCAGTAACGATGAGTAAACACTATTGTTTGTAAAAAAATGATGGACTGATGGTACTCACCATCATGAAAAGGAAATCATGTTATCAAATCCAAATCTGATACCCATCAACACAGTGTTAGATTTCAACCATTTTATAACTGCAAATAATTGATATGGATTGATGTTACTCACCATTTTCAAAGAGTGAATATTTGTTGTTAATTACTAGTATGATTTGTGTGAGAGAGATGTTAGGATGTCCATACTTTTTCTATCAAGGGTATTTATTGCCAATATAAACTTTCATTAAATGGGGTAAAACAGTTCCCTAGAAACCGAAAGCGTAAGCTACAACTTAGATCTTCTGTTTCTAGTGGGCTTGGGAGCTTATTTGGGCCATATATCCTTGTCTAACCTTGGCCTGTTTCTGCTTTCTATAGGGGAGTATTTGAGTATTTCCCTTCGTAATCATTCCAACACTAGAAGGATTTGGCATATTAAAGTTTTATCCAAACAAGGGAAGAAGAATCCCTCACCTTCTCTTCCCTTCATTTCCCTGCACGTTTCACTAATAAAAACAAACCGTAAATCTCTATGAGACATGTTTCTGTAGTTCCAGAAAACATCCTCTTTAGTAAACCAAAAGAATATTTTAGATCTGTTGATATGTAGGAGTTGAAAACATCACCTGAATTGTAGTATGTTGTCATTCTTTTTTCAAAAAGTTCAGCTGAGCTGTTATTGGTTTTGTGCTCAACAGACTAATAAATCTAATTTGACTAAATGCAGATAGACCTTTCAAATCAAATGGCCAAGCTAATTCCTACATACACCGTATACTACATGAAAAATCCTTTTGAAGTTAATAATCACATTGATAGTGATAGAGATAGACTTCTAGTTGCATTAGGTTTAATAATACAATTAACACTAATGTTGACCCACTATATATATTTGACCAATGACAACACTCCAATTCACGGAGTTTCACAATATGTAACAGATAGTTCTAATCCACCATCATCAACTTGACACTTAATCCCGAACAGAGGGAGTGATAAAATATCGAACAAGACAACATTATAATTGCATGAAACCAAAATGCAAAAAAAAATAAAAAAAATAACACTTGTGAAATAAATTAAAACAAAAACCCAAATTGTGAATTCTGATTAATTCAAAGGTCACATTGGTAGTTCTAACCACACAATCGAAGTGACTAACAATTCCTCATGGAGCGAGTAATAGCATTTCACATTTCCTTCAACAATACATATTGAAAATGAAGGTTGCACAAATCAAGTAAAACAAACCTCTCGGTCTTCCCATCAGAATCCTTAGCCAGATTAACAAGCCAAAGAATAGCATCAAGTATCTGGTTCTTCGAATAACCAGGGGACTGGAGCATCGAATTATTGATTGGGTGAGGACAACCCACACATTCCAGCACCAGAAGTCCAGAACTGTCTCATCCCGAAATAAGACAGATAATAATAAATTAGGCAGAGAAACTACGGTCGAATGCTCTGTTATATATGGGTTTAAACCTTAGGTTTTAGGAGGGTTGATTTGTTATTCGTCTGAAGTGGCTGTATAGCTCGGGCTCCTAGGACTGCATAATTAGGGTGGGAGCGTTATTACATATTTAAATGTACTATGTTTCTTCCTAAAAAATAAAATATGTTGACAATTTGACATAAAATCCTATTTATCAATAATGTTACCTATAGACTAGTTCAACTGTGTACCGATCAGTCCAGTATACCATGTACTAGTGAGCATGCCCGTAACTTGATTTGTGGGGTTAAGCCAACTAGGTTAGGGTGGATAAGTGAAGCTTTTAAGTTCATTGAGAACCTTGTAACATGGCGCTTAAGACGTTATAAAACTTGAGTGAGTTCCAGGGGTGGGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGCTTTAAAGTATGTTGTGAGCCTTGTCAAATGGCGCTAAAGACCCGAGTGTGTTTCGAGGGTGGGGGAGTGGGGTTAAGCCAATTAGGTTACGGTGGATAGATGAGGTTGTTAATTTTGTCGTGAAACTTGTAACATGGCGCTTAAGATGTCATAAAACTTGAGTGCGTTCTGTCAACATATGTGGATTGGGGTAACTTGAAGGTAACAAAAGTTACATGGCAGCATGAGTAACTAGTAACAAATATTTGTTCTACTATTCTTTGTTTCCTGTTTTTTTTCCCTTGTACTTTTGCTTGTGTGCTAGTTTTCAACAATTTGATGGTAGTGATCTATTGGTCTTTTTTTCTACCAAGTTCTTTACTTGTCTACCTGTCTCCCCCACCTGTTGGGTTGCTAAAGTGTTGAAGTTTGCAATTAAGGACCTGTTTAGCCAAGCTTCCCGAAAAGAACAGTTTCCTCACTTTTCCAGAAGCTATATTTACATAAATTTTTAGTTGTTTGACCAAACAAATTTAAGAATTGTTTTTAAGAAACAAAAACACTCTTACAGTGTTTGGCCCATTTTTAATGAATTTTTGGCCCTTTTTATTTCTTATTCCTTCGTCTCCCTTCTCCCCTAGCCCTCTCTGTCCCTATTTCAGTAACGACGAGTAATCACTATTGTTTATAAAAAACAATGATGGATTTATCGTACTCACCATTATGAAAAGAAAAATCATGTTATCAAATCCAAATCTGATACCCATCAACACTGTATGTTAGATTTCAACCATTTTATAACTGCAAATAATTGATATTGATTGATGTTACTCACCATATTCAAAGAGAGTGAATATTTGCTGTTAATTTCTAGTATGATTTGTGTGTGAGAGATGTTAGGATGTCCATACTTTTTCTATCAAGGGTATTATTGCCAATATAACTTTTCGTTAAATGGGGCAAAACAGTTCCCAAGAAACCGAAAGTGGAAGCTACAACTTAGATCTTCTGTTTCTAGTGGGCTTGGGATCTTATTTGGGCCATATATCCTTGTCTGGCCATGGCCTTGTTTCTGAATCTATAGGGGAGTATTTGAGTATTTCCCTTCCGAATCTCTCCCAACACTAGAAGGATTTGGCATATTAAAGTTTTGTCCAAACAAGTGAAGAAGAATCCCTCACCTTCTCTTCCCTCCATTTCCCTTCACGTTGCACTAATACAAACAAACTGTAAATCTCTTTGAGACATGTTTGTTTTAGTTCCACAAAACATCTCTTTAGTAAACCTAAAGATTATTTTAGATCCGTGGATTTGTTGGAGTTGAAACATCACCTGAATTGTAGTAGGTTGTCATTCTTTTTTCAAAAAGTTGAGCTGAAAATCTTGATTTTGAGGATGTTGAAGTTGGATATTTTGTTTGAGGTATTTGTAAGTTCTTAATTTCTTGCTAATCACTCACTATTAATGGTTTTGTGCTCAACAGACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAGATGGATCTGTATTGGGACAATTGTATCAAATGTTATTCAGCTACATGGCCCTCATTTTACATTTTATATTTTATTTCCGTTTGTAACTCTGGGGTTTTGAAAATAAATATCTGACATTGTTGTTAGTTCTGTTGTTTCTAAAATTGGTAAGGGATATGGTTGGTACCTTTTATGGTAATGGTGATGCTGCTTTTTTGTTGTAAATGGCAACTATAAATCTGTAATAAGTTTGTAGATCTTGGGACTGCTTGCTCTAACAACCAAGTATTGATGTAGTGTTTAATACCTCATTCTCCAGTTACCACTAACAAAGCTTAATTTGCTGGAAATCCCACTGGTTCATAGATGGGATGGACTAAAGATACAAATAAATATGGAATGGTGAAGTCTGTGAGACCTGAAGATCATCCCCGC

mRNA sequence

TAGGCAATGAATCTATTTGTAGTCATCTACATTACGTTCTCTTAGCCCATTAACATATGCTCAATCCTTCGGCCTAGGACATGAGAGTTTGACGAACCACCATTTTCAGTGTGTGTGGATCAACAACCGAACTCCCTCGTCAGTCGTCTCGCAAATCAAACCATCGCCGGTGAAAGAGAGAGTGAAATCAAATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAGATGGATCTGTATTGGGACAATTGTATCAAATGTTATTCAGCTACATGGCCCTCATTTTACATTTTATATTTTATTTCCGTTTGTAACTCTGGGGTTTTGAAAATAAATATCTGACATTGTTGTTAGTTCTGTTGTTTCTAAAATTGGTAAGGGATATGGTTGGTACCTTTTATGGTAATGGTGATGCTGCTTTTTTGTTGTAAATGGCAACTATAAATCTGTAATAAGTTTGTAGATCTTGGGACTGCTTGCTCTAACAACCAAGTATTGATGTAGTGTTTAATACCTCATTCTCCAGTTACCACTAACAAAGCTTAATTTGCTGGAAATCCCACTGGTTCATAGATGGGATGGACTAAAGATACAAATAAATATGGAATGGTGAAGTCTGTGAGACCTGAAGATCATCCCCGC

Coding sequence (CDS)

ATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAG

Protein sequence

MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTPFPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVELGEEP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26421.1Spo26421.1mRNA


Homology
[Close]
BLAST of Spo26421.1 vs. NCBI nr
Match: gi|902227916|gb|KNA20886.1| (hypothetical protein SOVF_048320 [Spinacia oleracea])

HSP 1 Score: 257.3 bits (656), Expect = 1.400e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP
Sbjct: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LGEEP
Sbjct: 121 LGEEP 125
[Close]
BLAST of Spo26421.1 vs. NCBI nr
Match: gi|727534013|ref|XP_010441437.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQR+GMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRSGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV NDKAST PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAALGLLAVFNDKASTVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. NCBI nr
Match: gi|565435540|ref|XP_006281322.1| (hypothetical protein CARUB_v10027375mg [Capsella rubella])

HSP 1 Score: 226.5 bits (576), Expect = 2.600e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFATLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. NCBI nr
Match: gi|727648870|ref|XP_010494996.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 225.3 bits (573), Expect = 5.800e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQR+GMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRSGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AVVNDKAST PFT +VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAALGLLAVVNDKASTVPFTRRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. NCBI nr
Match: gi|297790901|ref|XP_002863335.1| (hypothetical protein ARALYDRAFT_494216 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 223.4 bits (568), Expect = 2.200e-55
Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048320 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.600e-66
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP
Sbjct: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LGEEP
Sbjct: 121 LGEEP 125
[Close]
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: R0GPD3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027375mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.800e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFATLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: D7MP34_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494216 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.500e-55
Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: A0A087GNA9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G102500 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.600e-55
Identity = 107/125 (85.60%), Postives = 113/125 (90.40%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WL GGL FFA LGL AV NDKAST P+TP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFAALGLLAVFNDKASTVPWTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: M5X4A1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013399mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.000e-54
Identity = 107/125 (85.60%), Postives = 111/125 (88.80%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVVSRSV +SLR RAGMGLPVGKH+VPN+PL VNDEL WDNGTP
Sbjct: 1   MAGRLSSVASKIMGGNGVVSRSVASSLRLRAGMGLPVGKHIVPNRPLHVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLSFFA LGL AV NDKAS  PF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. ExPASy Swiss-Prot
Match: NDUB8_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.000e-57
Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FF  LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
[Close]
BLAST of Spo26421.1 vs. TAIR (Arabidopsis)
Match: AT5G47570.1 (unknown protein)

HSP 1 Score: 221.9 bits (564), Expect = 2.300e-58
Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 1 

		  

Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FF  LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125
The following BLAST results are available for this feature:
BLAST of Spo26421.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902227916|gb|KNA20886.1|1.4e-65100.hypothetical protein SOVF_0483... [more]
gi|727534013|ref|XP_010441437.1|2.0e-5687.2PREDICTED: NADH dehydrogenase ... [more]
gi|565435540|ref|XP_006281322.1|2.6e-5687.2hypothetical protein CARUB_v10... [more]
gi|727648870|ref|XP_010494996.1|5.8e-5687.2PREDICTED: NADH dehydrogenase ... [more]
gi|297790901|ref|XP_002863335.1|2.2e-5586.4hypothetical protein ARALYDRAF... [more]
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BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RMY2_SPIOL9.6e-66100.Uncharacterized protein OS=Spi... [more]
R0GPD3_9BRAS1.8e-5687.2Uncharacterized protein OS=Cap... [more]
D7MP34_ARALL1.5e-5586.4Putative uncharacterized prote... [more]
A0A087GNA9_ARAAL2.6e-5585.6Uncharacterized protein OS=Ara... [more]
M5X4A1_PRUPE1.0e-5485.6Uncharacterized protein OS=Pru... [more]
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BLAST of Spo26421.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDUB8_ARATH4.0e-5785.6NADH dehydrogenase [ubiquinone... [more]
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BLAST of Spo26421.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G47570.12.3e-5885.6unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36401FAMILY NOT NAMEDcoord: 2..125
score: 9.8
NoneNo IPR availablePANTHERPTHR36401:SF1NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIALcoord: 2..125
score: 9.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006457 protein folding
biological_process GO:0009853 photorespiration
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0006417 regulation of translation
biological_process GO:0000387 spliceosomal snRNP assembly
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0046686 response to cadmium ion
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0007165 signal transduction
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006952 defense response
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0071555 cell wall organization
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0006412 translation
biological_process GO:0009308 amine metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009987 cellular process
cellular_component GO:0005840 ribosome
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005684 U2-type spliceosomal complex
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0044425 membrane part
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009507 chloroplast
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005634 nucleus
cellular_component GO:0005777 peroxisome
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016004 phospholipase activator activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
RNA-Seq Expression