Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAGTAGTAAGTATAAGTTGTATATTCATATCTTTTGTTAAATATGGTTCAAATATTTAAAGGAGAAATAAATATACCCGAAGTTCCATATATAATATGGACATACGGTGTATATTTAAGAGCTCGTACCATACATAAGGGCCCCTTTGGAGCACTTTTATCGCGATTCGCCCTGAGCTCCTAAAATATCAGGATCGACCCTGTCCATTTCCACCATTTATTACGTGCTACCATACAGACCGTTAAGGTACAAAGTAATAATGAAGTCGCTCTATTTTTATTTCATCAAAAGTTCAAAACTAAAATCTAGGTAAAATAATCTTTTTATGTTTCTCCTTCAACATATGTGGGCCCGTATAATCGTAGTCCACATAAAGGAAAATGTCATTGAAGGAGGGCGAAAACAGAATTAAAGAAAAGCAACGAAAAATTGACTTGAAAACTCAGAACGTAGTGAAGTAAGCAACCTCTCATAAGCTTACCTACCTCCTTTGCCTTTGAATGTTAGGTACCACTCTATTTATATTTCACTCATTTTGTAACATTCAACTTCTTTAATACAAGCATCATTTACTTTACATACTCCTTCATCAATCGTTAATCTCTTCTCAATTCTACGATAATCAGTAAGTACTTCTGTTTAATCTCCTGATTTACTAGATTTTCGTTTTATTTATTTGTTTTTATTTATGTTTTCAATGTGATAAAGACTGTCCAAAGTTCAAGTTGTTCATCATTAATGATATTTTATTATTAATCATACTTACACACACCATTTATGTGTCTATGTTAATACTCTTGGTTCATTTGTATGAATGACATGGCATCTTGTAATCTTGTTAAGTGTATCAATATAGTGGAGATGTCGTATGACCATTATTTAAGGGAAGTTTTTTACAAATCCGATCCTCTGATCCGTGGATCATTACTAGATTGTTTGATTGAAGGTTTGCTTAAAACCCCAAGTTGGATCTTTTCAAGTTATTTATAAACAACCTTAACTAAATAAATTTGTTAAAACGGTCCTGAATTTTACTTATGTTCAATCAACCCCCATATATATAAAAGGAATATTTAAATGAACAAATAAATTTAAAAAATATTGAGTGGTTGTTTACATAACTACACTACACTATAGGTCGAGTTTGTGTTGAGATAAGTGCGCGTGTGCCAATGTCAACTAGTCTAACTGAGCTGATAAAATATCTGAATGGGTATCCAAAAACTTTGGATCTGAGTCTTTTATATACGGATCCAGTGTCCCTTACGACTTTCTATGCATGTAAATAGTAGGTACCTTAAGTCCTAAATTCCAATTGTATCCATAAATTGTAGTACGTGACTAGGTGTTGGTGCATTATGTGGATGAAAAGAGTAACAAAAACTTGATACCCTTTGTTTTTGAATGGTATGACTAATTAGATTATTTACTGATGATGCAGTGGGAAACGATGTAATAGTGGATGATATTGCTTTTGCTCCTCAAGTTACATTAACCAAATCGCTACCCCTCTTGGGTTATGGTAAGAGATTCAACTTAATCAAGCTTGATTGTATTATTACTGATCAAGAATTTATTTGAACAAAACTAACTTGTTTCCTGAATTATTTTGACTTAATCGCGTAAACCAATTTACATACATAGGATGATCCTGTCCAAAGTTTTCATGAGATTCTTATCAATCCATATTAGAAATCAACTGAAAGCATTCATAAGAATATCAATCCGTTTAGATGGTGAAATTGCTTTAGTAGTTGTTAAGTGTGGTACGAAAAGTGAGCGTTCTGTTATGGTTATGGACTGAACAGGGTGCACAGAACTTGAAATCCACTTCCTGCAAATAAAGTTCACAGCAATTGGAGTGTACATGGAGAGGGAAGTGGTACAACACTTGCAGAAATGGAAGGGTAAATCAGGAAAGGAGCTCGCCGATGATGATGATTTCTTTGATGCTCTTACTGCTGGTAAAACCAGTAGCATTTTTATTTTATATTTACTCCTACATTTATCAAGTTCAGAACAATGCTGATGTAGGTTGTTGTGAATATTTTGTGCAGCCCCTGTGGAAACAGTAATTAAAGCTGTGGTGATCAAAGAAATTAAGGCTTCACAATTAGGCACACAGCTGGAGGGTTCAGTAAGGGACCGATTGGCAGCTGCAGACAAGTATGAAGAAGAGGAAGAAGCTGCACTTGAGAAGGTTGCCGAGTTCTTCCCCACCAAATACCTTAAGAAAGACTCTTTCTTCACTTTCAGCTTCTTTGCTTCAGGCACAGCTCAGGTTAACTTGTTATTCATTTATCCTTGAAGAATTCAACTCCATATAAGTAAGGTCAGTCAGCTGTTAACAGATATTCGAATTTTATTGACAGATAACTATCACCACGGATGAGAAAGAAGAAACAACGACAGCCGTGGAGAACAAAAATGTGGTGGAGATGATAAAGAAATGGTATTTAGGTGGAAGCAGGTCAGTGACTCCTTCGACTATAGAGTGCTTGTGTAACAACCTCTCAGCCGAGTTATCCAACTGAATGTAATGTAATGCAAATGAGTGTAAAAGGATCCTATTCAGATTGTGCCCTGTTTTTAATCTCTGCTAATAATACATGTCCATGTCCTCTTTGGTAATAATAGAGTGATCTTTCGTTTTTATCATTGCTTTCTGACATACCATTTGAGGCGATATCGGACAGGAATGGTAGTGTTTTCTGAGTTAGTACTAATACTAGTATATAGAAAATCAAGTATCACTTGATCCATATAGAATCCAAAAACATAACACCAGAGTGTGACCATAGCCGATTCAACCCAAACAAACCCAACCCGGACAATGAATTTTCCAC ATGGAGAAAGTACATCATTTACTTTACATACTCCTTCATCAATCGTTAATCTCTTCTCAATTCTACGATAATCAATTATTTACTGATGATGCAGTGGGAAACGATGTAATAGTGGATGATATTGCTTTTGCTCCTCAAGTTACATTAACCAAATCGCTACCCCTCTTGGGTTATGGGTGCACAGAACTTGAAATCCACTTCCTGCAAATAAAGTTCACAGCAATTGGAGTGTACATGGAGAGGGAAGTGGTACAACACTTGCAGAAATGGAAGGGTAAATCAGGAAAGGAGCTCGCCGATGATGATGATTTCTTTGATGCTCTTACTGCTGCCCCTGTGGAAACAGTAATTAAAGCTGTGGTGATCAAAGAAATTAAGGCTTCACAATTAGGCACACAGCTGGAGGGTTCAGTAAGGGACCGATTGGCAGCTGCAGACAAGTATGAAGAAGAGGAAGAAGCTGCACTTGAGAAGGTTGCCGAGTTCTTCCCCACCAAATACCTTAAGAAAGACTCTTTCTTCACTTTCAGCTTCTTTGCTTCAGGCACAGCTCAGATAACTATCACCACGGATGAGAAAGAAGAAACAACGACAGCCGTGGAGAACAAAAATGTGGTGGAGATGATAAAGAAATGGTATTTAGGTGGAAGCAGGTCAGTGACTCCTTCGACTATAGAGTGCTTGTGTAACAACCTCTCAGCCGAGTTATCCAACTGAATGTAATGTAATGCAAATGAGTGTAAAAGGATCCTATTCAGATTGTGCCCTGTTTTTAATCTCTGCTAATAATACATGTCCATGTCCTCTTTGGTAATAATAGAGTGATCTTTCGTTTTTATCATTGCTTTCTGACATACCATTTGAGGCGATATCGGACAGGAATGGTAGTGTTTTCTGAGTTAGTACTAATACTAGTATATAGAAAATCAAGTATCACTTGATCCATATAGAATCCAAAAACATAACACCAGAGTGTGACCATAGCCGATTCAACCCAAACAAACCCAACCCGGACAATGAATTTTCCAC ATGGAGAAAGTACATCATTTACTTTACATACTCCTTCATCAATCGTTAATCTCTTCTCAATTCTACGATAATCAATTATTTACTGATGATGCAGTGGGAAACGATGTAATAGTGGATGATATTGCTTTTGCTCCTCAAGTTACATTAACCAAATCGCTACCCCTCTTGGGTTATGGGTGCACAGAACTTGAAATCCACTTCCTGCAAATAAAGTTCACAGCAATTGGAGTGTACATGGAGAGGGAAGTGGTACAACACTTGCAGAAATGGAAGGGTAAATCAGGAAAGGAGCTCGCCGATGATGATGATTTCTTTGATGCTCTTACTGCTGCCCCTGTGGAAACAGTAATTAAAGCTGTGGTGATCAAAGAAATTAAGGCTTCACAATTAGGCACACAGCTGGAGGGTTCAGTAAGGGACCGATTGGCAGCTGCAGACAAGTATGAAGAAGAGGAAGAAGCTGCACTTGAGAAGGTTGCCGAGTTCTTCCCCACCAAATACCTTAAGAAAGACTCTTTCTTCACTTTCAGCTTCTTTGCTTCAGGCACAGCTCAGATAACTATCACCACGGATGAGAAAGAAGAAACAACGACAGCCGTGGAGAACAAAAATGTGGTGGAGATGATAAAGAAATGGTATTTAGGTGGAAGCAGGTCAGTGACTCCTTCGACTATAGAGTGCTTGTGTAACAACCTCTCAGCCGAGTTATCCAACTGA MEKVHHLLYILLHQSLISSQFYDNQLFTDDAVGNDVIVDDIAFAPQVTLTKSLPLLGYGCTELEIHFLQIKFTAIGVYMEREVVQHLQKWKGKSGKELADDDDFFDALTAAPVETVIKAVVIKEIKASQLGTQLEGSVRDRLAAADKYEEEEEAALEKVAEFFPTKYLKKDSFFTFSFFASGTAQITITTDEKEETTTAVENKNVVEMIKKWYLGGSRSVTPSTIECLCNNLSAELSN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26569.1 vs. NCBI nr
Match: gi|731320056|ref|XP_010670602.1| (PREDICTED: probable chalcone--flavonone isomerase 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 354.4 bits (908), Expect = 1.600e-94 Identity = 179/206 (86.89%), Postives = 194/206 (94.17%), Query Frame = 1
BLAST of Spo26569.1 vs. NCBI nr
Match: gi|870865722|gb|KMT16760.1| (hypothetical protein BVRB_2g042450 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 345.5 bits (885), Expect = 7.300e-92 Identity = 175/201 (87.06%), Postives = 189/201 (94.03%), Query Frame = 1
BLAST of Spo26569.1 vs. NCBI nr
Match: gi|816196829|dbj|BAR72208.1| (enhancer of flavonoid production [Dianthus caryophyllus]) HSP 1 Score: 319.3 bits (817), Expect = 5.600e-84 Identity = 163/204 (79.90%), Postives = 181/204 (88.73%), Query Frame = 1
BLAST of Spo26569.1 vs. NCBI nr
Match: gi|902226877|gb|KNA20513.1| (hypothetical protein SOVF_051680 [Spinacia oleracea]) HSP 1 Score: 307.4 bits (786), Expect = 2.200e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo26569.1 vs. NCBI nr
Match: gi|444475579|gb|AGE10598.1| (chalcone isomerase [Lonicera japonica]) HSP 1 Score: 268.5 bits (685), Expect = 1.100e-68 Identity = 137/207 (66.18%), Postives = 169/207 (81.64%), Query Frame = 1
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSJ0_BETVU (Chalcone-flavonone isomerase family protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042450 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 5.100e-92 Identity = 175/201 (87.06%), Postives = 189/201 (94.03%), Query Frame = 1
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLZ4_SPIOL (Chalcone-flavonone isomerase family protein OS=Spinacia oleracea GN=SOVF_051680 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.500e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Match: L7Z972_LONJA (Chalcone-flavonone isomerase family protein OS=Lonicera japonica GN=CHI1 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 8.000e-69 Identity = 137/207 (66.18%), Postives = 169/207 (81.64%), Query Frame = 1
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Match: A0A0A1G7T9_9ERIC (Chalcone-flavonone isomerase family protein OS=Actinidia chrysantha GN=CHI PE=3 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.900e-68 Identity = 138/203 (67.98%), Postives = 163/203 (80.30%), Query Frame = 1
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Match: T2DL26_ACTCH (Chalcone-flavonone isomerase family protein OS=Actinidia chinensis PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.000e-67 Identity = 136/203 (67.00%), Postives = 162/203 (79.80%), Query Frame = 1
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Match: CFI3_ARATH (Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana GN=CHI3 PE=1 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.900e-55 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 1
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.000e-14 Identity = 62/205 (30.24%), Postives = 96/205 (46.83%), Query Frame = 1
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.200e-12 Identity = 62/201 (30.85%), Postives = 94/201 (46.77%), Query Frame = 1
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Match: CFI_EUSER (Chalcone--flavonone isomerase OS=Eustoma exaltatum subsp. russellianum GN=CHI PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-12 Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 1
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.800e-12 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 1
BLAST of Spo26569.1 vs. TAIR (Arabidopsis)
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein) HSP 1 Score: 217.2 bits (552), Expect = 1.100e-56 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 1
BLAST of Spo26569.1 vs. TAIR (Arabidopsis)
Match: AT3G55120.1 (Chalcone-flavanone isomerase family protein) HSP 1 Score: 62.4 bits (150), Expect = 4.400e-10 Identity = 61/206 (29.61%), Postives = 87/206 (42.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26569.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26569.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26569.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26569.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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