Spo26473 (gene)

Overview
NameSpo26473
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 16246924 .. 16247505 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA

mRNA sequence

ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA

Coding sequence (CDS)

ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA

Protein sequence

MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNYDGYTSGSSPSFDGNFNNCHVSSWW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26473.1Spo26473.1mRNA


Homology
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|902201240|gb|KNA13945.1| (hypothetical protein SOVF_112000 [Spinacia oleracea])

HSP 1 Score: 386.0 bits (990), Expect = 4.000e-104
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1

		  

Query: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS 60
           MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS
Sbjct: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS 60

Query: 61  ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN 120
           ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN
Sbjct: 61  ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN 120

Query: 121 PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNYDGYTSGSSPSF 180
           PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNN DGYTSGSSPSF
Sbjct: 121 PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNDDGYTSGSSPSF 180

Query: 181 DGNFNNCHVSSWW 194
           DGNFNNCHVSSWW
Sbjct: 181 DGNFNNCHVSSWW 193

BLAST of Spo26473.1 vs. NCBI nr
Match: gi|731372247|ref|XP_010666288.1| (PREDICTED: uncharacterized protein DDB_G0283357-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.2 bits (300), Expect = 4.100e-24
Identity = 96/213 (45.07%), Postives = 117/213 (54.93%), Query Frame = 1

		  

Query: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTT-TTA 60
           M DG GECCIARWG  H  +          NTSKMDMIMLKFRPIAPKPV         A
Sbjct: 1   MGDGNGECCIARWGDSHVTSGY--------NTSKMDMIMLKFRPIAPKPVSGNIAVGEAA 60

Query: 61  SESGGGSQGNGSSRHAKAGGRGRKKTNN-------------SCSNNRKCNNNNNHGRKRK 120
           S+S GG    G++   +   +  K+ NN             S S+NR+CNNN   GRKRK
Sbjct: 61  SQSNGGRHAKGATGSGRGRRKSSKENNNNNNNNSPGGSGTGSGSSNRRCNNN---GRKRK 120

Query: 121 SSSPDRRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNN- 180
           SSSPD +      N  + D TLLPLFPEAPDLSP+   +        +N   ++NNN+N 
Sbjct: 121 SSSPDHQK-----NDEKTDLTLLPLFPEAPDLSPSNTPK--------NNNQVHSNNNSNM 180

Query: 181 ----NNNYDG-YTSGSSPSFDGNFNNCHVSSWW 194
               N N+D    S +S SF+ N+N CH SSWW
Sbjct: 181 PFSLNFNFDDQIVSSTSFSFENNYNQCH-SSWW 188

BLAST of Spo26473.1 vs. NCBI nr
Match: gi|703132615|ref|XP_010105167.1| (hypothetical protein L484_006905 [Morus notabilis])

HSP 1 Score: 74.3 bits (181), Expect = 2.600e-10
Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 1

		  

Query: 3   DGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASES 62
           DG+G CCIAR+ GG             C+ SK+D IML+FRPIAPKPV AG  + T + +
Sbjct: 2   DGRGGCCIARYSGGEVYG---------CDMSKVDRIMLRFRPIAPKPVAAGDGSGTGART 61

Query: 63  GGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAG--- 122
               +  G SR    GGRG+++       N++CNN NN   K++ +SPD  +   +G   
Sbjct: 62  ---EKNEGQSR----GGRGKRRYARD-GGNKRCNNGNN---KKRRASPDHHDQKRSGALV 121

Query: 123 NPNQQDP---TLLPLFPEAPDLSPTGQDQVHNVMPFWHNID 158
           + +Q D    TLLPL PE P+      D V +  P W + D
Sbjct: 122 SDHQDDQTVVTLLPLLPETPEPKEQRSDPV-SPPPTWLSFD 141

BLAST of Spo26473.1 vs. NCBI nr
Match: gi|1009130496|ref|XP_015882332.1| (PREDICTED: uncharacterized protein LOC107418172 [Ziziphus jujuba])

HSP 1 Score: 73.6 bits (179), Expect = 4.400e-10
Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = 1

		  

Query: 3   DGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASES 62
           DG+G CCIAR+ GG              + SK+D IML+FRPIAPKP  +G      S S
Sbjct: 2   DGRGGCCIARYAGGGAY-----------DMSKVDRIMLRFRPIAPKPATSG------SVS 61

Query: 63  GGGSQGNGSSRHAKAGGRGRKK-TNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGNP 122
           GG +     S H+  GGRG++K   +  +NNR+CNNNNN  RKRKSS  ++R    A   
Sbjct: 62  GGSTPE--ISEHSVKGGRGKRKYVRDHGNNNRRCNNNNN--RKRKSSPEEKRVSSVA--T 121

Query: 123 NQQDPTLLPLFPEAPDL--SPTGQDQVHNVMPFWHNIDCYNNNN 164
             +    LPL PE P+   SP          P W + D  +NNN
Sbjct: 122 AVEPMVTLPLLPETPEPKDSPARVSPEVRDSPMWLSFDKLDNNN 142

BLAST of Spo26473.1 vs. NCBI nr
Match: gi|902173920|gb|KNA08323.1| (hypothetical protein SOVF_163620 [Spinacia oleracea])

HSP 1 Score: 64.3 bits (155), Expect = 2.600e-7
Identity = 66/181 (36.46%), Postives = 86/181 (47.51%), Query Frame = 1

		  

Query: 4   GKGECCIARWGGGHTAAVVATAAEDYCN---TSKMDMIMLKFRPIAPKPVVAGTTTTTAS 63
           G G CCIA++G  H         ++Y N    SKMD IML+FRPIAPKPV  GTTTTT S
Sbjct: 7   GGGGCCIAQYGHHHGPT------QNYYNPYDASKMDRIMLRFRPIAPKPVPGGTTTTTTS 66

Query: 64  ---------ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPD 123
                         S   G  R++ A G G KK   SCS +   + NNN+ +K  +SS +
Sbjct: 67  TTTTTTTTTNDTSMSSRRGKKRNSAATGTGGKKKRKSCSPD---DTNNNNNKKCDASSSN 126

Query: 124 RRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQV------HNVMPFWHNIDCYNNNNNN 167
                       +    LPL PE PDLSP   +QV       +  P W    C+ +++  
Sbjct: 127 ----------GCKVTVTLPLLPETPDLSPRKNNQVGLGQSKSSPEPMWL---CFGSSDQT 165

BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R362_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112000 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.800e-104
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1

		  

Query: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS 60
           MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS
Sbjct: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTAS 60

Query: 61  ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN 120
           ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN
Sbjct: 61  ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGN 120

Query: 121 PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNYDGYTSGSSPSF 180
           PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNN DGYTSGSSPSF
Sbjct: 121 PNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNDDGYTSGSSPSF 180

Query: 181 DGNFNNCHVSSWW 194
           DGNFNNCHVSSWW
Sbjct: 181 DGNFNNCHVSSWW 193

BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DZB3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_001250 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.800e-24
Identity = 96/213 (45.07%), Postives = 117/213 (54.93%), Query Frame = 1

		  

Query: 1   MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTT-TTA 60
           M DG GECCIARWG  H  +          NTSKMDMIMLKFRPIAPKPV         A
Sbjct: 1   MGDGNGECCIARWGDSHVTSGY--------NTSKMDMIMLKFRPIAPKPVSGNIAVGEAA 60

Query: 61  SESGGGSQGNGSSRHAKAGGRGRKKTNN-------------SCSNNRKCNNNNNHGRKRK 120
           S+S GG    G++   +   +  K+ NN             S S+NR+CNNN   GRKRK
Sbjct: 61  SQSNGGRHAKGATGSGRGRRKSSKENNNNNNNNSPGGSGTGSGSSNRRCNNN---GRKRK 120

Query: 121 SSSPDRRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNN- 180
           SSSPD +      N  + D TLLPLFPEAPDLSP+   +        +N   ++NNN+N 
Sbjct: 121 SSSPDHQK-----NDEKTDLTLLPLFPEAPDLSPSNTPK--------NNNQVHSNNNSNM 180

Query: 181 ----NNNYDG-YTSGSSPSFDGNFNNCHVSSWW 194
               N N+D    S +S SF+ N+N CH SSWW
Sbjct: 181 PFSLNFNFDDQIVSSTSFSFENNYNQCH-SSWW 188

BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: W9RQK9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006905 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.800e-10
Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 1

		  

Query: 3   DGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASES 62
           DG+G CCIAR+ GG             C+ SK+D IML+FRPIAPKPV AG  + T + +
Sbjct: 2   DGRGGCCIARYSGGEVYG---------CDMSKVDRIMLRFRPIAPKPVAAGDGSGTGART 61

Query: 63  GGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAG--- 122
               +  G SR    GGRG+++       N++CNN NN   K++ +SPD  +   +G   
Sbjct: 62  ---EKNEGQSR----GGRGKRRYARD-GGNKRCNNGNN---KKRRASPDHHDQKRSGALV 121

Query: 123 NPNQQDP---TLLPLFPEAPDLSPTGQDQVHNVMPFWHNID 158
           + +Q D    TLLPL PE P+      D V +  P W + D
Sbjct: 122 SDHQDDQTVVTLLPLLPETPEPKEQRSDPV-SPPPTWLSFD 141

BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNQ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163620 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.800e-7
Identity = 66/181 (36.46%), Postives = 86/181 (47.51%), Query Frame = 1

		  

Query: 4   GKGECCIARWGGGHTAAVVATAAEDYCN---TSKMDMIMLKFRPIAPKPVVAGTTTTTAS 63
           G G CCIA++G  H         ++Y N    SKMD IML+FRPIAPKPV  GTTTTT S
Sbjct: 7   GGGGCCIAQYGHHHGPT------QNYYNPYDASKMDRIMLRFRPIAPKPVPGGTTTTTTS 66

Query: 64  ---------ESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPD 123
                         S   G  R++ A G G KK   SCS +   + NNN+ +K  +SS +
Sbjct: 67  TTTTTTTTTNDTSMSSRRGKKRNSAATGTGGKKKRKSCSPD---DTNNNNNKKCDASSSN 126

Query: 124 RRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQV------HNVMPFWHNIDCYNNNNNN 167
                       +    LPL PE PDLSP   +QV       +  P W    C+ +++  
Sbjct: 127 ----------GCKVTVTLPLLPETPDLSPRKNNQVGLGQSKSSPEPMWL---CFGSSDQT 165

BLAST of Spo26473.1 vs. TAIR (Arabidopsis)
Match: AT5G63350.1 (unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.800e-7
Identity = 53/157 (33.76%), Postives = 72/157 (45.86%), Query Frame = 1

		  

Query: 3   DGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASES 62
           DG+G CCIAR+GG                 SK D IML+FRPIAPKP   G + +   +S
Sbjct: 2   DGRGGCCIARYGG----------YGGRYGLSKADRIMLRFRPIAPKPASDGGSVSLTGKS 61

Query: 63  GG-GSQGNGSSRHAKAGGRGRKKTNNSCS--NNRKCNNNNNHGRKRKSSSPDRRNDYPAG 122
           G   +   GSS  +   GRG++K    CS  N+R+CN      +K++  S D        
Sbjct: 62  GSTTTTSGGSSDLSGKSGRGKRKYQKDCSGGNSRRCN------KKKRDLSGD------TA 121

Query: 123 NPNQQDPTLLPLFPEA---PDLSPTGQDQVHNVMPFW 154
                  +LLP  PE    PDL+    ++     P W
Sbjct: 122 TTTAVTLSLLPETPEKRVFPDLNAFPVEKQKRNGPLW 136

The following BLAST results are available for this feature:
BLAST of Spo26473.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902201240|gb|KNA13945.1|4.0e-10499.4hypothetical protein SOVF_1120... [more]
gi|731372247|ref|XP_010666288.1|4.1e-2445.0PREDICTED: uncharacterized pro... [more]
gi|703132615|ref|XP_010105167.1|2.6e-1038.5hypothetical protein L484_0069... [more]
gi|1009130496|ref|XP_015882332.1|4.4e-1040.8PREDICTED: uncharacterized pro... [more]
gi|902173920|gb|KNA08323.1|2.6e-736.4hypothetical protein SOVF_1636... [more]
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BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
A0A0K9R362_SPIOL2.8e-10499.4Uncharacterized protein OS=Spi... [more]
A0A0J8DZB3_BETVU2.8e-2445.0Uncharacterized protein OS=Bet... [more]
W9RQK9_9ROSA1.8e-1038.5Uncharacterized protein OS=Mor... [more]
A0A0K9QNQ3_SPIOL1.8e-736.4Uncharacterized protein OS=Spi... [more]
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BLAST of Spo26473.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26473.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G63350.14.8e-733.7unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33595FAMILY NOT NAMEDcoord: 3..167
score: 9.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006000 fructose metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0046950 cellular ketone body metabolic process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0006811 ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0006396 RNA processing
biological_process GO:0006417 regulation of translation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006012 galactose metabolic process
biological_process GO:0010017 red or far-red light signaling pathway
biological_process GO:0006574 valine catabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0008152 metabolic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0009615 response to virus
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0050896 response to stimulus
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006566 threonine metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0032259 methylation
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0048522 positive regulation of cellular process
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0017148 negative regulation of translation
biological_process GO:1902358 sulfate transmembrane transport
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009845 seed germination
biological_process GO:0010214 seed coat development
biological_process GO:0030259 lipid glycosylation
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0015843 methylammonium transport
biological_process GO:0072488 ammonium transmembrane transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0030154 cell differentiation
biological_process GO:0048608 reproductive structure development
biological_process GO:0009611 response to wounding
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0015031 protein transport
biological_process GO:0007165 signal transduction
biological_process GO:0030029 actin filament-based process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0009605 response to external stimulus
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042545 cell wall modification
biological_process GO:0045490 pectin catabolic process
biological_process GO:0009411 response to UV
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009414 response to water deprivation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0009725 response to hormone
biological_process GO:0001101 response to acid chemical
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
biological_process GO:0006580 ethanolamine metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:1901642 nucleoside transmembrane transport
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009651 response to salt stress
biological_process GO:0006950 response to stress
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0009409 response to cold
biological_process GO:0009737 response to abscisic acid
biological_process GO:0046482 para-aminobenzoic acid metabolic process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0035556 intracellular signal transduction
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005945 6-phosphofructokinase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0044428 nuclear part
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000151 ubiquitin ligase complex
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005777 peroxisome
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005634 nucleus
cellular_component GO:0005730 nucleolus
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005622 intracellular
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009507 chloroplast
cellular_component GO:0000785 chromatin
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0016829 lyase activity
molecular_function GO:0003872 6-phosphofructokinase activity
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0016161 beta-amylase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0020037 heme binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046592 polyamine oxidase activity
molecular_function GO:0038023 signaling receptor activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0016920 pyroglutamyl-peptidase activity
molecular_function GO:0010174 nucleoside transmembrane transporter activity, against a concentration gradient
molecular_function GO:0005215 transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0004047 aminomethyltransferase activity
molecular_function GO:0030598 rRNA N-glycosylase activity
molecular_function GO:0008271 secondary active sulfate transmembrane transporter activity
molecular_function GO:0016906 sterol 3-beta-glucosyltransferase activity
molecular_function GO:0008519 ammonium transmembrane transporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004419 hydroxymethylglutaryl-CoA lyase activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0022857 transmembrane transporter activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo271300.81Barchart | Table
Spo012300.78Barchart | Table
Spo055830.76Barchart | Table
Spo256890.76Barchart | Table
Spo107380.75Barchart | Table
Spo099340.75Barchart | Table
Spo216170.75Barchart | Table
Spo160150.75Barchart | Table
Spo016970.74Barchart | Table
Spo172030.74Barchart | Table
Spo130900.73Barchart | Table
Spo050670.73Barchart | Table
Spo221960.73Barchart | Table
Spo160560.73Barchart | Table
Spo068520.73Barchart | Table
Spo150310.73Barchart | Table
Spo156910.72Barchart | Table
Spo144730.72Barchart | Table
Spo122400.72Barchart | Table
Spo047900.72Barchart | Table
Spo157070.72Barchart | Table
Spo091800.71Barchart | Table
Spo178650.71Barchart | Table
Spo149480.71Barchart | Table
Spo107650.70Barchart | Table
Spo011740.70Barchart | Table
Spo101420.70Barchart | Table
Spo213500.70Barchart | Table
Spo208910.69Barchart | Table
Spo022380.69Barchart | Table
Spo056980.69Barchart | Table
Spo060120.69Barchart | Table
Spo230780.69Barchart | Table
Spo010930.69Barchart | Table
Spo078130.69Barchart | Table
Spo082890.69Barchart | Table
Spo083090.69Barchart | Table
Spo092150.69Barchart | Table
Spo119410.69Barchart | Table
Spo136150.69Barchart | Table
Spo136430.69Barchart | Table
Spo128900.68Barchart | Table
Spo114160.68Barchart | Table
Spo171970.68Barchart | Table
Spo174210.68Barchart | Table
Spo217490.68Barchart | Table
Spo220000.68Barchart | Table
Spo228790.68Barchart | Table
Spo267390.68Barchart | Table
Spo011070.68Barchart | Table
Spo213780.68Barchart | Table
Spo128890.68Barchart | Table
Spo069730.67Barchart | Table
Spo017960.67Barchart | Table
Spo039220.67Barchart | Table
Spo039850.67Barchart | Table
Spo043920.67Barchart | Table
Spo098210.67Barchart | Table
Spo243920.67Barchart | Table
Spo269210.67Barchart | Table
Spo043910.66Barchart | Table
Spo138660.66Barchart | Table
Spo259290.66Barchart | Table
Spo122890.66Barchart | Table
Spo023540.66Barchart | Table
Spo300010.66Barchart | Table
Spo171990.66Barchart | Table
Spo163160.66Barchart | Table
Spo113990.66Barchart | Table
Spo160020.66Barchart | Table
Spo113970.66Barchart | Table
Spo160910.66Barchart | Table
Spo112010.66Barchart | Table
Spo159670.66Barchart | Table
Spo060640.66Barchart | Table
Spo241560.66Barchart | Table
Spo211940.66Barchart | Table
Spo246770.66Barchart | Table
Spo083370.65Barchart | Table
Spo200430.65Barchart | Table
Spo113980.65Barchart | Table
Spo221710.65Barchart | Table
Spo172380.65Barchart | Table
Spo015330.65Barchart | Table
Spo258000.65Barchart | Table
Spo265200.65Barchart | Table