Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA ATGGAAGATGGAAAGGGGGAGTGTTGTATAGCGAGGTGGGGCGGCGGACATACGGCGGCGGTTGTAGCGACGGCGGCGGAGGATTATTGCAACACGTCCAAAATGGATATGATAATGCTTAAGTTCCGACCTATTGCTCCGAAGCCGGTTGTAGCAGGGACGACTACTACAACGGCTTCGGAGAGTGGTGGCGGCAGTCAAGGAAATGGAAGCAGCCGCCATGCGAAAGCAGGCGGCCGAGGACGGAAGAAAACCAATAATAGTTGCAGTAACAATAGAAAGTGCAACAACAATAATAACCATGGTAGGAAGAGAAAATCTAGTTCTCCCGATCGGAGAAATGATTATCCCGCTGGTAACCCTAACCAACAGGATCCAACACTACTTCCTTTGTTCCCTGAAGCACCTGATCTTAGCCCGACAGGCCAAGATCAGGTGCACAATGTTATGCCATTCTGGCATAACATCGATTGTTACAATAATAATAATAATAATAACAACAACTATGATGGCTACACAAGTGGTAGTAGCCCTTCTTTTGATGGTAATTTCAACAATTGCCATGTAAGTAGCTGGTGGTAA MEDGKGECCIARWGGGHTAAVVATAAEDYCNTSKMDMIMLKFRPIAPKPVVAGTTTTTASESGGGSQGNGSSRHAKAGGRGRKKTNNSCSNNRKCNNNNNHGRKRKSSSPDRRNDYPAGNPNQQDPTLLPLFPEAPDLSPTGQDQVHNVMPFWHNIDCYNNNNNNNNNYDGYTSGSSPSFDGNFNNCHVSSWW Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|902201240|gb|KNA13945.1| (hypothetical protein SOVF_112000 [Spinacia oleracea]) HSP 1 Score: 386.0 bits (990), Expect = 4.000e-104 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|731372247|ref|XP_010666288.1| (PREDICTED: uncharacterized protein DDB_G0283357-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 120.2 bits (300), Expect = 4.100e-24 Identity = 96/213 (45.07%), Postives = 117/213 (54.93%), Query Frame = 1
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|703132615|ref|XP_010105167.1| (hypothetical protein L484_006905 [Morus notabilis]) HSP 1 Score: 74.3 bits (181), Expect = 2.600e-10 Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 1
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|1009130496|ref|XP_015882332.1| (PREDICTED: uncharacterized protein LOC107418172 [Ziziphus jujuba]) HSP 1 Score: 73.6 bits (179), Expect = 4.400e-10 Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = 1
BLAST of Spo26473.1 vs. NCBI nr
Match: gi|902173920|gb|KNA08323.1| (hypothetical protein SOVF_163620 [Spinacia oleracea]) HSP 1 Score: 64.3 bits (155), Expect = 2.600e-7 Identity = 66/181 (36.46%), Postives = 86/181 (47.51%), Query Frame = 1
BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R362_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112000 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 2.800e-104 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1
BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DZB3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_001250 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.800e-24 Identity = 96/213 (45.07%), Postives = 117/213 (54.93%), Query Frame = 1
BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: W9RQK9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006905 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.800e-10 Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 1
BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNQ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163620 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.800e-7 Identity = 66/181 (36.46%), Postives = 86/181 (47.51%), Query Frame = 1
BLAST of Spo26473.1 vs. TAIR (Arabidopsis)
Match: AT5G63350.1 (unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 4.800e-7 Identity = 53/157 (33.76%), Postives = 72/157 (45.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26473.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26473.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 4
BLAST of Spo26473.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo26473.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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