Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCATACAGGTTAAAAGGTAAGGTCGCAATCATAACAGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGTAGTTTCTTAGGAGCTAAGCATGCAGGGAGAGCAATGATTCAGGGTAAGTCCGGTGTAATACTCTTTACGTCTAGCATTGCTGCAATTACCNCTGCGACACCACACAAATCCTCATCGCCGAATCAATTTCTCCTGCGAAATTAAATAATATTTTTCCCTCGTACATCAGAAATCTAGGATCCTCTAACCTAAAAACCTAAAAAAAATTATCCCTAGAAAGAAAAGAAAAACCATATATTTTGAGGGAGAAAGTTCCCCGCACAAGGAGGAAGTATTATTAGAACCCTAAAAAAACAAACAAAATTAAAGAAAAACACCAAAAAAAGAAAAGATTAGGGCTTTTCATCCGATAAAATCAATGAAAGCCCTTCGAAATTCGATAATGGGGCTTGAGAGAGGTAGAGGAGGGGGAGAGCACATGTTATTTATATTATTAATAATTTTGAAGAAATGATTATCGTTAAAAAATAAATAACTTTTATATATAGAGTAATTTTTAAGCATTTTAAATTAACTTTTATGTCGGAGTATAATATTTATTGTACACTGCTTGTAAATAAAACTTTGTGATTTATTTTAACCCAAATTCGCAACGTCGCAACCAAAAAAAAAAAACCGAAGGTAATGAATGATTGGAAAAGGACAAGATGGATAAATATTTGATGATCTAATAATGTTGGAGGTTCGTATCCGCACAAAGGAGGGGATAAGAAGTGTTGTGCTACCAGATTAGTGTAATTGACTAATTGCTACACGGCATTTCATCCATCAATGGCTCCTCCTACGGCCCAAAGGTGCGAATTACTTCTATATATCTTACTTGCTCATTGTTGTCATTACATAAACACTTTACTTTGATTTGATCTACTCGTATTCCAATCACCTTTTTTTTTCAATAAGTACGTTGTCAAAAAAATTTCATATACGGAGTAGTTTTTTCTCATTATGTAGTTAGTTTCCATAGATAACATCCTGTGATTAATTTATACTTCCTCCATCTTCATTTACTTGCATCATTTGATGTGTCACGCTTGTCAATACAAAATATTTAGCCATTAGTATCTCTAATTATACATTACCTATCACTATAAAAGGTTAATATTTGAAAATATATATTGAGACAAATTTAACAAGATTCAATATGACTATATAACTTAATATGTAAAGCGATAAAAGAGATTGAGTAAATATTGTAAAATTGCAAATGGTTCAAGTAAAAAAAATCGAAAAAGCACATACTTCCTCAATTCCACAATAGATGCATCATTTCTCATTTGTGCACTATTCATCAATCAACTTTGACAACCTTTGTTTCACTGTTGTGTAAGAAAAAACATAGTCAAGTGAGATTTTGTTAAATTCGTATTAATGCAAGGATTTCAAATATCAATTTTTTATAATTTTTACTTATACGCATTTAGAGATATTAATGTTCAAATAAGCGCATTGGCATACGTGCAATGAGAAATGATGCATCTATTGTGGAACGGAGGAAGTACATAACATGTAACATGTACATAATTTATTCAATTTTTATATATTAATGTAAAATATTACGGAGTATTAACTAATTTTGATACAAATCCTTTTTTCTTTTTTTTTTACGGAATTTTGATACAAATCAATAGACAAGAGTCATTTAATTAATACGATTACTTAAGTGACCAGCAAAAAGAGTCATTTAGTGTTTGTCTTTTCTCTATTTTGTCGTTTTGTTGGCTGATATGTATTTTGTAATGGGTAGCTTTTGTGTAAGACCGTCTTACCGAAAAAACCACTTTGATTGTTTAACTAATTGGTTTCATTTTTTAACTAATTAGTTTCATTGTTTAACTAATTGGTTTCAATGCTTAACTAATTGATTTTATTGATTAACTTATATGACACAATGCGGTCTTTTGTGTAAGACTGCCTTATATAAAAGTTTGTATTTTGTAATACATTTATGATATTGGAATTTACTTCCTCAACTCTTTGGTATATATCATATGACTAGTAATCAATTATCAGTTAATTATGTGTCTCTTTAAAATAAAAATTGTATGATTAAAGTTCGCTGATTTACAGGGTTATTCAACATTAATTCAAATACATTATCGACGAGCTAATTGAATATGTGAGGCCACTAGTACTGTCGTACATACTAGCTAGTATACTACCTCTTTTTTTAAAATATGTTTACACTTACTATTTGTACAATGTTTGACTGTTCATATGTCCAATTTTGTACGACAAAAAATTATAAAAGTTTGATATTTATAAAATACATTTTGACACGAATTTTACAAGATATCTCATGATAATTTTTGATAGATATAATAGTGAGAATTTATGATCAAAGTTTTGATTATTGGACACGTTAATCAAAGTGTAAAAAATTTAATGAAACGGAGGTAGTACTACATAATAATCGTGCCCCACTAGACCAATCAATGTGCAGTGCTTACTACTACTAGTATATCCGTATAGCGGAAAATGATAAATCCAAGGAATAATTCACTTCATCCAAAGAAATCATCTTTGAAAAAATGTGGATTTCCTTGGAAGAAGTAAAAATTTCCTTGGATTTATCACTTCCCGTACAGCGTGTATCTATCTTTCCAGAAAATAGCAACAAAAAATAGTGTATTTGATCAATCAATATTTGATGGAAAATTTTGTTGACAAATTACACCGATGGATCCATACAGGTTAAAAGGTAAGGTCGCAATCATAACAGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGTAGTTTCTTAGGAGCTAAGCATGCAGGGAGAGCAATGATTCAGGGTAAGTCCGGTGTAATACTCTTTACGTCTAGCATTGCTGCAATTACCGCTGGGCAGGCACCACATGCATATACTGTGTCCAAACATGCAATTATTGGTTTAATGAAAAACTTGTGCGTTGAAATGGGTCAATATGGTATTAGGGTTAACGCGATTTCACCGGGTGCTGTTTCGACGCCATTAGCAATTAAAGCGTTAGGGATTGACAAGGACACAATGGATGGCTTGATTTCTGAATGTGCTGTGCTTAAAGGGGCTGCTCTTGAGGCGTTAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAGCTAAGTTTGTCACTGGTGCTAATTTTGTTCTTGATGGTGGCTATACCCTTCCTAATCCAACTTTCTCCATGGCTGTCGAGGAATCTTTAGGACGTACTTCACATTAA ATGGATCCATACAGGTTAAAAGGTAAGGTCGCAATCATAACAGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGTAGTTTCTTAGGAGCTAAGCATGCAGGGAGAGCAATGATTCAGGGTAAGTCCGGTGTAATACTCTTTACGTCTAGCATTGCTGCAATTACCGCTGGGCAGGCACCACATGCATATACTGTGTCCAAACATGCAATTATTGGTTTAATGAAAAACTTGTGCGTTGAAATGGGTCAATATGGTATTAGGGTTAACGCGATTTCACCGGGTGCTGTTTCGACGCCATTAGCAATTAAAGCGTTAGGGATTGACAAGGACACAATGGATGGCTTGATTTCTGAATGTGCTGTGCTTAAAGGGGCTGCTCTTGAGGCGTTAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAGCTAAGTTTGTCACTGGTGCTAATTTTGTTCTTGATGGTGGCTATACCCTTCCTAATCCAACTTTCTCCATGGCTGTCGAGGAATCTTTAGGACGTACTTCACATTAA ATGGATCCATACAGGTTAAAAGGTAAGGTCGCAATCATAACAGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGAGGAGCAAGTGGGTTCGGTAAGACCACAGCGGAACTCTTTGTTGAACACGGCGCCAAAGTCGTAATCGCAGATGTTCAAGACGAGTTAGGCCTTTCTTTGTGCAACCAAATAATTACTTGGTTCAACAACAACGACAATGATGACGAAGAACTAATCAGTTACACTCATTGTGATATTTCTAATGAGAATGACGTGAAAGATCTCGTTGATTTCACCATTGCTAAACACGGAAAACTCGATATCATGTTCAACAATGCTGGCATATTCGGAGACCCAAACCCGTCAATTTTAACAACCACAAATGAAAACTTTAAAAGAGTGTTCGAAACAAATGTGTATGGTAGTTTCTTAGGAGCTAAGCATGCAGGGAGAGCAATGATTCAGGGTAAGTCCGGTGTAATACTCTTTACGTCTAGCATTGCTGCAATTACCGCTGGGCAGGCACCACATGCATATACTGTGTCCAAACATGCAATTATTGGTTTAATGAAAAACTTGTGCGTTGAAATGGGTCAATATGGTATTAGGGTTAACGCGATTTCACCGGGTGCTGTTTCGACGCCATTAGCAATTAAAGCGTTAGGGATTGACAAGGACACAATGGATGGCTTGATTTCTGAATGTGCTGTGCTTAAAGGGGCTGCTCTTGAGGCGTTAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAGCTAAGTTTGTCACTGGTGCTAATTTTGTTCTTGATGGTGGCTATACCCTTCCTAATCCAACTTTCTCCATGGCTGTCGAGGAATCTTTAGGACGTACTTCACATTAA MDPYRLKGKVAIITGGASGFGKTTAELFVEHGAKVVIADVQDELGLSLCNQIITWFNNNDNDDEELISYTHCDISNENDVKDLVDFTIAKHGKLDIMFNNAGIFGDPNPSILTTTNENFKRVFETNVYGGASGFGKTTAELFVEHGAKVVIADVQDELGLSLCNQIITWFNNNDNDDEELISYTHCDISNENDVKDLVDFTIAKHGKLDIMFNNAGIFGDPNPSILTTTNENFKRVFETNVYGSFLGAKHAGRAMIQGKSGVILFTSSIAAITAGQAPHAYTVSKHAIIGLMKNLCVEMGQYGIRVNAISPGAVSTPLAIKALGIDKDTMDGLISECAVLKGAALEALDVANAALFLASDEAKFVTGANFVLDGGYTLPNPTFSMAVEESLGRTSH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26598.1 vs. NCBI nr
Match: gi|902230686|gb|KNA21954.1| (hypothetical protein SOVF_038590 [Spinacia oleracea]) HSP 1 Score: 521.9 bits (1343), Expect = 9.500e-145 Identity = 264/270 (97.78%), Postives = 267/270 (98.89%), Query Frame = 1
BLAST of Spo26598.1 vs. NCBI nr
Match: gi|902192214|gb|KNA11984.1| (hypothetical protein SOVF_130040 isoform A [Spinacia oleracea]) HSP 1 Score: 373.2 bits (957), Expect = 5.500e-100 Identity = 187/268 (69.78%), Postives = 227/268 (84.70%), Query Frame = 1
BLAST of Spo26598.1 vs. NCBI nr
Match: gi|731344857|ref|XP_010683629.1| (PREDICTED: secoisolariciresinol dehydrogenase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 366.7 bits (940), Expect = 5.100e-98 Identity = 186/266 (69.92%), Postives = 223/266 (83.83%), Query Frame = 1
BLAST of Spo26598.1 vs. NCBI nr
Match: gi|902192215|gb|KNA11985.1| (hypothetical protein SOVF_130040 isoform B [Spinacia oleracea]) HSP 1 Score: 358.2 bits (918), Expect = 1.800e-95 Identity = 180/257 (70.04%), Postives = 218/257 (84.82%), Query Frame = 1
BLAST of Spo26598.1 vs. NCBI nr
Match: gi|902192213|gb|KNA11983.1| (hypothetical protein SOVF_130030 [Spinacia oleracea]) HSP 1 Score: 345.9 bits (886), Expect = 9.400e-92 Identity = 170/275 (61.82%), Postives = 216/275 (78.55%), Query Frame = 1
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSR2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038590 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 6.600e-145 Identity = 264/270 (97.78%), Postives = 267/270 (98.89%), Query Frame = 1
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXH6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130040 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.800e-100 Identity = 187/268 (69.78%), Postives = 227/268 (84.70%), Query Frame = 1
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3P3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g158510 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 3.600e-98 Identity = 186/266 (69.92%), Postives = 223/266 (83.83%), Query Frame = 1
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXK3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130040 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.300e-95 Identity = 180/257 (70.04%), Postives = 218/257 (84.82%), Query Frame = 1
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ60_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130030 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 6.500e-92 Identity = 170/275 (61.82%), Postives = 216/275 (78.55%), Query Frame = 1
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Match: SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum PE=1 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.200e-70 Identity = 135/266 (50.75%), Postives = 180/266 (67.67%), Query Frame = 1
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.000e-62 Identity = 123/258 (47.67%), Postives = 174/258 (67.44%), Query Frame = 1
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.700e-59 Identity = 129/256 (50.39%), Postives = 175/256 (68.36%), Query Frame = 1
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Match: TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca PE=2 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 6.800e-58 Identity = 126/267 (47.19%), Postives = 171/267 (64.04%), Query Frame = 1
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 7.500e-57 Identity = 126/269 (46.84%), Postives = 171/269 (63.57%), Query Frame = 1
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 212.2 bits (539), Expect = 5.700e-55 Identity = 120/263 (45.63%), Postives = 160/263 (60.84%), Query Frame = 1
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 211.5 bits (537), Expect = 9.700e-55 Identity = 115/256 (44.92%), Postives = 161/256 (62.89%), Query Frame = 1
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Match: AT1G52340.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 208.4 bits (529), Expect = 8.200e-54 Identity = 108/265 (40.75%), Postives = 161/265 (60.75%), Query Frame = 1
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 199.9 bits (507), Expect = 2.900e-51 Identity = 109/259 (42.08%), Postives = 161/259 (62.16%), Query Frame = 1
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 199.9 bits (507), Expect = 2.900e-51 Identity = 110/257 (42.80%), Postives = 160/257 (62.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26598.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26598.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26598.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26598.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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