Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGCCCAGTTCATTGAAAGGCACCGAGAAAATGCAGAAATATTCAGCGGTTCCGATCTGTGCAAACAAAAATCAATAGAACTGTTGGTAGAGCTGAACATGCCAAACGGTCTTCTTCCAATGGACGATATTGAGGAGGTTGGGTATAACCGTTCGACCGGGTTCGTGTGGTTGACCCAAAAAAAGGCGATCCAACACCGATTCACCAAGATTGGTAAACAAGTATCCTACGATACTCATGTGACTGCTTTTGTTGAGAACCGTAAGATGAAAAAGCTTCATGGAGTCAAAGCTAAGGAACTCTTGATCTGGATTACTCTTAATGAGATCTCAATCGATGATCCTAGTTCTGGTAAAATTGTCTTTGGTACCCCTACTGGTATTTCCCGTTCTTACCCAATTTCTGCGTTTGAGGTGGAGAACAAATGA ATGTCAGCCCAGTTCATTGAAAGGCACCGAGAAAATGCAGAAATATTCAGCGGTTCCGATCTGTGCAAACAAAAATCAATAGAACTGTTGGTAGAGCTGAACATGCCAAACGGTCTTCTTCCAATGGACGATATTGAGGAGGTTGGGTATAACCGTTCGACCGGGTTCGTGTGGTTGACCCAAAAAAAGGCGATCCAACACCGATTCACCAAGATTGGTAAACAAGTATCCTACGATACTCATGTGACTGCTTTTGTTGAGAACCGTAAGATGAAAAAGCTTCATGGAGTCAAAGCTAAGGAACTCTTGATCTGGATTACTCTTAATGAGATCTCAATCGATGATCCTAGTTCTGGTAAAATTGTCTTTGGTACCCCTACTGGTATTTCCCGTTCTTACCCAATTTCTGCGTTTGAGGTGGAGAACAAATGA ATGTCAGCCCAGTTCATTGAAAGGCACCGAGAAAATGCAGAAATATTCAGCGGTTCCGATCTGTGCAAACAAAAATCAATAGAACTGTTGGTAGAGCTGAACATGCCAAACGGTCTTCTTCCAATGGACGATATTGAGGAGGTTGGGTATAACCGTTCGACCGGGTTCGTGTGGTTGACCCAAAAAAAGGCGATCCAACACCGATTCACCAAGATTGGTAAACAAGTATCCTACGATACTCATGTGACTGCTTTTGTTGAGAACCGTAAGATGAAAAAGCTTCATGGAGTCAAAGCTAAGGAACTCTTGATCTGGATTACTCTTAATGAGATCTCAATCGATGATCCTAGTTCTGGTAAAATTGTCTTTGGTACCCCTACTGGTATTTCCCGTTCTTACCCAATTTCTGCGTTTGAGGTGGAGAACAAATGA MSAQFIERHRENAEIFSGSDLCKQKSIELLVELNMPNGLLPMDDIEEVGYNRSTGFVWLTQKKAIQHRFTKIGKQVSYDTHVTAFVENRKMKKLHGVKAKELLIWITLNEISIDDPSSGKIVFGTPTGISRSYPISAFEVENK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26441.1 vs. NCBI nr
Match: gi|902189878|gb|KNA11491.1| (hypothetical protein SOVF_134730 [Spinacia oleracea]) HSP 1 Score: 290.8 bits (743), Expect = 1.300e-75 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
BLAST of Spo26441.1 vs. NCBI nr
Match: gi|731326893|ref|XP_010674249.1| (PREDICTED: uncharacterized protein LOC104890449 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 259.2 bits (661), Expect = 4.200e-66 Identity = 121/143 (84.62%), Postives = 135/143 (94.41%), Query Frame = 1
BLAST of Spo26441.1 vs. NCBI nr
Match: gi|747097207|ref|XP_011096558.1| (PREDICTED: uncharacterized protein LOC105175709 [Sesamum indicum]) HSP 1 Score: 209.5 bits (532), Expect = 3.800e-51 Identity = 98/141 (69.50%), Postives = 120/141 (85.11%), Query Frame = 1
BLAST of Spo26441.1 vs. NCBI nr
Match: gi|719971476|ref|XP_010274785.1| (PREDICTED: uncharacterized protein LOC104610025 [Nelumbo nucifera]) HSP 1 Score: 205.3 bits (521), Expect = 7.100e-50 Identity = 97/143 (67.83%), Postives = 119/143 (83.22%), Query Frame = 1
BLAST of Spo26441.1 vs. NCBI nr
Match: gi|225444549|ref|XP_002275796.1| (PREDICTED: uncharacterized protein LOC100265752 [Vitis vinifera]) HSP 1 Score: 203.0 bits (515), Expect = 3.500e-49 Identity = 95/142 (66.90%), Postives = 121/142 (85.21%), Query Frame = 1
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY79_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134730 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 9.000e-76 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPD4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077350 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 2.900e-66 Identity = 121/143 (84.62%), Postives = 135/143 (94.41%), Query Frame = 1
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Match: D7TK50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03300 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.500e-49 Identity = 95/142 (66.90%), Postives = 121/142 (85.21%), Query Frame = 1
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Match: A0A068VG18_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010891001 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 2.700e-48 Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 1
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Match: B9H2B8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06350g PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 4.600e-48 Identity = 91/143 (63.64%), Postives = 116/143 (81.12%), Query Frame = 1
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Match: AT1G56580.1 (Protein of unknown function, DUF538) HSP 1 Score: 167.2 bits (422), Expect = 7.600e-42 Identity = 82/132 (62.12%), Postives = 104/132 (78.79%), Query Frame = 1
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Match: AT1G09310.1 (Protein of unknown function, DUF538) HSP 1 Score: 160.2 bits (404), Expect = 9.300e-40 Identity = 77/134 (57.46%), Postives = 104/134 (77.61%), Query Frame = 1
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Match: AT5G46230.1 (Protein of unknown function, DUF538) HSP 1 Score: 157.5 bits (397), Expect = 6.000e-39 Identity = 67/130 (51.54%), Postives = 100/130 (76.92%), Query Frame = 1
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Match: AT4G24130.1 (Protein of unknown function, DUF538) HSP 1 Score: 125.2 bits (313), Expect = 3.300e-29 Identity = 57/134 (42.54%), Postives = 89/134 (66.42%), Query Frame = 1
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Match: AT1G30020.1 (Protein of unknown function, DUF538) HSP 1 Score: 119.4 bits (298), Expect = 1.800e-27 Identity = 51/103 (49.51%), Postives = 77/103 (74.76%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26441.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26441.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26441.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo26441.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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