Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATAACTGCAGGGATCACTACACTACTGCATTTGCCAGTTTGCTGGACTTTGGTCTTCAAATGTGGTCTTGGAAACCGAGGAGCTGCCCTTGCAACTGGTGTATCTTATTGGATTAATGTAATATTGTTAGCACTTTATGTTAAGTTTTCTTCTTCGTGCTAAAAAACTTGGACAAGTTTTTCTACTAAAGCTCTGCATGATTTACCTACAGTCGTCAGACTCAGTATTCCCCCTGCTTGTATGGTATGGTAAGTCCCTGGAGCCTGTAGCTTGCTTTTTGACACATAATAAAATTAAAACAAAGCATCGTATTGGTCCTTCTTTAATTTCTTCCTACAGTTTAGAAATGTGGTCATTTGAAATGATGTTCTCTTAGCTGGTCTTCTTCCCAACCCAACATTAGAAACATCCGCGCCGTCTATCAGGTATATATGTACAAGTTTAAGTTATACTTCATAAGAAACATTCAATATGAGCTGACGTTCCAAGATAATTAAGCAAATGGGATTATACCATCTGACTGCTGGTCCTCTTTTTTTTGCAGTCTCAACACAGCTGCACTTGTGTGGATGATCCCCTTTGCTCTTAGTGGTGCTGTCAGGTATTTTTCTCTTTTTCTTCTGATATTTGTGAGACTTGTTACCAAAATTACCTCTTGAAGTGAACTAAAAAATTAAATGTGGGTGTTCCTGCTAATGTTGCTGTCGGAATATCGCCATTAGGAGGGTCAATTTTTCCTGTTTCTTTGATCTTTCACTTTCACTTTCATAATTCCATTATTTCTATTTTTTTTTTATTTTGTTTGGTAATTTTCGAATTGAAATCCTGAGTTAGGGTTCCGAATTCTCCTTTTAATATGCGTTGTGGTGATTTTCAAATGAAATTTGTCACAGTTACGATGAAACCTCGGCTTTCAACTAATTTGAGTGCATAGCGTGTTTGTGTGTTGTGTCCTATAAGAATTTCTTACATATAGTGCACTTTCATGCAGTGAGGCTTAGCATTAAGTCCTTCAGAGTACCAGAGATTTTCATTGAGGTTCCGAATAGTACAACTGTTGGTTCACTCAAGGTATGCAACTGAGTTATGGTTTTGCAAGACCTGTATTTGGAAATTGTACTGACAGTTTAATTTTTTTTTTCCGGTATGTTTTTTTATTGATTGTGTTCTTGAGAATAAAGGAGGAGCTGACTAGGTTGAGGTTGAAAAATGTACACTAAGGCATAGGTTATTACATAAAAAAGGCATAGGTTGTTCTTGGATTTGGGTGGATATCCCAGGCTTTTAAGTCAATAATGAAAAACCTGTCGTGATTTTAAGGCTAAGTACAAAAATCTTAATTCTATTCAATCATCTGAATCAAGCTAGGCTCTTTGTTTTTTGCTGGAAAACTGAAAAGTAGTGGACAACTTAATGCACTCCATTAGGGATTTGGTTAGTTATATATGGTTTTGCAGCATGGTTGAAAGCTAGAGCTGGTTAAACATTAAAATTAGCAGTATCAGGTTAGCTTTGTTGGTAAACCTAATCTAATTAGGTTTGTGACACCATTCTTGCCATTAGTTCCAATCTTGTGTCATTTGATTTGAGCTTTTGGNTTAGGTTTGTGACACCATTCTTGCCATTAGTTCCAATCTTGTGTCATTTGATTTGAGCTTTTGGTTGTCCTTTCTTAACTAGGAGCATATTATAGTTTTATAGGAAGCTTACATTAGTAGTTATGTGTCATCTGTTTAAGCAACAATCTTATCATAATTCTGTTTTTTATGGAAGCAGGGCGTGCCAGAAGAAAGCTCACTGGGACAGTGA ATGATGATAACTGCAGGGATCACTACACTACTGCATTTGCCAGTTTGCTGGACTTTGGTCTTCAAATGTGGTCTTGGAAACCGAGGAGCTGCCCTTGCAACTGGTGTATCTTATTGGATTAATTCGTCAGACTCAGTATTCCCCCTGCTTGTATGGTATGTGGTGCTGTCAGTGAGGCTTAGCATTAAGTCCTTCAGAGTACCAGAGATTTTCATTGAGGTTCCGAATAGTACAACTGTTGGTTCACTCAAGGGCGTGCCAGAAGAAAGCTCACTGGGACAGTGA ATGATGATAACTGCAGGGATCACTACACTACTGCATTTGCCAGTTTGCTGGACTTTGGTCTTCAAATGTGGTCTTGGAAACCGAGGAGCTGCCCTTGCAACTGGTGTATCTTATTGGATTAATTCGTCAGACTCAGTATTCCCCCTGCTTGTATGGTATGTGGTGCTGTCAGTGAGGCTTAGCATTAAGTCCTTCAGAGTACCAGAGATTTTCATTGAGGTTCCGAATAGTACAACTGTTGGTTCACTCAAGGGCGTGCCAGAAGAAAGCTCACTGGGACAGTGA MMITAGITTLLHLPVCWTLVFKCGLGNRGAALATGVSYWINSSDSVFPLLVWYVVLSVRLSIKSFRVPEIFIEVPNSTTVGSLKGVPEESSLGQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26652.1 vs. NCBI nr
Match: gi|902206005|gb|KNA15338.1| (hypothetical protein SOVF_099140 isoform A, partial [Spinacia oleracea]) HSP 1 Score: 89.4 bits (220), Expect = 3.700e-15 Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 1
BLAST of Spo26652.1 vs. NCBI nr
Match: gi|902206006|gb|KNA15339.1| (hypothetical protein SOVF_099140 isoform B, partial [Spinacia oleracea]) HSP 1 Score: 89.4 bits (220), Expect = 3.700e-15 Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 1
BLAST of Spo26652.1 vs. NCBI nr
Match: gi|902172607|gb|KNA08147.1| (hypothetical protein SOVF_165200 isoform A, partial [Spinacia oleracea]) HSP 1 Score: 80.9 bits (198), Expect = 1.300e-12 Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1
BLAST of Spo26652.1 vs. NCBI nr
Match: gi|902172608|gb|KNA08148.1| (hypothetical protein SOVF_165200 isoform B, partial [Spinacia oleracea]) HSP 1 Score: 80.9 bits (198), Expect = 1.300e-12 Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1
BLAST of Spo26652.1 vs. NCBI nr
Match: gi|731334265|ref|XP_010678134.1| (PREDICTED: MATE efflux family protein 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-11 Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 1
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8N1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_099140 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.600e-15 Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 1
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R734_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_099140 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.600e-15 Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 1
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN86_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_165200 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.300e-13 Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLN6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_165200 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.300e-13 Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CC33_BETVU (Protein DETOXIFICATION OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g112090 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.900e-12 Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 1
BLAST of Spo26652.1 vs. ExPASy Swiss-Prot
Match: DTX15_ARATH (Protein DETOXIFICATION 15 OS=Arabidopsis thaliana GN=DTX15 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.200e-7 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
BLAST of Spo26652.1 vs. ExPASy Swiss-Prot
Match: DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.800e-7 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1
BLAST of Spo26652.1 vs. ExPASy Swiss-Prot
Match: DTX16_ARATH (Protein DETOXIFICATION 16 OS=Arabidopsis thaliana GN=DTX16 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.400e-7 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
BLAST of Spo26652.1 vs. ExPASy Swiss-Prot
Match: DTX14_ARATH (Protein DETOXIFICATION 14 OS=Arabidopsis thaliana GN=DTX14 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.400e-6 Identity = 21/41 (51.22%), Postives = 34/41 (82.93%), Query Frame = 1
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Match: AT2G34360.1 (MATE efflux family protein) HSP 1 Score: 56.2 bits (134), Expect = 1.200e-8 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Match: AT1G73700.1 (MATE efflux family protein) HSP 1 Score: 55.5 bits (132), Expect = 2.100e-8 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Match: AT5G52450.1 (MATE efflux family protein) HSP 1 Score: 54.3 bits (129), Expect = 4.700e-8 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Match: AT1G71140.1 (MATE efflux family protein) HSP 1 Score: 51.6 bits (122), Expect = 3.100e-7 Identity = 21/41 (51.22%), Postives = 34/41 (82.93%), Query Frame = 1
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Match: AT1G15150.1 (MATE efflux family protein) HSP 1 Score: 50.1 bits (118), Expect = 8.900e-7 Identity = 18/40 (45.00%), Postives = 30/40 (75.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26652.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26652.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26652.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo26652.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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